View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF14607_low_7 (Length: 458)
Name: NF14607_low_7
Description: NF14607
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF14607_low_7 |
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Alignment Details
Target: chr5 (Bit Score: 350; Significance: 0; HSPs: 1)
Name: chr5
Description:
Target: chr5; HSP #1
Raw Score: 350; E-Value: 0
Query Start/End: Original strand, 48 - 441
Target Start/End: Original strand, 36240239 - 36240631
Alignment:
| Q |
48 |
atcaaaaagaacgttaaaaattaacattgatgtatttgatccaaccttcaaacaaaatatatcaacttattgacttaaatgtatcttataaacatgaaga |
147 |
Q |
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| T |
36240239 |
atcaaaaagaacgttaaaaattaaaattgatgtatttgatccaaatttcaaacaaaatacatcaacttattaacttaaatgtatcttataaacatgaaga |
36240338 |
T |
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| Q |
148 |
gatgaagtatcaatatgactaagtttattaattaacatggttaatcaaaagatgcatgctatgttgattaaggatagacatactagttggctatatggga |
247 |
Q |
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| T |
36240339 |
gatgaagtaacaatatgactaagtttattaattaacatgtttaatcaaa-gatacatgctatgttgattaaggatagacatacaagttggctatatggga |
36240437 |
T |
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| Q |
248 |
attaattatagagtatagactaaatcaagaaacaggttgtttgatgtagtagggattgttttctggcgcaccaatttcatagttgcaaaatttaatgctt |
347 |
Q |
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| T |
36240438 |
attaattatagagtatagactaaatcaagaaacaggttgtttgatgtagtagggattgttttctggcgcaccaatttcatagttgcaaaatttaatgctt |
36240537 |
T |
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| Q |
348 |
ggtgatcaaactaaattaaaaatgatgggtctaatgggtagttgttcaattatttttggaataatctgaccgttgattaagggactggggtact |
441 |
Q |
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| T |
36240538 |
ggtgatcaaactaaattaaaaatgatgggtctaatgggtagttgttcaattatttttggaataatctgaccgttgattaagggactggggtact |
36240631 |
T |
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