View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF14607_high_9 (Length: 306)
Name: NF14607_high_9
Description: NF14607
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF14607_high_9 |
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Alignment Details
Target: chr7 (Bit Score: 268; Significance: 1e-149; HSPs: 1)
Name: chr7
Description:
Target: chr7; HSP #1
Raw Score: 268; E-Value: 1e-149
Query Start/End: Original strand, 1 - 290
Target Start/End: Complemental strand, 664142 - 663854
Alignment:
| Q |
1 |
ttctttcatt-ggaacccacattttgaaaagttctcttaggagagtaaaatcttataaagtttttcttgctaatataaaatcaaaagttccacactatct |
99 |
Q |
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| T |
664142 |
ttctttcatttggaacccacattttgaaaagttctcttaggagagtaaaatcttataaagtttttcttgctaatataaaatcaaaagttccacactatct |
664043 |
T |
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| Q |
100 |
tgttcttattattacaaccattttggctgtatccatcatctctcattcctttgtgtctggcattagattgaaagtagctttctcttattatataaggcag |
199 |
Q |
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|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||| |
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| T |
664042 |
tgttcttattattacaaccattttggctgtatccatcatctctcattcctttgtgtctggcattagattgaaagtagctttctcttat--tataaggcag |
663945 |
T |
|
| Q |
200 |
aagaaaaacactactagctagttccaaaagtatattctccttaacctatatattataaaaagaaaattaatgcaaaaactcgagaaggtgc |
290 |
Q |
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|||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
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| T |
663944 |
aagaaaaacactcctagctagttccaaaagtatattctccttaacctatatattataaaaagaaaattaatgcaaaaactcgagaaggtgc |
663854 |
T |
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