View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF14613_low_16 (Length: 234)
Name: NF14613_low_16
Description: NF14613
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF14613_low_16 |
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Alignment Details
Target: chr1 (Bit Score: 152; Significance: 1e-80; HSPs: 1)
Name: chr1
Description:
Target: chr1; HSP #1
Raw Score: 152; E-Value: 1e-80
Query Start/End: Original strand, 1 - 216
Target Start/End: Original strand, 6412390 - 6412614
Alignment:
| Q |
1 |
ttgatagacaatagcgaatactgaaaggaaaactatatgaaaaagctatggggcttgaaaaatgagtgtaatctacttgacaaagacttcaacatatata |
100 |
Q |
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| T |
6412390 |
ttgatggacaatagcgaatactgaaaggaaaactatgtgaaaaagctatggggcttgaaaaatgagtgtaatctacttgacaaagacttcaac----ata |
6412485 |
T |
|
| Q |
101 |
gagaggtacaatgcacagataaatgtgtcttttgtgagt-------------aatgattgacatgtgtttctttggatgttggaaagcgcaagagacatg |
187 |
Q |
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||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||| |||| ||||||||||||||||||| |
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| T |
6412486 |
gagaggtacaatgcacagataaatgtgtcttttgtgagtatctactgatgagaatgattgacatgtgtttctttgaatgtaggaaagcgcaagagacatg |
6412585 |
T |
|
| Q |
188 |
gatggaagtgggtctttggatgatcataa |
216 |
Q |
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||||||||||||||||||||||||||||| |
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| T |
6412586 |
gatggaagtgggtctttggatgatcataa |
6412614 |
T |
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