View Alignment

This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.

Legend
 Query
 Query hiting target  Query hiting target's complemental strand
 Query's complemental strand hiting target  Query's complemental strand hiting target's complemental strand

Alignment Overview

Query: NF14611_high_3 (Length: 318)

Name: NF14611_high_3
Description: NF14611
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)


[»] NF14611_high_3
NF14611_high_3
[»] chr6 (16 HSPs)
chr6 (1-304)||(5692963-5693266)
chr6 (77-304)||(5173980-5174207)
chr6 (79-284)||(5272849-5273054)
chr6 (87-292)||(5149754-5149959)
chr6 (87-275)||(5422050-5422238)
chr6 (87-279)||(5264313-5264505)
chr6 (175-288)||(5358190-5358303)
chr6 (87-292)||(5092785-5092987)
chr6 (87-292)||(5160550-5160755)
chr6 (87-292)||(5443951-5444156)
chr6 (87-250)||(5070511-5070674)
chr6 (87-229)||(5137715-5137857)
chr6 (136-233)||(5340450-5340547)
chr6 (87-264)||(5429446-5429623)
chr6 (87-285)||(5107839-5108037)
chr6 (140-228)||(5366406-5366494)
[»] chr4 (3 HSPs)
chr4 (87-195)||(25566888-25566996)
chr4 (92-292)||(4332498-4332698)
chr4 (228-301)||(4356737-4356810)
[»] scaffold0864 (1 HSPs)
scaffold0864 (197-285)||(4374-4462)
[»] scaffold0294 (1 HSPs)
scaffold0294 (182-217)||(3051-3086)
[»] chr2 (1 HSPs)
chr2 (197-285)||(22589169-22589257)


Alignment Details
Target: chr6 (Bit Score: 288; Significance: 1e-161; HSPs: 16)
Name: chr6
Description:

