View Alignment

This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.

Legend
 Query
 Query hiting target  Query hiting target's complemental strand
 Query's complemental strand hiting target  Query's complemental strand hiting target's complemental strand

Alignment Overview

Query: NF14607_low_18 (Length: 316)

Name: NF14607_low_18
Description: NF14607
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)


[»] NF14607_low_18
NF14607_low_18
[»] chr8 (27 HSPs)
chr8 (46-294)||(30403771-30404017)
chr8 (1-56)||(7983417-7983472)
chr8 (1-42)||(42945496-42945537)
chr8 (1-45)||(6472397-6472441)
chr8 (1-47)||(234122-234168)
chr8 (1-47)||(710533-710579)
chr8 (1-47)||(747745-747791)
chr8 (1-47)||(871640-871686)
chr8 (1-47)||(6471688-6471734)
chr8 (1-43)||(8998071-8998113)
chr8 (1-47)||(11675047-11675093)
chr8 (1-47)||(23505050-23505096)
chr8 (1-47)||(23507809-23507855)
chr8 (1-47)||(35634481-35634527)
chr8 (1-43)||(44664890-44664932)
chr8 (1-42)||(8997859-8997900)
chr8 (1-42)||(25124566-25124607)
chr8 (1-45)||(15229931-15229975)
chr8 (1-53)||(15230313-15230365)
chr8 (1-45)||(44664508-44664552)
chr8 (1-47)||(10445717-10445763)
chr8 (1-47)||(11674693-11674739)
chr8 (1-42)||(36325587-36325628)
chr8 (1-42)||(37542227-37542268)
chr8 (1-46)||(41353955-41354000)
chr8 (1-45)||(25124945-25124989)
chr8 (1-57)||(38003788-38003844)
[»] chr4 (23 HSPs)
chr4 (1-55)||(52573610-52573664)
chr4 (1-55)||(27069292-27069346)
chr4 (1-55)||(27149377-27149431)
chr4 (1-46)||(3032581-3032626)
chr4 (1-50)||(16605597-16605646)
chr4 (1-46)||(54858559-54858604)
chr4 (1-46)||(54858942-54858987)
chr4 (1-48)||(39701291-39701338)
chr4 (1-48)||(50504207-50504254)
chr4 (1-43)||(45463075-45463117)
chr4 (1-47)||(52573226-52573272)
chr4 (1-42)||(11523952-11523993)
chr4 (1-46)||(22567139-22567184)
chr4 (1-45)||(10407889-10407933)
chr4 (1-45)||(10408271-10408315)
chr4 (1-47)||(27068908-27068954)
chr4 (1-51)||(50503819-50503869)
chr4 (1-47)||(51859788-51859834)
chr4 (1-46)||(22987233-22987278)
chr4 (1-42)||(45463455-45463496)
chr4 (1-45)||(4983079-4983123)
chr4 (1-45)||(9400519-9400563)
chr4 (1-57)||(51203597-51203653)
[»] chr6 (16 HSPs)
chr6 (1-58)||(15913535-15913592)
chr6 (1-42)||(21836035-21836076)
chr6 (1-42)||(31407260-31407301)
chr6 (1-45)||(6517503-6517547)
chr6 (1-56)||(7160793-7160848)
chr6 (1-44)||(7905244-7905287)
chr6 (1-56)||(22503156-22503211)
chr6 (1-47)||(10781145-10781191)
chr6 (1-47)||(21836412-21836458)
chr6 (1-47)||(22502772-22502818)
chr6 (1-51)||(31406872-31406922)
chr6 (1-46)||(14196614-14196659)
chr6 (1-48)||(32593487-32593534)
chr6 (1-47)||(7161186-7161232)
chr6 (1-47)||(15913930-15913976)
chr6 (4-53)||(7905628-7905677)
[»] chr7 (21 HSPs)
chr7 (1-53)||(42618293-42618345)
chr7 (1-56)||(43266648-43266703)
chr7 (1-47)||(43266264-43266310)
chr7 (1-46)||(32934730-32934775)
chr7 (1-45)||(25453128-25453172)
chr7 (1-45)||(42617911-42617955)
chr7 (1-47)||(32680593-32680639)
chr7 (1-46)||(23058811-23058856)
chr7 (1-42)||(25628481-25628522)
chr7 (1-42)||(46204424-46204465)
chr7 (1-45)||(10600026-10600070)
chr7 (1-45)||(22081560-22081604)
chr7 (1-45)||(32068478-32068522)
chr7 (1-47)||(32680948-32680994)
chr7 (1-47)||(33828356-33828402)
chr7 (1-42)||(10600331-10600372)
chr7 (1-46)||(27138323-27138368)
chr7 (1-42)||(28890582-28890623)
chr7 (1-42)||(32068099-32068140)
chr7 (1-45)||(22081941-22081985)
chr7 (1-45)||(23058429-23058473)
[»] chr5 (8 HSPs)
chr5 (1-49)||(17544430-17544478)
chr5 (1-48)||(20153297-20153344)
chr5 (1-46)||(33871720-33871765)
chr5 (1-45)||(8875449-8875493)
chr5 (1-39)||(8875649-8875687)
chr5 (1-46)||(3656800-3656845)
chr5 (1-46)||(6758218-6758263)
chr5 (1-45)||(20152781-20152825)
[»] chr1 (23 HSPs)
chr1 (1-56)||(40714825-40714880)
chr1 (1-48)||(45750224-45750271)
chr1 (1-47)||(37929416-37929462)
chr1 (1-47)||(40714442-40714488)
chr1 (1-47)||(49955729-49955775)
chr1 (1-46)||(8898516-8898561)
chr1 (1-46)||(25885375-25885420)
chr1 (1-45)||(17188954-17188998)
chr1 (1-45)||(30326496-30326540)
chr1 (1-57)||(45749831-45749886)
chr1 (1-48)||(24905164-24905211)
chr1 (1-60)||(28011721-28011780)
chr1 (1-47)||(28325185-28325231)
chr1 (1-47)||(31050948-31050994)
chr1 (1-46)||(8898899-8898944)
chr1 (1-46)||(20760887-20760932)
chr1 (1-45)||(17189233-17189277)
chr1 (1-45)||(49955347-49955391)
chr1 (1-47)||(25884699-25884745)
chr1 (1-43)||(44523520-44523562)
chr1 (1-46)||(7371551-7371596)
chr1 (1-46)||(28324804-28324849)
chr1 (1-46)||(31058439-31058484)
[»] scaffold0006 (2 HSPs)
scaffold0006 (1-47)||(222171-222217)
scaffold0006 (1-42)||(221794-221835)
[»] chr3 (29 HSPs)
chr3 (1-51)||(33156378-33156428)
chr3 (1-46)||(32306423-32306468)
chr3 (1-46)||(37778655-37778700)
chr3 (1-46)||(40788802-40788847)
chr3 (1-45)||(10294567-10294611)
chr3 (1-45)||(13949077-13949121)
chr3 (1-55)||(3469190-3469244)
chr3 (1-47)||(3469582-3469628)
chr3 (1-47)||(13948778-13948824)
chr3 (1-43)||(33506180-33506222)
chr3 (1-47)||(36314296-36314342)
chr3 (1-46)||(29118920-29118965)
chr3 (1-42)||(32306806-32306847)
chr3 (1-46)||(52032521-52032566)
chr3 (1-47)||(10770488-10770534)
chr3 (1-43)||(11910701-11910743)
chr3 (1-43)||(29118529-29118571)
chr3 (1-43)||(29685943-29685985)
chr3 (5-43)||(29686326-29686364)
chr3 (1-51)||(33506332-33506382)
chr3 (1-47)||(41421970-41422016)
chr3 (1-47)||(48322730-48322776)
chr3 (1-47)||(52032136-52032182)
chr3 (1-42)||(3596112-3596153)
chr3 (1-54)||(10770844-10770897)
chr3 (1-54)||(36314651-36314704)
chr3 (1-46)||(47551492-47551537)
chr3 (1-45)||(42855689-42855733)
chr3 (1-49)||(48322373-48322421)
[»] chr2 (10 HSPs)
chr2 (1-55)||(6573037-6573091)
chr2 (1-46)||(8710850-8710895)
chr2 (1-45)||(28226126-28226170)
chr2 (1-46)||(15604338-15604383)
chr2 (1-53)||(6573535-6573587)
chr2 (1-48)||(8342184-8342231)
chr2 (1-44)||(11830365-11830408)
chr2 (1-47)||(14900494-14900540)
chr2 (1-42)||(8342561-8342602)
chr2 (1-46)||(41587234-41587279)
[»] scaffold0771 (2 HSPs)
scaffold0771 (1-45)||(1217-1261)
scaffold0771 (1-47)||(918-964)
[»] scaffold0328 (1 HSPs)
scaffold0328 (1-48)||(11522-11569)
[»] scaffold0388 (1 HSPs)
scaffold0388 (1-47)||(12621-12667)
[»] scaffold0205 (1 HSPs)
scaffold0205 (1-46)||(21008-21053)
[»] scaffold0599 (1 HSPs)
scaffold0599 (1-43)||(2395-2437)


Alignment Details
Target: chr8 (Bit Score: 210; Significance: 1e-115; HSPs: 27)
Name: chr8
Description:

