View Alignment

This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.

Legend
 Query
 Query hiting target  Query hiting target's complemental strand
 Query's complemental strand hiting target  Query's complemental strand hiting target's complemental strand

Alignment Overview

Query: NF1460_low_75 (Length: 237)

Name: NF1460_low_75
Description: NF1460
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)


[»] NF1460_low_75
NF1460_low_75
[»] chr8 (7 HSPs)
chr8 (65-123)||(15920076-15920134)
chr8 (65-122)||(3501388-3501446)
chr8 (65-123)||(2442258-2442317)
chr8 (65-122)||(4438548-4438606)
chr8 (65-122)||(34882300-34882358)
chr8 (96-129)||(32161944-32161977)
chr8 (65-101)||(36067982-36068018)
[»] chr3 (7 HSPs)
chr3 (65-126)||(17583220-17583282)
chr3 (65-122)||(51103422-51103479)
chr3 (65-123)||(49428590-49428649)
chr3 (74-123)||(7137424-7137473)
chr3 (65-122)||(13867235-13867292)
chr3 (65-118)||(42933942-42933995)
chr3 (66-106)||(54114370-54114410)
[»] chr1 (6 HSPs)
chr1 (65-129)||(25788979-25789042)
chr1 (64-101)||(10427375-10427412)
chr1 (65-123)||(4968695-4968754)
chr1 (65-101)||(31239099-31239135)
chr1 (65-120)||(35056191-35056247)
chr1 (65-120)||(44717358-44717414)
[»] chr7 (6 HSPs)
chr7 (65-123)||(36925323-36925382)
chr7 (69-123)||(29285584-29285639)
chr7 (64-122)||(32358869-32358928)
chr7 (64-122)||(35338368-35338427)
chr7 (64-98)||(3434060-3434094)
chr7 (65-122)||(38237480-38237538)
[»] chr2 (5 HSPs)
chr2 (65-122)||(23914591-23914649)
chr2 (72-123)||(26966406-26966458)
chr2 (65-122)||(744903-744961)
chr2 (74-123)||(33201637-33201686)
chr2 (65-101)||(18612408-18612444)
[»] chr4 (3 HSPs)
chr4 (87-123)||(37441921-37441957)
chr4 (66-123)||(11075144-11075201)
chr4 (64-93)||(26509615-26509644)
[»] scaffold1017 (1 HSPs)
scaffold1017 (65-123)||(2039-2098)
[»] chr6 (4 HSPs)
chr6 (64-122)||(32279610-32279669)
chr6 (73-123)||(34672595-34672646)
chr6 (65-122)||(8866864-8866922)
chr6 (67-123)||(22793683-22793740)
[»] chr5 (7 HSPs)
chr5 (64-122)||(14001116-14001175)
chr5 (65-123)||(27175183-27175242)
chr5 (65-123)||(39178127-39178186)
chr5 (65-123)||(39850414-39850473)
chr5 (65-123)||(42522714-42522773)
chr5 (65-120)||(833878-833934)
chr5 (64-123)||(16321018-16321078)
[»] scaffold0018 (1 HSPs)
scaffold0018 (65-117)||(36811-36864)


Alignment Details
Target: chr8 (Bit Score: 43; Significance: 0.000000000000001; HSPs: 7)
Name: chr8
Description:

Target: chr8; HSP #1
Raw Score: 43; E-Value: 0.000000000000001
Query Start/End: Original strand, 65 - 123
Target Start/End: Complemental strand, 15920134 - 15920076
Alignment:
Q  65 aatataacaaatataatataagttcttatcattttaataacaacaacaatataacatta 123  Q
    |||||||||||||||||| || |||||||| ||||||||||| ||||||||||||||||    
T  15920134 aatataacaaatataataaaaattcttatctttttaataacaccaacaatataacatta 15920076  T