Target: chr6; HSP #1
Raw Score: 288; E-Value: 1e-161
Query Start/End: Original strand, 1 - 304
Target Start/End: Complemental strand, 5693266 - 5692963
Alignment:
Q  1 tttaaaattttgtaccacccgtgcctctgaaacaaacacagagattttggacagagagactttggacagaggattgttaaggagcaatgacgtgttctta 100  Q
    |||||||||| || |||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  5693266 tttaaaatttggtcccacccgtgcctctgaaacaaacacagagactttggacagagagactttggacagaggattgttaaggagcaatgacgtgttctta 5693167  T
Q  101 agttttcgaggggaagacacccgtgcttcaatcgtttcacatctatatgcttctcttctaaatgctggagttttcgtttttatggacgatgattcacttc 200  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  5693166 agttttcgaggggaagacacccgtgcttcaatcgtttcacatctatatgcttctcttctaaatgctggagttttcgtttttatggacgatgattcacttc 5693067  T
Q  201 caagtggagatcacattgcaacatcactactacaagcaatcgaagagtctataatttctgttatagttttctcaaaaaactatgcagattcgtcgtggtg 300  Q
    |||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  5693066 caagaggagatcacattgcaacatcactactacaagcaatcgaagagtctataatttctgttatagttttctcaaaaaactatgcagattcgtcgtggtg 5692967  T
Q  301 tttg 304  Q
    ||||    
T  5692966 tttg 5692963  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #2
Raw Score: 92; E-Value: 1e-44
Query Start/End: Original strand, 77 - 304
Target Start/End: Original strand, 5173980 - 5174207
Alignment:
Q  77 ttaaggagcaatgacgtgttcttaagttttcgaggggaagacacccgtgcttcaatcgtttcacatctatatgcttctcttctaaatgctggagttttcg 176  Q
    ||||||||| |||| ||||||||||||||  |||| || ||||| ||  ||||| ||  |||||| ||||| |||||||||| |||   |||| ||  ||    
T  5173980 ttaaggagctatgaagtgttcttaagtttcagaggcgaggacacgcgcacttcattcacttcacacctatacgcttctcttcaaaacaatggaattagcg 5174079  T
Q  177 tttttatggacgatgattcacttccaagtggagatcacattgcaacatcactactacaagcaatcgaagagtctataatttctgttatagttttctcaaa 276  Q
    |||||| ||||||||||||||||| ||| |||||||||||| ||| |||||||||||||||||| |||||||||  ||||||||||||  ||||||||||    
T  5174080 tttttaaggacgatgattcacttcaaagaggagatcacatttcaaaatcactactacaagcaattgaagagtctcaaatttctgttatcattttctcaaa 5174179  T
Q  277 aaactatgcagattcgtcgtggtgtttg 304  Q
    |||||||||||||||   ||||||||||    
T  5174180 aaactatgcagattcacggtggtgtttg 5174207  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #3
Raw Score: 66; E-Value: 4e-29
Query Start/End: Original strand, 79 - 284
Target Start/End: Original strand, 5272849 - 5273054
Alignment:
Q  79 aaggagcaatgacgtgttcttaagttttcgaggggaagacacccgtgcttcaatcgtttcacatctatatgcttctcttctaaatgctggagttttcgtt 178  Q
    ||||||| |||| ||||||||||||||  |||| || ||||| ||  ||||| ||  |||||||||||| |||||||||| |||   |||| ||  ||||    
T  5272849 aaggagctatgaagtgttcttaagtttcagaggcgaggacacgcgcacttcattcacttcacatctatacgcttctcttcaaaacaatggaattaacgtt 5272948  T
Q  179 tttatggacgatgattcacttccaagtggagatcacattgcaacatcactactacaagcaatcgaagagtctataatttctgttatagttttctcaaaaa 278  Q
    |||| |||| |||||| ||||| ||| |||||||||||| ||| ||||||||||| |||||| |||  ||||  ||||||||||||  ||||||||||||    
T  5272949 tttaaggacaatgatttacttcaaagaggagatcacatttcaaaatcactactactagcaattgaaaggtctcaaatttctgttatcattttctcaaaaa 5273048  T
Q  279 actatg 284  Q
    ||||||    
T  5273049 actatg 5273054  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #4
Raw Score: 54; E-Value: 5e-22
Query Start/End: Original strand, 87 - 292
Target Start/End: Complemental strand, 5149959 - 5149754
Alignment:
Q  87 atgacgtgttcttaagttttcgaggggaagacacccgtgcttcaatcgtttcacatctatatgcttctcttctaaatgctggagttttcgtttttatgga 186  Q
    |||| ||||||||||||||| |||||||||| || || || ||| ||  ||||||||| ||||||||||||| |||||||||| ||   ||||||| |||    
T  5149959 atgaagtgttcttaagttttagaggggaagatacgcgcgcatcattcacttcacatctctatgcttctcttcaaaatgctggaattaaagtttttaggga 5149860  T
Q  187 cgatgattcacttccaagtggagatcacattgcaacatcactactacaagcaatcgaagagtctataatttctgttatagttttctcaaaaaactatgca 286  Q
     |||||||| |||  ||| |||||||||||| |||||||| |||  | ||| ||| || |||||   || ||||| || ||||| |||| ||||||||||    
T  5149859 tgatgattctcttaaaagaggagatcacatttcaacatcaatacatctagctatccaaaagtctcagatctctgtgattgttttttcaagaaactatgca 5149760  T
Q  287 gattcg 292  Q
     |||||    
T  5149759 aattcg 5149754  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #5
Raw Score: 53; E-Value: 2e-21
Query Start/End: Original strand, 87 - 275
Target Start/End: Original strand, 5422050 - 5422238
Alignment:
Q  87 atgacgtgttcttaagttttcgaggggaagacacccgtgcttcaatcgtttcacatctatatgcttctcttctaaatgctggagttttcgtttttatgga 186  Q
    |||| ||||||||||||||| |||| || || || ||||| ||| ||  ||||||||| ||||||||||||| ||||   ||| ||   ||||| | |||    
T  5422050 atgatgtgttcttaagttttagaggagaggatactcgtgcatcattcacttcacatctctatgcttctcttcaaaattacggaattaaagttttcaggga 5422149  T
