View Alignment

This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.

Legend
 Query
 Query hiting target  Query hiting target's complemental strand
 Query's complemental strand hiting target  Query's complemental strand hiting target's complemental strand

Alignment Overview

Query: NF14614_low_17 (Length: 460)

Name: NF14614_low_17
Description: NF14614
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)


[»] NF14614_low_17
NF14614_low_17
[»] chr4 (40 HSPs)
chr4 (1-448)||(27724909-27725355)
chr4 (1-111)||(53315357-53315467)
chr4 (3-123)||(2996592-2996712)
chr4 (39-111)||(6987708-6987780)
chr4 (2-111)||(27123282-27123391)
chr4 (1-85)||(6428075-6428159)
chr4 (39-111)||(11264332-11264404)
chr4 (5-74)||(18628486-18628555)
chr4 (35-92)||(52419581-52419638)
chr4 (3-123)||(21157787-21157907)
chr4 (53-109)||(28749888-28749944)
chr4 (55-114)||(2874607-2874666)
chr4 (3-90)||(3549486-3549573)
chr4 (7-122)||(56007699-56007814)
chr4 (5-83)||(8328052-8328130)
chr4 (39-85)||(19429479-19429525)
chr4 (1-79)||(24370880-24370958)
chr4 (2-84)||(25896842-25896924)
chr4 (1-111)||(45128239-45128349)
chr4 (3-85)||(46187840-46187922)
chr4 (2-123)||(14011253-14011374)
chr4 (39-116)||(28406938-28407015)
chr4 (39-96)||(41097223-41097280)
chr4 (4-84)||(4691906-4691986)
chr4 (45-85)||(21953005-21953045)
chr4 (1-85)||(33534098-33534182)
chr4 (4-124)||(47970314-47970434)
chr4 (4-95)||(7063539-7063630)
chr4 (3-82)||(25717653-25717732)
chr4 (3-110)||(29375935-29376042)
chr4 (1-59)||(2811554-2811612)
chr4 (4-82)||(25583652-25583730)
chr4 (1-95)||(54277252-54277346)
chr4 (4-85)||(51560221-51560302)
chr4 (153-193)||(4071832-4071872)
chr4 (1-85)||(7730657-7730740)
chr4 (53-85)||(14986958-14986990)
chr4 (4-111)||(19422429-19422536)
chr4 (46-109)||(28749763-28749829)
chr4 (1-85)||(32071925-32072004)
[»] chr6 (45 HSPs)
chr6 (1-123)||(2455829-2455951)
chr6 (4-111)||(8420129-8420236)
chr6 (3-123)||(9833042-9833161)
chr6 (4-82)||(733109-733187)
chr6 (2-111)||(2460081-2460190)
chr6 (1-85)||(32917254-32917338)
chr6 (42-85)||(9027635-9027678)
chr6 (26-105)||(27595521-27595600)
chr6 (1-78)||(30865547-30865624)
chr6 (1-85)||(31338033-31338118)
chr6 (39-111)||(32171350-32171422)
chr6 (48-111)||(725631-725694)
chr6 (39-105)||(27693406-27693472)
chr6 (13-95)||(34538159-34538241)
chr6 (39-88)||(2027765-2027814)
chr6 (56-109)||(27615257-27615310)
chr6 (4-85)||(27857415-27857496)
chr6 (4-85)||(32848528-32848609)
chr6 (43-123)||(32577957-32578037)
chr6 (161-193)||(32980491-32980523)
chr6 (6-86)||(33385585-33385665)
chr6 (43-123)||(34939532-34939612)
chr6 (60-111)||(9667973-9668024)
chr6 (4-111)||(32171498-32171605)
chr6 (4-123)||(33887849-33887968)
chr6 (1-79)||(3180998-3181076)
chr6 (41-111)||(29957891-29957961)
chr6 (161-194)||(2514651-2514684)
chr6 (39-88)||(9202957-9203006)
chr6 (37-110)||(20368145-20368218)
chr6 (153-190)||(27595647-27595684)
chr6 (44-81)||(31594356-31594393)
chr6 (45-82)||(34404600-34404637)
chr6 (1-85)||(281777-281861)
chr6 (47-95)||(740861-740909)
chr6 (43-123)||(2205562-2205641)
chr6 (39-111)||(3738100-3738172)
chr6 (51-123)||(4420662-4420734)
chr6 (1-85)||(8348283-8348367)
chr6 (45-81)||(10616514-10616550)
chr6 (66-110)||(17770448-17770492)
chr6 (14-86)||(33067214-33067286)
chr6 (39-111)||(33116615-33116687)
chr6 (39-111)||(34404414-34404486)
chr6 (41-109)||(34939777-34939845)
[»] chr2 (48 HSPs)
chr2 (2-75)||(3973609-3973682)
chr2 (1-85)||(28803459-28803543)
chr2 (1-117)||(43985234-43985350)
chr2 (26-126)||(1741986-1742086)
chr2 (2-108)||(43456637-43456743)
chr2 (3-88)||(4350744-4350829)
chr2 (39-123)||(25661126-25661210)
chr2 (39-123)||(34652003-34652087)
chr2 (59-123)||(36852491-36852555)
chr2 (41-96)||(11344739-11344794)
chr2 (1-76)||(22878164-22878239)
chr2 (40-93)||(4550796-4550849)
chr2 (53-110)||(10285892-10285949)
chr2 (1-110)||(18884899-18885008)
chr2 (41-93)||(1494415-1494467)
chr2 (5-85)||(30552576-30552656)
chr2 (1-95)||(9478346-9478440)
chr2 (1-95)||(32821856-32821950)
chr2 (37-79)||(43808621-43808663)
chr2 (32-85)||(12785920-12785973)
chr2 (4-93)||(17221472-17221561)
chr2 (6-82)||(1318296-1318371)
chr2 (4-95)||(787379-787470)
chr2 (2-85)||(5759505-5759587)
chr2 (4-83)||(29430817-29430896)
chr2 (8-63)||(34927042-34927097)
chr2 (2-64)||(6988197-6988259)
chr2 (51-85)||(9878661-9878695)
chr2 (53-95)||(12215854-12215896)
chr2 (2-52)||(17775396-17775446)
chr2 (2-123)||(43141890-43142012)
chr2 (1-95)||(43529787-43529881)
chr2 (43-84)||(1830103-1830144)
chr2 (66-111)||(1939326-1939371)
chr2 (1-86)||(9996794-9996879)
chr2 (26-63)||(10190345-10190382)
chr2 (5-78)||(13866942-13867015)
chr2 (42-79)||(15120246-15120283)
chr2 (153-194)||(25609745-25609786)
chr2 (3-76)||(25609862-25609935)
chr2 (7-91)||(35223242-35223327)
chr2 (50-95)||(43065428-43065473)
chr2 (46-111)||(43205340-43205405)
chr2 (51-123)||(9595277-9595349)
chr2 (3-95)||(33192249-33192340)
chr2 (41-120)||(33231921-33231998)
chr2 (41-85)||(39962268-39962312)
chr2 (4-60)||(45425293-45425349)
[»] chr5 (42 HSPs)
chr5 (1-117)||(11297125-11297241)
chr5 (1-109)||(29590559-29590666)
chr5 (1-85)||(14980566-14980650)
chr5 (4-95)||(32172700-32172791)
chr5 (4-123)||(37611147-37611266)
chr5 (4-123)||(37787877-37787996)
chr5 (1-122)||(11457119-11457239)
chr5 (40-85)||(38047847-38047892)
chr5 (3-123)||(36639541-36639661)
chr5 (43-111)||(41052899-41052967)
chr5 (2-85)||(35960470-35960552)
chr5 (1-79)||(499660-499738)
chr5 (5-111)||(35095720-35095825)
chr5 (4-85)||(11095427-11095508)
chr5 (3-88)||(25720348-25720433)
chr5 (1-85)||(16016355-16016439)
chr5 (41-85)||(16944944-16944988)
chr5 (3-95)||(34117479-34117570)
chr5 (3-87)||(39257325-39257409)
chr5 (26-85)||(10152391-10152450)
chr5 (50-109)||(11700356-11700415)
chr5 (1-84)||(12459930-12460013)
chr5 (50-85)||(40499704-40499739)
chr5 (2-72)||(12407660-12407730)
chr5 (48-122)||(13604825-13604899)
chr5 (41-95)||(28586735-28586789)
chr5 (3-85)||(40534256-40534338)
chr5 (3-85)||(42646948-42647029)
chr5 (4-65)||(7550450-7550511)
chr5 (45-78)||(12242683-12242716)
chr5 (6-95)||(29336677-29336766)
chr5 (1-66)||(37968953-37969018)
chr5 (45-85)||(2569668-2569708)
chr5 (3-75)||(5377128-5377200)
chr5 (3-79)||(10125649-10125725)
chr5 (9-85)||(13781812-13781888)
chr5 (45-85)||(14364279-14364319)
chr5 (3-123)||(17258814-17258934)
chr5 (1-85)||(34205298-34205382)
chr5 (161-193)||(35960364-35960396)
chr5 (39-111)||(37526166-37526238)
chr5 (39-111)||(37690603-37690675)
[»] chr8 (48 HSPs)
chr8 (41-123)||(31875564-31875646)
chr8 (1-107)||(12361227-12361335)
chr8 (42-93)||(30987961-30988012)
chr8 (3-95)||(43709309-43709403)
chr8 (42-111)||(8558691-8558760)
chr8 (3-79)||(30191072-30191148)
chr8 (41-95)||(4055585-4055639)
chr8 (1-111)||(4560533-4560643)
chr8 (6-83)||(21130671-21130748)
chr8 (39-95)||(14949913-14949969)
chr8 (6-64)||(24326109-24326167)
chr8 (37-111)||(27645935-27646009)
chr8 (1-85)||(5069754-5069836)
chr8 (42-95)||(6509273-6509326)
chr8 (2-95)||(9700048-9700141)
chr8 (38-79)||(37461205-37461246)
chr8 (1-82)||(39551138-39551219)
chr8 (1-81)||(7008660-7008739)
chr8 (39-123)||(7918413-7918497)
chr8 (1-57)||(11059658-11059714)
chr8 (1-85)||(40071806-40071890)
chr8 (1-52)||(3634613-3634664)
chr8 (10-85)||(11569395-11569470)
chr8 (1-96)||(43368629-43368724)
chr8 (1-111)||(6950353-6950463)
chr8 (43-85)||(9540967-9541009)
chr8 (39-85)||(9572927-9572973)
chr8 (4-74)||(18931230-18931300)
chr8 (50-108)||(37740405-37740462)
chr8 (161-194)||(1470944-1470977)
chr8 (153-194)||(4558747-4558788)
chr8 (3-111)||(11183576-11183682)
chr8 (7-76)||(25881350-25881419)
chr8 (49-94)||(29168642-29168687)
chr8 (56-105)||(29262858-29262907)
chr8 (1-109)||(4511061-4511169)
chr8 (1-85)||(4763951-4764035)
chr8 (3-79)||(11376766-11376842)
chr8 (3-91)||(11415205-11415293)
chr8 (1-57)||(14926911-14926967)
chr8 (57-85)||(25869251-25869279)
chr8 (14-82)||(26410340-26410408)
chr8 (1-85)||(26479842-26479926)
chr8 (43-79)||(30600320-30600356)
chr8 (39-79)||(32156971-32157011)
chr8 (3-123)||(33553259-33553379)
chr8 (3-110)||(34849135-34849243)
chr8 (3-79)||(44865497-44865573)
[»] chr7 (45 HSPs)
chr7 (1-123)||(27626052-27626174)
chr7 (1-110)||(48157049-48157158)
chr7 (3-95)||(36598287-36598379)
chr7 (1-95)||(1418468-1418560)
chr7 (1-80)||(39542229-39542308)
chr7 (3-85)||(33894684-33894766)
chr7 (39-117)||(44808183-44808261)
chr7 (4-88)||(8427067-8427151)
chr7 (1-85)||(23214912-23214996)
chr7 (4-83)||(30748966-30749045)
chr7 (7-106)||(45078314-45078413)
chr7 (50-92)||(5269536-5269578)
chr7 (1-111)||(12234818-12234928)
chr7 (13-111)||(22387837-22387935)
chr7 (1-79)||(25670515-25670593)
chr7 (2-95)||(30751566-30751659)
chr7 (2-85)||(24048599-24048680)
chr7 (1-77)||(31341200-31341276)
chr7 (51-123)||(36370688-36370760)
chr7 (1-85)||(39551477-39551561)
chr7 (44-92)||(47427275-47427323)
chr7 (45-108)||(3500940-3501003)
chr7 (8-111)||(28165122-28165225)
chr7 (55-114)||(29290361-29290420)
chr7 (1-76)||(34754739-34754814)
chr7 (51-86)||(44989908-44989943)
chr7 (3-77)||(3836614-3836688)
chr7 (5-111)||(27121527-27121632)
chr7 (43-85)||(36537965-36538007)
chr7 (39-85)||(39360080-39360126)
chr7 (152-194)||(49060489-49060531)
chr7 (61-122)||(2013214-2013275)
chr7 (4-81)||(2727290-2727367)
chr7 (26-95)||(12834916-12834985)
chr7 (3-88)||(20547321-20547406)
chr7 (39-88)||(25422380-25422429)
chr7 (2-79)||(28727693-28727770)
chr7 (48-85)||(33645937-33645974)
chr7 (56-85)||(39568308-39568337)
chr7 (1-123)||(44151405-44151531)
chr7 (51-96)||(44686976-44687021)
chr7 (3-79)||(8094369-8094445)
chr7 (4-60)||(25014031-25014087)
chr7 (45-77)||(31149705-31149737)
chr7 (45-77)||(31167997-31168029)
[»] chr3 (46 HSPs)
chr3 (39-123)||(37273153-37273237)
chr3 (2-88)||(21872225-21872311)
chr3 (1-93)||(25182919-25183008)
chr3 (14-111)||(20192548-20192645)
chr3 (3-64)||(22667481-22667542)
chr3 (3-64)||(22724120-22724181)
chr3 (45-126)||(49465909-49465990)
chr3 (1-106)||(52323823-52323928)
chr3 (3-95)||(24624257-24624349)
chr3 (5-123)||(33965421-33965540)
chr3 (6-64)||(11041160-11041218)
chr3 (2-72)||(50211805-50211875)
chr3 (4-85)||(41724269-41724350)
chr3 (1-80)||(11039707-11039786)
chr3 (1-95)||(36646311-36646405)
chr3 (1-78)||(40880877-40880954)
chr3 (39-83)||(1810036-1810080)
chr3 (3-71)||(24158447-24158515)
chr3 (1-85)||(24281104-24281188)
chr3 (4-76)||(27792938-27793010)
chr3 (1-85)||(36200153-36200237)
chr3 (5-85)||(37155058-37155138)
chr3 (5-85)||(37200413-37200493)
chr3 (8-79)||(50004715-50004787)
chr3 (40-79)||(2606278-2606317)
chr3 (4-79)||(10540425-10540500)
chr3 (42-85)||(14598523-14598566)
chr3 (42-85)||(42817192-42817235)
chr3 (39-85)||(11039306-11039352)
chr3 (39-85)||(21574547-21574593)
chr3 (1-111)||(26603224-26603334)
chr3 (43-85)||(31403075-31403117)
chr3 (39-85)||(49772635-49772681)
chr3 (153-194)||(1395620-1395661)
chr3 (3-60)||(25699129-25699186)
chr3 (14-111)||(43115087-43115184)
chr3 (13-82)||(53735913-53735982)
chr3 (1-81)||(1395700-1395780)
chr3 (1-85)||(2923535-2923619)
chr3 (1-85)||(11040543-11040627)
chr3 (4-60)||(20210860-20210916)
chr3 (2-78)||(24625272-24625348)
chr3 (1-109)||(26542570-26542677)
chr3 (3-59)||(27795944-27796000)
chr3 (39-95)||(29113509-29113565)
chr3 (43-95)||(31010449-31010501)
[»] chr1 (53 HSPs)
chr1 (3-93)||(1662622-1662712)
chr1 (1-111)||(30259415-30259525)
chr1 (1-110)||(5591896-5592004)
chr1 (1-82)||(23373242-23373323)
chr1 (3-95)||(15581301-15581393)
chr1 (3-86)||(4549472-4549555)
chr1 (40-83)||(38867799-38867842)
chr1 (11-85)||(44422756-44422830)
chr1 (45-94)||(11560535-11560584)
chr1 (1-109)||(3597210-3597318)
chr1 (5-85)||(32515374-32515454)
chr1 (1-84)||(4033946-4034029)
chr1 (38-85)||(15579539-15579586)
chr1 (1-60)||(27807197-27807256)
chr1 (3-126)||(31517671-31517794)
chr1 (1-123)||(12564428-12564550)
chr1 (1-79)||(28467496-28467574)
chr1 (3-85)||(43420315-43420397)
chr1 (4-93)||(14737658-14737747)
chr1 (49-90)||(17631079-17631120)
chr1 (39-84)||(23407489-23407534)
chr1 (4-77)||(26679419-26679492)
chr1 (1-114)||(29723517-29723630)
chr1 (17-122)||(44031944-44032049)
chr1 (2-95)||(45327627-45327720)
chr1 (39-84)||(49692019-49692064)
chr1 (1-85)||(10199337-10199421)
chr1 (2-95)||(17628646-17628735)
chr1 (1-85)||(27140535-27140619)
chr1 (1-77)||(51929391-51929467)
chr1 (4-111)||(4868431-4868537)
chr1 (1-64)||(6279477-6279540)
chr1 (48-111)||(15515572-15515635)
chr1 (1-88)||(16980857-16980944)
chr1 (1-84)||(34536216-34536299)
chr1 (42-85)||(37941955-37941998)
chr1 (153-192)||(45234148-45234187)
chr1 (43-86)||(49521776-49521819)
chr1 (1-123)||(37593613-37593735)
chr1 (41-107)||(37811887-37811953)
chr1 (1-74)||(5157140-5157213)
chr1 (50-95)||(27145589-27145634)
chr1 (153-194)||(50319241-50319282)
chr1 (51-111)||(6262051-6262111)
chr1 (45-85)||(6262795-6262835)
chr1 (1-33)||(6292601-6292633)
chr1 (3-79)||(15709912-15709988)
chr1 (51-107)||(17420238-17420294)
chr1 (49-85)||(19412574-19412610)
chr1 (51-95)||(27145968-27146012)
chr1 (1-85)||(28075761-28075845)
chr1 (46-94)||(43771885-43771933)
chr1 (1-84)||(48282182-48282263)
[»] scaffold0024 (1 HSPs)
scaffold0024 (7-78)||(27640-27711)
[»] scaffold0110 (1 HSPs)
scaffold0110 (3-73)||(4154-4224)
[»] scaffold0311 (1 HSPs)
scaffold0311 (14-119)||(10559-10664)
[»] scaffold0012 (1 HSPs)
scaffold0012 (56-85)||(38649-38678)


Alignment Details
Target: chr4 (Bit Score: 351; Significance: 0; HSPs: 40)
Name: chr4
Description:

Target: chr4; HSP #1
Raw Score: 351; E-Value: 0
Query Start/End: Original strand, 1 - 448
Target Start/End: Complemental strand, 27725355 - 27724909
Alignment:
Q  1 gacttatttgagcttatctactgagataagcacatataagactgtttgagagagcttatggaaataacttatgacatgtccataaactattttcaaatga 100  Q
    |||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  27725355 gacttatttgagcttatctactgagataagcacatatacgactgtttgagagagcttatggaaataacttatgacatgtccataaactattttcaaatga 27725256  T
Q  101 tttccataagcacttcaagatagattgtnnnnnnnncttatcgcttttaccaaaaataacttgactttattttatgttttattatagaaatagcaaacac 200  Q
    ||||||||||||||||||||||||||||        |||||| |||||||| ||||||||||||||| ||||||||||||||||||||||||||||||||    
T  27725255 tttccataagcacttcaagatagattgtaaaaaaaacttatcacttttaccgaaaataacttgactt-attttatgttttattatagaaatagcaaacac 27725157  T
Q  201 ttatagtactataagtgcttaatcaagccgttaatccaaacatgatcaaagttagtttgctagcaaagaaacgagagcgctacctgctcaacaatcttct 300  Q
    ||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||| |||||||||||||||||||||    
T  27725156 ttatagtactataagtgcttaatcaagccgttaatccaaacatgaccaaagttagtttgctagcaaagaaacgagagctctacctgctcaacaatcttct 27725057  T
Q  301 tggaggaaggtgcattacattttcccatagtaaagcttccacagaaacccgaaggatcaccaaagcttgcaaattcaacagccgtaannnnnnnctggtc 400  Q
    ||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||| |||||||||||||       ||||||    
T  27725056 tggaggaaggtgcattacattttcccataataaagcttccacagaaacccgaaggatcaccaaagcttgcaaactcaacagccgtaatttttttctggtc 27724957  T
Q  401 tggacatgtgataaaagcttctggagtcagattctctcccacaggttc 448  Q
     ||||| ||||||||||||||||||||||||||||| |||||| ||||    
T  27724956 cggacacgtgataaaagcttctggagtcagattctcccccacacgttc 27724909  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #2
Raw Score: 55; E-Value: 2e-22
Query Start/End: Original strand, 1 - 111
Target Start/End: Complemental strand, 53315467 - 53315357
Alignment:
Q  1 gacttatttgagcttatctactgagataagcacatataagactgtttgagagagcttatggaaataacttatgacatgtccataaactattttcaaatga 100  Q
    |||||||||||||||||| ||||  |||||||||||||||||| |||| ||||||||||| ||| ||| ||| |||||||||||| ||||||| || | |    
T  53315467 gacttatttgagcttatccactggtataagcacatataagactatttgtgagagcttatgaaaacaacatatcacatgtccataagctatttttaactta 53315368  T
Q  101 tttccataagc 111  Q
    ||| |||||||    
T  53315367 ttttcataagc 53315357  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #3
Raw Score: 53; E-Value: 3e-21
Query Start/End: Original strand, 3 - 123
Target Start/End: Complemental strand, 2996712 - 2996592
Alignment:
Q  3 cttatttgagcttatctactgagataagcacatataagactgtttgagagagcttatggaaataacttatgacatgtccataaactattttcaaatgatt 102  Q
    ||||||||| ||||| || ||| |||||||| | | |||||||||||||||||||||| ||| |||||||||||||||||||| || ||||||| | |||    
T  2996712 cttatttgaacttatttattgacataagcacttttgagactgtttgagagagcttatgaaaacaacttatgacatgtccataagcttttttcaacttatt 2996613  T
Q  103 tccataagcacttcaagatag 123  Q
    | |||| || || ||||||||    
T  2996612 ttcatacgctctccaagatag 2996592  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #4
Raw Score: 53; E-Value: 3e-21
Query Start/End: Original strand, 39 - 111
Target Start/End: Original strand, 6987708 - 6987780
Alignment:
Q  39 agactgtttgagagagcttatggaaataacttatgacatgtccataaactattttcaaatgatttccataagc 111  Q
    |||||||||| ||||||||||||| | ||||||||||||||||||||||||||||||| | ||||||||||||    
T  6987708 agactgtttgggagagcttatggatacaacttatgacatgtccataaactattttcaacttatttccataagc 6987780  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #5
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 2 - 111
Target Start/End: Original strand, 27123282 - 27123391
Alignment:
Q  2 acttatttgagcttatctactgagataagcacatataagactgtttgagagagcttatggaaataacttatgacatgtccataaactattttcaaatgat 101  Q
    ||||||||||||||||  |||   ||||| || | | |||||||||||||||||||||||||| |||||||||||||||  |||  | ||||||| | ||    
T  27123282 acttatttgagcttataaactagcataagtacttgtgagactgtttgagagagcttatggaaacaacttatgacatgtctttaagttgttttcaacttat 27123381  T
Q  102 ttccataagc 111  Q
    ||||||||||    
T  27123382 ttccataagc 27123391  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #6
Raw Score: 41; E-Value: 0.00000000000004
Query Start/End: Original strand, 1 - 85
Target Start/End: Complemental strand, 6428159 - 6428075
Alignment:
Q  1 gacttatttgagcttatctactgagataagcacatataagactgtttgagagagcttatggaaataacttatgacatgtccataa 85  Q
    ||||||||||||||||| || ||  |||||||| | | |||| ||||||||||| ||||| ||| ||||||||||||||||||||    
T  6428159 gacttatttgagcttatatattggtataagcacttgtgagacagtttgagagagattatgaaaacaacttatgacatgtccataa 6428075  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #7
Raw Score: 41; E-Value: 0.00000000000004
Query Start/End: Original strand, 39 - 111
Target Start/End: Complemental strand, 11264404 - 11264332
Alignment:
Q  39 agactgtttgagagagcttatggaaataacttatgacatgtccataaactattttcaaatgatttccataagc 111  Q
    |||||||||| |||||| ||| |||  ||||||||||||||||||||||| ||||||| | ||||||||||||    
T  11264404 agactgtttgggagagcatatagaatcaacttatgacatgtccataaactgttttcaacttatttccataagc 11264332  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #8
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 5 - 74
Target Start/End: Original strand, 18628486 - 18628555
Alignment:
Q  5 tatttgagcttatctactgagataagcacatataagactgtttgagagagcttatggaaataacttatga 74  Q
    |||||||||||||||||||| |||| ||| | | |||||||||| ||||||||||| ||| |||||||||    
T  18628486 tatttgagcttatctactgacataaacacttgtgagactgtttgggagagcttatgaaaacaacttatga 18628555  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #9
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 35 - 92
Target Start/End: Original strand, 52419581 - 52419638
Alignment:
Q  35 tataagactgtttgagagagcttatggaaataacttatgacatgtccataaactattt 92  Q
    ||||||||||||||||||| |||||| ||| ||||||| |||||| ||||||||||||    
T  52419581 tataagactgtttgagagaccttatgaaaacaacttattacatgttcataaactattt 52419638  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #10
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 3 - 123
