View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF14609_high_3 (Length: 386)
Name: NF14609_high_3
Description: NF14609
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF14609_high_3 |
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Alignment Details
Target: chr7 (Bit Score: 273; Significance: 1e-152; HSPs: 1)
Name: chr7
Description:
Target: chr7; HSP #1
Raw Score: 273; E-Value: 1e-152
Query Start/End: Original strand, 1 - 340
Target Start/End: Original strand, 26881822 - 26882161
Alignment:
| Q |
1 |
cagagaagaagcaatcaccagagaagggagattagtgaacttccgtggtcaagcggtctggtgtgtaaatttaatatgaaatggcaaaatatagattttg |
100 |
Q |
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| T |
26881822 |
cagagaagaagcaatcaacagagaagggagattagtgaacttctgtggtcaagcggtctggtgtgtaaatttaatatgaaatggcaaaatatagattttg |
26881921 |
T |
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| Q |
101 |
attggacaactatttaaacataaacatggtttacactgtacatgcatctcctttaaacactcgttaacataagccttgttataatatgaaaaatgttgca |
200 |
Q |
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|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||| |||||||||||||||||||||||| |||| |
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| T |
26881922 |
attggacaactatttaaacataaacatggtttacactgtacatgcatctcctttaaacacctgttaacatcagccttgttataatatgaaaaatgctgca |
26882021 |
T |
|
| Q |
201 |
tgtatcgaaccagttgtcccgaaagtatcacgatagcataac-agtactgtagttgggcccatccattttcatagctcccgtgatttgtggtcaggagag |
299 |
Q |
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||||||||||| |||||||||||||||||||||||||||||| |||||||||||||||||||||||| ||||||||||||||||||||||||| |||||| |
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| T |
26882022 |
tgtatcgaacccgttgtcccgaaagtatcacgatagcataactagtactgtagttgggcccatccatcttcatagctcccgtgatttgtggtc-ggagag |
26882120 |
T |
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| Q |
300 |
gattttgattggttaactaccatttcacaagtgcttcgtga |
340 |
Q |
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||||||||| |||| |||||||||| |||| ||||||||| |
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| T |
26882121 |
gattttgatcggttgactaccattttgcaagcgcttcgtga |
26882161 |
T |
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