View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF14614_high_32 (Length: 321)
Name: NF14614_high_32
Description: NF14614
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF14614_high_32 |
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Alignment Details
Target: chr2 (Bit Score: 185; Significance: 1e-100; HSPs: 1)
Name: chr2
Description:
Target: chr2; HSP #1
Raw Score: 185; E-Value: 1e-100
Query Start/End: Original strand, 20 - 302
Target Start/End: Complemental strand, 520028 - 519767
Alignment:
| Q |
20 |
acgtgcaatgcattggtgctgtctgtgacacacacatggtaccatccatgcacatggagagtttttcattctccaaggttcttgttacaaacaacttttt |
119 |
Q |
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| T |
520028 |
acgtgcaatgcattggtgctgtctgtgacacacacatggtaccat----gcacatggagagtttttcattctccaaggttgttgttacaaacaactttta |
519933 |
T |
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| Q |
120 |
gatggtaagttgcaagggaccaaggggtcccggtccctctaagaaaaaccggtatggcattaattataattaatttttataaatatagcaaactgctaaa |
219 |
Q |
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| T |
519932 |
gatggtaagttgcaagggaccaaggggtcccggtccctctaagaaaaaccggtatggcatta------attaatttatataaatatagcaaactgctaaa |
519839 |
T |
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| Q |
220 |
aagacaacagaaggaaagggaaaaggaagttcaataataatttaatgatggaaatgttaattcctgctcaccaataaaggaca |
302 |
Q |
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| T |
519838 |
aagac-----------agggaaaaggaagttcaataataatttaacgatggaaatattaattcctgctcaccaataaaggaca |
519767 |
T |
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