View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF14609_high_9 (Length: 313)
Name: NF14609_high_9
Description: NF14609
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF14609_high_9 |
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Alignment Details
Target: chr5 (Bit Score: 137; Significance: 2e-71; HSPs: 1)
Name: chr5
Description:
Target: chr5; HSP #1
Raw Score: 137; E-Value: 2e-71
Query Start/End: Original strand, 152 - 308
Target Start/End: Original strand, 8255728 - 8255884
Alignment:
| Q |
152 |
tgccacctaagcaataaatcagcactacgtattcattgtataacaggaaaaatagataggcatatttttctctgtcaaaaatatattttgacatttctca |
251 |
Q |
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| T |
8255728 |
tgccacctaagcaataaatcagcactacgtattcattgtataacaggaaaaatagataggcttatttttctatgacaaaaatattttttgacatttctca |
8255827 |
T |
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| Q |
252 |
aagacgaaatttcatctgactttttagtttcgggacgaaaataattctttactctaa |
308 |
Q |
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| T |
8255828 |
aagacgaaatttcatctgactttttagtttcgggacgaaaattattctttactctaa |
8255884 |
T |
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