Target Start/End: Complemental strand, 21157907 - 21157787
Alignment:
Q  3 cttatttgagcttatctactgagataagcacatataagactgtttgagagagcttatggaaataacttatgacatgtccataaactattttcaaatgatt 102  Q
    |||||||||||| ||||||||| |||||||| | ||||||||||||  ||||||||  |||| | |||||||||| | || || || |||| |  | |||    
T  21157907 cttatttgagctcatctactgacataagcacttgtaagactgtttggaagagcttacagaaacagcttatgacatttacaaaagctgtttttagcttatt 21157808  T
Q  103 tccataagcacttcaagatag 123  Q
    ||||||||| ||||| |||||    
T  21157807 tccataagctcttcaggatag 21157787  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #11
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 53 - 109
Target Start/End: Original strand, 28749888 - 28749944
Alignment:
Q  53 agcttatggaaataacttatgacatgtccataaactattttcaaatgatttccataa 109  Q
    |||||||||||||||||||| ||||||||||||||| ||||||| | |||| |||||    
T  28749888 agcttatggaaataacttattacatgtccataaactgttttcaactcattttcataa 28749944  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #12
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 55 - 114
Target Start/End: Original strand, 2874607 - 2874666
Alignment:
Q  55 cttatggaaataacttatgacatgtccataaactattttcaaatgatttccataagcact 114  Q
    |||||||||| |||||||||||||||||||| ||||||||   | |||||||||||||||    
T  2874607 cttatggaaacaacttatgacatgtccataatctattttccgcttatttccataagcact 2874666  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #13
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 3 - 90
Target Start/End: Original strand, 3549486 - 3549573
Alignment:
Q  3 cttatttgagcttatctactgagataagcacatataagactgtttgagagagcttatggaaataacttatgacatgtccataaactat 90  Q
    ||||||| || ||||||| ||  |||||||| ||| ||||||||||||||| |||||| |||||   ||||||||||||| |||||||    
T  3549486 cttattttagtttatctattggcataagcacttatgagactgtttgagagaacttatgaaaatagtgtatgacatgtccacaaactat 3549573  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #14
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 7 - 122
Target Start/End: Complemental strand, 56007814 - 56007699
Alignment:
Q  7 tttgagcttatctactgagataagcacatataagactgtttgagagagcttatggaaataacttatgacatgtccataaactattttcaaatgatttcca 106  Q
    ||||| |||||||||||  |||| ||| | |||||||||||||||||||| ||  || |||||||||||||||| ||   ||||||| || | ||||| |    
T  56007814 tttgaacttatctactggcataatcacttgtaagactgtttgagagagctaatacaagtaacttatgacatgtcgattgtctattttgaacttatttcta 56007715  T
Q  107 taagcacttcaagata 122  Q
    ||||| || |||||||    
T  56007714 taagctctccaagata 56007699  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #15
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 5 - 83
Target Start/End: Original strand, 8328052 - 8328130
Alignment:
Q  5 tatttgagcttatctactgagataagcacatataagactgtttgagagagcttatggaaataacttatgacatgtccat 83  Q
    |||||||||||||||| ||  |||||||| ||| ||||||||||  | |||||||| ||| || |||||||||||||||    
T  8328052 tatttgagcttatctattggcataagcacttatgagactgtttggaatagcttatgaaaacaatttatgacatgtccat 8328130  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #16
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 39 - 85
Target Start/End: Original strand, 19429479 - 19429525
Alignment:
Q  39 agactgtttgagagagcttatggaaataacttatgacatgtccataa 85  Q
    |||||||||| ||||||||||||| | ||||||||||||||||||||    
T  19429479 agactgtttgggagagcttatggagaaaacttatgacatgtccataa 19429525  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #17
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 1 - 79
Target Start/End: Original strand, 24370880 - 24370958
Alignment:
Q  1 gacttatttgagcttatctactgagataagcacatataagactgtttgagagagcttatggaaataacttatgacatgt 79  Q
    |||||||||||||||||||| |   |||||||||| | ||| ||||||| | | |||||||||| ||||||||||||||    
T  24370880 gacttatttgagcttatctattcgcataagcacatgtgagaatgtttgataaaacttatggaaacaacttatgacatgt 24370958  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #18
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 2 - 84
Target Start/End: Complemental strand, 25896924 - 25896842
Alignment:
Q  2 acttatttgagcttatctactgagataagcacatataagactgtttgagagagcttatggaaataacttatgacatgtccata 84  Q
    ||||||||||| |||||||||   || ||||| | | |||||||||  |||||||||| |||||| |||||||||||||||||    
T  25896924 acttatttgagtttatctactagcattagcacttgtgagactgtttaggagagcttatagaaatagcttatgacatgtccata 25896842  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #19
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 1 - 111
Target Start/End: Original strand, 45128239 - 45128349
Alignment:
Q  1 gacttatttgagcttatctactgagataagcacatataagactgtttgagagagcttatggaaataacttatgacatgtccataaactattttcaaatga 100  Q
    ||||||||||| ||||||||| |  |||| ||||| | | | |||||||||||||||||||||| |||| ||  ||||||||| | || ||||||  | |    
T  45128239 gacttatttgaacttatctaccggcataaccacatgtgatattgtttgagagagcttatggaaacaactgatatcatgtccatgagctgttttcagctta 45128338  T
Q  101 tttccataagc 111  Q
    |||||||||||    
T  45128339 tttccataagc 45128349  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #20
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 3 - 85
Target Start/End: Original strand, 46187840 - 46187922
Alignment:
Q  3 cttatttgagcttatctactgagataagcacatataagactgtttgagagagcttatggaaataacttatgacatgtccataa 85  Q
    |||||||||||||||||||||  |||| ||| ||| ||||||||| |||| | ||||||||| || |||||| ||||| ||||    
T  46187840 cttatttgagcttatctactggcataaacacttatgagactgtttaagagggtttatggaaacaatttatgatatgtctataa 46187922  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #21
Raw Score: 34; E-Value: 0.0000000007
Query Start/End: Original strand, 2 - 123
Target Start/End: Complemental strand, 14011374 - 14011253
Alignment:
Q  2 acttatttgagcttatctactgagataagcacatataagactgtttgagagagcttatggaaataacttatgacatgtccataaactattttcaaatgat 101  Q
    |||| ||||| |||||||||| | |||||||||| ||| ||| |||| ||||||||||| ||| |  |||| |||||||  ||| || ||||||  | ||    
T  14011374 acttctttgaacttatctacttacataagcacatgtaaaactatttgggagagcttatgcaaagagtttatcacatgtctttaagctgttttcagcttat 14011275  T
Q  102 ttccataagcacttcaagatag 123  Q
    |||||||||| || ||||||||    
T  14011274 ttccataagctctccaagatag 14011253  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #22
Raw Score: 34; E-Value: 0.0000000007
Query Start/End: Original strand, 39 - 116
Target Start/End: Complemental strand, 28407015 - 28406938
Alignment:
Q  39 agactgtttgagagagcttatggaaataacttatgacatgtccataaactattttcaaatgatttccataagcacttc 116  Q
    |||||| ||||||||||||| ||||| |||| ||||||| | |||||||||||| ||  | |||||||||||| ||||    
T  28407015 agactggttgagagagcttacggaaacaactcatgacatattcataaactatttgcagcttatttccataagctcttc 28406938  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #23
Raw Score: 34; E-Value: 0.0000000007
Query Start/End: Original strand, 39 - 96
Target Start/End: Original strand, 41097223 - 41097280
Alignment:
Q  39 agactgtttgagagagcttatggaaataacttatgacatgtccataaactattttcaa 96  Q
    |||||||| | |||||||||| |||| |||| ||||||||||||||| ||||||||||    
T  41097223 agactgttcgggagagcttatagaaacaactaatgacatgtccataagctattttcaa 41097280  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #24
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 4 - 84
Target Start/End: Complemental strand, 4691986 - 4691906
Alignment:
Q  4 ttatttgagcttatctactgagataagcacatataagactgtttgagagagcttatggaaataacttatgacatgtccata 84  Q
    ||||||||||||||||||||  | || ||| | | ||||| ||||||| | |||||||||| ||||||||||||| |||||    
T  4691986 ttatttgagcttatctactgtcacaatcacttgtgagactatttgagaaaacttatggaaacaacttatgacatgcccata 4691906  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #25
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 45 - 85
Target Start/End: Complemental strand, 21953045 - 21953005
Alignment:
Q  45 tttgagagagcttatggaaataacttatgacatgtccataa 85  Q
    |||| ||||||||||||||| ||||||||||||||||||||    
T  21953045 tttgggagagcttatggaaagaacttatgacatgtccataa 21953005  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #26
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 1 - 85
Target Start/End: Original strand, 33534098 - 33534182
Alignment:
Q  1 gacttatttgagcttatctactgagataagcacatataagactgtttgagagagcttatggaaataacttatgacatgtccataa 85  Q
    |||||||||||||||||||| ||| ||||| || | | ||| | |||||||||||||||| ||| || || |||||| |||||||    
T  33534098 gacttatttgagcttatctagtgacataagtacttgtgagagtatttgagagagcttatgaaaacaaattgtgacatatccataa 33534182  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #27
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 4 - 124
Target Start/End: Complemental strand, 47970434 - 47970314
Alignment:
Q  4 ttatttgagcttatctactgagataagcacatataagactgtttgagagagcttatggaaataacttatgacatgtccataaactattttcaaatgattt 103  Q
    ||||||||||||||||||||| |||||||| | | | ||||||   || ||||||||||||  |||| |||||| |||||||| | ||||||  | ||||    
T  47970434 ttatttgagcttatctactgacataagcacttgtgaaactgttatggaaagcttatggaaactacttgtgacatttccataaattgttttcagcttattt 47970335  T
Q  104 ccataagcacttcaagataga 124  Q
     ||||||| || || ||||||    
T  47970334 gcataagctctccatgataga 47970314  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #28
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 4 - 95
Target Start/End: Complemental strand, 7063630 - 7063539
Alignment:
Q  4 ttatttgagcttatctactgagataagcacatataagactgtttgagagagcttatggaaataacttatgacatgtccataaactattttca 95  Q
    ||||||||||| ||||| ||| ||| | || | | ||||||||| ||||| ||||||| || || ||||||||| ||||||| |||||||||    
T  7063630 ttatttgagctcatctaatgatataggtacttgtgagactgtttaagagatcttatgggaacaatttatgacatttccataagctattttca 7063539  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #29
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 3 - 82
Target Start/End: Complemental strand, 25717732 - 25717653
Alignment:
Q  3 cttatttgagcttatctactgagataagcacatataagactgtttgagagagcttatggaaataacttatgacatgtcca 82  Q
    ||||||||||||||| ||| || |||||||| | | | | ||||||  |||||||||||||| |||||||||| ||||||    
T  25717732 cttatttgagcttatgtaccgacataagcacttgtgaaattgtttggaagagcttatggaaacaacttatgacttgtcca 25717653  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #30
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 3 - 110
Target Start/End: Complemental strand, 29376042 - 29375935
Alignment:
Q  3 cttatttgagcttatctactgagataagcacatataagactgtttgagagagcttatggaaataacttatgacatgtccataaactattttcaaatgatt 102  Q
    ||||||||| |||||||| ||| |||||||| | | |  || ||| |||||||||||||||| | ||||||||| |||||||   | ||||||| | |||    
T  29376042 cttatttgaacttatctattgacataagcacttgtgacgctatttcagagagcttatggaaacagcttatgacaggtccatattttgttttcaacttatt 29375943  T
Q  103 tccataag 110  Q
    ||||||||    
T  29375942 tccataag 29375935  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #31
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 1 - 59
Target Start/End: Complemental strand, 2811612 - 2811554
Alignment:
Q  1 gacttatttgagcttatctactgagataagcacatataagactgtttgagagagcttat 59  Q
    |||||||||||| ||||||||||  |||||||  ||| |||||||||||||||| ||||    
T  2811612 gacttatttgaggttatctactggcataagcatttatgagactgtttgagagagattat 2811554  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #32
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 4 - 82
Target Start/End: Complemental strand, 25583730 - 25583652
Alignment:
Q  4 ttatttgagcttatctactgagataagcacatataagactgtttgagagagcttatggaaataacttatgacatgtcca 82  Q
    ||||||||| |||||| |||| |||| ||  | | |||||||||| ||| ||||||| ||| |||||||||||||||||    
T  25583730 ttatttgagtttatcttctgacataaacatgtgtgagactgtttgggagcgcttatgcaaacaacttatgacatgtcca 25583652  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #33
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 1 - 95
Target Start/End: Original strand, 54277252 - 54277346
Alignment:
Q  1 gacttatttgagcttatctactgagataagcacatataagactgtttgagagagcttatggaaataacttatgacatgtccataaactattttca 95  Q
    ||||||||||| |||||||| ||| |||| ||| ||| |||||||| | |||||||||  |||| | ||||| |||||| |||||  ||||||||    
T  54277252 gacttatttgaacttatctagtgacataaacacttatgagactgttagcgagagcttacagaaacagcttatcacatgttcataagttattttca 54277346  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #34
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 4 - 85
Target Start/End: Original strand, 51560221 - 51560302
Alignment:
Q  4 ttatttgagcttatctactgagataagcacatataagactgtttgagagagcttatggaaataacttatgacatgtccataa 85  Q
    |||| |||||||||||||||  |||||||| ||| ||||| |||| |||| |||||| ||| | ||||| |||||| |||||    
T  51560221 ttatatgagcttatctactggcataagcacttatgagactctttgggagaccttatgaaaacaccttatcacatgttcataa 51560302  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #35
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 153 - 193
Target Start/End: Complemental strand, 4071872 - 4071832
Alignment:
Q  153 aaaataacttgactttattttatgttttattatagaaatag 193  Q
    ||||||| ||||||||||||||| |||| ||||||||||||    
T  4071872 aaaataatttgactttattttatcttttgttatagaaatag 4071832  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #36
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 1 - 85
Target Start/End: Complemental strand, 7730740 - 7730657
Alignment:
Q  1 gacttatttgagcttatctactgagataagcacatataagactgtttgagagagcttatggaaataacttatgacatgtccataa 85  Q
    |||||||||||||| ||||| ||| |||| |||   | ||||| |||  ||||||||| ||||| ||||||||||||||||||||    
T  7730740 gacttatttgagct-atctaatgacataaacacgcgtgagactattttggagagcttaaggaaacaacttatgacatgtccataa 7730657  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #37
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 53 - 85
Target Start/End: Original strand, 14986958 - 14986990
Alignment:
Q  53 agcttatggaaataacttatgacatgtccataa 85  Q
    |||||||| ||||||||||||||||||||||||    
T  14986958 agcttatgaaaataacttatgacatgtccataa 14986990  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #38
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 4 - 111
Target Start/End: Complemental strand, 19422536 - 19422429
Alignment:
Q  4 ttatttgagcttatctactgagataagcacatataagactg-tttgagagagcttatggaaataacttatgacatgtccataaactattttcaaatgatt 102  Q
    |||||||| |||||||||| | |||||||  | |||||||| ||||| | | ||||||| |||| |||||||||||| ||||  || ||||||| | |||    
T  19422536 ttatttgaccttatctactaacataagcatgtgtaagactggtttgaaata-cttatggtaatagcttatgacatgtgcatacgcttttttcaacttatt 19422438  T
Q  103 tccataagc 111  Q
    |||||||||    
T  19422437 tccataagc 19422429  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #39
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 46 - 109
Target Start/End: Original strand, 28749763 - 28749829
Alignment:
Q  46 ttgagagagcttatggaaataacttatgacatgtcc---ataaactattttcaaatgatttccataa 109  Q
    |||||||||||||||||||||||||||  |||||||   ||||||| ||||||| | |||| |||||    
T  28749763 ttgagagagcttatggaaataacttatttcatgtccgtaataaactgttttcaactcattttcataa 28749829  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #40
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 1 - 85
Target Start/End: Complemental strand, 32072004 - 32071925
Alignment:
Q  1 gacttatttgagcttatctactgagataagcacatataagactgtttgagagagcttatggaaataacttatgacatgtccataa 85  Q
    |||||||||||| ||||||| ||| |||||||| | | |||| |||||||     ||||||||| ||||||||||| ||||||||    
T  32072004 gacttatttgagtttatctattgacataagcacttgtgagacagtttgag-----ttatggaaacaacttatgacacgtccataa 32071925  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6 (Bit Score: 55; Significance: 2e-22; HSPs: 45)
Name: chr6
Description:

Target: chr6; HSP #1
Raw Score: 55; E-Value: 2e-22
Query Start/End: Original strand, 1 - 123
Target Start/End: Complemental strand, 2455951 - 2455829
Alignment:
Q  1 gacttatttgagcttatctactgagataagcacatataagactgtttgagagagcttatggaaataacttatgacatgtccataaactattttcaaatga 100  Q
    ||||||||||||||||||||| |  |||||||| |   ||| |||||   |||||||||||||| ||||||||||||| ||||||||||||||||| | |    
T  2455951 gacttatttgagcttatctaccggcataagcacttgcgagattgtttagaagagcttatggaaacaacttatgacatgcccataaactattttcaactta 2455852  T
Q  101 tttccataagcacttcaagatag 123  Q
    ||||||||||| || ||||||||    
T  2455851 tttccataagctctccaagatag 2455829  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #2
Raw Score: 52; E-Value: 1e-20
Query Start/End: Original strand, 4 - 111
Target Start/End: Original strand, 8420129 - 8420236
Alignment:
Q  4 ttatttgagcttatctactgagataagcacatataagactgtttgagagagcttatggaaataacttatgacatgtccataaactattttcaaatgattt 103  Q
    ||||||||||||||||| ||| |||| ||| | | |||||||| | |||||||||| |||||| ||||||||||||||| || |||||||||| | ||||    
T  8420129 ttatttgagcttatctattgacataaacacttgtgagactgttagtgagagcttatagaaatagcttatgacatgtccacaagctattttcaacttattt 8420228  T
Q  104 ccataagc 111  Q
    ||||||||    
T  8420229 ccataagc 8420236  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #3
Raw Score: 45; E-Value: 2e-16
Query Start/End: Original strand, 3 - 123
Target Start/End: Original strand, 9833042 - 9833161
Alignment:
Q  3 cttatttgagcttatctactgagataagcacatataagactgtttgagagagcttatggaaataacttatgacatgtccataaactattttcaaatgatt 102  Q
    |||||||||| ||||||| ||   |||| || ||| ||||| ||||||||| |||||||||| ||| |||| |||||||||||| ||||||||| | |||    
T  9833042 cttatttgagtttatctattggcgtaagtacttatgagactatttgagagatcttatggaaa-aacatatggcatgtccataaattattttcaacttatt 9833140  T
Q  103 tccataagcacttcaagatag 123  Q
    ||||||||| ||||| |||||    
T  9833141 tccataagctcttcatgatag 9833161  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #4
Raw Score: 43; E-Value: 0.000000000000003
Query Start/End: Original strand, 4 - 82
Target Start/End: Original strand, 733109 - 733187
Alignment:
Q  4 ttatttgagcttatctactgagataagcacatataagactgtttgagagagcttatggaaataacttatgacatgtcca 82  Q
    |||||||||||||||||||   |||||||| ||||  ||| ||||| |||||| |||||||||||||||||||||||||    
T  733109 ttatttgagcttatctactaccataagcacttatagaactctttgatagagctgatggaaataacttatgacatgtcca 733187  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #5
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 2 - 111
Target Start/End: Original strand, 2460081 - 2460190
Alignment:
Q  2 acttatttgagcttatctactgagataagcacatataagactgtttgagagagcttatggaaataacttatgacatgtccataaactattttcaaatgat 101  Q
    ||||||||||||||||  |||   ||||| || | | |||||||||||||||||||||||||| |||||||||||||||  |||  | ||||||| | ||    
T  2460081 acttatttgagcttataaactagcataagtacttgtgagactgtttgagagagcttatggaaacaacttatgacatgtctttaagttgttttcaacttat 2460180  T
Q  102 ttccataagc 111  Q
    ||||||||||    
T  2460181 ttccataagc 2460190  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #6
Raw Score: 41; E-Value: 0.00000000000004
Query Start/End: Original strand, 1 - 85
Target Start/End: Complemental strand, 32917338 - 32917254
Alignment:
Q  1 gacttatttgagcttatctactgagataagcacatataagactgtttgagagagcttatggaaataacttatgacatgtccataa 85  Q
    |||||||| ||||||| |||||   |||| ||| | | |||||||||| ||||||||||||||| ||||||||||||||||||||    
T  32917338 gacttattagagcttacctactagaataaacacttgtgagactgtttgggagagcttatggaaacaacttatgacatgtccataa 32917254  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #7
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 42 - 85
Target Start/End: Complemental strand, 9027678 - 9027635
Alignment:
Q  42 ctgtttgagagagcttatggaaataacttatgacatgtccataa 85  Q
    |||||||| |||||||||||||||||||||||||||||||||||    
T  9027678 ctgtttgaaagagcttatggaaataacttatgacatgtccataa 9027635  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #8
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 26 - 105
Target Start/End: Original strand, 27595521 - 27595600