Q  187 cgatgattcacttccaagtggagatcacattgcaacatcactactacaagcaatcgaagagtctataatttctgttatagttttctcaa 275  Q
    ||||||||| |||| ||| |||||||||||| |||||||||| |||| |||||| ||| |||||  ||| ||| | |||||||||||||    
T  5422150 cgatgattcgcttcaaagaggagatcacatttcaacatcactcctacgagcaattgaacagtctcgaatgtctatcatagttttctcaa 5422238  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #6
Raw Score: 49; E-Value: 5e-19
Query Start/End: Original strand, 87 - 279
Target Start/End: Complemental strand, 5264505 - 5264313
Alignment:
Q  87 atgacgtgttcttaagttttcgaggggaagacacccgtgcttcaatcgtttcacatctatatgcttctcttctaaatgctggagttttcgtttttatgga 186  Q
    |||||||||||||||||||  | || || || || ||| ||||  |||||||||||||||||||  |||||| |||||||||| ||   |||||||  ||    
T  5264505 atgacgtgttcttaagtttcaggggagaggatactcgttcttccttcgtttcacatctatatgcagctcttcaaaatgctggaattaaagtttttagaga 5264406  T
Q  187 cgatgattcacttccaagtggagatcacattgcaacatcactactacaagcaatcgaagagtctataatttctgttatagttttctcaaaaaa 279  Q
    |||| ||   |||| ||| |||||||||||| |||||||| || |||  ||||| |||||||| | ||||||| | || ||||||||||||||    
T  5264405 cgataatgagcttcaaagaggagatcacatttcaacatcattattacgtgcaattgaagagtccaaaatttctttaattgttttctcaaaaaa 5264313  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #7
Raw Score: 46; E-Value: 3e-17
Query Start/End: Original strand, 175 - 288
Target Start/End: Complemental strand, 5358303 - 5358190
Alignment:
Q  175 cgtttttatggacgatgattcacttccaagtggagatcacattgcaacatcactactacaagcaatcgaagagtctataatttctgttatagttttctca 274  Q
    |||||||| ||| ||| ||||||||| ||| |||||||||||| ||| ||||||| | ||||||||  |||| |||  |||||||||||| |||||||||    
T  5358303 cgtttttaaggatgatcattcacttcaaaggggagatcacatttcaaaatcactaatgcaagcaattcaagattctcaaatttctgttatcgttttctca 5358204  T
Q  275 aaaaactatgcaga 288  Q
    | ||| ||||||||    
T  5358203 acaaattatgcaga 5358190  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #8
Raw Score: 44; E-Value: 5e-16
Query Start/End: Original strand, 87 - 292
Target Start/End: Original strand, 5092785 - 5092987
Alignment:
Q  87 atgacgtgttcttaagttttcgaggggaagacacccgtgcttcaatcgtttcacatctatatgcttctcttctaaatgctggagttttcgtttttatgga 186  Q
    |||| ||||||||||||||| ||||  |||| || ||||| ||| ||  ||||||||| |||||||| |||| |||||||||| ||   ||||||| |||    
T  5092785 atgaagtgttcttaagttttagaggaaaagatactcgtgcatcattcacttcacatctctatgcttcacttcaaaatgctggaattaatgtttttaggga 5092884  T
Q  187 cgatgattcacttccaagtggagatcacattgcaacatcactactacaagcaatcgaagagtctataatttctgttatagttttctcaaaaaactatgca 286  Q
     |||||||| |||| ||| |||||||| ||   | ||||| |||| |||   || |||||||||  ||||||||| || ||||| |||| ||| ||||||    
T  5092885 tgatgattcgcttcaaagaggagatcaaat---atcatcattacttcaattgattgaagagtctcgaatttctgtgattgttttttcaagaaattatgca 5092981  T
Q  287 gattcg 292  Q
    ||||||    
T  5092982 gattcg 5092987  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #9
Raw Score: 42; E-Value: 0.000000000000008
Query Start/End: Original strand, 87 - 292
Target Start/End: Complemental strand, 5160755 - 5160550
Alignment:
Q  87 atgacgtgttcttaagttttcgaggggaagacacccgtgcttcaatcgtttcacatctatatgcttctcttctaaatgctggagttttcgtttttatgga 186  Q
    |||| ||||||||||||||| ||||  |||| || ||||| ||| ||  ||||||||| |||||| | |||| ||| |||||| ||  |||||||| |||    
T  5160755 atgaagtgttcttaagttttagaggaaaagatactcgtgcatcattcacttcacatctctatgctgcacttcaaaacgctggacttaacgtttttaggga 5160656  T
Q  187 cgatgattcacttccaagtggagatcacattgcaacatcactactacaagcaatcgaagagtctataatttctgttatagttttctcaaaaaactatgca 286  Q
    ||||||||| |||  ||| |||||||| ||  |||||||| |||| ||  | || ||||| |||  ||||||||| || ||||| |||| ||| |||||     
T  5160655 cgatgattctcttgaaagaggagatcaaataccaacatcattacttcattcgattgaagaatctcgaatttctgtgattgttttttcaagaaattatgcg 5160556  T
Q  287 gattcg 292  Q
    ||||||    
T  5160555 gattcg 5160550  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #10
Raw Score: 42; E-Value: 0.000000000000008
Query Start/End: Original strand, 87 - 292
Target Start/End: Original strand, 5443951 - 5444156
Alignment:
Q  87 atgacgtgttcttaagttttcgaggggaagacacccgtgcttcaatcgtttcacatctatatgcttctcttctaaatgctggagttttcgtttttatgga 186  Q
    |||||||||||||||||||| ||||| |||| || ||||||||  ||  ||||||||| |||||| |||||| ||| |||||| ||   |||||||| ||    
T  5443951 atgacgtgttcttaagttttagagggaaagatactcgtgcttccttcacttcacatctgtatgctgctcttcaaaaggctggaattaaggtttttataga 5444050  T
Q  187 cgatgattcacttccaagtggagatcacattgcaacatcactactacaagcaatcgaagagtctataatttctgttatagttttctcaaaaaactatgca 286  Q
    |||| ||   |||| ||| ||| |||||||| || ||||| ||  || |||||| ||| | |||  ||||||| | || ||||| |||||||| |||||     