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Target: chr8; HSP #2
Raw Score: 39; E-Value: 0.0000000000003
Query Start/End: Original strand, 65 - 122
Target Start/End: Original strand, 3501388 - 3501446
Alignment:
Q  65 aatataacaaatataatataagttcttatcatttt-aataacaacaacaatataacatt 122  Q
    ||||||||||||||||||||||||||||||||||| ||| ||| |||||| ||||||||    
T  3501388 aatataacaaatataatataagttcttatcattttgaatgacaccaacaaaataacatt 3501446  T

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Target: chr8; HSP #3
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 65 - 123
Target Start/End: Complemental strand, 2442317 - 2442258
Alignment:
Q  65 aatataacaaatataatataagttcttatcatttt-aataacaacaacaatataacatta 123  Q
    ||||||||||||||||||||| || ||||| |||| ||||||| ||||||||||||||||    
T  2442317 aatataacaaatataatataaatttttatcttttttaataacatcaacaatataacatta 2442258  T

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Target: chr8; HSP #4
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 65 - 122
Target Start/End: Complemental strand, 4438606 - 4438548
Alignment:
Q  65 aatataacaaatataatataagttcttatc-attttaataacaacaacaatataacatt 122  Q
    ||||||||||||||||||||| ||||||||  ||||||| | | |||||||||||||||    
T  4438606 aatataacaaatataatataaattcttatcttttttaatgataccaacaatataacatt 4438548  T

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Target: chr8; HSP #5
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 65 - 122
Target Start/End: Complemental strand, 34882358 - 34882300
Alignment:
Q  65 aatataacaaatataatataagttcttatcatttt-aataacaacaacaatataacatt 122  Q
    ||||||||||||||||||||| || |||||||||| ||| ||| ||||||| |||||||    
T  34882358 aatataacaaatataatataaattattatcattttgaatgacatcaacaatgtaacatt 34882300  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #6
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 96 - 129
Target Start/End: Complemental strand, 32161977 - 32161944
Alignment:
Q  96 ttttaataacaacaacaatataacattactacag 129  Q
    |||||||||||||||||||||||||||| |||||    
T  32161977 ttttaataacaacaacaatataacattattacag 32161944  T

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Target: chr8; HSP #7
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 65 - 101
Target Start/End: Complemental strand, 36068018 - 36067982
Alignment:
Q  65 aatataacaaatataatataagttcttatcattttaa 101  Q
    |||||| ||||||||||||||||||||||| ||||||    
T  36068018 aatatagcaaatataatataagttcttatctttttaa 36067982  T

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Target: chr3 (Bit Score: 39; Significance: 0.0000000000003; HSPs: 7)
Name: chr3
Description:

Target: chr3; HSP #1
Raw Score: 39; E-Value: 0.0000000000003
Query Start/End: Original strand, 65 - 126
Target Start/End: Complemental strand, 17583282 - 17583220
Alignment:
Q  65 aatataacaaatataatataagttcttatcatttt-aataacaacaacaatataacattacta 126  Q
    |||||||||||||||||| || |||||||| |||| ||||||| |||||||||||||||||||    
T  17583282 aatataacaaatataataaaaattcttatcttttttaataacaccaacaatataacattacta 17583220  T

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Target: chr3; HSP #2
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 65 - 122
Target Start/End: Complemental strand, 51103479 - 51103422
Alignment:
Q  65 aatataacaaatataatataagttcttatcattttaataacaacaacaatataacatt 122  Q
    |||||||||||||||||||||||||||||  |||| |||||| |||||| ||||||||    
T  51103479 aatataacaaatataatataagttcttatattttttataacaccaacaaaataacatt 51103422  T

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Target: chr3; HSP #3
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 65 - 123
Target Start/End: Complemental strand, 49428649 - 49428590
Alignment:
Q  65 aatataacaaatataatataagttcttatcatttt-aataacaacaacaatataacatta 123  Q
    |||||||||||||||| | || |||||||| |||| ||||||| ||||||||||||||||    
T  49428649 aatataacaaatataagaaaaattcttatcttttttaataacagcaacaatataacatta 49428590  T