Alignment:
Q  26 ataagcacatataagactgtttgagagagcttatggaaataacttatgacatgtccataaactattttcaaatgatttcc 105  Q
    |||||||| ||| |||||||||| ||||  ||||||||| |||||||||||||| ||||| |||||||||| | ||||||    
T  27595521 ataagcacttatgagactgtttgggagaatttatggaaacaacttatgacatgttcataagctattttcaagtaatttcc 27595600  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #9
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 1 - 78
Target Start/End: Complemental strand, 30865624 - 30865547
Alignment:
Q  1 gacttatttgagcttatctactgagataagcacatataagactgtttgagagagcttatggaaataacttatgacatg 78  Q
    |||||||||||||||||||  | | |||| ||| | | |||| |||| ||||||||||||||||||||||||||||||    
T  30865624 gacttatttgagcttatctgttaacataaacacttgttagacagtttaagagagcttatggaaataacttatgacatg 30865547  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #10
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 1 - 85
Target Start/End: Complemental strand, 31338118 - 31338033
Alignment:
Q  1 gacttatttgagcttatctactgagataagcacatataagactgttt-gagagagcttatggaaataacttatgacatgtccataa 85  Q
    ||||||||||||||||||||||   |||||||| || || ||| ||| | ||||||||||| ||| ||||||||||||||||||||    
T  31338118 gacttatttgagcttatctactagcataagcacgtacaaaactcttttgtgagagcttatgaaaacaacttatgacatgtccataa 31338033  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #11
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 39 - 111
Target Start/End: Original strand, 32171350 - 32171422
Alignment:
Q  39 agactgtttgagagagcttatggaaataacttatgacatgtccataaactattttcaaatgatttccataagc 111  Q
    |||||||||||||||||||||| ||| | ||||||||| ||||| || |||||||||  | ||||||||||||    
T  32171350 agactgtttgagagagcttatgaaaacagcttatgacaagtccagaagctattttcagcttatttccataagc 32171422  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #12
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 48 - 111
Target Start/End: Original strand, 725631 - 725694
Alignment:
Q  48 gagagagcttatggaaataacttatgacatgtccataaactattttcaaatgatttccataagc 111  Q
    ||||||||||||| ||| |||||||||||||||| || ||||||||||  | ||||||||||||    
T  725631 gagagagcttatgaaaacaacttatgacatgtccgtagactattttcagcttatttccataagc 725694  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #13
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 39 - 105
Target Start/End: Original strand, 27693406 - 27693472
Alignment:
Q  39 agactgtttgagagagcttatggaaataacttatgacatgtccataaactattttcaaatgatttcc 105  Q
    ||||| |||||||||  ||||||||| |||||||||||||| ||||| |||||||||| | ||||||    
T  27693406 agactatttgagagaatttatggaaacaacttatgacatgttcataagctattttcaagtaatttcc 27693472  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #14
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 13 - 95
Target Start/End: Original strand, 34538159 - 34538241
Alignment:
Q  13 cttatctactgagataagcacatataagactgtttgagagagcttatggaaataacttatgacatgtccataaactattttca 95  Q
    |||||||||| | |||||||| | | ||||| ||||||||| |||||  ||| | |||| |||||||||||||||||||||||    
T  34538159 cttatctactcatataagcacttgtgagactatttgagagatcttataaaaacagcttacgacatgtccataaactattttca 34538241  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #15
Raw Score: 34; E-Value: 0.0000000007
Query Start/End: Original strand, 39 - 88
Target Start/End: Original strand, 2027765 - 2027814
Alignment:
Q  39 agactgtttgagagagcttatggaaataacttatgacatgtccataaact 88  Q
    |||||||||| |||||||||| |||| ||||||||||||||| |||||||    
T  2027765 agactgtttgggagagcttatagaaacaacttatgacatgtcaataaact 2027814  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #16
Raw Score: 34; E-Value: 0.0000000007
Query Start/End: Original strand, 56 - 109
Target Start/End: Original strand, 27615257 - 27615310
Alignment:
Q  56 ttatggaaataacttatgacatgtccataaactattttcaaatgatttccataa 109  Q
    ||||||||| |||||||||||||| ||||| |||||||||| | ||||||||||    
T  27615257 ttatggaaacaacttatgacatgttcataagctattttcaagtaatttccataa 27615310  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #17
Raw Score: 34; E-Value: 0.0000000007
Query Start/End: Original strand, 4 - 85
Target Start/End: Complemental strand, 27857496 - 27857415
Alignment:
Q  4 ttatttgagcttatctactgagataagcacatataagactgtttgagagagcttatggaaataacttatgacatgtccataa 85  Q
    ||||||||| ||||||||||| |||  ||| | | | |||||||| ||||||||||| ||| |||||||||||| |||||||    
T  27857496 ttatttgagtttatctactgacatagacacttgtgaaactgtttgggagagcttatgaaaacaacttatgacatctccataa 27857415  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #18
Raw Score: 34; E-Value: 0.0000000007
Query Start/End: Original strand, 4 - 85
Target Start/End: Original strand, 32848528 - 32848609
Alignment:
Q  4 ttatttgagcttatctactgagataagcacatataagactgtttgagagagcttatggaaataacttatgacatgtccataa 85  Q
    ||||||||||||||||||||| |||||||  | | || | ||| | ||||||||||||||||| ||||||| || |||||||    
T  32848528 ttatttgagcttatctactgacataagcatttgtgagtccgttggggagagcttatggaaatagcttatgatatttccataa 32848609  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #19
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 43 - 123
Target Start/End: Original strand, 32577957 - 32578037
Alignment:
Q  43 tgtttgagagagcttatggaaataacttatgacatgtccataaactattttcaaatgatttccataagcacttcaagatag 123  Q
    |||||||||||||||||| ||| |||||||||||||||| | | || ||||||  | ||||||||| || ||||| |||||    
T  32577957 tgtttgagagagcttatgaaaacaacttatgacatgtccttgagctgttttcagcttatttccatatgctcttcaggatag 32578037  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #20
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 161 - 193
Target Start/End: Complemental strand, 32980523 - 32980491
Alignment:
Q  161 ttgactttattttatgttttattatagaaatag 193  Q
    |||||||||||||||||||||||||||||||||    
T  32980523 ttgactttattttatgttttattatagaaatag 32980491  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #21
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 6 - 86
Target Start/End: Complemental strand, 33385665 - 33385585
Alignment:
Q  6 atttgagcttatctactgagataagcacatataagactgtttgagagagcttatggaaataacttatgacatgtccataaa 86  Q
    |||||| |||||||||||| |||||||| | | | ||||||||  |||| ||||||||| | || ||||||||||||||||    
T  33385665 atttgaacttatctactgatataagcacttgtgaaactgtttggaagagtttatggaaacagctcatgacatgtccataaa 33385585  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #22
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 43 - 123
Target Start/End: Complemental strand, 34939612 - 34939532
Alignment:
Q  43 tgtttgagagagcttatggaaataacttatgacatgtccataaactattttcaaatgatttccataagcacttcaagatag 123  Q
    |||||||||||||||||||||| ||||||||||| |||| |||  | ||||||  | |||||||||| | ||||| |||||    
T  34939612 tgtttgagagagcttatggaaacaacttatgacacgtccgtaagttgttttcagcttatttccataacctcttcaggatag 34939532  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #23
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 60 - 111
Target Start/End: Original strand, 9667973 - 9668024
Alignment:
Q  60 ggaaataacttatgacatgtccataaactattttcaaatgatttccataagc 111  Q
    ||||| |||||||||||||||||||| || ||||||| | ||||||||||||    
T  9667973 ggaaacaacttatgacatgtccataagctgttttcaacttatttccataagc 9668024  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #24
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 4 - 111
Target Start/End: Complemental strand, 32171605 - 32171498
Alignment:
Q  4 ttatttgagcttatctactgagataagcacatataagactgtttgagagagcttatggaaataacttatgacatgtccataaactattttcaaatgattt 103  Q
    |||||||| ||||| |||||| |||||||  | | |||||| ||| ||||||||| ||||| ||||||||| |  ||||| |||| ||||||  | ||||    
T  32171605 ttatttgaacttatttactgacataagcatttgtgagactggttgggagagcttaaggaaacaacttatgatacctccatgaactgttttcagcttattt 32171506  T
Q  104 ccataagc 111  Q
    ||||||||    
T  32171505 ccataagc 32171498  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #25
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 4 - 123
Target Start/End: Complemental strand, 33887968 - 33887849
Alignment:
Q  4 ttatttgagcttatctactgagataagcacatataagactgtttgagagagcttatggaaataacttatgacatgtccataaactattttcaaatgattt 103  Q
    ||||||||| |||| |||||| || ||||| | | | | |||||||||||  ||||| ||||| |||||||||||| || ||  | ||||||| | ||||    
T  33887968 ttatttgagtttatttactgacattagcacttgtgacattgtttgagagaatttatgaaaatagcttatgacatgttcacaagttgttttcaacttattt 33887869  T
Q  104 ccataagcacttcaagatag 123  Q
    ||||||||| |||| |||||    
T  33887868 ccataagcatttcaggatag 33887849  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #26
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 1 - 79
Target Start/End: Original strand, 3180998 - 3181076
Alignment:
Q  1 gacttatttgagcttatctactgagataagcacatataagactgtttgagagagcttatggaaataacttatgacatgt 79  Q
    ||||||||||| ||||||||| || |||||||| | | ||||| ||||| |||||| ||| ||| ||||||||| ||||    
T  3180998 gacttatttgaacttatctacagacataagcacttgtgagactatttgaaagagctaatgtaaacaacttatgaaatgt 3181076  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #27
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 41 - 111
Target Start/End: Original strand, 29957891 - 29957961
Alignment:
Q  41 actgtttgagagagcttatggaaataacttatgacatgtccataaactattttcaaatgatttccataagc 111  Q
    ||||||||||||||||||||| ||  ||| ||||||||| ||| | |||||||||  | ||||||||||||    
T  29957891 actgtttgagagagcttatgggaaatactcatgacatgttcatgatctattttcagcttatttccataagc 29957961  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #28
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 161 - 194
Target Start/End: Complemental strand, 2514684 - 2514651
Alignment:
Q  161 ttgactttattttatgttttattatagaaatagc 194  Q
    ||||||||||||||| ||||||||||||||||||    
T  2514684 ttgactttattttatcttttattatagaaatagc 2514651  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #29
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 39 - 88
Target Start/End: Original strand, 9202957 - 9203006
Alignment:
Q  39 agactgtttgagagagcttatggaaataacttatgacatgtccataaact 88  Q
    ||||||||||||||| |||||| |||||||| ||| ||||| ||||||||    
T  9202957 agactgtttgagagaacttatgaaaataactcatggcatgttcataaact 9203006  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #30
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 37 - 110
Target Start/End: Original strand, 20368145 - 20368218
Alignment:
Q  37 taagactgtttgagagagcttatggaaataacttatgacatgtccataaactattttcaaatgatttccataag 110  Q
    ||||||| |||| |||| |||||| ||| |||||||||||||| ||||| ||| |||||| | |||| ||||||    
T  20368145 taagactatttgggagaacttatgaaaacaacttatgacatgttcataagctagtttcaacttattttcataag 20368218  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #31
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 153 - 190
Target Start/End: Original strand, 27595647 - 27595684
Alignment:
Q  153 aaaataacttgactttattttatgttttattatagaaa 190  Q
    ||||||| ||||||||||||||| ||||||||||||||    
T  27595647 aaaataatttgactttattttatcttttattatagaaa 27595684  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #32
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 44 - 81
Target Start/End: Original strand, 31594356 - 31594393
Alignment:
Q  44 gtttgagagagcttatggaaataacttatgacatgtcc 81  Q
    ||||||||||| ||||||||| ||||||||||||||||    
T  31594356 gtttgagagaggttatggaaacaacttatgacatgtcc 31594393  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #33
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 45 - 82
Target Start/End: Complemental strand, 34404637 - 34404600
Alignment:
Q  45 tttgagagagcttatggaaataacttatgacatgtcca 82  Q
    |||| ||||||||||||||| |||||||||||||||||    
T  34404637 tttgggagagcttatggaaacaacttatgacatgtcca 34404600  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #34
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 1 - 85
Target Start/End: Original strand, 281777 - 281861
Alignment:
Q  1 gacttatttgagcttatctactgagataagcacatataagactgtttgagagagcttatggaaataacttatgacatgtccataa 85  Q
    |||||| ||||| |||| || ||| ||||| || | | |||||||||| ||||||| ||||||  ||||||||||||||| ||||    
T  281777 gacttacttgagattatgtagtgacataagtacttgtgagactgtttgggagagctaatggaagcaacttatgacatgtctataa 281861  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #35
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 47 - 95
Target Start/End: Original strand, 740861 - 740909
Alignment:
Q  47 tgagagagcttatggaaataacttatgacatgtccataaactattttca 95  Q
    ||||||||||| |||||| |||||||||||||| |||||  ||||||||    
T  740861 tgagagagcttgtggaaacaacttatgacatgttcataagttattttca 740909  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #36
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 43 - 123
Target Start/End: Original strand, 2205562 - 2205641
Alignment:
Q  43 tgtttgagagagcttatggaaataacttatgacatgtccataaactattttcaaatgatttccataagcacttcaagatag 123  Q
    ||||| |||||||||||||||| || ||| |||||||  ||||||||| ||||  | |||||||||||| || ||||||||    
T  2205562 tgttttagagagcttatggaaacaa-ttaggacatgtttataaactatattcagcttatttccataagctctccaagatag 2205641  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #37
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 39 - 111
Target Start/End: Complemental strand, 3738172 - 3738100
Alignment:
Q  39 agactgtttgagagagcttatggaaataacttatgacatgtccataaactattttcaaatgatttccataagc 111  Q
    ||||||||||| ||| ||| |||||| | |||||||||||||||||| ||  |||||| | ||||| ||||||    
T  3738172 agactgtttgaaagatcttgtggaaacagcttatgacatgtccataagctgctttcaacttatttcaataagc 3738100  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #38
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 51 - 123
Target Start/End: Complemental strand, 4420734 - 4420662
Alignment:
Q  51 agagcttatggaaataacttatgacatgtccataaactattttcaaatgatttccataagcacttcaagatag 123  Q
    ||||||||| |||| || ||||||||||| ||||| || ||||||  | |||||||||||| || ||||||||    
T  4420734 agagcttatagaaacaaattatgacatgttcataagctgttttcagcttatttccataagctctccaagatag 4420662  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #39
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 1 - 85
Target Start/End: Complemental strand, 8348367 - 8348283
Alignment:
Q  1 gacttatttgagcttatctactgagataagcacatataagactgtttgagagagcttatggaaataacttatgacatgtccataa 85  Q
    ||||||||| ||||||||||| || |||| ||  | | | |||||||||||||||||| | ||| ||||||| ||||| ||||||    
T  8348367 gacttattttagcttatctaccgatataatcatttttgatactgtttgagagagcttacgaaaacaacttataacatgaccataa 8348283  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #40
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 45 - 81
Target Start/End: Original strand, 10616514 - 10616550
Alignment:
Q  45 tttgagagagcttatggaaataacttatgacatgtcc 81  Q
    |||| ||||||||||||||| ||||||||||||||||    
T  10616514 tttgggagagcttatggaaacaacttatgacatgtcc 10616550  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #41
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 66 - 110
Target Start/End: Original strand, 17770448 - 17770492
Alignment:
Q  66 aacttatgacatgtccataaactattttcaaatgatttccataag 110  Q
    |||||||||||||| |||||||||||||||| | |||| ||||||    
T  17770448 aacttatgacatgttcataaactattttcaacttattttcataag 17770492  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #42
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 14 - 86
Target Start/End: Complemental strand, 33067286 - 33067214
Alignment:
Q  14 ttatctactgagataagcacatataagactgtttgagagagcttatggaaataacttatgacatgtccataaa 86  Q
    ||||||||||| |||||||| | |||||||| ||| |||||||||||| || |  ||| || |||||||||||    
T  33067286 ttatctactgacataagcacttgtaagactgattgggagagcttatggcaacagtttaggaaatgtccataaa 33067214  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #43
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 39 - 111
Target Start/End: Complemental strand, 33116687 - 33116615
Alignment:
Q  39 agactgtttgagagagcttatggaaataacttatgacatgtccataaactattttcaaatgatttccataagc 111  Q
    |||||||||||| ||  ||||| ||| |||||||||||||| |||||||| |||| |  | ||||||||||||    
T  33116687 agactgtttgagggaatttatgaaaacaacttatgacatgtgcataaactcttttaagtttatttccataagc 33116615  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #44
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 39 - 111
Target Start/End: Complemental strand, 34404486 - 34404414
Alignment:
Q  39 agactgtttgagagagcttatggaaataacttatgacatgtccataaactattttcaaatgatttccataagc 111  Q
    ||||||||||| |||||||||||||| | ||||||   ||| ||||||||||||||   | ||||||||||||    
T  34404486 agactgtttgaaagagcttatggaaacagcttatgctctgtgcataaactattttcccttcatttccataagc 34404414  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #45
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 41 - 109
Target Start/End: Complemental strand, 34939845 - 34939777
Alignment:
Q  41 actgtttgagagagcttatggaaataacttatgacatgtccataaactattttcaaatgatttccataa 109  Q
    |||||||  ||||||||| ||||| | ||||||||||||||||||| | ||||||  | ||||||||||    
T  34939845 actgttttggagagcttacggaaacagcttatgacatgtccataaattgttttcagcttatttccataa 34939777  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2 (Bit Score: 54; Significance: 8e-22; HSPs: 48)
Name: chr2
Description:

Target: chr2; HSP #1
Raw Score: 54; E-Value: 8e-22
Query Start/End: Original strand, 2 - 75
Target Start/End: Complemental strand, 3973682 - 3973609
Alignment:
Q  2 acttatttgagcttatctactgagataagcacatataagactgtttgagagagcttatggaaataacttatgac 75  Q
    ||||||||||||||||| ||||| |||||||| ||||||||||||||||||||| |||||||| ||||||||||    
T  3973682 acttatttgagcttatccactgatataagcacttataagactgtttgagagagcatatggaaacaacttatgac 3973609  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #2
Raw Score: 53; E-Value: 3e-21
Query Start/End: Original strand, 1 - 85
Target Start/End: Original strand, 28803459 - 28803543
Alignment:
Q  1 gacttatttgagcttatctactgagataagcacatataagactgtttgagagagcttatggaaataacttatgacatgtccataa 85  Q
    ||||||||||||||||||||| |  |||||||||| | ||||||||||||||| | |||||||| ||||||||||||||||||||    
T  28803459 gacttatttgagcttatctaccggcataagcacatgtgagactgtttgagagaacatatggaaacaacttatgacatgtccataa 28803543  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #3
Raw Score: 49; E-Value: 7e-19
Query Start/End: Original strand, 1 - 117
Target Start/End: Complemental strand, 43985350 - 43985234
Alignment:
Q  1 gacttatttgagcttatctactgagataagcacatataagactgtttgagagagcttatggaaataacttatgacatgtccataaactattttcaaatga 100  Q
    ||||||||| || ||||||||||| |||| ||| | ||| |||||||||||||| |||  |||| |||||||||||||||||||| || ||||||| |      
T  43985350 gacttatttaagtttatctactgacataaacacttgtaaaactgtttgagagagattactgaaacaacttatgacatgtccataagcttttttcaacttg 43985251  T
Q  101 tttccataagcacttca 117  Q
    ||||||||||| |||||    
T  43985250 tttccataagctcttca 43985234  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #4
Raw Score: 45; E-Value: 2e-16
Query Start/End: Original strand, 26 - 126
Target Start/End: Original strand, 1741986 - 1742086
Alignment:
Q  26 ataagcacatataagactgtttgagagagcttatggaaataacttatgacatgtccataaactattttcaaatgatttccataagcacttcaagatagat 125  Q
    ||||||||  || ||||| |||| ||||||||||||||| |||||||||||||| ||||| |||| ||||| | |||||||||| | ||||| |||||||    
T  1741986 ataagcacccatgagactatttgggagagcttatggaaacaacttatgacatgtgcataagctatcttcaacttatttccataaactcttcatgatagat 1742085  T
Q  126 t 126  Q
    |    
T  1742086 t 1742086  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #5
Raw Score: 43; E-Value: 0.000000000000003
Query Start/End: Original strand, 2 - 108
Target Start/End: Original strand, 43456637 - 43456743
Alignment:
Q  2 acttatttgagcttatctactgagataagcacatataagactgtttgagagagcttatggaaataacttatgacatgtccataaactattttcaaatgat 101  Q
