View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF14607_low_6 (Length: 467)
Name: NF14607_low_6
Description: NF14607
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF14607_low_6 |
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Alignment Details
Target: chr7 (Bit Score: 319; Significance: 1e-180; HSPs: 1)
Name: chr7
Description:
Target: chr7; HSP #1
Raw Score: 319; E-Value: 1e-180
Query Start/End: Original strand, 11 - 381
Target Start/End: Complemental strand, 43710670 - 43710302
Alignment:
| Q |
11 |
cagagatgtgacatttaggcttgttgtatttaatcagttcgatagcaccatgtcaatcaaacaacgtacgattcatcctctttccttgtctgtttcattt |
110 |
Q |
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| T |
43710670 |
cagagatgtgacatttaggcttgttgtatttaatcagttcgatagcaccatgtcaatcaaacaacgtacgattcatcctctttccttgtctgtttcattt |
43710571 |
T |
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| Q |
111 |
tattcccttgctttcaaggttaagataatgagtttaaatggaatacacttacattgtaaatcttttttctttgagtcatacatttagtgtatgtaagtca |
210 |
Q |
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| T |
43710570 |
tattcccttgctttcaaggttaagataatgagtttaaatggaatacacttacattgtaaatcttttttctttgactcatacatttagtgtatgtaagtca |
43710471 |
T |
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| Q |
211 |
atcagagtccattaagtcactcttataacttatcnnnnnnnnnnnnnggactgaatcttgtaacttaatcttaaatcaatggtctgtagtggcgcaatat |
310 |
Q |
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| T |
43710470 |
atcagagtccattaagtcactcttataacttatc--tttttttttttggactgaatcttgtaacttaatcttaaatcaatggtctgtagtggcgcaatat |
43710373 |
T |
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| Q |
311 |
aatggactttcatgggatgtaagtgtaaaattaatttacactcacagtgtatgccccttattctcctaatg |
381 |
Q |
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|||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||| |
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| T |
43710372 |
aatggactttcatgggatgtaagtgtaaaattaatttacactcaaagtgtatgccccttattctcctaatg |
43710302 |
T |
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