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Target: chr3; HSP #4
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 74 - 123
Target Start/End: Original strand, 7137424 - 7137473
Alignment:
Q  74 aatataatataagttcttatcattttaataacaacaacaatataacatta 123  Q
    ||||||| | ||||||||||| || |||||||| ||||||||||||||||    
T  7137424 aatataacaaaagttcttatctttctaataacaccaacaatataacatta 7137473  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #5
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 65 - 122
Target Start/End: Complemental strand, 13867292 - 13867235
Alignment:
Q  65 aatataacaaatataatataagttcttatcattttaataacaacaacaatataacatt 122  Q
    ||||||||||||||||||||| |||||||  ||| ||| ||| ||| |||||||||||    
T  13867292 aatataacaaatataatataaattcttatattttgaatgacaccaataatataacatt 13867235  T

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Target: chr3; HSP #6
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 65 - 118
Target Start/End: Complemental strand, 42933995 - 42933942
Alignment:
Q  65 aatataacaaatataatataagttcttatcattttaataacaacaacaatataa 118  Q
    ||||||||||||| |||| || |||||||| ||||||| ||| |||||||||||    
T  42933995 aatataacaaatagaataaaaattcttatctttttaatcacaccaacaatataa 42933942  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #7
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 66 - 106
Target Start/End: Complemental strand, 54114410 - 54114370
Alignment:
Q  66 atataacaaatataatataagttcttatcattttaataaca 106  Q
    |||||||||||||||||||| |||||||  |||||||||||    
T  54114410 atataacaaatataatataaattcttatttttttaataaca 54114370  T

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Target: chr1 (Bit Score: 37; Significance: 0.000000000005; HSPs: 6)
Name: chr1
Description:

Target: chr1; HSP #1
Raw Score: 37; E-Value: 0.000000000005
Query Start/End: Original strand, 65 - 129
Target Start/End: Complemental strand, 25789042 - 25788979
Alignment:
Q  65 aatataacaaatataatataagttcttatcattttaataacaacaacaatataacattactacag 129  Q
    |||||||||||||||||| || ||||| || ||||||||||| |||||||||||||||| |||||    
T  25789042 aatataacaaatataatacaaattcttttc-ttttaataacaccaacaatataacattattacag 25788979  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #2
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 64 - 101
Target Start/End: Complemental strand, 10427412 - 10427375
Alignment:
Q  64 aaatataacaaatataatataagttcttatcattttaa 101  Q
    ||||||||||||||||||||||||||||||| ||||||    
T  10427412 aaatataacaaatataatataagttcttatctttttaa 10427375  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #3
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 65 - 123
Target Start/End: Original strand, 4968695 - 4968754
Alignment:
Q  65 aatataacaaatataatataagttcttatc-attttaataacaacaacaatataacatta 123  Q
    |||||||||||||||| | || |||||||| || ||||||||| ||||||||||||||||    
T  4968695 aatataacaaatataacaaaaattcttatctatcttaataacaccaacaatataacatta 4968754  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #4
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 65 - 101
Target Start/End: Complemental strand, 31239135 - 31239099
Alignment:
Q  65 aatataacaaatataatataagttcttatcattttaa 101  Q
    ||||||||||||||||||||| |||||||| ||||||    
T  31239135 aatataacaaatataatataaattcttatctttttaa 31239099  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #5
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 65 - 120
Target Start/End: Original strand, 35056191 - 35056247
Alignment:
Q  65 aatataacaaatataatataagttcttatc-attttaataacaacaacaatataaca 120  Q
    |||||| ||||||| |||||| |||||||  |||||||| |||||||||||||||||    
T  35056191 aatatatcaaatatgatataaattcttatttattttaatgacaacaacaatataaca 35056247  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #6
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 65 - 120
Target Start/End: Original strand, 44717358 - 44717414
Alignment:
Q  65 aatataacaaatataatataagttcttatcatttt-aataacaacaacaatataaca 120  Q
    ||||||||||||| |||| || |||||||| |||| ||||||| |||||||||||||    
T  44717358 aatataacaaataaaataaaaattcttatcttttttaataacaccaacaatataaca 44717414  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7 (Bit Score: 36; Significance: 0.00000000002; HSPs: 6)
Name: chr7
Description:

