View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF14607_high_12 (Length: 292)
Name: NF14607_high_12
Description: NF14607
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF14607_high_12 |
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Alignment Details
Target: chr3 (Bit Score: 246; Significance: 1e-136; HSPs: 1)
Name: chr3
Description:
Target: chr3; HSP #1
Raw Score: 246; E-Value: 1e-136
Query Start/End: Original strand, 18 - 283
Target Start/End: Complemental strand, 44066017 - 44065752
Alignment:
| Q |
18 |
attagtcacttgagttcaatcacttgattaatattcttgtatttttctattgaatgaatttgtatttaccataaaaagtaaataaataaaaacttggggt |
117 |
Q |
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| T |
44066017 |
attagtcacttgagttcaatcacttggttaatattcttgtatttttctattgaatgaaattgtatttaccataaaaagtaaataaataaaaacttggggt |
44065918 |
T |
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| Q |
118 |
gcctgtaccactattaaacacatgcaccgtaccattagtcatcaataatatccacaaggatgatttatttgttgatatagatgtagagttatagcgtaga |
217 |
Q |
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||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||| ||||||| |||| |
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| T |
44065917 |
gcctgtaccactattaaacacatgcaccgtaccattagtcatcaataatattcacaaggatgatttatttgttgatatagatgtagaattatagcataga |
44065818 |
T |
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| Q |
218 |
aagcaagatatcatatccaaggccttagacacatatgccaaagactgacttcaatctctgtctgtg |
283 |
Q |
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|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
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| T |
44065817 |
aagcaagatatcatatccaaggccttagacacatatgccaaagactgacttcaatctctgtctgtg |
44065752 |
T |
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