T  5444051 cgataatgagcttcaaagaggatatcacatttcatcatcattatcacgagcaattgaacaatctcaaatttctataattgttttttcaaaaaattatgct 5444150  T
Q  287 gattcg 292  Q
    ||||||    
T  5444151 gattcg 5444156  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #11
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 87 - 250
Target Start/End: Complemental strand, 5070674 - 5070511
Alignment:
Q  87 atgacgtgttcttaagttttcgaggggaagacacccgtgcttcaatcgtttcacatctatatgcttctcttctaaatgctggagttttcgtttttatgga 186  Q
    |||| ||||||||||||||  |||| || ||||| ||  ||||| ||  ||||||||| ||||||||||||| |||  ||||| |    ||||||| |||    
T  5070674 atgatgtgttcttaagtttcagaggagaggacactcgctcttcattcacttcacatctctatgcttctcttcgaaactctggaatcaaagtttttaggga 5070575  T
Q  187 cgatgattcacttccaagtggagatcacattgcaacatcactactacaagcaatcgaagagtct 250  Q
     || ||||| |||| ||| |||||||||||| |||||||||| |||| |||||| ||| |||||    
T  5070574 agacgattctcttcaaagaggagatcacatttcaacatcactcctacgagcaattgaacagtct 5070511  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #12
Raw Score: 39; E-Value: 0.0000000000005
Query Start/End: Original strand, 87 - 229
Target Start/End: Complemental strand, 5137857 - 5137715
Alignment:
Q  87 atgacgtgttcttaagttttcgaggggaagacacccgtgcttcaatcgtttcacatctatatgcttctcttctaaatgctggagttttcgtttttatgga 186  Q
    |||| |||||| | |||||||||||||||||||| ||| | ||  ||  |||||||||  |  | ||||||| ||| |||||| ||   || || |||||    
T  5137857 atgaagtgttcctgagttttcgaggggaagacactcgttcatccttcacttcacatcttcactcatctcttcaaaaggctggaattaaagtcttcatgga 5137758  T
Q  187 cgatgattcacttccaagtggagatcacattgcaacatcacta 229  Q
    |||||||||||||| ||| |||||||||||| |||||||||||    
T  5137757 cgatgattcacttcaaagaggagatcacatttcaacatcacta 5137715  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #13
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 136 - 233
Target Start/End: Original strand, 5340450 - 5340547
Alignment:
Q  136 ttcacatctatatgcttctcttctaaatgctggagttttcgtttttatggacgatgattcacttccaagtggagatcacattgcaacatcactactac 233  Q
    ||||||||| |||||| | |||| |||||||||| ||   |||||||  ||||||||||| |||| ||| || ||||| ||| |||||||||||||||    
T  5340450 ttcacatctctatgctgcacttcaaaatgctggaattactgtttttagagacgatgattcgcttcaaagaggtgatcaaatttcaacatcactactac 5340547  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #14
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 87 - 264
Target Start/End: Original strand, 5429446 - 5429623
Alignment:
Q  87 atgacgtgttcttaagttttcgaggggaagacacccgtgcttcaatcgtttcacatctatatgcttctcttctaaatgctggagttttcgtttttatgga 186  Q
    ||||||||||| |||||||| |||| ||||| || || |  ||  ||  ||||||||| ||||||||||||| |||||||||| ||   ||||||| |||    
T  5429446 atgacgtgttcctaagttttagaggcgaagatactcgaggatcgttcacttcacatctctatgcttctcttcaaaatgctggaattactgtttttaggga 5429545  T
Q  187 cgatgattcacttccaagtggagatcacattgcaacatcactactacaagcaatcgaagagtctataatttctgttat 264  Q
     |||| ||| |||  | | |||||||||||| ||||| || ||  ||| ||||| ||| |||||  ||||||||||||    
T  5429546 tgatgtttctcttaaaggaggagatcacatttcaacaacattatcacacgcaattgaacagtctcgaatttctgttat 5429623  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #15
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 87 - 285
Target Start/End: Complemental strand, 5108037 - 5107839
Alignment:
Q  87 atgacgtgttcttaagttttcgaggggaagacacccgtgcttcaatcgtttcacatctatatgcttctcttctaaatgctggagttttcgtttttatgga 186  Q
    ||||||||||| |||||||  ||||  |||| || ||||||||  ||  ||||||||| |||||||||||||  || |||||| |   ||||||||  ||    
T  5108037 atgacgtgttcctaagtttcagaggcaaagatactcgtgcttccttcacttcacatctctatgcttctcttcagaacgctggaatcaacgtttttagaga 5107938  T
Q  187 cgatgattcacttccaagtggagatcacattgcaacatcactactacaagcaatcgaagagtctataatttctgttatagttttctcaaaaaactatgc 285  Q
    ||||||||| |||  ||| ||| ||  |||| ||| |||| ||  || |||||| ||||| |||  ||||||| ||||  ||||||||||||| |||||    
T  5107937 cgatgattcgcttaaaagaggacattgcatttcaaaatcaataaaacgagcaattgaagaatctgaaatttctattatcattttctcaaaaaattatgc 5107839  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #16
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 140 - 228
Target Start/End: Original strand, 5366406 - 5366494
Alignment:
Q  140 catctatatgcttctcttctaaatgctggagttttcgtttttatggacgatgattcacttccaagtggagatcacattgcaacatcact 228  Q
    ||||| ||||||||||||| ||| || ||| ||   ||||| | |||||| ||||| |||| ||| |||||||||||| ||||||||||    
T  5366406 catctctatgcttctcttcaaaacgccggatttcgtgttttcagggacgacgattcgcttcaaagaggagatcacatttcaacatcact 5366494  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4 (Bit Score: 37; Significance: 0.000000000007; HSPs: 3)
Name: chr4
Description:

Target: chr4; HSP #1
Raw Score: 37; E-Value: 0.000000000007
Query Start/End: Original strand, 87 - 195
Target Start/End: Original strand, 25566888 - 25566996
Alignment:
Q  87 atgacgtgttcttaagttttcgaggggaagacacccgtgcttcaatcgtttcacatctatatgcttctcttctaaatgctggagttttcgtttttatgga 186  Q
    |||| ||||||||||||| | ||||||| ||||| ||||||||  ||    |||||||  ||||||||||||||||||||||| |   |||||||| |||    
T  25566888 atgaagtgttcttaagttatagaggggaggacactcgtgcttctttcaccgcacatctcaatgcttctcttctaaatgctggaatcaacgtttttaagga 25566987  T
Q  187 cgatgattc 195  Q
    |||||||||    
T  25566988 cgatgattc 25566996  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #2
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 92 - 292
Target Start/End: Original strand, 4332498 - 4332698
Alignment:
Q  92 gtgttcttaagttttcgaggggaagacacccgtgcttcaatcgtttcacatctatatgcttctcttctaaatgctggagttttcgtttttatggacgatg 191  Q
    |||||||| |||||| |||| |||||||| || || ||| ||  ||||||||| | | | ||||||| ||   ||||| || ||||||| | |||||||     
T  4332498 gtgttcttgagttttagaggcgaagacactcgcgcatcattcacttcacatctctctacatctcttcaaagctctggaattatcgttttcaaggacgatc 4332597  T
Q  192 attcacttccaagtggagatcacattgcaacatcactactacaagcaatcgaagagtctataatttctgttatagttttctcaaaaaactatgcagattc 291  Q
    |||| |||| ||| ||| ||| |||  | | | ||||||||||||||||| | ||||| | |||||||||| | || ||||| |||||||| || |||||    
T  4332598 attcccttcaaaggggacatcgcatctctaaaacactactacaagcaatccaggagtcgagaatttctgttgttgtcttctccaaaaactacgctgattc 4332697  T
Q  292 g 292  Q
    |    
T  4332698 g 4332698  T