Target: chr7; HSP #1
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 65 - 123
Target Start/End: Original strand, 36925323 - 36925382
Alignment:
Q  65 aatataacaaatataatataagttcttatcatttt-aataacaacaacaatataacatta 123  Q
    |||||||||||||||| |||| |||||||| |||| |||||||||||||| |||||||||    
T  36925323 aatataacaaatataacataaattcttatctttttgaataacaacaacaaaataacatta 36925382  T

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Target: chr7; HSP #2
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 69 - 123
Target Start/End: Complemental strand, 29285639 - 29285584
Alignment:
Q  69 taacaaatataatataagttcttatcatttt-aataacaacaacaatataacatta 123  Q
    ||||||||||||||||| |||||||  |||| ||||||| ||||||||||||||||    
T  29285639 taacaaatataatataaattcttatgtttttcaataacaccaacaatataacatta 29285584  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #3
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 64 - 122
Target Start/End: Complemental strand, 32358928 - 32358869
Alignment:
Q  64 aaatataacaaatataatataagttcttatcatttt-aataacaacaacaatataacatt 122  Q
    ||||||| |||||||||||||| |||||||| |||| ||| ||||||| |||||||||||    
T  32358928 aaatataccaaatataatataaattcttatctttttcaatgacaacaaaaatataacatt 32358869  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #4
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 64 - 122
Target Start/End: Complemental strand, 35338427 - 35338368
Alignment:
Q  64 aaatataacaaatataatataagttcttatc-attttaataacaacaacaatataacatt 122  Q
    |||||||| ||||||||||||| ||||||||  ||||||| ||| |||||||||||||||    
T  35338427 aaatataataaatataatataaattcttatcttttttaatgacaccaacaatataacatt 35338368  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #5
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 64 - 98
Target Start/End: Complemental strand, 3434094 - 3434060
Alignment:
Q  64 aaatataacaaatataatataagttcttatcattt 98  Q
    |||||||||||||||||||||| ||||||||||||    
T  3434094 aaatataacaaatataatataaattcttatcattt 3434060  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #6
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 65 - 122
Target Start/End: Original strand, 38237480 - 38237538
Alignment:
Q  65 aatataacaaatataatataagttcttatcatttt-aataacaacaacaatataacatt 122  Q
    ||||||||||||||||||||| |||||||| |||| ||| ||| ||||| |||||||||    
T  38237480 aatataacaaatataatataaattcttatctttttcaatgacaccaacagtataacatt 38237538  T

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Target: chr2 (Bit Score: 35; Significance: 0.00000000008; HSPs: 5)
Name: chr2
Description:

Target: chr2; HSP #1
Raw Score: 35; E-Value: 0.00000000008
Query Start/End: Original strand, 65 - 122
Target Start/End: Complemental strand, 23914649 - 23914591
Alignment:
Q  65 aatataacaaatataatataagttcttatcatttt-aataacaacaacaatataacatt 122  Q
    ||||||||||||||||||||| |||||||| |||| |||||||  ||||||||||||||    
T  23914649 aatataacaaatataatataaattcttatctttttcaataacacaaacaatataacatt 23914591  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #2
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 72 - 123
Target Start/End: Original strand, 26966406 - 26966458
Alignment:
Q  72 caaatataatataagttcttatca-ttttaataacaacaacaatataacatta 123  Q
    |||||||||||||| ||||||||| |||||||| || ||||||||||||||||    
T  26966406 caaatataatataaattcttatcatttttaatatcaccaacaatataacatta 26966458  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #3
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 65 - 122
Target Start/End: Original strand, 744903 - 744961
Alignment:
Q  65 aatataacaaatataatataagttcttatcatttt-aataacaacaacaatataacatt 122  Q
    |||||| |||||||||||||| || ||||| |||| ||||||| |||||||||||||||    
T  744903 aatatagcaaatataatataaatttttatctttttaaataacaccaacaatataacatt 744961  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #4
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 74 - 123
Target Start/End: Complemental strand, 33201686 - 33201637
Alignment:
Q  74 aatataatataagttcttatcattttaataacaacaacaatataacatta 123  Q
    ||||||| | || |||||||| ||||||||||| ||||||||||||||||    
T  33201686 aatataacaaaaattcttatctttttaataacaccaacaatataacatta 33201637  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #5
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 65 - 101
Target Start/End: Original strand, 18612408 - 18612444
Alignment:
Q  65 aatataacaaatataatataagttcttatcattttaa 101  Q
    ||||||||||||||||||||||||| |||| ||||||    
T  18612408 aatataacaaatataatataagttcatatctttttaa 18612444  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4 (Bit Score: 33; Significance: 0.000000001; HSPs: 3)
Name: chr4
Description:

Target: chr4; HSP #1
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 87 - 123
Target Start/End: Complemental strand, 37441957 - 37441921
Alignment:
Q  87 ttcttatcattttaataacaacaacaatataacatta 123  Q
    |||||||| ||||||||||||||||||||||||||||    
T  37441957 ttcttatctttttaataacaacaacaatataacatta 37441921  T

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Target: chr4; HSP #2
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 66 - 123
Target Start/End: Original strand, 11075144 - 11075201
Alignment:
Q  66 atataacaaatataatataagttcttatcattttaataacaacaacaatataacatta 123  Q
    ||||||||||||||| | || |||||||  ||||||||||| |||| |||||||||||    
T  11075144 atataacaaatataacaaaaattcttatttttttaataacaccaacgatataacatta 11075201  T

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Target: chr4; HSP #3
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 64 - 93
Target Start/End: Original strand, 26509615 - 26509644
Alignment:
Q  64 aaatataacaaatataatataagttcttat 93  Q
    ||||||||||||||||||||||||||||||    
T  26509615 aaatataacaaatataatataagttcttat 26509644  T

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Target: scaffold1017 (Bit Score: 32; Significance: 0.000000005; HSPs: 1)
Name: scaffold1017
Description:

Target: scaffold1017; HSP #1
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 65 - 123
Target Start/End: Original strand, 2039 - 2098
Alignment:
Q  65 aatataacaaatataatataagttcttatc-attttaataacaacaacaatataacatta 123  Q
    |||||||||||||||||| || ||||||||  |||||||||||  |||||||||||||||    
T  2039 aatataacaaatataataaaaattcttatcttttttaataacacaaacaatataacatta 2098  T

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Target: chr6 (Bit Score: 32; Significance: 0.000000005; HSPs: 4)
Name: chr6
Description:

Target: chr6; HSP #1
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 64 - 122
Target Start/End: Original strand, 32279610 - 32279669
Alignment:
Q  64 aaatataacaaatataatataagttcttatc-attttaataacaacaacaatataacatt 122  Q
    |||||||||||||||||||||| ||||||||  ||||||| ||| |||||| ||||||||    
T  32279610 aaatataacaaatataatataaattcttatcttttttaatgacaccaacaaaataacatt 32279669  T

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Target: chr6; HSP #2
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 73 - 123
Target Start/End: Original strand, 34672595 - 34672646
Alignment:
Q  73 aaatataatataagttcttatca-ttttaataacaacaacaatataacatta 123  Q
    ||||||||||||| ||||||||| |||||||| || ||||||||||||||||    
T  34672595 aaatataatataaattcttatcatttttaatatcatcaacaatataacatta 34672646  T

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Target: chr6; HSP #3
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 65 - 122
Target Start/End: Original strand, 8866864 - 8866922
Alignment:
Q  65 aatataacaaatataatataagttcttatc-attttaataacaacaacaatataacatt 122  Q
    ||||||||||||||||||||| ||||||||  ||||||| ||| |||||||| ||||||    
T  8866864 aatataacaaatataatataaattcttatcttttttaatgacaccaacaataaaacatt 8866922  T

