View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF14614_high_64 (Length: 226)
Name: NF14614_high_64
Description: NF14614
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF14614_high_64 |
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| [»] chr5 (1 HSPs) |
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Alignment Details
Target: chr5 (Bit Score: 206; Significance: 1e-113; HSPs: 1)
Name: chr5
Description:
Target: chr5; HSP #1
Raw Score: 206; E-Value: 1e-113
Query Start/End: Original strand, 5 - 226
Target Start/End: Original strand, 30980434 - 30980655
Alignment:
| Q |
5 |
catggtctaaccgtggctctctttgggccaatgattgttctctttcattttcctcctccaataatggctcatatgttagtattcattatccaatcttcac |
104 |
Q |
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| T |
30980434 |
catggtctaaccgtggctctctttgggccaatgattgttctctttcattttcctcctccaataatggctcctatgttagtattcattatccaatcttcac |
30980533 |
T |
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| Q |
105 |
tttcatatataagttttaatatattattattctctaatgtttaatgcacatgtttgcacttctaacttagtaatttttattattttaatgccttataaca |
204 |
Q |
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||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||| ||||||||||| |
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| T |
30980534 |
tttcatatataagttttaatatattattattctctaatgtttaatgcacatgtttgcacttctaacttagtaattcttattattttaaggccttataaca |
30980633 |
T |
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| Q |
205 |
actatattattatatttgtctt |
226 |
Q |
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||||||||||||||||| |||| |
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| T |
30980634 |
actatattattatatttttctt |
30980655 |
T |
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