    |||||||||| ||||| |||| | |||| ||| | ||||||||||||| ||||||| || ||| |||| |||||||||||||||||| ||||||  | ||    
T  43456637 acttatttgaacttatttactcacataaacacttgtaagactgtttgaaagagcttgtgaaaacaactcatgacatgtccataaactgttttcagcttat 43456736  T
Q  102 ttccata 108  Q
    |||||||    
T  43456737 ttccata 43456743  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #6
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 3 - 88
Target Start/End: Complemental strand, 4350829 - 4350744
Alignment:
Q  3 cttatttgagcttatctactgagataagcacatataagactgtttgagagagcttatggaaataacttatgacatgtccataaact 88  Q
    ||||||||||||| |||||||| |||||||| ||  ||| ||||||||||| |||||| ||| | |||||||||||| ||||||||    
T  4350829 cttatttgagcttctctactgacataagcacttaagagattgtttgagagaacttatgaaaacagcttatgacatgttcataaact 4350744  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #7
Raw Score: 41; E-Value: 0.00000000000004
Query Start/End: Original strand, 39 - 123
Target Start/End: Complemental strand, 25661210 - 25661126
Alignment:
Q  39 agactgtttgagagagcttatggaaataacttatgacatgtccataaactattttcaaatgatttccataagcacttcaagatag 123  Q
    ||||||||||  |||||||| ||||||| ||||||| |||||| |||||| |||||| || |||||||||||| ||||| |||||    
T  25661210 agactgtttggcagagcttacggaaatagcttatgaaatgtccttaaactgttttcagattatttccataagctcttcaggatag 25661126  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #8
Raw Score: 41; E-Value: 0.00000000000004
Query Start/End: Original strand, 39 - 123
Target Start/End: Original strand, 34652003 - 34652087
Alignment:
Q  39 agactgtttgagagagcttatggaaataacttatgacatgtccataaactattttcaaatgatttccataagcacttcaagatag 123  Q
    |||| ||| |||| ||||||| |||| |||||||||||||||||||| || ||||||| | |||||||||||| || ||||||||    
T  34652003 agacggttggagaaagcttatagaaacaacttatgacatgtccataagctgttttcaacttatttccataagctctccaagatag 34652087  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #9
Raw Score: 41; E-Value: 0.00000000000004
Query Start/End: Original strand, 59 - 123
Target Start/End: Complemental strand, 36852555 - 36852491
Alignment:
Q  59 tggaaataacttatgacatgtccataaactattttcaaatgatttccataagcacttcaagatag 123  Q
    |||| ||||||||||||||||| |||||||||||||| || |||||||||||| || ||||||||    
T  36852555 tggatataacttatgacatgtctataaactattttcagattatttccataagctctccaagatag 36852491  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #10
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 41 - 96
Target Start/End: Original strand, 11344739 - 11344794
Alignment:
Q  41 actgtttgagagagcttatggaaataacttatgacatgtccataaactattttcaa 96  Q
    ||||||||| ||| |||||||||| ||||||||||||||||||||||| |||||||    
T  11344739 actgtttgacagaccttatggaaacaacttatgacatgtccataaactgttttcaa 11344794  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #11
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 1 - 76
Target Start/End: Complemental strand, 22878239 - 22878164
Alignment:
Q  1 gacttatttgagcttatctactgagataagcacatataagactgtttgagagagcttatggaaataacttatgaca 76  Q
    |||||||||||||||||| ||||| |||||||| | | |||||||||| |||| |||||||||| || ||||||||    
T  22878239 gacttatttgagcttatccactgacataagcacttgtgagactgtttgggagaccttatggaaacaaattatgaca 22878164  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #12
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 40 - 93
Target Start/End: Complemental strand, 4550849 - 4550796
Alignment:
Q  40 gactgtttgagagagcttatggaaataacttatgacatgtccataaactatttt 93  Q
    ||||||||| ||||||||||||||| |||||||||||||| ||||| |||||||    
T  4550849 gactgtttgggagagcttatggaaacaacttatgacatgttcataagctatttt 4550796  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #13
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 53 - 110
Target Start/End: Complemental strand, 10285949 - 10285892
Alignment:
Q  53 agcttatggaaataacttatgacatgtccataaactattttcaaatgatttccataag 110  Q
    |||||||| |||||||||||||||||||||||| || ||||||| | |||||||||||    
T  10285949 agcttatgaaaataacttatgacatgtccataagctgttttcaacttatttccataag 10285892  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #14
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 1 - 110
Target Start/End: Complemental strand, 18885008 - 18884899
Alignment:
Q  1 gacttatttgagcttatctactgagataagcacatataagactgtttgagagagcttatggaaataacttatgacatgtccataaactattttcaaatga 100  Q
    |||||||| |||| |||||| ||| ||||| || | |||| ||||||| |||||||||| |||| | |||||||||| ||||| | || |||||| || |    
T  18885008 gacttattcgagcgtatctattgacataagaacttgtaaggctgtttgggagagcttatagaaacagcttatgacatttccattagctgttttcagatta 18884909  T
Q  101 tttccataag 110  Q
    ||||||||||    
T  18884908 tttccataag 18884899  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #15
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 41 - 93
Target Start/End: Original strand, 1494415 - 1494467
Alignment:
Q  41 actgtttgagagagcttatggaaataacttatgacatgtccataaactatttt 93  Q
    |||||||||||||||||||| ||| | ||||||||||||||||||||| ||||    
T  1494415 actgtttgagagagcttatgaaaacagcttatgacatgtccataaactgtttt 1494467  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #16
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 5 - 85
Target Start/End: Original strand, 30552576 - 30552656
Alignment:
Q  5 tatttgagcttatctactgagataagcacatataagactgtttgagagagcttatggaaataacttatgacatgtccataa 85  Q
    |||||||||||||||||||  |||||||| | | | ||||||||||| || |||| |||| ||||||||||||||| ||||    
T  30552576 tatttgagcttatctactggtataagcacttttgaaactgtttgagataggttatcgaaacaacttatgacatgtcaataa 30552656  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #17
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 1 - 95
Target Start/End: Complemental strand, 9478440 - 9478346
Alignment:
Q  1 gacttatttgagcttatctactgagataagcacatataagactgtttgagagagcttatggaaataacttatgacatgtccataaactattttca 95  Q
    ||||||||||| |||||||||  | ||||| || | |  ||||||||||||||| ||||| ||| ||||||| |||||||||||| || ||||||    
T  9478440 gacttatttgaacttatctaccaacataagtacttgtgtgactgtttgagagagtttatgcaaacaacttattacatgtccataagctgttttca 9478346  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #18
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 1 - 95
Target Start/End: Complemental strand, 32821950 - 32821856
Alignment:
Q  1 gacttatttgagcttatctactgagataagcacatataagactgtttgagagagcttatggaaataacttatgacatgtccataaactattttca 95  Q
    |||||||||||||||||||||  |  ||||||  |  |||||||||||  |||| |||| |||| |||||||||||||||||||| || ||||||    
T  32821950 gacttatttgagcttatctaccaacgtaagcatttgcaagactgtttggaagagtttatagaaacaacttatgacatgtccataagctgttttca 32821856  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #19
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 37 - 79
Target Start/End: Complemental strand, 43808663 - 43808621
Alignment:
Q  37 taagactgtttgagagagcttatggaaataacttatgacatgt 79  Q
    ||||||| |||||||||||||||| ||||||||||||||||||    
T  43808663 taagactatttgagagagcttatgaaaataacttatgacatgt 43808621  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #20
Raw Score: 34; E-Value: 0.0000000007
Query Start/End: Original strand, 32 - 85
Target Start/End: Complemental strand, 12785973 - 12785920
Alignment:
Q  32 acatataagactgtttgagagagcttatggaaataacttatgacatgtccataa 85  Q
    ||||| |||||| |||||||||||||| ||||| |||||| |||||||||||||    
T  12785973 acataaaagactatttgagagagcttacggaaacaacttacgacatgtccataa 12785920  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #21
Raw Score: 34; E-Value: 0.0000000007
Query Start/End: Original strand, 4 - 93
Target Start/End: Original strand, 17221472 - 17221561
Alignment:
Q  4 ttatttgagcttatctactgagataagcacatataagactgtttgagagagcttatggaaataacttatgacatgtccataaactatttt 93  Q
    ||||||||  ||||||||||  || ||||| | | |||||||| |  |||||||||||||||| |||||||||| |||||||||| ||||    
T  17221472 ttatttgaaattatctactgtcattagcacttctgagactgttcggaagagcttatggaaatatcttatgacatatccataaactttttt 17221561  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #22
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 6 - 82
Target Start/End: Complemental strand, 1318371 - 1318296
Alignment:
Q  6 atttgagcttatctactgagataagcacatataagactgtttgagagagcttatggaaataacttatgacatgtcca 82  Q
    ||||||| ||||||||||  |||||||| | | |||||||||| ||||||||||| ||| | |||||||||||||||    
T  1318371 atttgagattatctactgc-ataagcacttgtgagactgtttgtgagagcttatgaaaacatcttatgacatgtcca 1318296  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #23
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 4 - 95
Target Start/End: Complemental strand, 787470 - 787379
Alignment:
Q  4 ttatttgagcttatctactgagataagcacatataagactgtttgagagagcttatggaaataacttatgacatgtccataaactattttca 95  Q
    ||||| |||| |||||||||  |||||||| | | | |||||||| |||| |||||| ||| | |||||||||||||||||| || ||||||    
T  787470 ttattcgagcatatctactggcataagcacttgtgacactgtttgtgagaacttatgaaaacagcttatgacatgtccataagctgttttca 787379  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #24
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 2 - 85
Target Start/End: Original strand, 5759505 - 5759587
Alignment:
Q  2 acttatttgagcttatctactgagataagcacatataagactgtttgagagagcttatggaaataacttatgacatgtccataa 85  Q
    ||||||||||| ||||||| ||  ||||| || | | |||||||||| ||||||||||||||| | |||| |||||||||||||    
T  5759505 acttatttgagtttatctattggtataagtacttgtgagactgtttgggagagcttatggaaacagctta-gacatgtccataa 5759587  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #25
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 4 - 83
Target Start/End: Complemental strand, 29430896 - 29430817
Alignment:
Q  4 ttatttgagcttatctactgagataagcacatataagactgtttgagagagcttatggaaataacttatgacatgtccat 83  Q
    ||||||||||||||||||||| |||| ||| | |  |||| ||||  ||| |||||| ||||| ||||||||||||||||    
T  29430896 ttatttgagcttatctactgacataaacacttgtgggactatttggaagaacttatgaaaatagcttatgacatgtccat 29430817  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #26
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 8 - 63
Target Start/End: Complemental strand, 34927097 - 34927042
Alignment:
Q  8 ttgagcttatctactgagataagcacatataagactgtttgagagagcttatggaa 63  Q
    |||||||||| |||||| |||||||| ||||||||||||||  ||| |||||||||    
T  34927097 ttgagcttatttactgacataagcacttataagactgtttggaagaacttatggaa 34927042  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #27
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 2 - 64
Target Start/End: Complemental strand, 6988259 - 6988197
Alignment:
Q  2 acttatttgagcttatctactgagataagcacatataagactgtttgagagagcttatggaaa 64  Q
    |||||||||| |||||||||||| |||| ||| ||  ||| ||||||||||||||||| ||||    
T  6988259 acttatttgaacttatctactgatataatcacctacgagattgtttgagagagcttatagaaa 6988197  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #28
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 51 - 85
Target Start/End: Original strand, 9878661 - 9878695
Alignment:
Q  51 agagcttatggaaataacttatgacatgtccataa 85  Q
    |||||||||||||| ||||||||||||||||||||    
T  9878661 agagcttatggaaacaacttatgacatgtccataa 9878695  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #29
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 53 - 95
Target Start/End: Complemental strand, 12215896 - 12215854
Alignment:
Q  53 agcttatggaaataacttatgacatgtccataaactattttca 95  Q
    |||||||||||||| |||||||||||||||||| || ||||||    
T  12215896 agcttatggaaatagcttatgacatgtccataagctgttttca 12215854  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #30
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 2 - 52
Target Start/End: Original strand, 17775396 - 17775446
Alignment:
Q  2 acttatttgagcttatctactgagataagcacatataagactgtttgagag 52  Q
    |||||||||||| |||||||||| |||||| | | ||||||||||||||||    
T  17775396 acttatttgagcatatctactgacataagctcttttaagactgtttgagag 17775446  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #31
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 2 - 123
Target Start/End: Complemental strand, 43142012 - 43141890
Alignment:
Q  2 acttatttgagcttatctactgagataagcacatataagactgtttgagagagcttat-ggaaataacttatgacatgtccataaactattttcaaatga 100  Q
    ||||||||||||||||||||| | |||||||  | | | || |||||| || |||||| ||||| ||||||||||||| ||||||  | ||||||  | |    
T  43142012 acttatttgagcttatctactaacataagcaattgtgaaacagtttgacagcgcttatgggaaacaacttatgacatgcccataagttgttttcatttta 43141913  T
Q  101 tttccataagcacttcaagatag 123  Q
    ||||||||| | ||||| |||||    
T  43141912 tttccataaactcttcaggatag 43141890  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #32
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 1 - 95
Target Start/End: Original strand, 43529787 - 43529881
Alignment:
Q  1 gacttatttgagcttatctactgagataagcacatataagactgtttgagagagcttatggaaataacttatgacatgtccataaactattttca 95  Q
    |||||||||||||||||||| ||  |||||||| | | | |||||||| ||||  ||||| ||| | |||||| ||||| ||||| |||||||||    
T  43529787 gacttatttgagcttatctattggtataagcacttctgacactgtttgggagaatttatgaaaacagcttatgccatgttcataagctattttca 43529881  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #33
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 43 - 84
Target Start/End: Complemental strand, 1830144 - 1830103
Alignment:
Q  43 tgtttgagagagcttatggaaataacttatgacatgtccata 84  Q
    |||||| ||||||||||||||| | |||||||||||||||||    
T  1830144 tgtttgggagagcttatggaaacatcttatgacatgtccata 1830103  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #34
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 66 - 111
Target Start/End: Original strand, 1939326 - 1939371
Alignment:
Q  66 aacttatgacatgtccataaactattttcaaatgatttccataagc 111  Q
    |||||||||||||||||||| || ||||||| | ||||||||||||    
T  1939326 aacttatgacatgtccataagctgttttcaacttatttccataagc 1939371  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #35
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 1 - 86
Target Start/End: Complemental strand, 9996879 - 9996794
Alignment:
Q  1 gacttatttgagcttatctactgagataagcacatataagactgtttgagagagcttatggaaataacttatgacatgtccataaa 86  Q
    |||||||||||||||||| |||   ||||| || | | |||||| ||| |||||||||| |||| ||||||||||||  |||||||    
T  9996879 gacttatttgagcttatcaactagcataagtacttgtgagactgcttgggagagcttatagaaacaacttatgacatacccataaa 9996794  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #36
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 26 - 63
Target Start/End: Complemental strand, 10190382 - 10190345
Alignment:
Q  26 ataagcacatataagactgtttgagagagcttatggaa 63  Q
    |||| ||| |||||||||||||||||||||||||||||    
T  10190382 ataaacacttataagactgtttgagagagcttatggaa 10190345  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #37
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 5 - 78
Target Start/End: Complemental strand, 13867015 - 13866942
Alignment:
Q  5 tatttgagcttatctactgagataagcacatataagactgtttgagagagcttatggaaataacttatgacatg 78  Q
    |||||||||||||||||||  |||| ||| | | ||||||||||||||| |||| | ||| ||| |||||||||    
T  13867015 tatttgagcttatctactgccataaacacttgtgagactgtttgagagaacttaagaaaacaacctatgacatg 13866942  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #38
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 42 - 79
Target Start/End: Complemental strand, 15120283 - 15120246
Alignment:
Q  42 ctgtttgagagagcttatggaaataacttatgacatgt 79  Q
    ||||||| ||||||||||||||| ||||||||||||||    
T  15120283 ctgtttgggagagcttatggaaacaacttatgacatgt 15120246  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #39
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 153 - 194
Target Start/End: Complemental strand, 25609786 - 25609745
Alignment:
Q  153 aaaataacttgactttattttatgttttattatagaaatagc 194  Q
    ||||||| ||||||||||||||| |||| |||||||||||||    
T  25609786 aaaataaattgactttattttatcttttcttatagaaatagc 25609745  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #40
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 3 - 76
Target Start/End: Complemental strand, 25609935 - 25609862
Alignment:
Q  3 cttatttgagcttatctactgagataagcacatataagactgtttgagagagcttatggaaataacttatgaca 76  Q
    |||||||||||||||||||| | ||||| || | | |||||| |||  | |||||||||||| |||||||||||    
T  25609935 cttatttgagcttatctactaacataagaacttgtgagactgcttggaatagcttatggaaacaacttatgaca 25609862  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #41
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 7 - 91
Target Start/End: Original strand, 35223242 - 35223327
Alignment:
Q  7 tttgagcttatctact-gagataagcacatataagactgtttgagagagcttatggaaataacttatgacatgtccataaactatt 91  Q
    |||||||||||||||| |  |||||||| |||||| | |||||| ||| |||||||||| |||| |||| |||| ||||| |||||    
T  35223242 tttgagcttatctactagcaataagcacttataaggccgtttgaaagatcttatggaaacaactaatgatatgttcataagctatt 35223327  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #42
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 50 - 95
Target Start/End: Original strand, 43065428 - 43065473
Alignment:
Q  50 gagagcttatggaaataacttatgacatgtccataaactattttca 95  Q
    ||||||||||| ||| ||||||||||||||||||||| | ||||||    
T  43065428 gagagcttatgaaaacaacttatgacatgtccataaattgttttca 43065473  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #43
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 46 - 111
Target Start/End: Complemental strand, 43205405 - 43205340
Alignment:
Q  46 ttgagagagcttatggaaataacttatgacatgtccataaactattttcaaatgatttccataagc 111  Q
    ||||||| ||||||||||| ||| ||| ||||||||  ||||| ||||||| | ||||||||||||    
T  43205405 ttgagagtgcttatggaaacaacatataacatgtccgcaaactgttttcaacttatttccataagc 43205340  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #44
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 51 - 123
Target Start/End: Complemental strand, 9595349 - 9595277
Alignment:
Q  51 agagcttatggaaataacttatgacatgtccataaactattttcaaatgatttccataagcacttcaagatag 123  Q
    |||| ||||| ||| | |||||||||||||||| |||||||||||  | |||| |||||||| || |||||||    
T  9595349 agagtttatgaaaacatcttatgacatgtccatgaactattttcagcttattttcataagcattttaagatag 9595277  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #45
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 3 - 95
Target Start/End: Complemental strand, 33192340 - 33192249
Alignment:
Q  3 cttatttgagcttatctactgagataagcacatataagactgtttgagagagcttatggaaataacttatgacatgtccataaactattttca 95  Q
    ||||||||||||||||| |||| |||| |||  || ||||||||||| ||| |||||| ||| |  ||||||||| ||||||| || ||||||    
T  33192340 cttatttgagcttatctgctgacataaacactcatgagactgtttga-agaacttatgaaaacagtttatgacatatccataagctgttttca 33192249  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #46
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 41 - 120
Target Start/End: Original strand, 33231921 - 33231998
Alignment:
Q  41 actgtttgagagagcttatggaaataacttatgacatgtccataaactattttcaaatgatttccataagcacttcaaga 120  Q
    ||||| ||||||||||||||||||  |||||||||  |||||||| || ||||||  |||||| ||||||| | ||||||    
T  33231921 actgtctgagagagcttatggaaaccacttatgac--gtccataagctgttttcagctgatttgcataagctcctcaaga 33231998  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #47
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 41 - 85
Target Start/End: Original strand, 39962268 - 39962312
Alignment:
Q  41 actgtttgagagagcttatggaaataacttatgacatgtccataa 85  Q
    |||||||| |||||||||| |||| || |||||||||||||||||    
T  39962268 actgtttgggagagcttatagaaacaatttatgacatgtccataa 39962312  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #48
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 4 - 60