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Target: chr6; HSP #4
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 67 - 123
Target Start/End: Original strand, 22793683 - 22793740
Alignment:
Q  67 tataacaaatataatataagttcttatcattttaa-taacaacaacaatataacatta 123  Q
    ||||| |||||||||| || |||||||| |||||| ||||| ||||||||||||||||    
T  22793683 tataataaatataataaaaattcttatctttttaaataacaccaacaatataacatta 22793740  T

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Target: chr5 (Bit Score: 32; Significance: 0.000000005; HSPs: 7)
Name: chr5
Description:

Target: chr5; HSP #1
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 64 - 122
Target Start/End: Original strand, 14001116 - 14001175
Alignment:
Q  64 aaatataacaaatataatataagttcttatcatttt-aataacaacaacaatataacatt 122  Q
    |||||||||||||||||||||| |||||||| |||| ||| ||| |||||| ||||||||    
T  14001116 aaatataacaaatataatataaattcttatctttttgaatgacatcaacaaaataacatt 14001175  T

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Target: chr5; HSP #2
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 65 - 123
Target Start/End: Complemental strand, 27175242 - 27175183
Alignment:
Q  65 aatataacaaatataatataagttcttatcatttt-aataacaacaacaatataacatta 123  Q
    |||||||||||||||| | || |||||||| |||| ||||||| ||||||||||||||||    
T  27175242 aatataacaaatataacaaaaattcttatcttttttaataacaccaacaatataacatta 27175183  T

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Target: chr5; HSP #3
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 65 - 123
Target Start/End: Original strand, 39178127 - 39178186
Alignment:
Q  65 aatataacaaatataatataagttcttatc-attttaataacaacaacaatataacatta 123  Q
    |||||||||||||||| | || || ||||| |||||||||||| ||||||||||||||||    
T  39178127 aatataacaaatataacaaaaattattatctattttaataacatcaacaatataacatta 39178186  T

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Target: chr5; HSP #4
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 65 - 123
Target Start/End: Complemental strand, 39850473 - 39850414
Alignment:
Q  65 aatataacaaatataatataagttcttatca-ttttaataacaacaacaatataacatta 123  Q
    ||||||| ||||||||||||| ||||||||| ||||||||||   |||||||||||||||    
T  39850473 aatataataaatataatataaattcttatcatttttaataactttaacaatataacatta 39850414  T

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Target: chr5; HSP #5
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 65 - 123
Target Start/End: Original strand, 42522714 - 42522773
Alignment:
Q  65 aatataacaaatataatataagttcttatcatttt-aataacaacaacaatataacatta 123  Q
    |||||||||||||||||| || |||||||  |||| ||||||| ||||||||||||||||    
T  42522714 aatataacaaatataataaaaattcttatattttttaataacaccaacaatataacatta 42522773  T

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Target: chr5; HSP #6
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 65 - 120
Target Start/End: Complemental strand, 833934 - 833878
Alignment:
Q  65 aatataacaaatataatataagttcttatcatttt-aataacaacaacaatataaca 120  Q
    ||||||||||||||||| ||| |||||||| |||| ||| ||| |||||||||||||    
T  833934 aatataacaaatataatctaaattcttatctttttgaatgacaccaacaatataaca 833878  T

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Target: chr5; HSP #7
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 64 - 123
Target Start/End: Original strand, 16321018 - 16321078
Alignment:
Q  64 aaatataacaaatataatataagttcttatcatttt-aataacaacaacaatataacatta 123  Q
    |||||||||||||| ||||||| |||||||  |||| ||| ||| ||||||||||||||||    
T  16321018 aaatataacaaatacaatataatttcttatatttttcaatgacaccaacaatataacatta 16321078  T

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Target: scaffold0018 (Bit Score: 30; Significance: 0.00000008; HSPs: 1)
Name: scaffold0018
Description:

Target: scaffold0018; HSP #1
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 65 - 117
Target Start/End: Complemental strand, 36864 - 36811
Alignment:
Q  65 aatataacaaatataatataagttcttatc-attttaataacaacaacaatata 117  Q
    |||||||||||||||||| || ||||||||  ||||||||||| ||||||||||    
T  36864 aatataacaaatataataaaaattcttatcttttttaataacaccaacaatata 36811  T

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