View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF1460_low_54 (Length: 262)
Name: NF1460_low_54
Description: NF1460
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF1460_low_54 |
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| [»] chr7 (1 HSPs) |
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Alignment Details
Target: chr7 (Bit Score: 230; Significance: 1e-127; HSPs: 1)
Name: chr7
Description:
Target: chr7; HSP #1
Raw Score: 230; E-Value: 1e-127
Query Start/End: Original strand, 14 - 262
Target Start/End: Original strand, 45955206 - 45955461
Alignment:
| Q |
14 |
gagaagaagctaaaggagggaaagatagttgattctgttggagtgccaccaatcttgccatgtttggttgtgaggtgtgtataggatgaaattaattatg |
113 |
Q |
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| T |
45955206 |
gagaagaagctaaaggagggaaagatagttgattctgttggagtgccaccaatcttgccatgtttggttgtgaggtgtgtataggatgaaattaattatg |
45955305 |
T |
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| Q |
114 |
aagtttgaagtgtgtttcatttcctcttattatgttgcgataagactaggacttacctccacctcacttcccttcaattcacagcctttcatttccctcc |
213 |
Q |
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|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
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| T |
45955306 |
aagtttgaagtgtgtttcatttcctcttattatgttgcgataagactaggacttacctccacctcacttcccttcaattcacagcctttcatttccctcc |
45955405 |
T |
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| Q |
214 |
atcttttaacaccttttttagaat-------ataataataaaatcatttattaatt |
262 |
Q |
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|||||||||||||||||||||||| ||||||||||||||||||||||||| |
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| T |
45955406 |
atcttttaacaccttttttagaataataataataataataaaatcatttattaatt |
45955461 |
T |
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