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Target: chr4; HSP #3
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 228 - 301
Target Start/End: Original strand, 4356737 - 4356810
Alignment:
Q  228 tactacaagcaatcgaagagtctataatttctgttatagttttctcaaaaaactatgcagattcgtcgtggtgt 301  Q
    |||| ||||||||||||   |||| |||| ||||||| || ||||| ||||||||||| |||||||| ||||||    
T  4356737 tactccaagcaatcgaaatctctagaattgctgttatcgtcttctccaaaaactatgctgattcgtcatggtgt 4356810  T

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Target: scaffold0864 (Bit Score: 33; Significance: 0.000000002; HSPs: 1)
Name: scaffold0864
Description:

Target: scaffold0864; HSP #1
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 197 - 285
Target Start/End: Original strand, 4374 - 4462
Alignment:
Q  197 cttccaagtggagatcacattgcaacatcactactacaagcaatcgaagagtctataatttctgttatagttttctcaaaaaactatgc 285  Q
    |||| ||| |||||| ||||| |||||||| || |||  ||||| |||||||||  ||||||| | || ||||||||||||||||||||    
T  4374 cttcaaagaggagattacatttcaacatcattattacgtgcaattgaagagtctcaaatttctttaattgttttctcaaaaaactatgc 4462  T

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Target: scaffold0294 (Bit Score: 32; Significance: 0.000000007; HSPs: 1)
Name: scaffold0294
Description:

Target: scaffold0294; HSP #1
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 182 - 217
Target Start/End: Complemental strand, 3086 - 3051
Alignment:
Q  182 atggacgatgattcacttccaagtggagatcacatt 217  Q
    ||||||||||||||||||| ||||||||||||||||    
T  3086 atggacgatgattcacttcaaagtggagatcacatt 3051  T

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Target: chr2 (Bit Score: 29; Significance: 0.0000004; HSPs: 1)
Name: chr2
Description:

Target: chr2; HSP #1
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 197 - 285
Target Start/End: Complemental strand, 22589257 - 22589169
Alignment:
Q  197 cttccaagtggagatcacattgcaacatcactactacaagcaatcgaagagtctataatttctgttatagttttctcaaaaaactatgc 285  Q
    |||| ||| |||||| ||||| |||||||| || | |  ||||| |||||||||  ||||||| | || ||||||||||||||||||||    
T  22589257 cttcaaagaggagattacatttcaacatcattattccgtgcaattgaagagtctcaaatttctttaattgttttctcaaaaaactatgc 22589169  T

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