View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF1460_low_96 (Length: 201)
Name: NF1460_low_96
Description: NF1460
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF1460_low_96 |
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Alignment Details
Target: chr7 (Bit Score: 122; Significance: 8e-63; HSPs: 1)
Name: chr7
Description:
Target: chr7; HSP #1
Raw Score: 122; E-Value: 8e-63
Query Start/End: Original strand, 20 - 173
Target Start/End: Complemental strand, 23940277 - 23940124
Alignment:
| Q |
20 |
cagaattaactatggagtttgaataatgtattgtacgagtgagacacatgttctggtaggttatgacatttttcatattcattaaacatgacattgtcac |
119 |
Q |
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| T |
23940277 |
cagaattaactatggagtttgaataatgtattgtacgagcgagacacatgttctagtaggttatgacatttttcatattcattaaacatggcattgtcac |
23940178 |
T |
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| Q |
120 |
aaccataagaaaattagtacccgagtacaatagtatttggtcttataagatata |
173 |
Q |
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| T |
23940177 |
taccataaaaaaattagtacccgggtacaatagtatttggtcctataaaatata |
23940124 |
T |
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