View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF14612_low_6 (Length: 291)
Name: NF14612_low_6
Description: NF14612
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF14612_low_6 |
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Alignment Details
Target: chr7 (Bit Score: 193; Significance: 1e-105; HSPs: 1)
Name: chr7
Description:
Target: chr7; HSP #1
Raw Score: 193; E-Value: 1e-105
Query Start/End: Original strand, 1 - 273
Target Start/End: Complemental strand, 33360012 - 33359751
Alignment:
| Q |
1 |
actttgcttcacagtcgcatgtaggagcagcactcacacgagaagtcattgttgttttgtattttgtatttttgaagaaaatatcacatcacatataaat |
100 |
Q |
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|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
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| T |
33360012 |
actttgcttcacagtcgcatgtaggagcagcactcacacgagaagtcattgttgttttgtattttgtatttttgaagaaaatatcacatcacatataaat |
33359913 |
T |
|
| Q |
101 |
nnnnnnnnnnnnnnnnnnnntaaccttatcctctttttaattttgagtgtcccttggatgataattgagttctataattaagaagttaaatacagacacc |
200 |
Q |
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|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||| |
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| T |
33359912 |
agagagac------------taaccttatcctctttttaattttgagtgtcccttggatgataattgagttctataattaagaagttaaatacacacacc |
33359825 |
T |
|
| Q |
201 |
acaaagagaaaaaacggtccaatcc-aatggttatcggaaattaacaagagagaggattagcggccataggtga |
273 |
Q |
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|
||||||||||||||||||||||||| |||||||||| ||||||||||||||||||||||||||||||||||||| |
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| T |
33359824 |
acaaagagaaaaaacggtccaatccaaatggttatcagaaattaacaagagagaggattagcggccataggtga |
33359751 |
T |
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