Target: chr8; HSP #1
Raw Score: 210; E-Value: 1e-115
Query Start/End: Original strand, 46 - 294
Target Start/End: Complemental strand, 30404017 - 30403771
Alignment:
Q  46 tattttttataaaatagttatatgcacctagaatacttgtaaagaacaagacattgattataacgtacaaattgtagagtttttgtctaactcgtaatat 145  Q
    |||||||||||||||||||||||||||||||||| |||||||||||||| ||||||||||||||  |||||||||||||| |||||||||||| ||||||    
T  30404017 tattttttataaaatagttatatgcacctagaattcttgtaaagaacaaaacattgattataac--acaaattgtagagtgtttgtctaactcataatat 30403920  T
Q  146 atttaaacgtctgttagaatatcaacatcagaaatacaacatgcacaagcacccttttgtcaggcacaatcatctgcaatatgccaaaattatattttgg 245  Q
    |||||||| |||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||    
T  30403919 atttaaacatctgttagaatatcaacatctgaaatacaacatgcacaagcacccttttgtcaggcacaatcatctgcaatattccaaaattatattttgg 30403820  T
Q  246 gggaaacaatgtgatggccttcaaagaaagtaaccaaaagataaccctc 294  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||    
T  30403819 gggaaacaatgtgatggccttcaaagaaagtaaccaaaagataaccctc 30403771  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #2
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 1 - 56
Target Start/End: Complemental strand, 7983472 - 7983417
Alignment:
Q  1 ttttaaatgacgcctaattgcaagaacgaagcacatcattaagcctattttttata 56  Q
    |||||||||||||||||||||||| ||||| ||||| ||||||||||||| |||||    
T  7983472 ttttaaatgacgcctaattgcaaggacgaaacacataattaagcctatttattata 7983417  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #3
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 1 - 42
Target Start/End: Original strand, 42945496 - 42945537
Alignment:
Q  1 ttttaaatgacgcctaattgcaagaacgaagcacatcattaa 42  Q
    |||||||||||||||||||||||||||||| |||||||||||    
T  42945496 ttttaaatgacgcctaattgcaagaacgaaacacatcattaa 42945537  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #4
Raw Score: 37; E-Value: 0.000000000007
Query Start/End: Original strand, 1 - 45
Target Start/End: Original strand, 6472397 - 6472441
Alignment:
Q  1 ttttaaatgacgcctaattgcaagaacgaagcacatcattaagcc 45  Q
    |||||||||||||||||||||||| ||||| ||||||||||||||    
T  6472397 ttttaaatgacgcctaattgcaaggacgaaacacatcattaagcc 6472441  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #5
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 1 - 47
Target Start/End: Original strand, 234122 - 234168
Alignment:
Q  1 ttttaaatgacgcctaattgcaagaacgaagcacatcattaagccta 47  Q
    |||||||||| ||||||||||||| ||||| ||||||||||||||||    
T  234122 ttttaaatgatgcctaattgcaaggacgaaacacatcattaagccta 234168  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #6
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 1 - 47
Target Start/End: Original strand, 710533 - 710579
Alignment:
Q  1 ttttaaatgacgcctaattgcaagaacgaagcacatcattaagccta 47  Q
    |||||||||| ||||||||||||| ||||| ||||||||||||||||    
T  710533 ttttaaatgatgcctaattgcaaggacgaaacacatcattaagccta 710579  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #7
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 1 - 47
Target Start/End: Original strand, 747745 - 747791
Alignment:
Q  1 ttttaaatgacgcctaattgcaagaacgaagcacatcattaagccta 47  Q
    |||||||||| ||||||||||||| ||||| ||||||||||||||||    
T  747745 ttttaaatgatgcctaattgcaaggacgaaacacatcattaagccta 747791  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #8
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 1 - 47
Target Start/End: Original strand, 871640 - 871686
Alignment:
Q  1 ttttaaatgacgcctaattgcaagaacgaagcacatcattaagccta 47  Q
    |||||||||| ||||||||||||| ||||| ||||||||||||||||    
T  871640 ttttaaatgatgcctaattgcaaggacgaaacacatcattaagccta 871686  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #9
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 1 - 47
Target Start/End: Complemental strand, 6471734 - 6471688
Alignment:
Q  1 ttttaaatgacgcctaattgcaagaacgaagcacatcattaagccta 47  Q
    |||||||||||||||||||||||| ||||| ||||||||||| ||||    
T  6471734 ttttaaatgacgcctaattgcaaggacgaaacacatcattaaaccta 6471688  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #10
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 1 - 43
Target Start/End: Original strand, 8998071 - 8998113
Alignment:
Q  1 ttttaaatgacgcctaattgcaagaacgaagcacatcattaag 43  Q
    |||||||||||||||||||||||| ||||| ||||||||||||    
T  8998071 ttttaaatgacgcctaattgcaaggacgaaacacatcattaag 8998113  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #11
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 1 - 47
Target Start/End: Original strand, 11675047 - 11675093
Alignment:
Q  1 ttttaaatgacgcctaattgcaagaacgaagcacatcattaagccta 47  Q
    |||||||||||||||||||||||| || || ||||||||||||||||    
T  11675047 ttttaaatgacgcctaattgcaaggactaatcacatcattaagccta 11675093  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #12
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 1 - 47
Target Start/End: Complemental strand, 23505096 - 23505050
Alignment:
Q  1 ttttaaatgacgcctaattgcaagaacgaagcacatcattaagccta 47  Q
    |||||||||||||||||||||||| || || ||||||||||||||||    
T  23505096 ttttaaatgacgcctaattgcaaggactaatcacatcattaagccta 23505050  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #13
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 1 - 47
Target Start/End: Original strand, 23507809 - 23507855
Alignment:
Q  1 ttttaaatgacgcctaattgcaagaacgaagcacatcattaagccta 47  Q
    |||||||||||||||||||||||| || || ||||||||||||||||    
T  23507809 ttttaaatgacgcctaattgcaaggactaatcacatcattaagccta 23507855  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #14
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 1 - 47
Target Start/End: Original strand, 35634481 - 35634527
Alignment:
Q  1 ttttaaatgacgcctaattgcaagaacgaagcacatcattaagccta 47  Q
    ||||||||||||| |||||||||| ||||| ||||||||||||||||    
T  35634481 ttttaaatgacgcttaattgcaaggacgaaacacatcattaagccta 35634527  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #15
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 1 - 43
Target Start/End: Original strand, 44664890 - 44664932
Alignment:
Q  1 ttttaaatgacgcctaattgcaagaacgaagcacatcattaag 43  Q
    |||||||||||||||||||||||| ||||| ||||||||||||    
T  44664890 ttttaaatgacgcctaattgcaaggacgaaacacatcattaag 44664932  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #16
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 1 - 42
Target Start/End: Complemental strand, 8997900 - 8997859
Alignment:
Q  1 ttttaaatgacgcctaattgcaagaacgaagcacatcattaa 42  Q
    |||||||||||||||||||||||| ||||| |||||||||||    
T  8997900 ttttaaatgacgcctaattgcaaggacgaaacacatcattaa 8997859  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #17
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 1 - 42
Target Start/End: Complemental strand, 25124607 - 25124566
Alignment:
Q  1 ttttaaatgacgcctaattgcaagaacgaagcacatcattaa 42  Q
    ||||||||||||||||||||||||||||||  ||||||||||    
T  25124607 ttttaaatgacgcctaattgcaagaacgaaatacatcattaa 25124566  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #18
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 1 - 45
Target Start/End: Complemental strand, 15229975 - 15229931
Alignment:
Q  1 ttttaaatgacgcctaattgcaagaacgaagcacatcattaagcc 45  Q
    |||||||||||||||||||||||| || || ||||||||||||||    
T  15229975 ttttaaatgacgcctaattgcaaggacaaaacacatcattaagcc 15229931  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #19
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 1 - 53
Target Start/End: Original strand, 15230313 - 15230365
Alignment:
Q  1 ttttaaatgacgcctaattgcaagaacgaagcacatcattaagcctatttttt 53  Q
    ||||||||||| |||||||||||| || || ||||||||||||||| ||||||    
T  15230313 ttttaaatgacacctaattgcaaggacaaaacacatcattaagcctttttttt 15230365  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #20
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 1 - 45
Target Start/End: Complemental strand, 44664552 - 44664508
Alignment:
Q  1 ttttaaatgacgcctaattgcaagaacgaagcacatcattaagcc 45  Q
    |||||||||||||||||||||||| ||||| ||||| ||||||||    
T  44664552 ttttaaatgacgcctaattgcaaggacgaaacacataattaagcc 44664508  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #21
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 1 - 47
Target Start/End: Original strand, 10445717 - 10445763
Alignment:
Q  1 ttttaaatgacgcctaattgcaagaacgaagcacatcattaagccta 47  Q
    ||||||||||| |||||||||||| ||||| ||||||||||| ||||    
T  10445717 ttttaaatgacacctaattgcaaggacgaaacacatcattaaaccta 10445763  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #22
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 1 - 47
Target Start/End: Complemental strand, 11674739 - 11674693
Alignment:
Q  1 ttttaaatgacgcctaattgcaagaacgaagcacatcattaagccta 47  Q
    ||||||| |||||||||||||||| || || ||||||||||||||||    
T  11674739 ttttaaacgacgcctaattgcaaggactaatcacatcattaagccta 11674693  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #23
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 1 - 42
Target Start/End: Original strand, 36325587 - 36325628
Alignment:
Q  1 ttttaaatgacgcctaattgcaagaacgaagcacatcattaa 42  Q
    |||||||||||||||||||||||| || || |||||||||||    
T  36325587 ttttaaatgacgcctaattgcaaggactaatcacatcattaa 36325628  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #24
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 1 - 42
Target Start/End: Complemental strand, 37542268 - 37542227
Alignment:
Q  1 ttttaaatgacgcctaattgcaagaacgaagcacatcattaa 42  Q
    |||||||||||||||||||||||  ||||| |||||||||||    
T  37542268 ttttaaatgacgcctaattgcaaagacgaaacacatcattaa 37542227  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #25
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 1 - 46
Target Start/End: Original strand, 41353955 - 41354000
Alignment:
Q  1 ttttaaatgacgcctaattgcaagaacgaagcacatcattaagcct 46  Q
    |||||||||||||||||||  ||| ||||| |||||||||||||||    
T  41353955 ttttaaatgacgcctaattataaggacgaaacacatcattaagcct 41354000  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #26
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 1 - 45
Target Start/End: Original strand, 25124945 - 25124989
Alignment:
Q  1 ttttaaatgacgcctaattgcaagaacgaagcacatcattaagcc 45  Q
    ||||||||||| |||||||||||| ||||| ||||| ||||||||    
T  25124945 ttttaaatgacacctaattgcaaggacgaaacacatgattaagcc 25124989  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #27
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 1 - 57
Target Start/End: Original strand, 38003788 - 38003844
Alignment:
Q  1 ttttaaatgacgcctaattgcaagaacgaagcacatcattaagcctattttttataa 57  Q
    |||||||| ||| ||||||||||| ||||| ||||||||||| ||| || |||||||    
T  38003788 ttttaaattacgactaattgcaaggacgaaacacatcattaaaccttttctttataa 38003844  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4 (Bit Score: 43; Significance: 0.000000000000002; HSPs: 23)
Name: chr4
Description:

Target: chr4; HSP #1
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 1 - 55
Target Start/End: Original strand, 52573610 - 52573664
Alignment:
Q  1 ttttaaatgacgcctaattgcaagaacgaagcacatcattaagcctattttttat 55  Q
    |||||||||||||||||||||||| ||||| ||||||||||||||| ||||||||    
T  52573610 ttttaaatgacgcctaattgcaaggacgaaacacatcattaagccttttttttat 52573664  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #2
Raw Score: 39; E-Value: 0.0000000000005
Query Start/End: Original strand, 1 - 55
Target Start/End: Original strand, 27069292 - 27069346
Alignment:
Q  1 ttttaaatgacgcctaattgcaagaacgaagcacatcattaagcctattttttat 55  Q
    |||||||||||||||||||||||| ||||| |||||||||||||||  |||||||    
T  27069292 ttttaaatgacgcctaattgcaaggacgaaacacatcattaagccttatttttat 27069346  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #3
Raw Score: 39; E-Value: 0.0000000000005
Query Start/End: Original strand, 1 - 55
Target Start/End: Original strand, 27149377 - 27149431
Alignment:
Q  1 ttttaaatgacgcctaattgcaagaacgaagcacatcattaagcctattttttat 55  Q
    |||||||||||||||||||||||| ||||| |||||||||||||||  |||||||    
T  27149377 ttttaaatgacgcctaattgcaaggacgaaacacatcattaagccttatttttat 27149431  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #4
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 1 - 46
Target Start/End: Complemental strand, 3032626 - 3032581
Alignment:
Q  1 ttttaaatgacgcctaattgcaagaacgaagcacatcattaagcct 46  Q
    |||||||||||||||||||||||| ||||| |||||||||||||||    
T  3032626 ttttaaatgacgcctaattgcaaggacgaaacacatcattaagcct 3032581  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #5
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 1 - 50
Target Start/End: Complemental strand, 16605646 - 16605597
Alignment:
Q  1 ttttaaatgacgcctaattgcaagaacgaagcacatcattaagcctattt 50  Q
    ||||||||||| |||||||||||| ||||| |||||||||||||||||||    
T  16605646 ttttaaatgacacctaattgcaaggacgaaacacatcattaagcctattt 16605597  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #6
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 1 - 46
Target Start/End: Complemental strand, 54858604 - 54858559
Alignment:
Q  1 ttttaaatgacgcctaattgcaagaacgaagcacatcattaagcct 46  Q
    |||||||||||||||||||||||| ||||| |||||||||||||||    
T  54858604 ttttaaatgacgcctaattgcaaggacgaaacacatcattaagcct 54858559  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #7
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 1 - 46
Target Start/End: Original strand, 54858942 - 54858987
Alignment:
Q  1 ttttaaatgacgcctaattgcaagaacgaagcacatcattaagcct 46  Q
    |||||||||||||||||||||||| ||||| |||||||||||||||    
T  54858942 ttttaaatgacgcctaattgcaaggacgaaacacatcattaagcct 54858987  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #8
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 1 - 48
Target Start/End: Original strand, 39701291 - 39701338
Alignment:
Q  1 ttttaaatgacgcctaattgcaagaacgaagcacatcattaagcctat 48  Q
    |||||||||||||||||||||||| ||||| ||||||||||| |||||    
T  39701291 ttttaaatgacgcctaattgcaaggacgaaacacatcattaaacctat 39701338  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #9
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 1 - 48
Target Start/End: Original strand, 50504207 - 50504254
Alignment:
Q  1 ttttaaatgacgcctaattgcaagaacgaagcacatcattaagcctat 48  Q
    ||||||||||||||||||| |||| ||||| |||||||||||||||||    
T  50504207 ttttaaatgacgcctaattacaaggacgaaacacatcattaagcctat 50504254  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #10
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 1 - 43
Target Start/End: Complemental strand, 45463117 - 45463075
Alignment:
Q  1 ttttaaatgacgcctaattgcaagaacgaagcacatcattaag 43  Q
    |||||||||||||||||||||||| ||||| ||||||||||||    
T  45463117 ttttaaatgacgcctaattgcaaggacgaaacacatcattaag 45463075  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #11
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 1 - 47
Target Start/End: Complemental strand, 52573272 - 52573226
Alignment:
Q  1 ttttaaatgacgcctaattgcaagaacgaagcacatcattaagccta 47  Q
    |||||||||||||||||||||||  ||||| ||||||||||||||||    
T  52573272 ttttaaatgacgcctaattgcaaagacgaaacacatcattaagccta 52573226  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #12
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 1 - 42
Target Start/End: Complemental strand, 11523993 - 11523952
Alignment:
Q  1 ttttaaatgacgcctaattgcaagaacgaagcacatcattaa 42  Q
    |||||||||||||||||||||||| ||||| |||||||||||    
T  11523993 ttttaaatgacgcctaattgcaaggacgaaacacatcattaa 11523952  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #13
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 1 - 46
Target Start/End: Original strand, 22567139 - 22567184
Alignment:
Q  1 ttttaaatgacgcctaattgcaagaacgaagcacatcattaagcct 46  Q
    |||||||||||||||||||||||| || || |||||||||||||||    
T  22567139 ttttaaatgacgcctaattgcaaggactaatcacatcattaagcct 22567184  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #14
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 1 - 45
Target Start/End: Complemental strand, 10407933 - 10407889
Alignment:
Q  1 ttttaaatgacgcctaattgcaagaacgaagcacatcattaagcc 45  Q
    ||||||||||| |||||||||||| ||||| ||||||||||||||    
T  10407933 ttttaaatgactcctaattgcaaggacgaaacacatcattaagcc 10407889  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #15
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 1 - 45
Target Start/End: Original strand, 10408271 - 10408315
Alignment:
Q  1 ttttaaatgacgcctaattgcaagaacgaagcacatcattaagcc 45  Q
    |||||||||||||||||||||||| ||||| |||| |||||||||    
T  10408271 ttttaaatgacgcctaattgcaaggacgaaacacaacattaagcc 10408315  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #16
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 1 - 47
Target Start/End: Complemental strand, 27068954 - 27068908
Alignment:
Q  1 ttttaaatgacgcctaattgcaagaacgaagcacatcattaagccta 47  Q
    |||||||||| ||||||||||||| ||||| |||||| |||||||||    
T  27068954 ttttaaatgatgcctaattgcaaggacgaaacacatccttaagccta 27068908  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #17
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 1 - 51
Target Start/End: Complemental strand, 50503869 - 50503819
Alignment:
Q  1 ttttaaatgacgcctaattgcaagaacgaagcacatcattaagcctatttt 51  Q
    |||||||||| |||||||||| || ||||| ||||||||||||||| ||||    
T  50503869 ttttaaatgatgcctaattgcgaggacgaaacacatcattaagcctttttt 50503819  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #18
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 1 - 47
Target Start/End: Original strand, 51859788 - 51859834
Alignment:
Q  1 ttttaaatgacgcctaattgcaagaacgaagcacatcattaagccta 47  Q
    |||||||| ||| ||||||||||| ||||| ||||||||||||||||    
T  51859788 ttttaaattacgtctaattgcaaggacgaaacacatcattaagccta 51859834  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #19
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 1 - 46
Target Start/End: Original strand, 22987233 - 22987278
Alignment:
Q  1 ttttaaatgacgcctaattgcaagaacgaagcacatcattaagcct 46  Q
    |||||||||||| ||||||| ||| ||||| |||||||||||||||    
T  22987233 ttttaaatgacgtctaattgtaaggacgaaacacatcattaagcct 22987278  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #20
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 1 - 42
Target Start/End: Original strand, 45463455 - 45463496
Alignment:
Q  1 ttttaaatgacgcctaattgcaagaacgaagcacatcattaa 42  Q
    |||||||||||||||||||||||| ||||| || ||||||||    
T  45463455 ttttaaatgacgcctaattgcaaggacgaaacatatcattaa 45463496  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #21
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 1 - 45
Target Start/End: Original strand, 4983079 - 4983123
Alignment:
Q  1 ttttaaatgacgcctaattgcaagaacgaagcacatcattaagcc 45  Q
    ||||||| |||||||||||||||| || || ||||||||||||||    
T  4983079 ttttaaacgacgcctaattgcaaggactaatcacatcattaagcc 4983123  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #22
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 1 - 45
Target Start/End: Complemental strand, 9400563 - 9400519
Alignment:
Q  1 ttttaaatgacgcctaattgcaagaacgaagcacatcattaagcc 45  Q
    ||||||||||| |||||||||||| || || ||||||||||||||    
T  9400563 ttttaaatgacacctaattgcaaggactaatcacatcattaagcc 9400519  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #23
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 1 - 57
Target Start/End: Complemental strand, 51203653 - 51203597
Alignment:
Q  1 ttttaaatgacgcctaattgcaagaacgaagcacatcattaagcctattttttataa 57  Q
    ||||||||| ||||||||||||||  | || ||||||| ||||||||| ||||||||    
T  51203653 ttttaaatgccgcctaattgcaagggctaaacacatcaataagcctatattttataa 51203597  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6 (Bit Score: 42; Significance: 0.000000000000008; HSPs: 16)
Name: chr6
Description:

Target: chr6; HSP #1
Raw Score: 42; E-Value: 0.000000000000008
Query Start/End: Original strand, 1 - 58
Target Start/End: Complemental strand, 15913592 - 15913535
Alignment:
Q  1 ttttaaatgacgcctaattgcaagaacgaagcacatcattaagcctattttttataaa 58  Q
    ||||||||||||||||||||||| |||||| ||||||||||| ||||| |||||||||    
T  15913592 ttttaaatgacgcctaattgcaataacgaaacacatcattaaacctatattttataaa 15913535  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #2
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 1 - 42
Target Start/End: Complemental strand, 21836076 - 21836035
Alignment:
Q  1 ttttaaatgacgcctaattgcaagaacgaagcacatcattaa 42  Q
    |||||||||||||||||||||||||||||| |||||||||||    
T  21836076 ttttaaatgacgcctaattgcaagaacgaaacacatcattaa 21836035  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #3
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 1 - 42
Target Start/End: Original strand, 31407260 - 31407301
Alignment:
Q  1 ttttaaatgacgcctaattgcaagaacgaagcacatcattaa 42  Q
    |||||||||||||||||||||||| |||||||||||||||||    
T  31407260 ttttaaatgacgcctaattgcaaggacgaagcacatcattaa 31407301  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #4
Raw Score: 37; E-Value: 0.000000000007
Query Start/End: Original strand, 1 - 45
Target Start/End: Complemental strand, 6517547 - 6517503
Alignment:
Q  1 ttttaaatgacgcctaattgcaagaacgaagcacatcattaagcc 45  Q
    |||||||||||||||||||||||| ||||| ||||||||||||||    
T  6517547 ttttaaatgacgcctaattgcaaggacgaaacacatcattaagcc 6517503  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #5
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 1 - 56
Target Start/End: Complemental strand, 7160848 - 7160793
Alignment:
Q  1 ttttaaatgacgcctaattgcaagaacgaagcacatcattaagcctattttttata 56  Q
    |||||||||||||||||||||||| ||||| ||||||||||| ||||  |||||||    
T  7160848 ttttaaatgacgcctaattgcaaggacgaaacacatcattaaacctagattttata 7160793  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #6
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 1 - 44
Target Start/End: Complemental strand, 7905287 - 7905244
Alignment:
Q  1 ttttaaatgacgcctaattgcaagaacgaagcacatcattaagc 44  Q
    |||||||||||||||||||||||| ||||| |||||||||||||    
T  7905287 ttttaaatgacgcctaattgcaaggacgaaacacatcattaagc 7905244  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #7
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 1 - 56
Target Start/End: Original strand, 22503156 - 22503211
Alignment:
Q  1 ttttaaatgacgcctaattgcaagaacgaagcacatcattaagcctattttttata 56  Q
    |||||||||||||||||||||||| ||||| ||||| |||||||||  ||||||||    
T  22503156 ttttaaatgacgcctaattgcaaggacgaaacacattattaagccttatttttata 22503211  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #8
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 1 - 47
Target Start/End: Complemental strand, 10781191 - 10781145
Alignment:
Q  1 ttttaaatgacgcctaattgcaagaacgaagcacatcattaagccta 47  Q
    |||||||||||||||||||| ||| ||||| ||||||||||||||||    
T  10781191 ttttaaatgacgcctaattgtaaggacgaaacacatcattaagccta 10781145  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #9
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 1 - 47
Target Start/End: Original strand, 21836412 - 21836458
Alignment:
Q  1 ttttaaatgacgcctaattgcaagaacgaagcacatcattaagccta 47  Q
    |||||||||||||||||||||||| | ||| ||||||||||||||||    
T  21836412 ttttaaatgacgcctaattgcaaggatgaaacacatcattaagccta 21836458  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #10
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 1 - 47
Target Start/End: Complemental strand, 22502818 - 22502772
Alignment:
Q  1 ttttaaatgacgcctaattgcaagaacgaagcacatcattaagccta 47  Q
    |||||||||||||||||||||||| ||||| ||||||||||| ||||    
T  22502818 ttttaaatgacgcctaattgcaaggacgaaacacatcattaaaccta 22502772  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #11
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 1 - 51
Target Start/End: Complemental strand, 31406922 - 31406872
Alignment:
Q  1 ttttaaatgacgcctaattgcaagaacgaagcacatcattaagcctatttt 51  Q
    |||||||||||||||||||||||| ||||| ||||| |||||||| |||||    
T  31406922 ttttaaatgacgcctaattgcaaggacgaaacacattattaagccaatttt 31406872  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #12
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 1 - 46
Target Start/End: Complemental strand, 14196659 - 14196614
Alignment:
Q  1 ttttaaatgacgcctaattgcaagaacgaagcacatcattaagcct 46  Q
    |||||||||||||||||||||||| || || |||||||||||||||    
T  14196659 ttttaaatgacgcctaattgcaaggactaatcacatcattaagcct 14196614  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #13
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 1 - 48
Target Start/End: Complemental strand, 32593534 - 32593487
Alignment:
Q  1 ttttaaatgacgcctaattgcaagaacgaagcacatcattaagcctat 48  Q
    |||||||||||||||||||| ||| || || |||||||||||||||||    
T  32593534 ttttaaatgacgcctaattgaaaggactaaacacatcattaagcctat 32593487  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #14
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 1 - 47
Target Start/End: Original strand, 7161186 - 7161232
Alignment:
Q  1 ttttaaatgacgcctaattgcaagaacgaagcacatcattaagccta 47  Q
    |||||||||||||||||||||||| |||||  | |||||||||||||    
T  7161186 ttttaaatgacgcctaattgcaaggacgaaatatatcattaagccta 7161232  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #15
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 1 - 47
Target Start/End: Original strand, 15913930 - 15913976
Alignment:
Q  1 ttttaaatgacgcctaattgcaagaacgaagcacatcattaagccta 47  Q
    ||||||||||| | |||||||||| ||||| ||||||||||||||||    
T  15913930 ttttaaatgacccttaattgcaaggacgaaacacatcattaagccta 15913976  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #16
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 4 - 53
Target Start/End: Original strand, 7905628 - 7905677
Alignment:
Q  4 taaatgacgcctaattgcaagaacgaagcacatcattaagcctatttttt 53  Q
    |||||||| |||||||||||| ||||| ||||||||||| ||| ||||||    
T  7905628 taaatgacacctaattgcaaggacgaaacacatcattaaacctttttttt 7905677  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7 (Bit Score: 41; Significance: 0.00000000000003; HSPs: 21)
Name: chr7
Description:

Target: chr7; HSP #1
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 1 - 53
Target Start/End: Original strand, 42618293 - 42618345
Alignment:
Q  1 ttttaaatgacgcctaattgcaagaacgaagcacatcattaagcctatttttt 53  Q
    |||||||||||||||||||||||| ||||| ||||||||||| ||||||||||    
T  42618293 ttttaaatgacgcctaattgcaaggacgaaacacatcattaaacctatttttt 42618345  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #2
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 1 - 56
Target Start/End: Original strand, 43266648 - 43266703
Alignment:
Q  1 ttttaaatgacgcctaattgcaagaacgaagcacatcattaagcctattttttata 56  Q
    |||||||||||||||||||||||| ||||| ||||||||||||||||  |||||||    
T  43266648 ttttaaatgacgcctaattgcaaggacgaaacacatcattaagcctaaattttata 43266703  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #3
Raw Score: 39; E-Value: 0.0000000000005
Query Start/End: Original strand, 1 - 47
Target Start/End: Complemental strand, 43266310 - 43266264
Alignment:
Q  1 ttttaaatgacgcctaattgcaagaacgaagcacatcattaagccta 47  Q
    |||||||||||||||||||||||| ||||| ||||||||||||||||    
T  43266310 ttttaaatgacgcctaattgcaaggacgaaacacatcattaagccta 43266264  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #4
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 1 - 46
Target Start/End: Original strand, 32934730 - 32934775
Alignment:
Q  1 ttttaaatgacgcctaattgcaagaacgaagcacatcattaagcct 46  Q
    |||||||||||||||||||||||| ||||| |||||||||||||||    
T  32934730 ttttaaatgacgcctaattgcaaggacgaaacacatcattaagcct 32934775  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #5
Raw Score: 37; E-Value: 0.000000000007
Query Start/End: Original strand, 1 - 45
Target Start/End: Complemental strand, 25453172 - 25453128
Alignment:
Q  1 ttttaaatgacgcctaattgcaagaacgaagcacatcattaagcc 45  Q
    |||||||||||||||||||||||| ||||| ||||||||||||||    
T  25453172 ttttaaatgacgcctaattgcaaggacgaaacacatcattaagcc 25453128  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #6
Raw Score: 37; E-Value: 0.000000000007
Query Start/End: Original strand, 1 - 45
Target Start/End: Complemental strand, 42617955 - 42617911
Alignment:
Q  1 ttttaaatgacgcctaattgcaagaacgaagcacatcattaagcc 45  Q
    |||||||||||||||||||||||| ||||| ||||||||||||||    
T  42617955 ttttaaatgacgcctaattgcaaggacgaaacacatcattaagcc 42617911  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #7
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 1 - 47
Target Start/End: Complemental strand, 32680639 - 32680593
Alignment:
Q  1 ttttaaatgacgcctaattgcaagaacgaagcacatcattaagccta 47  Q
    |||||||||||||||||||||||| || || ||||||||||||||||    
T  32680639 ttttaaatgacgcctaattgcaaggactaatcacatcattaagccta 32680593  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #8
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 1 - 46
Target Start/End: Original strand, 23058811 - 23058856
Alignment:
Q  1 ttttaaatgacgcctaattgcaagaacgaagcacatcattaagcct 46  Q
    |||||||||||||| ||||||||| ||||| |||||||||||||||    
T  23058811 ttttaaatgacgccgaattgcaaggacgaaacacatcattaagcct 23058856  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #9
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 1 - 42
Target Start/End: Complemental strand, 25628522 - 25628481
Alignment:
Q  1 ttttaaatgacgcctaattgcaagaacgaagcacatcattaa 42  Q
    |||||||||||||||||||||||| ||||| |||||||||||    
T  25628522 ttttaaatgacgcctaattgcaagcacgaaacacatcattaa 25628481  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #10
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 1 - 42
Target Start/End: Complemental strand, 46204465 - 46204424
Alignment:
Q  1 ttttaaatgacgcctaattgcaagaacgaagcacatcattaa 42  Q
    |||||||||||||||||||||||| ||||| |||||||||||    
T  46204465 ttttaaatgacgcctaattgcaaggacgaaacacatcattaa 46204424  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #11
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 1 - 45
Target Start/End: Complemental strand, 10600070 - 10600026
Alignment:
Q  1 ttttaaatgacgcctaattgcaagaacgaagcacatcattaagcc 45  Q
    |||||||||||||||||||||||| ||||| ||||||||| ||||    
T  10600070 ttttaaatgacgcctaattgcaaggacgaaacacatcatttagcc 10600026  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #12
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 1 - 45
Target Start/End: Complemental strand, 22081604 - 22081560
Alignment:
Q  1 ttttaaatgacgcctaattgcaagaacgaagcacatcattaagcc 45  Q
    ||||||||||||| |||||||||| ||||| ||||||||||||||    
T  22081604 ttttaaatgacgcataattgcaaggacgaaacacatcattaagcc 22081560  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #13
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 1 - 45
Target Start/End: Original strand, 32068478 - 32068522
Alignment:
Q  1 ttttaaatgacgcctaattgcaagaacgaagcacatcattaagcc 45  Q
    ||||||||||| |||||||||||| ||||| ||||||||||||||    
T  32068478 ttttaaatgactcctaattgcaaggacgaaacacatcattaagcc 32068522  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #14
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 1 - 47
Target Start/End: Original strand, 32680948 - 32680994
Alignment:
Q  1 ttttaaatgacgcctaattgcaagaacgaagcacatcattaagccta 47  Q
    ||||||| |||||||||||||||| || || ||||||||||||||||    
T  32680948 ttttaaacgacgcctaattgcaaggactaatcacatcattaagccta 32680994  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #15
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 1 - 47
Target Start/End: Original strand, 33828356 - 33828402
Alignment:
Q  1 ttttaaatgacgcctaattgcaagaacgaagcacatcattaagccta 47  Q
    ||||||||||| |||||||||||| ||||| | ||||||||||||||    
T  33828356 ttttaaatgacacctaattgcaaggacgaaactcatcattaagccta 33828402  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #16
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 1 - 42
Target Start/End: Original strand, 10600331 - 10600372
Alignment:
Q  1 ttttaaatgacgcctaattgcaagaacgaagcacatcattaa 42  Q
    |||||||||||||||||||||||  ||||| |||||||||||    
T  10600331 ttttaaatgacgcctaattgcaatgacgaaacacatcattaa 10600372  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #17
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 1 - 46
Target Start/End: Original strand, 27138323 - 27138368
Alignment:
Q  1 ttttaaatgacgcctaattgcaagaacgaagcacatcattaagcct 46  Q
    ||||||||||||||| |||| ||| ||||| |||||||||||||||    
T  27138323 ttttaaatgacgcctgattgaaaggacgaaacacatcattaagcct 27138368  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #18
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 1 - 42
Target Start/End: Complemental strand, 28890623 - 28890582
Alignment:
Q  1 ttttaaatgacgcctaattgcaagaacgaagcacatcattaa 42  Q
    |||||||||||| ||||||||||| ||||| |||||||||||    
T  28890623 ttttaaatgacgtctaattgcaaggacgaaacacatcattaa 28890582  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #19
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 1 - 42
Target Start/End: Complemental strand, 32068140 - 32068099
Alignment:
Q  1 ttttaaatgacgcctaattgcaagaacgaagcacatcattaa 42  Q
    |||||||||||| ||||||||||| ||||| |||||||||||    
T  32068140 ttttaaatgacgtctaattgcaaggacgaaacacatcattaa 32068099  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #20
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 1 - 45
Target Start/End: Original strand, 22081941 - 22081985
Alignment:
Q  1 ttttaaatgacgcctaattgcaagaacgaagcacatcattaagcc 45  Q
    ||||||||||||| |||||||||| ||||| || |||||||||||    
T  22081941 ttttaaatgacgcataattgcaaggacgaaacaaatcattaagcc 22081985  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #21
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 1 - 45
Target Start/End: Complemental strand, 23058473 - 23058429
Alignment:
Q  1 ttttaaatgacgcctaattgcaagaacgaagcacatcattaagcc 45  Q
    ||||||||||| | |||||||||| ||||| ||||||||||||||    
T  23058473 ttttaaatgactcttaattgcaaggacgaaacacatcattaagcc 23058429  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5 (Bit Score: 41; Significance: 0.00000000000003; HSPs: 8)
Name: chr5
Description:

Target: chr5; HSP #1
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 1 - 49
Target Start/End: Original strand, 17544430 - 17544478
Alignment:
Q  1 ttttaaatgacgcctaattgcaagaacgaagcacatcattaagcctatt 49  Q
    |||||||||||||||||||||||| ||||| ||||||||||||||||||    
T  17544430 ttttaaatgacgcctaattgcaaggacgaaacacatcattaagcctatt 17544478  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #2
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 1 - 48
Target Start/End: Original strand, 20153297 - 20153344
Alignment:
Q  1 ttttaaatgacgcctaattgcaagaacgaagcacatcattaagcctat 48  Q
    ||||||||||| |||||||||||| ||||| |||||||||||||||||    
T  20153297 ttttaaatgacacctaattgcaaggacgaaacacatcattaagcctat 20153344  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #3
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 1 - 46
Target Start/End: Original strand, 33871720 - 33871765
Alignment:
Q  1 ttttaaatgacgcctaattgcaagaacgaagcacatcattaagcct 46  Q
    ||||||||| |||||||||||||| ||||| |||||||||||||||    
T  33871720 ttttaaatggcgcctaattgcaaggacgaaacacatcattaagcct 33871765  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #4
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 1 - 45
Target Start/End: Complemental strand, 8875493 - 8875449
Alignment:
Q  1 ttttaaatgacgcctaattgcaagaacgaagcacatcattaagcc 45  Q
    ||||||||||||| |||||||||| ||||| ||||||||||||||    
T  8875493 ttttaaatgacgcttaattgcaaggacgaaacacatcattaagcc 8875449  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #5
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 1 - 39
Target Start/End: Original strand, 8875649 - 8875687
Alignment:
Q  1 ttttaaatgacgcctaattgcaagaacgaagcacatcat 39  Q
    |||||||||||||||||||||||| ||||| ||||||||    
T  8875649 ttttaaatgacgcctaattgcaaggacgaaacacatcat 8875687  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #6
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 1 - 46
Target Start/End: Original strand, 3656800 - 3656845
Alignment:
Q  1 ttttaaatgacgcctaattgcaagaacgaagcacatcattaagcct 46  Q
    |||||||||||| |||||||||||  |||| |||||||||||||||    
T  3656800 ttttaaatgacgtctaattgcaaggtcgaaacacatcattaagcct 3656845  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #7
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 1 - 46
Target Start/End: Original strand, 6758218 - 6758263
Alignment:
Q  1 ttttaaatgacgcctaattgcaagaacgaagcacatcattaagcct 46  Q
    ||||||| |||||||||||||||| || || |||||||||||||||    
T  6758218 ttttaaacgacgcctaattgcaaggactaatcacatcattaagcct 6758263  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #8
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 1 - 45
Target Start/End: Complemental strand, 20152825 - 20152781
Alignment:
Q  1 ttttaaatgacgcctaattgcaagaacgaagcacatcattaagcc 45  Q
    ||||||||||||| |||||||| | ||||| ||||||||||||||    
T  20152825 ttttaaatgacgcttaattgcatggacgaaacacatcattaagcc 20152781  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1 (Bit Score: 40; Significance: 0.0000000000001; HSPs: 23)
Name: chr1
Description:

