View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF14610_high_5 (Length: 336)
Name: NF14610_high_5
Description: NF14610
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF14610_high_5 |
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Alignment Details
Target: chr8 (Bit Score: 301; Significance: 1e-169; HSPs: 1)
Name: chr8
Description:
Target: chr8; HSP #1
Raw Score: 301; E-Value: 1e-169
Query Start/End: Original strand, 3 - 331
Target Start/End: Original strand, 16961393 - 16961721
Alignment:
| Q |
3 |
agtactagtgattgaagattgttaagatgtgaaagctgagatggtatttctccactaaagtaatttgagctaatgttaagtatttctagtgaagataatt |
102 |
Q |
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| T |
16961393 |
agtactaatgattgaagattgttaagatgtgaaagttgagatggtatttctccactaaagtaatttgagctaatgttaagtatttctagtgaagataatt |
16961492 |
T |
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| Q |
103 |
gagctattgtttcaggtagtggcccccataaaccaagagaaaccaaagagagtactttcaagcttgataaagtggaaagtgttgaaaagagtgtgtatga |
202 |
Q |
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| T |
16961493 |
gagctattgtttcaggtagtggcccccataaaccaagtgaaaccaaagagagtactttcaagcttgataaagtggaaagtgttgaaaagagtgtgtatga |
16961592 |
T |
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| Q |
203 |
gttgaaattttgaggcaatgaagtaaactcattgttgtttccaacaacatgcaactgtgtaacattttcttcatagcacactagtgttaaatatggagta |
302 |
Q |
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| T |
16961593 |
gttgaaattttgaggcaatgaggtgaactcattggtgtttccaacaacatgcaactgtgtaacattttcttcatagcacactagtgttaaatatggagta |
16961692 |
T |
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| Q |
303 |
ggttcaatgttgcagaaatctgtgctgct |
331 |
Q |
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|||||||||||||||||||||||| |||| |
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| T |
16961693 |
ggttcaatgttgcagaaatctgtggtgct |
16961721 |
T |
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