Target Start/End: Complemental strand, 45425349 - 45425293
Alignment:
Q  4 ttatttgagcttatctactgagataagcacatataagactgtttgagagagcttatg 60  Q
    |||||||||||||| ||||| ||||| ||| ||| | |||||||||||||| |||||    
T  45425349 ttatttgagcttatttactgggataaacacttatgaaactgtttgagagagtttatg 45425293  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5 (Bit Score: 49; Significance: 7e-19; HSPs: 42)
Name: chr5
Description:

Target: chr5; HSP #1
Raw Score: 49; E-Value: 7e-19
Query Start/End: Original strand, 1 - 117
Target Start/End: Original strand, 11297125 - 11297241
Alignment:
Q  1 gacttatttgagcttatctactgagataagcacatataagactgtttgagagagcttatggaaataacttatgacatgtccataaactattttcaaatga 100  Q
    ||||||||| |||||||||| ||  |||| ||| | ||||||||||||| |||||||||||||| |||||| |||||||| || | |||||||||  | |    
T  11297125 gacttatttaagcttatctagtggcataaacacttgtaagactgtttgaaagagcttatggaaacaacttaagacatgtcaattagctattttcagctta 11297224  T
Q  101 tttccataagcacttca 117  Q
    ||| |||||||||||||    
T  11297225 ttttcataagcacttca 11297241  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #2
Raw Score: 49; E-Value: 7e-19
Query Start/End: Original strand, 1 - 109
Target Start/End: Original strand, 29590559 - 29590666
Alignment:
Q  1 gacttatttgagcttatctactgagataagcacatataagactgtttgagagagcttatggaaataacttatgacatgtccataaactattttcaaatga 100  Q
    ||||||||||||||||||||| || |||||||| ||| ||||||||||||  |||||||||| | |||||||||| |||||||||  | ||||||| | |    
T  29590559 gacttatttgagcttatctacagacataagcac-tatgagactgtttgagttagcttatggacaaaacttatgacttgtccataagttgttttcaactta 29590657  T
Q  101 tttccataa 109  Q
    |||||||||    
T  29590658 tttccataa 29590666  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #3
Raw Score: 46; E-Value: 5e-17
Query Start/End: Original strand, 1 - 85
Target Start/End: Complemental strand, 14980650 - 14980566
Alignment:
Q  1 gacttatttgagcttatctactgagataagcacatata-agactgtttgagagagcttatggaaataacttatgacatgtccataa 85  Q
    |||||||||||||||||||||||  |||||||| |||| |||||||||||||||||||||  |||| ||||||||||||| |||||    
T  14980650 gacttatttgagcttatctactggcataagcac-tatagagactgtttgagagagcttataaaaatgacttatgacatgtacataa 14980566  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #4
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 4 - 95
Target Start/End: Complemental strand, 32172791 - 32172700
Alignment:
Q  4 ttatttgagcttatctactgagataagcacatataagactgtttgagagagcttatggaaataacttatgacatgtccataaactattttca 95  Q
    |||||||||||||| ||||   |||||||| | | |||  ||||| ||||||||||||||| |||||||||||||||||||| | |||||||    
T  32172791 ttatttgagcttatatactagcataagcacttgtgagatagtttgggagagcttatggaaacaacttatgacatgtccataagccattttca 32172700  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #5
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 4 - 123
Target Start/End: Original strand, 37611147 - 37611266
Alignment:
Q  4 ttatttgagcttatctactgagataagcacatataagactgtttgagagagcttatggaaataacttatgacatgtccataaactattttcaaatgattt 103  Q
    |||||||| |||||||||||  | ||| || | | ||| |||||||||||||||||| ||| ||||| |||||||| ||||| || ||||||  | ||||    
T  37611147 ttatttgaacttatctactggcacaagtacttgtgagattgtttgagagagcttatgaaaacaacttgtgacatgttcataagctgttttcaggttattt 37611246  T
Q  104 ccataagcacttcaagatag 123  Q
    |||||||| || ||||||||    
T  37611247 ccataagctctccaagatag 37611266  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #6
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 4 - 123
Target Start/End: Original strand, 37787877 - 37787996
Alignment:
Q  4 ttatttgagcttatctactgagataagcacatataagactgtttgagagagcttatggaaataacttatgacatgtccataaactattttcaaatgattt 103  Q
    |||||||| |||||||||||  | ||| || | | ||| |||||||||||||||||| ||| ||||| |||||||| ||||| || ||||||  | ||||    
T  37787877 ttatttgaacttatctactggcacaagtacttgtgagattgtttgagagagcttatgaaaacaacttgtgacatgttcataagctgttttcaggttattt 37787976  T
Q  104 ccataagcacttcaagatag 123  Q
    |||||||| || ||||||||    
T  37787977 ccataagctctccaagatag 37787996  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #7
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 1 - 122
Target Start/End: Complemental strand, 11457239 - 11457119
Alignment:
Q  1 gacttatttgagcttatctactgagataagcacatataagactgtttgagagagcttatggaaataacttatgacatgtccataaactattttcaaatga 100  Q
    |||||||||||||||||||| ||  | || ||| | | |||||||||   |||||||||||||| |||||||||||||||||||| ||  ||||| || |    
T  11457239 gacttatttgagcttatctattggcagaaacacttgtgagactgttttgaagagcttatggaaacaacttatgacatgtccataagct-gtttcatatta 11457141  T
Q  101 tttccataagcacttcaagata 122  Q
    |||| |||||| || |||||||    
T  11457140 tttctataagctctccaagata 11457119  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #8
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 40 - 85
Target Start/End: Original strand, 38047847 - 38047892
Alignment:
Q  40 gactgtttgagagagcttatggaaataacttatgacatgtccataa 85  Q
    ||||||||| ||||||||||||||| ||||||||||||||||||||    
T  38047847 gactgtttgggagagcttatggaaacaacttatgacatgtccataa 38047892  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #9
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 3 - 123
Target Start/End: Complemental strand, 36639661 - 36639541
Alignment:
Q  3 cttatttgagcttatctactgagataagcacatataagactgtttgagagagcttatggaaataacttatgacatgtccataaactattttcaaatgatt 102  Q
    ||||||||| |||| ||| | | |||||||| ||||||||||||||||||| |||| | ||||  |||||||| |||||||||  | |||||   | |||    
T  36639661 cttatttgaacttacctatttacataagcacttataagactgtttgagagaacttacgaaaattgcttatgacgtgtccataagttgttttcctcttatt 36639562  T
Q  103 tccataagcacttcaagatag 123  Q
    | ||||||| |||||||||||    
T  36639561 ttcataagctcttcaagatag 36639541  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #10
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 43 - 111
Target Start/End: Complemental strand, 41052967 - 41052899
Alignment:
Q  43 tgtttgagagagcttatggaaataacttatgacatgtccataaactattttcaaatgatttccataagc 111  Q
    |||||| |||||||||| |||| ||| |||||||||| ||||||||||||| || | ||||||||||||    
T  41052967 tgtttgggagagcttatagaaacaacctatgacatgttcataaactatttttaacttatttccataagc 41052899  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #11
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 2 - 85
Target Start/End: Complemental strand, 35960552 - 35960470
Alignment:
Q  2 acttatttgagcttatctactgagataagcacatataagactgtttgagagagcttatggaaataacttatgacatgtccataa 85  Q
    ||||||||||||||||| | ||  ||||||| || | ||||| |||||||||||||||||||  |||||| |||||||||||||    
T  35960552 acttatttgagcttatcaattggcataagca-atgtcagactatttgagagagcttatggaagcaacttacgacatgtccataa 35960470  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #12
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 1 - 79
Target Start/End: Original strand, 499660 - 499738
Alignment:
Q  1 gacttatttgagcttatctactgagataagcacatataagactgtttgagagagcttatggaaataacttatgacatgt 79  Q
    |||||||||||||||| ||||||| |||||||| | | || ||||||| |||| |||||| ||| | ||||||||||||    
T  499660 gacttatttgagcttacctactgacataagcacctgttaggctgtttgggagaacttatgaaaacagcttatgacatgt 499738  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #13
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 5 - 111
Target Start/End: Original strand, 35095720 - 35095825
Alignment:
Q  5 tatttgagcttatctactgagataagcacatataagactgtttgagagagcttatggaaataacttatgacatgtccataaactattttcaaatgatttc 104  Q
    |||||||| ||||||||| | |||| |||  || ||||||||||  |||||||||||||||| |||||||||||| ||||  |  ||||||| | |||||    
T  35095720 tatttgagtttatctactaa-ataaacactaatgagactgtttggaagagcttatggaaatatcttatgacatgtacatatgccgttttcaacttatttc 35095818  T
Q  105 cataagc 111  Q
    |||||||    
T  35095819 cataagc 35095825  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #14
Raw Score: 34; E-Value: 0.0000000007
Query Start/End: Original strand, 4 - 85
Target Start/End: Original strand, 11095427 - 11095508
Alignment:
Q  4 ttatttgagcttatctactgagataagcacatataagactgtttgagagagcttatggaaataacttatgacatgtccataa 85  Q
    |||||| |||||||||||||| |||| ||| | | | | ||||||||||| ||| |||||| | ||||||||||||||||||    
T  11095427 ttatttaagcttatctactgacataaacacttgtgatattgtttgagagaacttgtggaaacagcttatgacatgtccataa 11095508  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #15
Raw Score: 34; E-Value: 0.0000000007
Query Start/End: Original strand, 3 - 88
Target Start/End: Original strand, 25720348 - 25720433
Alignment:
Q  3 cttatttgagcttatctactgagataagcacatataagactgtttgagagagcttatggaaataacttatgacatgtccataaact 88  Q
    |||||||||| ||||||||||  |||||||| | | ||||||| |||||||||||||  ||| || | ||||||||| ||||||||    
T  25720348 cttatttgaggttatctactggcataagcacttgtgagactgtctgagagagcttataaaaacaattcatgacatgttcataaact 25720433  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #16
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 1 - 85
Target Start/End: Original strand, 16016355 - 16016439
Alignment:
Q  1 gacttatttgagcttatctactgagataagcacatataagactgtttgagagagcttatggaaataacttatgacatgtccataa 85  Q
    |||||||||||||||||| | ||| |||||||| | | ||||||||| | | |||| || |||||||||||||| ||| ||||||    
T  16016355 gacttatttgagcttatcaaatgacataagcacttgtcagactgttttacaaagctaatagaaataacttatgaaatgcccataa 16016439  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #17
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 41 - 85
Target Start/End: Original strand, 16944944 - 16944988
Alignment:
Q  41 actgtttgagagagcttatggaaataacttatgacatgtccataa 85  Q
    |||||||||||||| | ||||||||||||||||| ||||||||||    
T  16944944 actgtttgagagaggtcatggaaataacttatgatatgtccataa 16944988  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #18
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 3 - 95
Target Start/End: Original strand, 34117479 - 34117570
Alignment:
Q  3 cttatttgagcttatctactgagataagcacatataagactgtttgagagagcttatggaaataacttatgacatgtccataaactattttca 95  Q
    |||||| ||||||||||||||  |||| ||| | | ||||||| || ||||||||||||| | ||||||||||||| |||||| || ||||||    
T  34117479 cttattggagcttatctactggcataaacacttgttagactgtctg-gagagcttatggagacaacttatgacatgcccataagctgttttca 34117570  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #19
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 3 - 87
Target Start/End: Original strand, 39257325 - 39257409
Alignment:
Q  3 cttatttgagcttatctactgagataagcacatataagactgtttgagagagcttatggaaataacttatgacatgtccataaac 87  Q
    ||||||| |||||||||||| | |||||||| | | ||||||| || || ||||||  |||| |||| |||||||||||||||||    
T  39257325 cttatttaagcttatctactaacataagcacttgtgagactgtgtgcgaaagcttagagaaacaactaatgacatgtccataaac 39257409  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #20
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 26 - 85
Target Start/End: Complemental strand, 10152450 - 10152391
Alignment:
Q  26 ataagcacatataagactgtttgagagagcttatggaaataacttatgacatgtccataa 85  Q
    |||||||||| | ||||| |||  ||||||||||| ||| ||||||||||||||||||||    
T  10152450 ataagcacatgtgagactattttggagagcttatgaaaacaacttatgacatgtccataa 10152391  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #21
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 50 - 109
Target Start/End: Original strand, 11700356 - 11700415
Alignment:
Q  50 gagagcttatggaaataacttatgacatgtccataaactattttcaaatgatttccataa 109  Q
    ||||| ||||||||| |||||||||||||||||||| || |||||| || |||| |||||    
T  11700356 gagagtttatggaaacaacttatgacatgtccataagctgttttcagattattttcataa 11700415  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #22
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 1 - 84
Target Start/End: Original strand, 12459930 - 12460013
Alignment:
Q  1 gacttatttgagcttatctactgagataagcacatataagactgtttgagagagcttatggaaataacttatgacatgtccata 84  Q
    |||||||||  |||||||| |||| |||||||| | | |||||||||| |||| | |||| ||| |||||||||||||| ||||    
T  12459930 gacttatttcggcttatctgctgacataagcacctgtgagactgtttgggagaacctatgaaaacaacttatgacatgttcata 12460013  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #23
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 50 - 85
Target Start/End: Original strand, 40499704 - 40499739
Alignment:
Q  50 gagagcttatggaaataacttatgacatgtccataa 85  Q
    ||||||||||||||| ||||||||||||||||||||    
T  40499704 gagagcttatggaaacaacttatgacatgtccataa 40499739  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #24
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 2 - 72
Target Start/End: Original strand, 12407660 - 12407730
Alignment:
Q  2 acttatttgagcttatctactgagataagcacatataagactgtttgagagagcttatggaaataacttat 72  Q
    |||||||||| |||||||| ||| |||| ||| | | |||| ||||||||||||||||| |||| ||||||    
T  12407660 acttatttgaacttatctattgacataaacacttgtgagacggtttgagagagcttatgaaaatgacttat 12407730  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #25
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 48 - 122
Target Start/End: Original strand, 13604825 - 13604899
Alignment:
Q  48 gagagagcttatggaaataacttatgacatgtccataaactattttcaaatgatttccataagcacttcaagata 122  Q
    ||||||||||||| ||| | |||||||||||||||||   | ||||||| | |||| ||||||| ||||||||||    
T  13604825 gagagagcttatgaaaacagcttatgacatgtccatacgttgttttcaacttattttcataagctcttcaagata 13604899  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #26
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 41 - 95
Target Start/End: Original strand, 28586735 - 28586789
Alignment:
Q  41 actgtttgagagagcttatggaaataacttatgacatgtccataaactattttca 95  Q
    |||||||| ||||||||||||||||| |||||||||| ||| ||| || ||||||    
T  28586735 actgtttgggagagcttatggaaatagcttatgacatatccgtaagctgttttca 28586789  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #27
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 3 - 85
Target Start/End: Complemental strand, 40534338 - 40534256
Alignment:
Q  3 cttatttgagcttatctactgagataagcacatataagactgtttgagagagcttatggaaataacttatgacatgtccataa 85  Q
    |||||||||| |||| |||||| |||| ||| | | | |||||||  |||||||||||||| || |||||||||||| |||||    
T  40534338 cttatttgagtttatttactgacataaacacttgtgatactgtttaggagagcttatggaagtagcttatgacatgttcataa 40534256  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #28
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 3 - 85
Target Start/End: Complemental strand, 42647029 - 42646948
Alignment:
Q  3 cttatttgagcttatctactgagataagcacatataagactgtttgagagagcttatggaaataacttatgacatgtccataa 85  Q
    |||||||||||||||||||||| || ||||| |  |||||| ||||  ||| |||||| ||||| |||||||||||| |||||    
T  42647029 cttatttgagcttatctactgacattagcac-ttgaagactatttggaagaacttatgaaaatagcttatgacatgttcataa 42646948  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #29
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 4 - 65
Target Start/End: Original strand, 7550450 - 7550511
Alignment:
Q  4 ttatttgagcttatctactgagataagcacatataagactgtttgagagagcttatggaaat 65  Q
    ||||||||||||||| ||||| ||||  || | | ||||| |||||||||||||||||||||    
T  7550450 ttatttgagcttatccactgacataattacttgtgagactctttgagagagcttatggaaat 7550511  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #30
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 45 - 78
Target Start/End: Original strand, 12242683 - 12242716
Alignment:
Q  45 tttgagagagcttatggaaataacttatgacatg 78  Q
    |||||||||||||||||||| |||||||||||||    
T  12242683 tttgagagagcttatggaaaaaacttatgacatg 12242716  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #31
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 6 - 95
Target Start/End: Complemental strand, 29336766 - 29336677
Alignment:
Q  6 atttgagcttatctactgagataagcacatataagactgtttgagagagcttatggaaataacttatgacatgtccataaactattttca 95  Q
    ||||||| ||||||| ||  | |||||| | | |||||| ||||||||||||||||||| |||||||| |||  ||||||| | ||||||    
T  29336766 atttgagtttatctattggcaaaagcacttgtgagactgattgagagagcttatggaaacaacttatggcatacccataaaatgttttca 29336677  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #32
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 1 - 66
Target Start/End: Complemental strand, 37969018 - 37968953
Alignment:
Q  1 gacttatttgagcttatctactgagataagcacatataagactgtttgagagagcttatggaaata 66  Q
    ||||| |||||||||||||||||| ||||| || | | | ||||||||||||| |||||| |||||    
T  37969018 gacttgtttgagcttatctactgacataagtacttgtgaaactgtttgagagatcttatgaaaata 37968953  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #33
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 45 - 85
Target Start/End: Original strand, 2569668 - 2569708
Alignment:
Q  45 tttgagagagcttatggaaataacttatgacatgtccataa 85  Q
    |||||||  ||||||||||||| ||||||||||||||||||    
T  2569668 tttgagattgcttatggaaatagcttatgacatgtccataa 2569708  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #34
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 3 - 75
Target Start/End: Original strand, 5377128 - 5377200
Alignment:
Q  3 cttatttgagcttatctactgagataagcacatataagactgtttgagagagcttatggaaataacttatgac 75  Q
    |||||||||||||||||| ||| |||||||| | |||||||||| | || | |||||| ||| | ||||||||    
T  5377128 cttatttgagcttatctattgacataagcacttgtaagactgttagcgataacttatgaaaacagcttatgac 5377200  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #35
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 3 - 79
Target Start/End: Original strand, 10125649 - 10125725
Alignment:
Q  3 cttatttgagcttatctactgagataagcacatataagactgtttgagagagcttatggaaataacttatgacatgt 79  Q
    ||||||| |||||||||||||| || ||||| | | | | ||| ||||||| |||||| ||| ||||||||||||||    
T  10125649 cttatttaagcttatctactgacatgagcacttgtgacattgtctgagagaacttatgtaaacaacttatgacatgt 10125725  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #36
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 9 - 85
Target Start/End: Original strand, 13781812 - 13781888
Alignment:
Q  9 tgagcttatctactgagataagcacatataagactgtttgagagagcttatggaaataacttatgacatgtccataa 85  Q
    |||||||||||||| | ||||| || | | ||||||||||  ||||||| | |||||| |||||||||||| |||||    
T  13781812 tgagcttatctactaacataagtacttgtgagactgtttggtagagcttgtagaaatagcttatgacatgtgcataa 13781888  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #37
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 45 - 85
Target Start/End: Complemental strand, 14364319 - 14364279
Alignment:
Q  45 tttgagagagcttatggaaataacttatgacatgtccataa 85  Q
    ||||||| |||||||||||| | ||||||||||||||||||    
T  14364319 tttgagaaagcttatggaaacagcttatgacatgtccataa 14364279  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #38
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 3 - 123
Target Start/End: Original strand, 17258814 - 17258934
Alignment:
Q  3 cttatttgagcttatctactgagataagcacatataagactgtttgagagagcttatggaaataacttatgacatgtccataaactattttcaaatgatt 102  Q
    |||||||||||||||| ||| | |||||||| | | | | | |||| |||| | |||| ||||| |||||||||||| ||||| || ||||||  | |||    
T  17258814 cttatttgagcttatcaactaacataagcacttgtgacattctttgggagaacctatgaaaatagcttatgacatgttcataagctgttttcagcttatt 17258913  T
Q  103 tccataagcacttcaagatag 123  Q
    | ||||||| ||||| |||||    
T  17258914 ttcataagctcttcaggatag 17258934  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #39
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 1 - 85
Target Start/End: Complemental strand, 34205382 - 34205298
Alignment:
Q  1 gacttatttgagcttatctactgagataagcacatataagactgtttgagagagcttatggaaataacttatgacatgtccataa 85  Q
    ||||||||||| ||||| |||||| |||||||  |||   ||| |||  ||||||||||||||| |||||||| ||||| |||||    