Target: chr1; HSP #1
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 1 - 56
Target Start/End: Original strand, 40714825 - 40714880
Alignment:
Q  1 ttttaaatgacgcctaattgcaagaacgaagcacatcattaagcctattttttata 56  Q
    |||||||||||||||||||||||| ||||| |||||||||||||||| | ||||||    
T  40714825 ttttaaatgacgcctaattgcaaggacgaaacacatcattaagcctagtatttata 40714880  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #2
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 1 - 48
Target Start/End: Original strand, 45750224 - 45750271
Alignment:
Q  1 ttttaaatgacgcctaattgcaagaacgaagcacatcattaagcctat 48  Q
    |||||||||||||||||||||||| ||||| |||||||||||||||||    
T  45750224 ttttaaatgacgcctaattgcaaggacgaaacacatcattaagcctat 45750271  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #3
Raw Score: 39; E-Value: 0.0000000000005
Query Start/End: Original strand, 1 - 47
Target Start/End: Complemental strand, 37929462 - 37929416
Alignment:
Q  1 ttttaaatgacgcctaattgcaagaacgaagcacatcattaagccta 47  Q
    |||||||||||||||||||||||| ||||| ||||||||||||||||    
T  37929462 ttttaaatgacgcctaattgcaaggacgaaacacatcattaagccta 37929416  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #4
Raw Score: 39; E-Value: 0.0000000000005
Query Start/End: Original strand, 1 - 47
Target Start/End: Complemental strand, 40714488 - 40714442
Alignment:
Q  1 ttttaaatgacgcctaattgcaagaacgaagcacatcattaagccta 47  Q
    |||||||||||||||||||||||| ||||| ||||||||||||||||    
T  40714488 ttttaaatgacgcctaattgcaaggacgaaacacatcattaagccta 40714442  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #5
Raw Score: 39; E-Value: 0.0000000000005
Query Start/End: Original strand, 1 - 47
Target Start/End: Original strand, 49955729 - 49955775
Alignment:
Q  1 ttttaaatgacgcctaattgcaagaacgaagcacatcattaagccta 47  Q
    |||||||||||||||||||||||| ||||| ||||||||||||||||    
T  49955729 ttttaaatgacgcctaattgcaaggacgaaacacatcattaagccta 49955775  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #6
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 1 - 46
Target Start/End: Complemental strand, 8898561 - 8898516
Alignment:
Q  1 ttttaaatgacgcctaattgcaagaacgaagcacatcattaagcct 46  Q
    |||||||||||||||||||||||| ||||| |||||||||||||||    
T  8898561 ttttaaatgacgcctaattgcaaggacgaaacacatcattaagcct 8898516  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #7
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 1 - 46
Target Start/End: Original strand, 25885375 - 25885420
Alignment:
Q  1 ttttaaatgacgcctaattgcaagaacgaagcacatcattaagcct 46  Q
    |||||||||||||||||||||||| ||||| |||||||||||||||    
T  25885375 ttttaaatgacgcctaattgcaaggacgaaacacatcattaagcct 25885420  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #8
Raw Score: 37; E-Value: 0.000000000007
Query Start/End: Original strand, 1 - 45
Target Start/End: Complemental strand, 17188998 - 17188954
Alignment:
Q  1 ttttaaatgacgcctaattgcaagaacgaagcacatcattaagcc 45  Q
    |||||||||||||||||||||||| ||||| ||||||||||||||    
T  17188998 ttttaaatgacgcctaattgcaaggacgaaacacatcattaagcc 17188954  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #9
Raw Score: 37; E-Value: 0.000000000007
Query Start/End: Original strand, 1 - 45
Target Start/End: Complemental strand, 30326540 - 30326496
Alignment:
Q  1 ttttaaatgacgcctaattgcaagaacgaagcacatcattaagcc 45  Q
    |||||||||||||||||||||||| ||||| ||||||||||||||    
T  30326540 ttttaaatgacgcctaattgcaaggacgaaacacatcattaagcc 30326496  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #10
Raw Score: 37; E-Value: 0.000000000007
Query Start/End: Original strand, 1 - 57
Target Start/End: Complemental strand, 45749886 - 45749831
Alignment:
Q  1 ttttaaatgacgcctaattgcaagaacgaagcacatcattaagcctattttttataa 57  Q
    |||||||||||||||||||||||| | ||| ||||||||||||||| ||||||||||    
T  45749886 ttttaaatgacgcctaattgcaaggatgaaacacatcattaagcct-ttttttataa 45749831  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #11
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 1 - 48
Target Start/End: Complemental strand, 24905211 - 24905164
Alignment:
Q  1 ttttaaatgacgcctaattgcaagaacgaagcacatcattaagcctat 48  Q
    |||||||||||||||||||||||| || || |||||||||||||||||    
T  24905211 ttttaaatgacgcctaattgcaaggactaatcacatcattaagcctat 24905164  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #12
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 1 - 60
Target Start/End: Original strand, 28011721 - 28011780
Alignment:
Q  1 ttttaaatgacgcctaattgcaagaacgaagcacatcattaagcctattttttataaaat 60  Q
    |||||||||||||||||||||||| || || ||||||||||||||| ||||  |||||||    
T  28011721 ttttaaatgacgcctaattgcaaggactaatcacatcattaagccttttttaaataaaat 28011780  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #13
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 1 - 47
Target Start/End: Original strand, 28325185 - 28325231
Alignment:
Q  1 ttttaaatgacgcctaattgcaagaacgaagcacatcattaagccta 47  Q
    ||||||||||||||||||||||||  |||| ||||||||||||||||    
T  28325185 ttttaaatgacgcctaattgcaaggccgaaacacatcattaagccta 28325231  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #14
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 1 - 47
Target Start/End: Complemental strand, 31050994 - 31050948
Alignment:
Q  1 ttttaaatgacgcctaattgcaagaacgaagcacatcattaagccta 47  Q
    |||||||| ||||||||||||||| ||||| ||||||||||||||||    
T  31050994 ttttaaataacgcctaattgcaaggacgaaacacatcattaagccta 31050948  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #15
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 1 - 46
Target Start/End: Original strand, 8898899 - 8898944
Alignment:
Q  1 ttttaaatgacgcctaattgcaagaacgaagcacatcattaagcct 46  Q
    ||||||||||||||||||| |||| ||||| |||||||||||||||    
T  8898899 ttttaaatgacgcctaattacaaggacgaaacacatcattaagcct 8898944  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #16
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 1 - 46
Target Start/End: Original strand, 20760887 - 20760932
Alignment:
Q  1 ttttaaatgacgcctaattgcaagaacgaagcacatcattaagcct 46  Q
    |||||||||||||||||||| ||| ||||| |||||||||||||||    
T  20760887 ttttaaatgacgcctaattgtaaggacgaaacacatcattaagcct 20760932  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #17
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 1 - 45
Target Start/End: Original strand, 17189233 - 17189277
Alignment:
Q  1 ttttaaatgacgcctaattgcaagaacgaagcacatcattaagcc 45  Q
    |||||||||||| ||||||||||| ||||| ||||||||||||||    
T  17189233 ttttaaatgacgtctaattgcaaggacgaaacacatcattaagcc 17189277  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #18
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 1 - 45
Target Start/End: Complemental strand, 49955391 - 49955347
Alignment:
Q  1 ttttaaatgacgcctaattgcaagaacgaagcacatcattaagcc 45  Q
    |||||||||| ||||||||||||| ||||| ||||||||||||||    
T  49955391 ttttaaatgatgcctaattgcaaggacgaaacacatcattaagcc 49955347  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #19
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 1 - 47
Target Start/End: Complemental strand, 25884745 - 25884699
Alignment:
Q  1 ttttaaatgacgcctaattgcaagaacgaagcacatcattaagccta 47  Q
    |||||||||||| ||||||||||  ||||| ||||||||||||||||    
T  25884745 ttttaaatgacgtctaattgcaatgacgaaacacatcattaagccta 25884699  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #20
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 1 - 43
Target Start/End: Original strand, 44523520 - 44523562
Alignment:
Q  1 ttttaaatgacgcctaattgcaagaacgaagcacatcattaag 43  Q
    |||||||||| ||||||||||||| ||||| ||||||||||||    
T  44523520 ttttaaatgaggcctaattgcaaggacgaaacacatcattaag 44523562  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #21
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 1 - 46
Target Start/End: Original strand, 7371551 - 7371596
Alignment:
Q  1 ttttaaatgacgcctaattgcaagaacgaagcacatcattaagcct 46  Q
    |||||||||||| ||||||||||| ||||| |||||| ||||||||    
T  7371551 ttttaaatgacgtctaattgcaaggacgaaacacatcgttaagcct 7371596  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #22
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 1 - 46
Target Start/End: Complemental strand, 28324849 - 28324804
Alignment:
Q  1 ttttaaatgacgcctaattgcaagaacgaagcacatcattaagcct 46  Q
    ||||||| |||||||||||||||| | ||| |||||||||||||||    
T  28324849 ttttaaacgacgcctaattgcaaggaggaaacacatcattaagcct 28324804  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #23
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 1 - 46
Target Start/End: Original strand, 31058439 - 31058484
Alignment:
Q  1 ttttaaatgacgcctaattgcaagaacgaagcacatcattaagcct 46  Q
    |||||||||| | ||||||||||| ||||| |||||||||||||||    
T  31058439 ttttaaatgatgtctaattgcaaggacgaaacacatcattaagcct 31058484  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0006 (Bit Score: 39; Significance: 0.0000000000005; HSPs: 2)
Name: scaffold0006
Description:

Target: scaffold0006; HSP #1
Raw Score: 39; E-Value: 0.0000000000005
Query Start/End: Original strand, 1 - 47
Target Start/End: Original strand, 222171 - 222217
Alignment:
Q  1 ttttaaatgacgcctaattgcaagaacgaagcacatcattaagccta 47  Q
    |||||||||||||||||||||||| ||||| ||||||||||||||||    
T  222171 ttttaaatgacgcctaattgcaaggacgaaacacatcattaagccta 222217  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0006; HSP #2
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 1 - 42
Target Start/End: Complemental strand, 221835 - 221794
Alignment:
Q  1 ttttaaatgacgcctaattgcaagaacgaagcacatcattaa 42  Q
    |||||||||||||||||||||||||||||| |||||||||||    
T  221835 ttttaaatgacgcctaattgcaagaacgaaacacatcattaa 221794  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3 (Bit Score: 39; Significance: 0.0000000000005; HSPs: 29)
Name: chr3
Description:

Target: chr3; HSP #1
Raw Score: 39; E-Value: 0.0000000000005
Query Start/End: Original strand, 1 - 51
Target Start/End: Original strand, 33156378 - 33156428
Alignment:
Q  1 ttttaaatgacgcctaattgcaagaacgaagcacatcattaagcctatttt 51  Q
    |||||||||||||||||||||||| ||||| ||||||||||| ||||||||    
T  33156378 ttttaaatgacgcctaattgcaaggacgaaacacatcattaaacctatttt 33156428  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #2
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 1 - 46
Target Start/End: Complemental strand, 32306468 - 32306423
Alignment:
Q  1 ttttaaatgacgcctaattgcaagaacgaagcacatcattaagcct 46  Q
    |||||||||||||||||||||||| ||||| |||||||||||||||    
T  32306468 ttttaaatgacgcctaattgcaaggacgaaacacatcattaagcct 32306423  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #3
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 1 - 46
Target Start/End: Original strand, 37778655 - 37778700
Alignment:
Q  1 ttttaaatgacgcctaattgcaagaacgaagcacatcattaagcct 46  Q
    |||||||||||||||||||||||| ||||| |||||||||||||||    
T  37778655 ttttaaatgacgcctaattgcaaggacgaaacacatcattaagcct 37778700  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #4
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 1 - 46
Target Start/End: Original strand, 40788802 - 40788847
Alignment:
Q  1 ttttaaatgacgcctaattgcaagaacgaagcacatcattaagcct 46  Q
    |||||||||||||||||||||||| ||||| |||||||||||||||    
T  40788802 ttttaaatgacgcctaattgcaaggacgaaacacatcattaagcct 40788847  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #5
Raw Score: 37; E-Value: 0.000000000007
Query Start/End: Original strand, 1 - 45
Target Start/End: Complemental strand, 10294611 - 10294567
Alignment:
Q  1 ttttaaatgacgcctaattgcaagaacgaagcacatcattaagcc 45  Q
    |||||||||||||||||||||||| ||||| ||||||||||||||    
T  10294611 ttttaaatgacgcctaattgcaaggacgaaacacatcattaagcc 10294567  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #6
Raw Score: 37; E-Value: 0.000000000007
Query Start/End: Original strand, 1 - 45
Target Start/End: Original strand, 13949077 - 13949121
Alignment:
Q  1 ttttaaatgacgcctaattgcaagaacgaagcacatcattaagcc 45  Q
    |||||||||||||||||||||||| ||||| ||||||||||||||    
T  13949077 ttttaaatgacgcctaattgcaaggacgaaacacatcattaagcc 13949121  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #7
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 1 - 55
Target Start/End: Complemental strand, 3469244 - 3469190
Alignment:
Q  1 ttttaaatgacgcctaattgcaagaacgaagcacatcattaagcctattttttat 55  Q
    |||||||||||||||||||||||  ||||| ||||||||||||||| | ||||||    
T  3469244 ttttaaatgacgcctaattgcaaagacgaaacacatcattaagcctttattttat 3469190  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #8
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 1 - 47
Target Start/End: Original strand, 3469582 - 3469628
Alignment:
Q  1 ttttaaatgacgcctaattgcaagaacgaagcacatcattaagccta 47  Q
    |||||||||||||||||||||||| ||||| || |||||||||||||    
T  3469582 ttttaaatgacgcctaattgcaaggacgaaacagatcattaagccta 3469628  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #9
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 1 - 47
Target Start/End: Complemental strand, 13948824 - 13948778
Alignment:
Q  1 ttttaaatgacgcctaattgcaagaacgaagcacatcattaagccta 47  Q
    |||||||||| ||||||||||||| ||||| ||||||||||||||||    
T  13948824 ttttaaatgatgcctaattgcaaggacgaaacacatcattaagccta 13948778  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #10
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 1 - 43
Target Start/End: Complemental strand, 33506222 - 33506180
Alignment:
Q  1 ttttaaatgacgcctaattgcaagaacgaagcacatcattaag 43  Q
    |||||||||||||||||||||||| ||||| ||||||||||||    
T  33506222 ttttaaatgacgcctaattgcaaggacgaaacacatcattaag 33506180  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #11
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 1 - 47
Target Start/End: Complemental strand, 36314342 - 36314296
Alignment:
Q  1 ttttaaatgacgcctaattgcaagaacgaagcacatcattaagccta 47  Q
    |||||||||||||||||||||||| || || ||||||||||||||||    
T  36314342 ttttaaatgacgcctaattgcaaggactaatcacatcattaagccta 36314296  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #12
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 1 - 46
Target Start/End: Original strand, 29118920 - 29118965
Alignment:
Q  1 ttttaaatgacgcctaattgcaagaacgaagcacatcattaagcct 46  Q
    |||||||||||||||||||||||| ||||| |||||||||| ||||    
T  29118920 ttttaaatgacgcctaattgcaaggacgaaacacatcattatgcct 29118965  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #13
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 1 - 42
Target Start/End: Original strand, 32306806 - 32306847
Alignment:
Q  1 ttttaaatgacgcctaattgcaagaacgaagcacatcattaa 42  Q
    |||||||||||||||||||||||| ||||| |||||||||||    
T  32306806 ttttaaatgacgcctaattgcaaggacgaaacacatcattaa 32306847  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #14
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 1 - 46
Target Start/End: Original strand, 52032521 - 52032566
Alignment:
Q  1 ttttaaatgacgcctaattgcaagaacgaagcacatcattaagcct 46  Q
    |||||||||||| ||||||||||| ||||| |||||||||||||||    
T  52032521 ttttaaatgacgtctaattgcaaggacgaaacacatcattaagcct 52032566  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #15
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 1 - 47
Target Start/End: Complemental strand, 10770534 - 10770488
Alignment:
Q  1 ttttaaatgacgcctaattgcaagaacgaagcacatcattaagccta 47  Q
    |||||||||||||||||||||||| || || ||||||||||| ||||    
T  10770534 ttttaaatgacgcctaattgcaaggactaatcacatcattaaaccta 10770488  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #16
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 1 - 43
Target Start/End: Complemental strand, 11910743 - 11910701
Alignment:
Q  1 ttttaaatgacgcctaattgcaagaacgaagcacatcattaag 43  Q
    |||||||||||| ||||||||||| ||||| ||||||||||||    
T  11910743 ttttaaatgacgtctaattgcaaggacgaaacacatcattaag 11910701  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #17
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 1 - 43
Target Start/End: Complemental strand, 29118571 - 29118529
Alignment:
Q  1 ttttaaatgacgcctaattgcaagaacgaagcacatcattaag 43  Q
    ||||||||||||| |||||||||| ||||| ||||||||||||    
T  29118571 ttttaaatgacgcataattgcaaggacgaaacacatcattaag 29118529  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #18
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 1 - 43
Target Start/End: Complemental strand, 29685985 - 29685943
Alignment:
Q  1 ttttaaatgacgcctaattgcaagaacgaagcacatcattaag 43  Q
    |||||||||||||||||||||||| |||||  |||||||||||    
T  29685985 ttttaaatgacgcctaattgcaaggacgaaatacatcattaag 29685943  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #19
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 5 - 43
Target Start/End: Original strand, 29686326 - 29686364
Alignment:
Q  5 aaatgacgcctaattgcaagaacgaagcacatcattaag 43  Q
    |||||||||||||||||||| ||||| ||||||||||||    
T  29686326 aaatgacgcctaattgcaaggacgaaacacatcattaag 29686364  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #20
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 1 - 51
Target Start/End: Original strand, 33506332 - 33506382
Alignment:
Q  1 ttttaaatgacgcctaattgcaagaacgaagcacatcattaagcctatttt 51  Q
    |||||||| ||||||||||| ||| ||||| ||||||||||||||| ||||    
T  33506332 ttttaaataacgcctaattgaaaggacgaaacacatcattaagcctttttt 33506382  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #21
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 1 - 47
Target Start/End: Complemental strand, 41422016 - 41421970
Alignment:
Q  1 ttttaaatgacgcctaattgcaagaacgaagcacatcattaagccta 47  Q
    |||||| ||||||||||||||||| ||||| ||||||||||| ||||    
T  41422016 ttttaactgacgcctaattgcaaggacgaaacacatcattaaaccta 41421970  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #22
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 1 - 47
Target Start/End: Original strand, 48322730 - 48322776
Alignment:
Q  1 ttttaaatgacgcctaattgcaagaacgaagcacatcattaagccta 47  Q
    ||||||| |||||||||||||||| || || ||||||||||||||||    
T  48322730 ttttaaacgacgcctaattgcaaggactaatcacatcattaagccta 48322776  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #23
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 1 - 47
Target Start/End: Complemental strand, 52032182 - 52032136
Alignment:
Q  1 ttttaaatgacgcctaattgcaagaacgaagcacatcattaagccta 47  Q
    |||||||||||||||||||||||| || || ||||||||||| ||||    
T  52032182 ttttaaatgacgcctaattgcaaggacaaaacacatcattaaaccta 52032136  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #24
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 1 - 42
Target Start/End: Complemental strand, 3596153 - 3596112
Alignment:
Q  1 ttttaaatgacgcctaattgcaagaacgaagcacatcattaa 42  Q
    |||||||| ||||||||||||||| ||||| |||||||||||    
T  3596153 ttttaaatcacgcctaattgcaaggacgaaacacatcattaa 3596112  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #25
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 1 - 54
Target Start/End: Original strand, 10770844 - 10770897
Alignment:
Q  1 ttttaaatgacgcctaattgcaagaacgaagcacatcattaagcctatttttta 54  Q
    |||||||||||||||||||| ||| || || ||||||||||| ||||| |||||    
T  10770844 ttttaaatgacgcctaattgtaaggactaatcacatcattaaacctatatttta 10770897  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #26
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 1 - 54
Target Start/End: Original strand, 36314651 - 36314704
Alignment:
Q  1 ttttaaatgacgcctaattgcaagaacgaagcacatcattaagcctatttttta 54  Q
    ||||||| |||||||||||||||| || || |||||||||||||| || |||||    
T  36314651 ttttaaacgacgcctaattgcaaggactaatcacatcattaagccaatatttta 36314704  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #27
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 1 - 46
Target Start/End: Complemental strand, 47551537 - 47551492
Alignment:
Q  1 ttttaaatgacgcctaattgcaagaacgaagcacatcattaagcct 46  Q
    |||||||||||  ||||||||||| ||||| |||||||||||||||    
T  47551537 ttttaaatgacatctaattgcaaggacgaaacacatcattaagcct 47551492  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #28
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 1 - 45
Target Start/End: Original strand, 42855689 - 42855733
Alignment:
Q  1 ttttaaatgacgcctaattgcaagaacgaagcacatcattaagcc 45  Q
    ||||||||||||||||||||||||  | || ||||||||||||||    
T  42855689 ttttaaatgacgcctaattgcaagggctaaacacatcattaagcc 42855733  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #29
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 1 - 49
Target Start/End: Complemental strand, 48322421 - 48322373
Alignment:
Q  1 ttttaaatgacgcctaattgcaagaacgaagcacatcattaagcctatt 49  Q
    |||||||||| | ||||||||||| || || ||||||||||||||||||    
T  48322421 ttttaaatgatgtctaattgcaaggactaatcacatcattaagcctatt 48322373  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2 (Bit Score: 39; Significance: 0.0000000000005; HSPs: 10)
Name: chr2
Description:

