View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF1460_high_36 (Length: 248)
Name: NF1460_high_36
Description: NF1460
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF1460_high_36 |
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Alignment Details
Target: chr7 (Bit Score: 202; Significance: 1e-110; HSPs: 1)
Name: chr7
Description:
Target: chr7; HSP #1
Raw Score: 202; E-Value: 1e-110
Query Start/End: Original strand, 1 - 232
Target Start/End: Original strand, 44488965 - 44489196
Alignment:
| Q |
1 |
tgaaaatgtgtttataaatgaagacaatatatcttcattgtaaaagctgattttgtaaggattgaattagacctaaccaaaagatgtata----gtttct |
96 |
Q |
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|||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||| |
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| T |
44488965 |
tgaaaatgtgtttataaatgaagacaat----cttcattgtaaaagctgattttgtaaggattgaattagacctaaccaaaagatgtatatatagtttct |
44489060 |
T |
|
| Q |
97 |
gaaaatgaaataaaaattgttttcttaccaaatgttggggaattaaaagttgtccatccatcaccaacactgtgattgccggtgataattgttcggttga |
196 |
Q |
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|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
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| T |
44489061 |
gaaaatgaaataaaaattgttttcttaccaaatgttggggaattaaaagttgtccatccatcaccaacactgtgattgccggtgataattgttcggttga |
44489160 |
T |
|
| Q |
197 |
ttccatctccgatcatcatcagatacgccttgtttt |
232 |
Q |
| |
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|||||||||||||||||||||||||||||||||||| |
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| T |
44489161 |
ttccatctccgatcatcatcagatacgccttgtttt |
44489196 |
T |
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