T  34205382 gacttatttgaacttatttactgacataagcatttatggaactattttggagagcttatggaaacaacttatgtcatgttcataa 34205298  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #40
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 161 - 193
Target Start/End: Complemental strand, 35960396 - 35960364
Alignment:
Q  161 ttgactttattttatgttttattatagaaatag 193  Q
    ||||||||||||||| |||||||||||||||||    
T  35960396 ttgactttattttatcttttattatagaaatag 35960364  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #41
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 39 - 111
Target Start/End: Original strand, 37526166 - 37526238
Alignment:
Q  39 agactgtttgagagagcttatggaaataacttatgacatgtccataaactattttcaaatgatttccataagc 111  Q
    |||||||||||||||||||||| | | ||| ||||||||||  |||| || ||||||  | ||||||||||||    
T  37526166 agactgtttgagagagcttatgaatacaacctatgacatgttaataagctgttttcagcttatttccataagc 37526238  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #42
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 39 - 111
Target Start/End: Original strand, 37690603 - 37690675
Alignment:
Q  39 agactgtttgagagagcttatggaaataacttatgacatgtccataaactattttcaaatgatttccataagc 111  Q
    |||||||||||||||||||||| | | ||| ||||||||||  |||| || ||||||  | ||||||||||||    
T  37690603 agactgtttgagagagcttatgaatacaacctatgacatgttaataagctgttttcagcttatttccataagc 37690675  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8 (Bit Score: 47; Significance: 1e-17; HSPs: 48)
Name: chr8
Description:

Target: chr8; HSP #1
Raw Score: 47; E-Value: 1e-17
Query Start/End: Original strand, 41 - 123
Target Start/End: Original strand, 31875564 - 31875646
Alignment:
Q  41 actgtttgagagagcttatggaaataacttatgacatgtccataaactattttcaaatgatttccataagcacttcaagatag 123  Q
    ||||||||||| |||||||||||| |||||||||||||||||||| | |||||||| | |||| ||||||| ||| |||||||    
T  31875564 actgtttgagaaagcttatggaaacaacttatgacatgtccataagccattttcaacttattttcataagctcttgaagatag 31875646  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #2
Raw Score: 46; E-Value: 5e-17
Query Start/End: Original strand, 1 - 107
Target Start/End: Complemental strand, 12361335 - 12361227
Alignment:
Q  1 gacttatttgagcttatctactgagataagcacatataagactgtttgagagag--cttatggaaataacttatgacatgtccataaactattttcaaat 98  Q
    ||||||||||| |||||||||||| ||||| || | | ||||| ||||||||||  ||||| |||||| |||||||||||||||||| || ||||||| |    
T  12361335 gacttatttgaacttatctactgatataagtacttgttagactctttgagagagatcttatagaaatagcttatgacatgtccataagctgttttcaact 12361236  T
Q  99 gatttccat 107  Q
     ||||||||    
T  12361235 tatttccat 12361227  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #3
Raw Score: 44; E-Value: 7e-16
Query Start/End: Original strand, 42 - 93
Target Start/End: Original strand, 30987961 - 30988012
Alignment:
Q  42 ctgtttgagagagcttatggaaataacttatgacatgtccataaactatttt 93  Q
    ||||||||||||||||||||||| |||||||||||||||||||| |||||||    
T  30987961 ctgtttgagagagcttatggaaacaacttatgacatgtccataagctatttt 30988012  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #4
Raw Score: 44; E-Value: 7e-16
Query Start/End: Original strand, 3 - 95
Target Start/End: Complemental strand, 43709403 - 43709309
Alignment:
Q  3 cttatttgagcttatctactgagataagcaca--tataagactgtttgagagagcttatggaaataacttatgacatgtccataaactattttca 95  Q
    |||||||||||||||||| || || | |||||  ||| ||| |||||| | ||||||||||||||||||||||||||||| |||| |||||||||    
T  43709403 cttatttgagcttatctattgtgacatgcacacttatgagagtgtttgggtgagcttatggaaataacttatgacatgtctataagctattttca 43709309  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #5
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 42 - 111
Target Start/End: Complemental strand, 8558760 - 8558691
Alignment:
Q  42 ctgtttgagagagcttatggaaataacttatgacatgtccataaactattttcaaatgatttccataagc 111  Q
    ||||||| ||||||||||||||| ||||| |||||||||||| ||||||||||| || |||| |||||||    
T  8558760 ctgtttgggagagcttatggaaacaacttgtgacatgtccatcaactattttcagattattttcataagc 8558691  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #6
Raw Score: 41; E-Value: 0.00000000000004
Query Start/End: Original strand, 3 - 79
Target Start/End: Original strand, 30191072 - 30191148
Alignment:
Q  3 cttatttgagcttatctactgagataagcacatataagactgtttgagagagcttatggaaataacttatgacatgt 79  Q
    |||||||||| ||||||| ||  |||||||| | | |||||||||| ||||||||||||||| ||||||||||||||    
T  30191072 cttatttgagtttatctattggcataagcacttgttagactgtttgggagagcttatggaaacaacttatgacatgt 30191148  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #7
Raw Score: 39; E-Value: 0.0000000000007
Query Start/End: Original strand, 41 - 95
Target Start/End: Original strand, 4055585 - 4055639
Alignment:
Q  41 actgtttgagagagcttatggaaataacttatgacatgtccataaactattttca 95  Q
    |||||||| ||||| |||| |||||||||||||||||||||||||||| ||||||    
T  4055585 actgtttgggagagtttatagaaataacttatgacatgtccataaactgttttca 4055639  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #8
Raw Score: 39; E-Value: 0.0000000000007
Query Start/End: Original strand, 1 - 111
Target Start/End: Complemental strand, 4560643 - 4560533
Alignment:
Q  1 gacttatttgagcttatctactgagataagcacatataagactgtttgagagagcttatggaaataacttatgacatgtccataaactattttcaaatga 100  Q
    |||||||||||||||||||| ||| |||||||| | | ||  ||||||  ||| |||||||||||||||||| |||||||  ||| || |||||| || |    
T  4560643 gacttatttgagcttatctattgacataagcacttgtgaggttgtttggaagaacttatggaaataacttataacatgtcagtaagctgttttcagatta 4560544  T
Q  101 tttccataagc 111  Q
    |||| ||||||    
T  4560543 tttcgataagc 4560533  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #9
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 6 - 83
Target Start/End: Complemental strand, 21130748 - 21130671
Alignment:
Q  6 atttgagcttatctactgagataagcacatataagactgtttgagagagcttatggaaataacttatgacatgtccat 83  Q
    |||||||||||| | |||| ||||  || | | |||||||||||||||||||||||||||| ||| ||||||||||||    
T  21130748 atttgagcttatgtgctgacataaatacttgtgagactgtttgagagagcttatggaaatagcttttgacatgtccat 21130671  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #10
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 39 - 95
Target Start/End: Complemental strand, 14949969 - 14949913
Alignment:
Q  39 agactgtttgagagagcttatggaaataacttatgacatgtccataaactattttca 95  Q
    |||||||||  ||||||||||| |||||||||||||||||||||||| || ||||||    
T  14949969 agactgtttaggagagcttatgaaaataacttatgacatgtccataagctgttttca 14949913  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #11
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 6 - 64
Target Start/End: Complemental strand, 24326167 - 24326109
Alignment:
Q  6 atttgagcttatctactgagataagcacatataagactgtttgagagagcttatggaaa 64  Q
    ||||||||||||||||||  |||||||| | | |||||||||| |||||||||||||||    
T  24326167 atttgagcttatctactggcataagcacttgtgagactgtttgggagagcttatggaaa 24326109  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #12
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 37 - 111
Target Start/End: Complemental strand, 27646009 - 27645935
Alignment:
Q  37 taagactgtttgagagagcttatggaaataacttatgacatgtccataaactattttcaaatgatttccataagc 111  Q
    |||||| ||||||||||||||||| | | |||||||||||| || |||| |||||||||| | ||||| ||||||    
T  27646009 taagaccgtttgagagagcttatgcatacaacttatgacatatctataagctattttcaacttatttctataagc 27645935  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #13
Raw Score: 34; E-Value: 0.0000000007
Query Start/End: Original strand, 1 - 85
Target Start/End: Complemental strand, 5069836 - 5069754
Alignment:
Q  1 gacttatttgagcttatctactgagataagcacatataagactgtttgagagagcttatggaaataacttatgacatgtccataa 85  Q
    |||||||||| ||||||||||||| | ||  || ||  |||||||||||||||||||||||||| | ||||| |||||| |||||    
T  5069836 gacttatttgtgcttatctactgacagaatgacgta--agactgtttgagagagcttatggaaacatcttataacatgttcataa 5069754  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #14
Raw Score: 34; E-Value: 0.0000000007
Query Start/End: Original strand, 42 - 95
Target Start/End: Original strand, 6509273 - 6509326
Alignment:
Q  42 ctgtttgagagagcttatggaaataacttatgacatgtccataaactattttca 95  Q
    |||||||||||||||||| |||| | ||||||||||| | ||||||||||||||    
T  6509273 ctgtttgagagagcttatagaaacagcttatgacatgcctataaactattttca 6509326  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #15
Raw Score: 34; E-Value: 0.0000000007
Query Start/End: Original strand, 2 - 95
Target Start/End: Complemental strand, 9700141 - 9700048
Alignment:
Q  2 acttatttgagcttatctactgagataagcacatataagactgtttgagagagcttatggaaataacttatgacatgtccataaactattttca 95  Q
    |||||||||||||||||||||   |||| ||| | | ||||| ||||||||||||| || ||  || ||||||||||||||||| || ||||||    
T  9700141 acttatttgagcttatctactagcataaacacttgtgagactatttgagagagcttgtgaaatcaatttatgacatgtccataagctgttttca 9700048  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #16
Raw Score: 34; E-Value: 0.0000000007
Query Start/End: Original strand, 38 - 79
Target Start/End: Complemental strand, 37461246 - 37461205
Alignment:
Q  38 aagactgtttgagagagcttatggaaataacttatgacatgt 79  Q
    |||||||| |||||||| ||||||||||||||||||||||||    
T  37461246 aagactgtatgagagagtttatggaaataacttatgacatgt 37461205  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #17
Raw Score: 34; E-Value: 0.0000000007
Query Start/End: Original strand, 1 - 82
Target Start/End: Original strand, 39551138 - 39551219
Alignment:
Q  1 gacttatttgagcttatctactgagataagcacatataagactgtttgagagagcttatggaaataacttatgacatgtcca 82  Q
    |||||||||||| |||||||| || |||||||  | | | |||||||| ||||  ||||||||| |||||||||||||||||    
T  39551138 gacttatttgagattatctacggatataagcatttgtgaaactgtttgggagaatttatggaaacaacttatgacatgtcca 39551219  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #18
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 1 - 81
Target Start/End: Complemental strand, 7008739 - 7008660
Alignment:
Q  1 gacttatttgagcttatctactgagataagcacatataagactgtttgagagagcttatggaaataacttatgacatgtcc 81  Q
    |||||||||||| ||||||||||  |||||||| | | |||| ||| |||||||||||| |||| ||| ||||||||||||    
T  7008739 gacttatttgagtttatctactggcataagcacttgtgagac-gttagagagagcttatagaaacaacctatgacatgtcc 7008660  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #19
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 39 - 123
Target Start/End: Original strand, 7918413 - 7918497
Alignment:
Q  39 agactgtttgagagagcttatggaaataacttatgacatgtccataaactattttcaaatgatttccataagcacttcaagatag 123  Q
    |||||||||| ||||||||||| ||| |||||| ||||||| ||||| || ||| ||| | ||||| |||||| || ||||||||    
T  7918413 agactgtttgggagagcttatgaaaacaacttaagacatgttcataagctgtttccaacttatttcaataagctctccaagatag 7918497  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #20
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 1 - 57
Target Start/End: Original strand, 11059658 - 11059714
Alignment:
Q  1 gacttatttgagcttatctactgagataagcacatataagactgtttgagagagctt 57  Q
    ||||||| |||||||||||| ||| |||||||| ||||||||||| || ||||||||    
T  11059658 gacttatgtgagcttatctaatgacataagcacttataagactgtctgggagagctt 11059714  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #21
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 1 - 85
Target Start/End: Complemental strand, 40071890 - 40071806
Alignment:
Q  1 gacttatttgagcttatctactgagataagcacatataagactgtttgagagagcttatggaaataacttatgacatgtccataa 85  Q
    ||||| ||||||||||||| ||   ||| | |||| | ||| |||||| ||||||||||||||| |||||||||||||| |||||    
T  40071890 gacttctttgagcttatctcctaccatatgaacatgtgagagtgtttgggagagcttatggaaacaacttatgacatgttcataa 40071806  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #22
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 1 - 52
Target Start/End: Original strand, 3634613 - 3634664
Alignment:
Q  1 gacttatttgagcttatctactgagataagcacatataagactgtttgagag 52  Q
    ||||||||||||||||||| |||| ||| |||| | ||||||||||||||||    
T  3634613 gacttatttgagcttatctgctgacatatgcacttgtaagactgtttgagag 3634664  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #23
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 10 - 85
Target Start/End: Original strand, 11569395 - 11569470
Alignment:
Q  10 gagcttatctactgagataagcacatataagactgtttgagagagcttatggaaataacttatgacatgtccataa 85  Q
    |||||||||| |||  |||| ||| | | ||||||||| |||||||||||||||| | |||||||||||| |||||    
T  11569395 gagcttatctgctggcataaccacttgtgagactgtttaagagagcttatggaaacagcttatgacatgtacataa 11569470  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #24
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 1 - 96
Target Start/End: Original strand, 43368629 - 43368724
Alignment:
Q  1 gacttatttgagcttatctactgagataagcacatataagactgtttgagagagcttatggaaataacttatgacatgtccataaactattttcaa 96  Q
    ||||||||||| |||||||||| | |||||||  | | |||||| |||  | |||||||| ||| |||||||||||||| ||| | ||||||||||    
T  43368629 gacttatttgatcttatctactaacataagcatttgtgagactggttgtaacagcttatgaaaacaacttatgacatgttcattagctattttcaa 43368724  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #25
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 1 - 111
Target Start/End: Complemental strand, 6950463 - 6950353
Alignment:
Q  1 gacttatttgagcttatctactgagataagcacatataagactgtttgagagagcttatggaaataacttatgacatgtccataaactattttcaaatga 100  Q
    |||||||||||| ||||||||||  |||| ||  | | ||| |||||| ||||||||||| ||| ||| ||||||||||| ||||  | ||||||  | |    
T  6950463 gacttatttgagtttatctactggcataaacatttgtgagattgtttgggagagcttatgtaaacaacctatgacatgtcgataagttgttttcagctta 6950364  T
Q  101 tttccataagc 111  Q
    |||||||||||    
T  6950363 tttccataagc 6950353  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #26
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 43 - 85
Target Start/End: Original strand, 9540967 - 9541009
Alignment:
Q  43 tgtttgagagagcttatggaaataacttatgacatgtccataa 85  Q
    |||||| ||||||||||||||| | ||||||||||||||||||    
T  9540967 tgtttgggagagcttatggaaacatcttatgacatgtccataa 9541009  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #27
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 39 - 85
Target Start/End: Complemental strand, 9572973 - 9572927
Alignment:
Q  39 agactgtttgagagagcttatggaaataacttatgacatgtccataa 85  Q
    |||||||||| |||| |||| | ||||||||||||||||||||||||    
T  9572973 agactgtttgtgagaacttacgaaaataacttatgacatgtccataa 9572927  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #28
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 4 - 74
Target Start/End: Original strand, 18931230 - 18931300
Alignment:
Q  4 ttatttgagcttatctactgagataagcacatataagactgtttgagagagcttatggaaataacttatga 74  Q
    |||||||||||||||||  || ||||||||  |  ||||||||| |||||||||||||||  |||||||||    
T  18931230 ttatttgagcttatctatagacataagcactcaagagactgtttaagagagcttatggaagaaacttatga 18931300  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #29
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 50 - 108
Target Start/End: Original strand, 37740405 - 37740462
Alignment:
Q  50 gagagcttatggaaataacttatgacatgtccataaactattttcaaatgatttccata 108  Q
    ||||| ||||||||| |||||||||||||||||| |||||||||||  | |||||||||    
T  37740405 gagagtttatggaaacaacttatgacatgtccat-aactattttcagcttatttccata 37740462  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #30
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 161 - 194
Target Start/End: Original strand, 1470944 - 1470977
Alignment:
Q  161 ttgactttattttatgttttattatagaaatagc 194  Q
    ||||||||||||||| ||||||||||||||||||    
T  1470944 ttgactttattttatcttttattatagaaatagc 1470977  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #31
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 153 - 194
Target Start/End: Complemental strand, 4558788 - 4558747
Alignment:
Q  153 aaaataacttgactttattttatgttttattatagaaatagc 194  Q
    ||||||| || |||||||||||| ||||||||||||||||||    
T  4558788 aaaataatttaactttattttatcttttattatagaaatagc 4558747  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #32
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 3 - 111
Target Start/End: Complemental strand, 11183682 - 11183576
Alignment:
Q  3 cttatttgagcttatctactgagataagcacatataagactgtttgagagagcttatggaaataacttatgacatgtccataaactattttcaaatgatt 102  Q
    |||||||||||||||||||||| | |||| |||   ||||| ||  |||||||||||  ||| ||||||||| ||||| |||| || ||||||  | |||    
T  11183682 cttatttgagcttatctactgacaaaagctcatgggagactctt--agagagcttataaaaacaacttatgatatgtctataagctgttttcagcttatt 11183585  T
Q  103 tccataagc 111  Q
    |||||||||    
T  11183584 tccataagc 11183576  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #33
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 7 - 76
Target Start/End: Original strand, 25881350 - 25881419
Alignment:
Q  7 tttgagcttatctactgagataagcacatataagactgtttgagagagcttatggaaataacttatgaca 76  Q
    |||||| ||||||||||| ||||| || | | ||||||||||| ||||||||  |||| |||||||||||    
T  25881350 tttgagtttatctactgacataagtacttgtgagactgtttgaaagagcttagagaaacaacttatgaca 25881419  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #34
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 49 - 94
Target Start/End: Original strand, 29168642 - 29168687
Alignment:
Q  49 agagagcttatggaaataacttatgacatgtccataaactattttc 94  Q
    |||||||||||| ||| | |||||||||||||||||| ||||||||    
T  29168642 agagagcttatgaaaacagcttatgacatgtccataagctattttc 29168687  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #35
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 56 - 105
Target Start/End: Original strand, 29262858 - 29262907
Alignment:
Q  56 ttatggaaataacttatgacatgtccataaactattttcaaatgatttcc 105  Q
    ||||||||| |||||||||||||| ||||| |||||||||| | ||||||    
T  29262858 ttatggaaacaacttatgacatgttcataagctattttcaagtaatttcc 29262907  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #36
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 1 - 109
Target Start/End: Complemental strand, 4511169 - 4511061
Alignment:
Q  1 gacttatttgagcttatctactgagataagcacatataagactgtttgagagagcttatggaaataacttatgacatgtccataaactattttcaaatga 100  Q
    ||||| ||| |||||||||||||  |||||||| | | ||||| || || ||| |||||| ||| |||||| |||||| || ||| |||||||||  | |    
T  4511169 gacttgttttagcttatctactggtataagcacttgtgagactattcgaaagaacttatgaaaacaacttaagacatgcccgtaagctattttcatttta 4511070  T
Q  101 tttccataa 109  Q
    |||||||||    
T  4511069 tttccataa 4511061  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #37
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 1 - 85
Target Start/End: Complemental strand, 4764035 - 4763951
Alignment:
Q  1 gacttatttgagcttatctactgagataagcacatataagactgtttgagagagcttatggaaataacttatgacatgtccataa 85  Q
    ||||||||||| |||||| |||   |||||||| ||| ||||| ||| ||||||||| || ||| | || |||||||||||||||    
T  4764035 gacttatttgaacttatccactagcataagcacctatgagactatttaagagagcttttgaaaacatctaatgacatgtccataa 4763951  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #38
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 3 - 79
Target Start/End: Complemental strand, 11376842 - 11376766
Alignment:
Q  3 cttatttgagcttatctactgagataagcacatataagactgtttgagagagcttatggaaataacttatgacatgt 79  Q
    |||||||||||||||||||||| |||||  | | | ||||| |||| |||| |||||| ||||| ||| ||||||||    
T  11376842 cttatttgagcttatctactgatataagttcttgtgagactatttgggagaacttatgaaaatagcttgtgacatgt 11376766  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #39
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 3 - 91
Target Start/End: Complemental strand, 11415293 - 11415205
Alignment:
Q  3 cttatttgagcttatctactgagataagcacatataagactgtttgagagagcttatggaaataacttatgacatgtccataaactatt 91  Q
