View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF14607_low_17 (Length: 317)
Name: NF14607_low_17
Description: NF14607
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF14607_low_17 |
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Alignment Details
Target: chr7 (Bit Score: 150; Significance: 3e-79; HSPs: 1)
Name: chr7
Description:
Target: chr7; HSP #1
Raw Score: 150; E-Value: 3e-79
Query Start/End: Original strand, 42 - 303
Target Start/End: Complemental strand, 664474 - 664210
Alignment:
| Q |
42 |
tcatcatagttgaagtcagtgttgaggcttaatatcctaggttgaaggatcgcagataaaagacataattttacgaaaagtacaaaaatgtactgtatta |
141 |
Q |
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| T |
664474 |
tcatcgtagttgaattcagtgttgaggcttaatatcctaggttgaaggattgcagataaaagacataattttacgaaaagtacaaaaatgtactgtgtta |
664375 |
T |
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| Q |
142 |
gttttatttat-gnnnnnnnnnaaggattattaatatgtgtaaattacgataaaatggcaattgttg---cnnnnnnnnncgttaaaatgacattaaaaa |
237 |
Q |
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| T |
664374 |
gttttatttatattttttttttaaggattattaatatgtgt-aattacgataaaatggcagttgttgcaacaaaaaaaaacgttaaaatgacattaaaaa |
664276 |
T |
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| Q |
238 |
tgttcaaatgttataataaatgcattcggtgatttgttttataagataaaaagtcaatattgagaa |
303 |
Q |
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| T |
664275 |
tgttcaaatgttataacaaatgtattcggtgatttgttttataagataaaaagtcaatattgagaa |
664210 |
T |
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