Target: chr2; HSP #1
Raw Score: 39; E-Value: 0.0000000000005
Query Start/End: Original strand, 1 - 55
Target Start/End: Complemental strand, 6573091 - 6573037
Alignment:
Q  1 ttttaaatgacgcctaattgcaagaacgaagcacatcattaagcctattttttat 55  Q
    |||||||||||||||||||||| | ||||| ||||||||||| ||||||||||||    
T  6573091 ttttaaatgacgcctaattgcagggacgaaacacatcattaaacctattttttat 6573037  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #2
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 1 - 46
Target Start/End: Original strand, 8710850 - 8710895
Alignment:
Q  1 ttttaaatgacgcctaattgcaagaacgaagcacatcattaagcct 46  Q
    |||||||||||||||||||||||| ||||| |||||||||||||||    
T  8710850 ttttaaatgacgcctaattgcaaggacgaaacacatcattaagcct 8710895  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #3
Raw Score: 37; E-Value: 0.000000000007
Query Start/End: Original strand, 1 - 45
Target Start/End: Original strand, 28226126 - 28226170
Alignment:
Q  1 ttttaaatgacgcctaattgcaagaacgaagcacatcattaagcc 45  Q
    |||||||||||||||||||||||| ||||| ||||||||||||||    
T  28226126 ttttaaatgacgcctaattgcaaggacgaaacacatcattaagcc 28226170  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #4
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 1 - 46
Target Start/End: Complemental strand, 15604383 - 15604338
Alignment:
Q  1 ttttaaatgacgcctaattgcaagaacgaagcacatcattaagcct 46  Q
    ||||||||||| |||||||||||| ||||| |||||||||||||||    
T  15604383 ttttaaatgacacctaattgcaaggacgaaacacatcattaagcct 15604338  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #5
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 1 - 53
Target Start/End: Complemental strand, 6573587 - 6573535
Alignment:
Q  1 ttttaaatgacgcctaattgcaagaacgaagcacatcattaagcctatttttt 53  Q
    |||||||||||||||||||| | | | ||| ||||||||||||||||||||||    
T  6573587 ttttaaatgacgcctaattggagggatgaaacacatcattaagcctatttttt 6573535  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #6
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 1 - 48
Target Start/End: Complemental strand, 8342231 - 8342184
Alignment:
Q  1 ttttaaatgacgcctaattgcaagaacgaagcacatcattaagcctat 48  Q
    ||||||||||||| |||||||||| ||||| ||||||||||| |||||    
T  8342231 ttttaaatgacgcttaattgcaaggacgaaacacatcattaaacctat 8342184  T

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Target: chr2; HSP #7
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 1 - 44
Target Start/End: Complemental strand, 11830408 - 11830365
Alignment:
Q  1 ttttaaatgacgcctaattgcaagaacgaagcacatcattaagc 44  Q
    |||||||||||| ||||||||||| ||||| |||||||||||||    
T  11830408 ttttaaatgacgtctaattgcaaggacgaaacacatcattaagc 11830365  T

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Target: chr2; HSP #8
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 1 - 47
Target Start/End: Complemental strand, 14900540 - 14900494
Alignment:
Q  1 ttttaaatgacgcctaattgcaagaacgaagcacatcattaagccta 47  Q
    |||| ||||||||||||||||||| || || ||||||||||||||||    
T  14900540 ttttgaatgacgcctaattgcaaggactaatcacatcattaagccta 14900494  T

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Target: chr2; HSP #9
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 1 - 42
Target Start/End: Original strand, 8342561 - 8342602
Alignment:
Q  1 ttttaaatgacgcctaattgcaagaacgaagcacatcattaa 42  Q
    |||||||||||||||||||| ||| ||||| |||||||||||    
T  8342561 ttttaaatgacgcctaattgtaaggacgaaacacatcattaa 8342602  T

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Target: chr2; HSP #10
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 1 - 46
Target Start/End: Complemental strand, 41587279 - 41587234
Alignment:
Q  1 ttttaaatgacgcctaattgcaagaacgaagcacatcattaagcct 46  Q
    ||||||||||| | |||||||||| ||||| |||||||||||||||    
T  41587279 ttttaaatgactcttaattgcaaggacgaaacacatcattaagcct 41587234  T

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Target: scaffold0771 (Bit Score: 37; Significance: 0.000000000007; HSPs: 2)
Name: scaffold0771
Description:

Target: scaffold0771; HSP #1
Raw Score: 37; E-Value: 0.000000000007
Query Start/End: Original strand, 1 - 45
Target Start/End: Original strand, 1217 - 1261
Alignment:
Q  1 ttttaaatgacgcctaattgcaagaacgaagcacatcattaagcc 45  Q
    |||||||||||||||||||||||| ||||| ||||||||||||||    
T  1217 ttttaaatgacgcctaattgcaaggacgaaacacatcattaagcc 1261  T

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Target: scaffold0771; HSP #2
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 1 - 47
Target Start/End: Complemental strand, 964 - 918
Alignment:
Q  1 ttttaaatgacgcctaattgcaagaacgaagcacatcattaagccta 47  Q
    |||||||||| ||||||||||||| ||||| ||||||||||||||||    
T  964 ttttaaatgatgcctaattgcaaggacgaaacacatcattaagccta 918  T

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Target: scaffold0328 (Bit Score: 36; Significance: 0.00000000003; HSPs: 1)
Name: scaffold0328
Description:

Target: scaffold0328; HSP #1
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 1 - 48
Target Start/End: Original strand, 11522 - 11569
Alignment:
Q  1 ttttaaatgacgcctaattgcaagaacgaagcacatcattaagcctat 48  Q
    |||||||||||||||||||||||| | ||| |||||||||||||||||    
T  11522 ttttaaatgacgcctaattgcaaggatgaaacacatcattaagcctat 11569  T

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Target: scaffold0388 (Bit Score: 35; Significance: 0.0000000001; HSPs: 1)
Name: scaffold0388
Description:

Target: scaffold0388; HSP #1
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 1 - 47
Target Start/End: Original strand, 12621 - 12667
Alignment:
Q  1 ttttaaatgacgcctaattgcaagaacgaagcacatcattaagccta 47  Q
    |||||||||||||||||||||||| ||||| ||||||||||| ||||    
T  12621 ttttaaatgacgcctaattgcaaggacgaaacacatcattaaaccta 12667  T

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Target: scaffold0205 (Bit Score: 34; Significance: 0.0000000004; HSPs: 1)
Name: scaffold0205
Description:

Target: scaffold0205; HSP #1
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 1 - 46
Target Start/End: Complemental strand, 21053 - 21008
Alignment:
Q  1 ttttaaatgacgcctaattgcaagaacgaagcacatcattaagcct 46  Q
    |||||||||||||||||||||||| || || |||||||||||||||    
T  21053 ttttaaatgacgcctaattgcaaggactaatcacatcattaagcct 21008  T

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Target: scaffold0599 (Bit Score: 31; Significance: 0.00000003; HSPs: 1)
Name: scaffold0599
Description:

Target: scaffold0599; HSP #1
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 1 - 43
Target Start/End: Complemental strand, 2437 - 2395
Alignment:
Q  1 ttttaaatgacgcctaattgcaagaacgaagcacatcattaag 43  Q
    |||||||||||| ||||||||||| ||||| ||||||||||||    
T  2437 ttttaaatgacgtctaattgcaaggacgaaacacatcattaag 2395  T

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