    |||||||| |||||| |||| | ||||| || | | ||| ||||| |||||| ||||||||| | ||||| |||||||||||| |||||    
T  11415293 cttatttgtgcttatttactaacataagtacttgtgagattgttttagagagtttatggaaacagcttataacatgtccataagctatt 11415205  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #40
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 1 - 57
Target Start/End: Original strand, 14926911 - 14926967
Alignment:
Q  1 gacttatttgagcttatctactgagataagcacatataagactgtttgagagagctt 57  Q
    ||||||||||| ||||| |||||  |||||||| | | |||||||||||||||||||    
T  14926911 gacttatttgaacttatttactggcataagcacttgtgagactgtttgagagagctt 14926967  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #41
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 57 - 85
Target Start/End: Original strand, 25869251 - 25869279
Alignment:
Q  57 tatggaaataacttatgacatgtccataa 85  Q
    |||||||||||||||||||||||||||||    
T  25869251 tatggaaataacttatgacatgtccataa 25869279  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #42
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 14 - 82
Target Start/End: Complemental strand, 26410408 - 26410340
Alignment:
Q  14 ttatctactgagataagcacatataagactgtttgagagagcttatggaaataacttatgacatgtcca 82  Q
    ||||| ||||| |||||||| | | |||||| ||| ||||||||||||||| | || ||||||||||||    
T  26410408 ttatcaactgacataagcacttctgagactgcttgggagagcttatggaaacagctcatgacatgtcca 26410340  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #43
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 1 - 85
Target Start/End: Complemental strand, 26479926 - 26479842
Alignment:
Q  1 gacttatttgagcttatctactgagataagcacatataagactgtttgagagagcttatggaaataacttatgacatgtccataa 85  Q
    ||||||||| |||||||||| ||| | ||| || | | | ||| |||| ||||||||||||||| |||||||| |||||| ||||    
T  26479926 gacttatttaagcttatctattgacacaaggacttgtgaaactatttgcgagagcttatggaaacaacttatgtcatgtctataa 26479842  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #44
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 43 - 79
Target Start/End: Original strand, 30600320 - 30600356
Alignment:
Q  43 tgtttgagagagcttatggaaataacttatgacatgt 79  Q
    |||||||||||||||||||||| |||| |||||||||    
T  30600320 tgtttgagagagcttatggaaacaactcatgacatgt 30600356  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #45
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 39 - 79
Target Start/End: Original strand, 32156971 - 32157011
Alignment:
Q  39 agactgtttgagagagcttatggaaataacttatgacatgt 79  Q
    |||||||||||||| | ||||||||||||||||| ||||||    
T  32156971 agactgtttgagagggtttatggaaataacttattacatgt 32157011  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #46
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 3 - 123
Target Start/End: Complemental strand, 33553379 - 33553259
Alignment:
Q  3 cttatttgagcttatctactgagataagcacatataagactgtttgagagagcttatggaaataacttatgacatgtccataaactattttcaaatgatt 102  Q
    ||||||||||||||||||   | |||||||| | | |  |||||||  ||||||||| |||  |||||||||||||||| ||| || ||  ||  | |||    
T  33553379 cttatttgagcttatctatcaacataagcacttgtgatgctgtttggaagagcttattgaagcaacttatgacatgtccctaagctgttcccagcttatt 33553280  T
Q  103 tccataagcacttcaagatag 123  Q
    ||||||||| |||||||||||    
T  33553279 tccataagctcttcaagatag 33553259  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #47
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 3 - 110
Target Start/End: Complemental strand, 34849243 - 34849135
Alignment:
Q  3 cttatttgagcttatctactgagataagcacatataagactgtttgagagagcttatggaaataac-ttatgacatgtccataaactattttcaaatgat 101  Q
    |||||||||||||| ||||||  ||||| || | | |||||||||| |||| || ||| ||| ||| ||||||||||| ||||| |  ||||||  ||||    
T  34849243 cttatttgagcttagctactggcataagtacttttgagactgtttgggagaactaatgaaaacaactttatgacatgttcataagccgttttcagctgat 34849144  T
Q  102 ttccataag 110  Q
    |||||||||    
T  34849143 ttccataag 34849135  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #48
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 3 - 79
Target Start/End: Original strand, 44865497 - 44865573
Alignment:
Q  3 cttatttgagcttatctactgagataagcacatataagactgtttgagagagcttatggaaataacttatgacatgt 79  Q
    ||||| |||||||||||||||  |||||||| | ||| |||| ||  ||||||||||| |||| | |||||||||||    
T  44865497 cttatctgagcttatctactggtataagcacttgtaaaactgcttaggagagcttatgaaaatgatttatgacatgt 44865573  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7 (Bit Score: 47; Significance: 1e-17; HSPs: 45)
Name: chr7
Description:

Target: chr7; HSP #1
Raw Score: 47; E-Value: 1e-17
Query Start/End: Original strand, 1 - 123
Target Start/End: Original strand, 27626052 - 27626174
Alignment:
Q  1 gacttatttgagcttatctactgagataagcacatataagactgtttgagagagcttatggaaataacttatgacatgtccataaactattttcaaatga 100  Q
    ||||| ||| ||||||||||||||  | ||| | | | ||| ||||||||| |||||||||||| | ||||||||||||||||||||| |||| || | |    
T  27626052 gacttgtttcagcttatctactgacgtcagctcttgtgagattgtttgagaaagcttatggaaacagcttatgacatgtccataaactgttttaaactta 27626151  T
Q  101 tttccataagcacttcaagatag 123  Q
    ||||||||||| ||||| |||||    
T  27626152 tttccataagctcttcatgatag 27626174  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #2
Raw Score: 46; E-Value: 5e-17
Query Start/End: Original strand, 1 - 110
Target Start/End: Original strand, 48157049 - 48157158
Alignment:
Q  1 gacttatttgagcttatctactgagataagcacatataagactgtttgagagagcttatggaaataacttatgacatgtccataaactattttcaaatga 100  Q
    ||||||||||||||||| ||||||  ||||||  | | |||||||||| |||||||||| |||| |||||||| ||||||||||| || ||||||  | |    
T  48157049 gacttatttgagcttatttactgatttaagcatttgtgagactgtttgggagagcttatagaaacaacttatgccatgtccataagctgttttcagctta 48157148  T
Q  101 tttccataag 110  Q
    ||||||||||    
T  48157149 tttccataag 48157158  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #3
Raw Score: 41; E-Value: 0.00000000000004
Query Start/End: Original strand, 3 - 95
Target Start/End: Original strand, 36598287 - 36598379
Alignment:
Q  3 cttatttgagcttatctactgagataagcacatataagactgtttgagagagcttatggaaataacttatgacatgtccataaactattttca 95  Q
    ||||||||| |||| ||||||| |||||||  | | ||| |||||||||||||||||||||| | |||||||||||| ||||| || ||||||    
T  36598287 cttatttgaacttaactactgacataagcaattgtgagattgtttgagagagcttatggaaacatcttatgacatgttcataagctgttttca 36598379  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #4
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 1 - 95
Target Start/End: Complemental strand, 1418560 - 1418468
Alignment:
Q  1 gacttatttgagcttatctactgagataagcacatataagactgtttgagagagcttatggaaataacttatgacatgtccataaactattttca 95  Q
    |||||||||||||||||||||||  |||||||| ||| || ||||||| |||||||||| |||| |  |||   |||||||||||||||||||||    
T  1418560 gacttatttgagcttatctactggcataagcacttatgaggctgtttgtgagagcttatagaaaca--ttacaccatgtccataaactattttca 1418468  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #5
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 1 - 80
Target Start/End: Original strand, 39542229 - 39542308
Alignment:
Q  1 gacttatttgagcttatctactgagataagcacatataagactgtttgagagagcttatggaaataacttatgacatgtc 80  Q
    |||||||||||| |||||||||   |||||||| |   |||| |||| ||||||||||||||||||||||||||||||||    
T  39542229 gacttatttgagtttatctactagcataagcacttgcgagacagttttagagagcttatggaaataacttatgacatgtc 39542308  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #6
Raw Score: 39; E-Value: 0.0000000000007
Query Start/End: Original strand, 3 - 85
Target Start/End: Complemental strand, 33894766 - 33894684
Alignment:
Q  3 cttatttgagcttatctactgagataagcacatataagactgtttgagagagcttatggaaataacttatgacatgtccataa 85  Q
    |||||||||||||||| | ||| |||||||| | | |||||||||| ||||||||||| ||| | | ||||||||||||||||    
T  33894766 cttatttgagcttatcaaatgacataagcacttgtgagactgtttgtgagagcttatgaaaacagcatatgacatgtccataa 33894684  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #7
Raw Score: 39; E-Value: 0.0000000000007
Query Start/End: Original strand, 39 - 117
Target Start/End: Complemental strand, 44808261 - 44808183
Alignment:
Q  39 agactgtttgagagagcttatggaaataacttatgacatgtccataaactattttcaaatgatttccataagcacttca 117  Q
    ||||||||||| ||| |||||| |||||||||||||||||||||||| || ||||||  | |||| ||||||| |||||    
T  44808261 agactgtttgatagaccttatgaaaataacttatgacatgtccataacctgttttcagcttattttcataagcccttca 44808183  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #8
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 4 - 88
Target Start/End: Complemental strand, 8427151 - 8427067
Alignment:
Q  4 ttatttgagcttatctactgagataagcacatataagactgtttgagagagcttatggaaataacttatgacatgtccataaact 88  Q
    ||||||||||||||||||| | ||||| || | | |||||||||| | |||| |||||||| |||||| ||| ||||||||||||    
T  8427151 ttatttgagcttatctactaacataagtacttgtgagactgtttgggggagcctatggaaacaacttacgacgtgtccataaact 8427067  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #9
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 1 - 85
Target Start/End: Complemental strand, 23214996 - 23214912
Alignment:
Q  1 gacttatttgagcttatctactgagataagcacatataagactgtttgagagagcttatggaaataacttatgacatgtccataa 85  Q
    ||||||||||| ||||||||||   |||| ||| ||| |||||||||||||||  ||||| ||| |||||||||||| |||||||    
T  23214996 gacttatttgaccttatctactagcataaacacttatgagactgtttgagagaatttatgaaaacaacttatgacatttccataa 23214912  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #10
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 4 - 83
Target Start/End: Original strand, 30748966 - 30749045
Alignment:
Q  4 ttatttgagcttatctactgagataagcacatataagactgtttgagagagcttatggaaataacttatgacatgtccat 83  Q
    ||||||||||||||||||||| ||||||  || | ||||||||||||||| |||||| ||| ||  ||| ||||||||||    
T  30748966 ttatttgagcttatctactgacataagccaatgtgagactgtttgagagaacttatgaaaacaatctataacatgtccat 30749045  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #11
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 7 - 106
Target Start/End: Complemental strand, 45078413 - 45078314
Alignment:
Q  7 tttgagcttatctactgagataagcacatataagactgtttgagagagcttatggaaataacttatgacatgtccataaactattttcaaatgatttcca 106  Q
    |||||| ||||||||||| |||||||| | |  ||| |||   |||| ||||| ||||||||||||||||||||||||| || ||||||| | |||||||    
T  45078413 tttgagtttatctactgatataagcacttgtgtgacagttcaggagaacttatagaaataacttatgacatgtccataagctgttttcaacttatttcca 45078314  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #12
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 50 - 92
Target Start/End: Complemental strand, 5269578 - 5269536
Alignment:
Q  50 gagagcttatggaaataacttatgacatgtccataaactattt 92  Q
    ||||||||||||||||| |||| ||||||||||||||||||||    
T  5269578 gagagcttatggaaatagcttacgacatgtccataaactattt 5269536  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #13
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 1 - 111
Target Start/End: Original strand, 12234818 - 12234928
Alignment:
Q  1 gacttatttgagcttatctactgagataagcacatataagactgtttgagagagcttatggaaataacttatgacatgtccataaactattttcaaatga 100  Q
    |||||| ||||||||||||||||  || ||||| | | |||||| |||  | ||||||| |||| ||||||||||||||| |||| || ||||||  | |    
T  12234818 gacttagttgagcttatctactggcattagcacgtgtgagactgcttggaatagcttatagaaacaacttatgacatgtctataagctgttttcagctta 12234917  T
Q  101 tttccataagc 111  Q
    |||||||||||    
T  12234918 tttccataagc 12234928  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #14
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 13 - 111
Target Start/End: Original strand, 22387837 - 22387935
Alignment:
Q  13 cttatctactgagataagcacatataagactgtttgagagagcttatggaaataacttatgacatgtccataaactattttcaaatgatttccataagc 111  Q
    ||||| |||||| |||| ||| | | |||||||||| ||||||||||| ||| |||||||| |||||  ||||||| |||| || | ||||||||||||    
T  22387837 cttatttactgacataaacacgtgtgagactgtttgggagagcttatgaaaacaacttatggcatgtttataaactgtttttaacttatttccataagc 22387935  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #15
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 1 - 79
Target Start/End: Original strand, 25670515 - 25670593
Alignment:
Q  1 gacttatttgagcttatctactgagataagcacatataagactgtttgagagagcttatggaaataacttatgacatgt 79  Q
    |||||| ||||||||||||| ||| |||||| | | | ||||||||||||| | |||||| ||| ||||||||||||||    
T  25670515 gacttacttgagcttatctattgacataagctcttgtgagactgtttgagaaaacttatgaaaacaacttatgacatgt 25670593  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #16
Raw Score: 34; E-Value: 0.0000000007
Query Start/End: Original strand, 2 - 95
Target Start/End: Complemental strand, 30751659 - 30751566
Alignment:
Q  2 acttatttgagcttatctactgagataagcacatataagactgtttgagagagcttatggaaataacttatgacatgtccataaactattttca 95  Q
    |||||||| | |||||||||||| |||||||| | |  ||||||||| |||||||||| |||| |  ||||  |||||||||||||| ||||||    
T  30751659 acttatttaaacttatctactgacataagcacttgtgcgactgtttgggagagcttatagaaacagtttatagcatgtccataaactgttttca 30751566  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #17
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 2 - 85
Target Start/End: Complemental strand, 24048680 - 24048599
Alignment:
Q  2 acttatttgagcttatctactgagataagcacatataagactgtttgagagagcttatggaaataacttatgacatgtccataa 85  Q
    ||||||||||| ||||||||||| ||||| || || |||||||||||  ||||||||||  | || |||||| |||||||||||    
T  24048680 acttatttgagtttatctactgacataagtacttaaaagactgtttggaagagcttatg--attagcttatgtcatgtccataa 24048599  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #18
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 1 - 77
Target Start/End: Complemental strand, 31341276 - 31341200
Alignment:
Q  1 gacttatttgagcttatctactgagataagcacatataagactgtttgagagagcttatggaaataacttatgacat 77  Q
    ||||||||||||||| ||||||   |||| ||| | |||||||||||| ||||| ||||||||| |||| |||||||    
T  31341276 gacttatttgagcttttctacttgcataaacacttttaagactgtttgggagagtttatggaaacaactaatgacat 31341200  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #19
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 51 - 123
Target Start/End: Complemental strand, 36370760 - 36370688
Alignment:
Q  51 agagcttatggaaataacttatgacatgtccataaactattttcaaatgatttccataagcacttcaagatag 123  Q
    |||||||||| ||| |||||  ||||||||||||||| ||||| || | |||||||||||| ||||| |||||    
T  36370760 agagcttatgaaaaaaacttgggacatgtccataaacgatttttaatttatttccataagctcttcaggatag 36370688  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #20
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 1 - 85
Target Start/End: Original strand, 39551477 - 39551561
Alignment:
Q  1 gacttatttgagcttatctactgagataagcacatataagactgtttgagagagcttatggaaataacttatgacatgtccataa 85  Q
    |||||||||||| || |||||| | ||||  || ||||| | ||| ||| |||| ||||||||| ||||||||||||||||||||    
T  39551477 gacttatttgagtttttctacttacataatgacttataaaattgtctgaaagaggttatggaaacaacttatgacatgtccataa 39551561  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #21
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 44 - 92
Target Start/End: Original strand, 47427275 - 47427323
Alignment:
Q  44 gtttgagagagcttatggaaataacttatgacatgtccataaactattt 92  Q
    ||||||||||||||||||||| |||||||||||| || |||| ||||||    
T  47427275 gtttgagagagcttatggaaacaacttatgacatctctataagctattt 47427323  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #22
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 45 - 108
Target Start/End: Original strand, 3500940 - 3501003
Alignment:
Q  45 tttgagagagcttatggaaataacttatgacatgtccataaactattttcaaatgatttccata 108  Q
    |||| |||||||||||||||||||||||||||||| ||| | || ||||||  | |||||||||    
T  3500940 tttgtgagagcttatggaaataacttatgacatgtacatcagctgttttcagcttatttccata 3501003  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #23
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 8 - 111
Target Start/End: Complemental strand, 28165225 - 28165122
Alignment:
Q  8 ttgagcttatctactgagataagcacatataagactgtttgagagagcttatggaaataacttatgacatgtccataaactattttcaaatgatttccat 107  Q
    ||||||||||||||    |||||||| ||| ||||| ||||||| |||||||||||| | || | ||| ||| ||||| || ||||||| | ||||||||    
T  28165225 ttgagcttatctaccagcataagcacttatgagactctttgagatagcttatggaaacagctcaagacctgttcataagctgttttcaacttatttccat 28165126  T
Q  108 aagc 111  Q
    ||||    
T  28165125 aagc 28165122  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #24
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 55 - 114
Target Start/End: Complemental strand, 29290420 - 29290361
Alignment:
Q  55 cttatggaaataacttatgacatgtccataaactattttcaaatgatttccataagcact 114  Q
    |||||||||| |||||||||||||||||||| || |||||||   |||||| ||||||||    
T  29290420 cttatggaaacaacttatgacatgtccataagctgttttcaacatatttccgtaagcact 29290361  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #25
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 1 - 76
Target Start/End: Original strand, 34754739 - 34754814
Alignment:
Q  1 gacttatttgagcttatctactgagataagcacatataagactgtttgagagagcttatggaaataacttatgaca 76  Q
    ||||| |||||||||||||| ||| | || ||| ||| |||||||||||||||||||| | ||| | |||||||||    
T  34754739 gacttgtttgagcttatctattgacacaaacacttatgagactgtttgagagagcttaagaaaacatcttatgaca 34754814  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #26
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 51 - 86
Target Start/End: Original strand, 44989908 - 44989943
Alignment:
Q  51 agagcttatggaaataacttatgacatgtccataaa 86  Q
    |||||||||||||||| |||||||||||||||||||    
T  44989908 agagcttatggaaatagcttatgacatgtccataaa 44989943  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #27
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 3 - 77
Target Start/End: Original strand, 3836614 - 3836688
Alignment:
Q  3 cttatttgagcttatctactgagataagcacatataagactgtttgagagagcttatggaaataacttatgacat 77  Q
    |||||||||||||||||||||   ||||||| | | | |||||||| |||| |||||| ||||| ||||||||||    
T  3836614 cttatttgagcttatctactggcttaagcacttgtgaaactgtttgggagaacttatgaaaatagcttatgacat 3836688  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #28
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 5 - 111
Target Start/End: Original strand, 27121527 - 27121632
Alignment:
Q  5 tatttgagcttatctactgagataagcacatataagactgtttgagagagcttatggaaataacttatgacatgtccataaactattttcaaatgatttc 104  Q
    ||||||||||||| |||| | |||||||  | | ||| |||||| ||||| ||||||||||| |||||||||| || |||| || ||||||| |  ||||    
T  27121527 tatttgagcttatttactaatataagcatctgtgagattgtttgggagagtttatggaaatagcttatgacat-tcaataagctgttttcaacttgtttc 27121625  T
Q  105 cataagc 111  Q
    |||||||    
T  27121626 cataagc 27121632  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #29
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 43 - 85
Target Start/End: Complemental strand, 36538007 - 36537965
Alignment:
Q  43 tgtttgagagagcttatggaaataacttatgacatgtccataa 85  Q
    ||||||||||| |||||||||| |||||||||||||| |||||    
T  36538007 tgtttgagagaacttatggaaacaacttatgacatgttcataa 36537965  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #30
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 39 - 85
Target Start/End: Complemental strand, 39360126 - 39360080
Alignment:
Q  39 agactgtttgagagagcttatggaaataacttatgacatgtccataa 85  Q
    ||||||||||| |||| ||||||||| |||||||||||| |||||||    
T  39360126 agactgtttgatagagtttatggaaacaacttatgacatatccataa 39360080  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #31
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 152 - 194
Target Start/End: Complemental strand, 49060531 - 49060489
Alignment:
Q  152 aaaaataacttgactttattttatgttttattatagaaatagc 194  Q
