View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF14614_high_20 (Length: 419)
Name: NF14614_high_20
Description: NF14614
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF14614_high_20 |
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Alignment Details
Target: chr8 (Bit Score: 274; Significance: 1e-153; HSPs: 1)
Name: chr8
Description:
Target: chr8; HSP #1
Raw Score: 274; E-Value: 1e-153
Query Start/End: Original strand, 20 - 355
Target Start/End: Complemental strand, 32955949 - 32955629
Alignment:
| Q |
20 |
aacaacaacaacaattcatggtactcacaaccacagagtcaaatgtatggcaatgagctacgtttcatggatgattcagatgcagaatcagaaaatggca |
119 |
Q |
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| T |
32955949 |
aacaacaacaacaattcatggtactcacaaccacagagtcaaatgtatggcaatgagctacgtttcatggatgattcagatgcagaatcagaaaatggca |
32955850 |
T |
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| Q |
120 |
ttcctaatttcctttcttggagactcaacacaagtcttgttcacgattacacaagatgaagcattggaattagaagttacgatgatattgatgatgatga |
219 |
Q |
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| T |
32955849 |
ttcctaatttcctttcttggagactcaacacaagtcttgttcacgattacacaagatgaagcattggaattagaagtt---------------atgatga |
32955765 |
T |
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| Q |
220 |
cgacataagcttaatattcctaagataatagaacagaaagaagacaaaaaatgatgatgtagatgtaggtgtacgacaatgttttacgatgtagatgttt |
319 |
Q |
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||||||||||||||||||||| | ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
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| T |
32955764 |
tgacataagcttaatattcctacgttaatagaacagaaagaagacaaaaaatgatgatgtagatgtaggtgtacgacaatgttttacgatgtagatgttt |
32955665 |
T |
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| Q |
320 |
ttgattgtgatggttatgttatggtctcgtcaacgg |
355 |
Q |
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|||||||||||||||||||||||||||||||||||| |
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| T |
32955664 |
ttgattgtgatggttatgttatggtctcgtcaacgg |
32955629 |
T |
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