    |||||||| ||||||||||||||| |||| |||||||||||||    
T  49060531 aaaaataatttgactttattttattttttgttatagaaatagc 49060489  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #32
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 61 - 122
Target Start/End: Complemental strand, 2013275 - 2013214
Alignment:
Q  61 gaaataacttatgacatgtccataaactattttcaaatgatttccataagcacttcaagata 122  Q
    |||| |||||||||| ||||||| |||| | ||||| | |||||||||| ||||||||||||    
T  2013275 gaaacaacttatgacttgtccatcaactgtcttcaatttatttccataatcacttcaagata 2013214  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #33
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 4 - 81
Target Start/End: Original strand, 2727290 - 2727367
Alignment:
Q  4 ttatttgagcttatctactgagataagcacatataagactgtttgagagagcttatggaaataacttatgacatgtcc 81  Q
    |||||||| |||||||||||| |||||||| | | |   |||||||||||||||||| |||||  ||| |||||||||    
T  2727290 ttatttgaacttatctactgacataagcacgtgtcaatttgtttgagagagcttatgaaaataggttacgacatgtcc 2727367  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #34
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 26 - 95
Target Start/End: Original strand, 12834916 - 12834985
Alignment:
Q  26 ataagcacatataagactgtttgagagagcttatggaaataacttatgacatgtccataaactattttca 95  Q
    |||||||| | | |||||| |||  |||| ||||||||| | ||||||||||||||||||||| ||||||    
T  12834916 ataagcacttctgagactgattggtagagattatggaaacagcttatgacatgtccataaactgttttca 12834985  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #35
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 3 - 88
Target Start/End: Original strand, 20547321 - 20547406
Alignment:
Q  3 cttatttgagcttatctactgagataagcacatataagactgtttgagagagcttatggaaataacttatgacatgtccataaact 88  Q
    ||||||| || ||||||| ||| |||| ||| | | | |||||||||||||||||||||| | | | ||||||||||| |||||||    
T  20547321 cttattttagtttatctaatgacataaacacttgtgatactgtttgagagagcttatggagacagcctatgacatgtcgataaact 20547406  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #36
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 39 - 88
Target Start/End: Complemental strand, 25422429 - 25422380
Alignment:
Q  39 agactgtttgagagagcttatggaaataacttatgacatgtccataaact 88  Q
    |||||||||| ||||||||||||||| | ||||||||||||  |||||||    
T  25422429 agactgtttgggagagcttatggaaacaccttatgacatgtttataaact 25422380  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #37
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 2 - 79
Target Start/End: Original strand, 28727693 - 28727770
Alignment:
Q  2 acttatttgagcttatctactgagataagcacatataagactgtttgagagagcttatggaaataacttatgacatgt 79  Q
    ||||||||||||||||||  |||  |||| || |   ||||||||||||||||||||||||||   ||||||||||||    
T  28727693 acttatttgagcttatcttttgacctaagaacttgcgagactgtttgagagagcttatggaaacggcttatgacatgt 28727770  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #38
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 48 - 85
Target Start/End: Original strand, 33645937 - 33645974
Alignment:
Q  48 gagagagcttatggaaataacttatgacatgtccataa 85  Q
    ||||||||||||||||| ||||||||||||||| ||||    
T  33645937 gagagagcttatggaaacaacttatgacatgtctataa 33645974  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #39
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 56 - 85
Target Start/End: Original strand, 39568308 - 39568337
Alignment:
Q  56 ttatggaaataacttatgacatgtccataa 85  Q
    ||||||||||||||||||||||||||||||    
T  39568308 ttatggaaataacttatgacatgtccataa 39568337  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #40
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 1 - 123
Target Start/End: Original strand, 44151405 - 44151531
Alignment:
Q  1 gacttatttgagcttatctactgagataagcacatataagactgtttgagagagcttatggaaataa----cttatgacatgtccataaactattttcaa 96  Q
    ||||||||||| ||||| |||||| ||||| || | | ||| | |||||||||||||||| ||| ||     |||||||||||||||||  | ||||||     
T  44151405 gacttatttgaacttatatactgacataagtacttgtgagattatttgagagagcttatgaaaacaatttttttatgacatgtccataagatgttttcag 44151504  T
Q  97 atgatttccataagcacttcaagatag 123  Q
     | ||||||||||||  ||||||||||    
T  44151505 cttatttccataagcttttcaagatag 44151531  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #41
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 51 - 96
Target Start/End: Complemental strand, 44687021 - 44686976
Alignment:
Q  51 agagcttatggaaataacttatgacatgtccataaactattttcaa 96  Q
    |||||||||||||| |||||||||||||||||| | || |||||||    
T  44687021 agagcttatggaaacaacttatgacatgtccatgagctgttttcaa 44686976  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #42
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 3 - 79
Target Start/End: Complemental strand, 8094445 - 8094369
Alignment:
Q  3 cttatttgagcttatctactgagataagcacatataagactgtttgagagagcttatggaaataacttatgacatgt 79  Q
    ||||||||||||||||||||   |||||||| | | ||||| |||||||||  ||||| ||| | ||||||||||||    
T  8094445 cttatttgagcttatctactagcataagcacttgtgagactatttgagagattttatgaaaacagcttatgacatgt 8094369  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #43
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 4 - 60
Target Start/End: Complemental strand, 25014087 - 25014031
Alignment:
Q  4 ttatttgagcttatctactgagataagcacatataagactgtttgagagagcttatg 60  Q
    ||||||||  ||||||||||| | |||||| | |||||||||||||||||| |||||    
T  25014087 ttatttgaatttatctactgacacaagcacttgtaagactgtttgagagagtttatg 25014031  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #44
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 45 - 77
Target Start/End: Complemental strand, 31149737 - 31149705
Alignment:
Q  45 tttgagagagcttatggaaataacttatgacat 77  Q
    |||||||||||||||| ||||||||||||||||    
T  31149737 tttgagagagcttatgaaaataacttatgacat 31149705  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #45
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 45 - 77
Target Start/End: Complemental strand, 31168029 - 31167997
Alignment:
Q  45 tttgagagagcttatggaaataacttatgacat 77  Q
    |||||||||||||||| ||||||||||||||||    
T  31168029 tttgagagagcttatgaaaataacttatgacat 31167997  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3 (Bit Score: 45; Significance: 2e-16; HSPs: 46)
Name: chr3
Description:

Target: chr3; HSP #1
Raw Score: 45; E-Value: 2e-16
Query Start/End: Original strand, 39 - 123
Target Start/End: Complemental strand, 37273237 - 37273153
Alignment:
Q  39 agactgtttgagagagcttatggaaataacttatgacatgtccataaactattttcaaatgatttccataagcacttcaagatag 123  Q
    |||||||||| ||||||||||||||| ||||||||||||||||||||  | ||||||| | |||||||||||  || ||||||||    
T  37273237 agactgtttgggagagcttatggaaacaacttatgacatgtccataagttgttttcaacttatttccataagttctccaagatag 37273153  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #2
Raw Score: 43; E-Value: 0.000000000000003
Query Start/End: Original strand, 2 - 88
Target Start/End: Original strand, 21872225 - 21872311
Alignment:
Q  2 acttatttgagcttatctactgagataagcacatataagactgtttgagagagcttatggaaataacttatgacatgtccataaact 88  Q
    |||||||||| |||||||||||| |||||||| | | ||||||||||  | ||||| || ||||| |||||||||||||||||||||    
T  21872225 acttatttgatcttatctactgacataagcacttgtgagactgtttggaaaagcttttgaaaatagcttatgacatgtccataaact 21872311  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #3
Raw Score: 43; E-Value: 0.000000000000003
Query Start/End: Original strand, 1 - 93
Target Start/End: Original strand, 25182919 - 25183008
Alignment:
Q  1 gacttatttgagcttatctactgagataagcacatataagactgtttgagagagcttatggaaataacttatgacatgtccataaactatttt 93  Q
    |||||||||||||||| |||||   ||||| || | | |||||||||||||||||||||| ||| |||||||||||| ||||||| |||||||    
T  25182919 gacttatttgagcttacctact---ataagaacttgtgagactgtttgagagagcttatgaaaacaacttatgacatatccataagctatttt 25183008  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #4
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 14 - 111
Target Start/End: Original strand, 20192548 - 20192645
Alignment:
Q  14 ttatctactgagataagcacatataagactgtttgagagagcttatggaaataacttatgacatgtccataaactattttcaaatgatttccataagc 111  Q
    ||||||| ||| |||||||| | | | ||||| ||||||||||||| |||| | |||||||||||||||||| || ||||||| | ||||||||||||    
T  20192548 ttatctattgacataagcacttcttacactgtatgagagagcttatagaaacagcttatgacatgtccataagctgttttcaactcatttccataagc 20192645  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #5
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 3 - 64
Target Start/End: Complemental strand, 22667542 - 22667481
Alignment:
Q  3 cttatttgagcttatctactgagataagcacatataagactgtttgagagagcttatggaaa 64  Q
    |||||||||||||||||||||| |||||||| | | |||||||||||||||| |||||||||    
T  22667542 cttatttgagcttatctactgacataagcacttgtgagactgtttgagagagtttatggaaa 22667481  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #6
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 3 - 64
Target Start/End: Complemental strand, 22724181 - 22724120
Alignment:
Q  3 cttatttgagcttatctactgagataagcacatataagactgtttgagagagcttatggaaa 64  Q
    |||||||||||||||||||||| |||||||| | | |||||||||||||||| |||||||||    
T  22724181 cttatttgagcttatctactgacataagcacttgtgagactgtttgagagagtttatggaaa 22724120  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #7
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 45 - 126
Target Start/End: Original strand, 49465909 - 49465990
Alignment:
Q  45 tttgagagagcttatggaaataacttatgacatgtccataaactattttcaaatgatttccataagcacttcaagatagatt 126  Q
    |||| |||||||||| |||| |||||||||||||||||| |||||||||||| | |||||||||| | ||| | ||||||||    
T  49465909 tttgtgagagcttatagaaacaacttatgacatgtccatgaactattttcaacttatttccataaactctttaggatagatt 49465990  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #8
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 1 - 106
Target Start/End: Original strand, 52323823 - 52323928
Alignment:
Q  1 gacttatttgagcttatctactgagataagcacatataagactgtttgagagagcttatggaaataacttatgacatgtccataaactattttcaaatga 100  Q
    |||||| ||||| | ||||||| | |||||||| |  ||||||||||| |||||||||| ||||||| |||||||| |||||||| || ||||||| | |    
T  52323823 gacttaattgagttgatctactaacataagcacttgcaagactgtttgtgagagcttattgaaataatttatgacacgtccataagctgttttcaactta 52323922  T
Q  101 tttcca 106  Q
    ||||||    
T  52323923 tttcca 52323928  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #9
Raw Score: 41; E-Value: 0.00000000000004
Query Start/End: Original strand, 3 - 95
Target Start/End: Complemental strand, 24624349 - 24624257
Alignment:
Q  3 cttatttgagcttatctactgagataagcacatataagactgtttgagagagcttatggaaataacttatgacatgtccataaactattttca 95  Q
    |||| |||| |||||||||| | || ||||| | ||||||||||||  |||||||||| ||| | ||||||||||||||||||||| ||||||    
T  24624349 cttagttgaacttatctactcacattagcacttgtaagactgtttggaagagcttatgaaaacagcttatgacatgtccataaactgttttca 24624257  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #10
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 5 - 123
Target Start/End: Original strand, 33965421 - 33965540
Alignment:
Q  5 tatttgagcttatctactgagataagcacatataagactgtttgagagagcttatggaaataacttatgacatgtccataaactattttca-aatgattt 103  Q
    ||||||||||||||||||||  ||| ||||| | |||||||||  |||| |||||||||||| | ||||||||| ||||||  ||||||||   |  |||    
T  33965421 tatttgagcttatctactgacttaaacacatgtgagactgtttaggagaccttatggaaatagcatatgacatgcccataagttattttcagcttttttt 33965520  T
Q  104 ccataagcacttcaagatag 123  Q
    |||||||| |||||||||||    
T  33965521 ccataagctcttcaagatag 33965540  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #11
Raw Score: 39; E-Value: 0.0000000000007
Query Start/End: Original strand, 6 - 64
Target Start/End: Original strand, 11041160 - 11041218
Alignment:
Q  6 atttgagcttatctactgagataagcacatataagactgtttgagagagcttatggaaa 64  Q
    ||||||||||||||||| |||||||||| | |  |||||||||||||||||||||||||    
T  11041160 atttgagcttatctactaagataagcacttgtgggactgtttgagagagcttatggaaa 11041218  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #12
Raw Score: 39; E-Value: 0.0000000000007
Query Start/End: Original strand, 2 - 72
Target Start/End: Complemental strand, 50211875 - 50211805
Alignment:
Q  2 acttatttgagcttatctactgagataagcacatataagactgtttgagagagcttatggaaataacttat 72  Q
    |||||||| |||||||||||| | |||||||| | ||||||||||||||||| |||||| ||| |||||||    
T  50211875 acttattttagcttatctactaacataagcacttgtaagactgtttgagagaacttatgaaaacaacttat 50211805  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #13
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 4 - 85
Target Start/End: Complemental strand, 41724350 - 41724269
Alignment:
Q  4 ttatttgagcttatctactgagataagcacatataagactgtttgagagagcttatggaaataacttatgacatgtccataa 85  Q
    |||||||| |||||||||||| ||||| || | | |||| ||||| || | |||||||||| ||||||||||||||||||||    
T  41724350 ttatttgaacttatctactgacataagtacttgtcagacagtttgtgaaaacttatggaaacaacttatgacatgtccataa 41724269  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #14
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 1 - 80
Target Start/End: Original strand, 11039707 - 11039786
Alignment:
Q  1 gacttatttgagcttatctactgagataagcacatataagactgtttgagagagcttatggaaataacttatgacatgtc 80  Q
    ||||||| |||||||| ||||| |||||| ||||| |||| |||||||||||||| | |||||| |||| || |||||||    
T  11039707 gacttatctgagcttagctactaagataaacacatgtaaggctgtttgagagagcatttggaaacaactaataacatgtc 11039786  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #15
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 1 - 95
Target Start/End: Original strand, 36646311 - 36646405
Alignment:
Q  1 gacttatttgagcttatctactgagataagcacatataagactgtttgagagagcttatggaaataacttatgacatgtccataaactattttca 95  Q
    ||||||||| ||| |||||| ||  ||| |||| | ||||||| |||| |||||||||||||||  ||||||| ||||||||||| || ||||||    
T  36646311 gacttatttaagcatatctattggcataggcacttgtaagactatttgggagagcttatggaaaccacttatggcatgtccataagctgttttca 36646405  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #16
Raw Score: 34; E-Value: 0.0000000007
Query Start/End: Original strand, 1 - 78
Target Start/End: Original strand, 40880877 - 40880954
Alignment:
Q  1 gacttatttgagcttatctactgagataagcacatataagactgtttgagagagcttatggaaataacttatgacatg 78  Q
    ||||||||| |||||||||| ||| || | || |  | |||||||||||||||||||||| ||| |||||||||||||    
T  40880877 gacttatttaagcttatctattgaaatgaacatacgtgagactgtttgagagagcttatgaaaacaacttatgacatg 40880954  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #17
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 39 - 83
Target Start/End: Complemental strand, 1810080 - 1810036
Alignment:
Q  39 agactgtttgagagagcttatggaaataacttatgacatgtccat 83  Q
    ||||| |||||||||||||| ||||| ||||||||||||||||||    
T  1810080 agactatttgagagagcttacggaaacaacttatgacatgtccat 1810036  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #18
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 3 - 71
Target Start/End: Original strand, 24158447 - 24158515
Alignment:
Q  3 cttatttgagcttatctactgagataagcacatataagactgtttgagagagcttatggaaataactta 71  Q
    ||||||| |||||||||||||| ||||| || | | | |||||||| ||||||||||||||| ||||||    
T  24158447 cttatttaagcttatctactgacataagtacttgtgaaactgtttgcgagagcttatggaaacaactta 24158515  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #19
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 1 - 85
Target Start/End: Complemental strand, 24281188 - 24281104
Alignment:
Q  1 gacttatttgagcttatctactgagataagcacatataagactgtttgagagagcttatggaaataacttatgacatgtccataa 85  Q
    ||||||||||||  |||||||||  |||||||| | |  || |||||||||||||||||| ||| ||||||||| || |||||||    
T  24281188 gacttatttgagtctatctactggtataagcacttgtgtgattgtttgagagagcttatgaaaacaacttatgatatctccataa 24281104  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #20
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 4 - 76
Target Start/End: Complemental strand, 27793010 - 27792938
Alignment:
Q  4 ttatttgagcttatctactgagataagcacatataagactgtttgagagagcttatggaaataacttatgaca 76  Q
    ||||||||||||||||| ||| |||| ||||  | ||||||||||| |||| ||||||||||| ||| |||||    
T  27793010 ttatttgagcttatctattgacataaacacacgtgagactgtttgatagagtttatggaaatagcttttgaca 27792938  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #21
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 1 - 85
Target Start/End: Complemental strand, 36200237 - 36200153
Alignment:
Q  1 gacttatttgagcttatctactgagataagcacatataagactgtttgagagagcttatggaaataacttatgacatgtccataa 85  Q
    |||||||||||||||||||| ||| |  ||||| | | ||| |||| ||||||| || || ||| ||||||||||||||||||||    
T  36200237 gacttatttgagcttatctaatgaaaacagcacttgtgagaatgttggagagagtttttgtaaacaacttatgacatgtccataa 36200153  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #22
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 5 - 85
Target Start/End: Complemental strand, 37155138 - 37155058
Alignment:
Q  5 tatttgagcttatctactgagataagcacatataagactgtttgagagagcttatggaaataacttatgacatgtccataa 85  Q
    |||||||||| ||||||| | |||| ||  | | |||||||| || |||| ||||||||||||||||| ||||||||||||    
T  37155138 tatttgagctaatctacttacataaacatttgtgagactgttcgaaagagtttatggaaataacttattacatgtccataa 37155058  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #23
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 5 - 85
Target Start/End: Complemental strand, 37200493 - 37200413
Alignment:
Q  5 tatttgagcttatctactgagataagcacatataagactgtttgagagagcttatggaaataacttatgacatgtccataa 85  Q
    |||||||||| ||||||| | |||| ||  | | |||||||| || |||| ||||||||||||||||| ||||||||||||    
T  37200493 tatttgagctaatctacttacataaacatttgtgagactgttcgaaagagtttatggaaataacttattacatgtccataa 37200413  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #24
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 8 - 79
Target Start/End: Complemental strand, 50004787 - 50004715
Alignment:
Q  8 ttgagcttatctactgagataagcacatataagactgtttgagagagc-ttatggaaataacttatgacatgt 79  Q
    ||||| |||| |||||| |||||||  | |||||||||||||||| || ||||||||| ||||||||||||||    
T  50004787 ttgagtttatttactgacataagcaattgtaagactgtttgagagggccttatggaaacaacttatgacatgt 50004715  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #25
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 40 - 79
Target Start/End: Original strand, 2606278 - 2606317
Alignment:
Q  40 gactgtttgagagagcttatggaaataacttatgacatgt 79  Q
    |||||||||||||| |||||||||| ||||||||||||||    
T  2606278 gactgtttgagagatcttatggaaacaacttatgacatgt 2606317  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #26
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 4 - 79
Target Start/End: Original strand, 10540425 - 10540500
Alignment:
Q  4 ttatttgagcttatctactgagataagcacatataagactgtttgagagagcttatggaaataacttatgacatgt 79  Q
    ||||||||| ||||||| | | |||||||| ||| ||||| |||  ||||||||||||||| || |||||||||||    
T  10540425 ttatttgagtttatctattcacataagcacttatcagactctttaggagagcttatggaaacaatttatgacatgt 10540500  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #27
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 42 - 85
Target Start/End: Original strand, 14598523 - 14598566
Alignment:
Q  42 ctgtttgagagagcttatggaaataacttatgacatgtccataa 85  Q
    ||||||| | ||| ||||||||||||||||||||||||||||||    
T  14598523 ctgtttgggggagtttatggaaataacttatgacatgtccataa 14598566  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #28
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 42 - 85
Target Start/End: Original strand, 42817192 - 42817235
Alignment:
Q  42 ctgtttgagagagcttatggaaataacttatgacatgtccataa 85  Q
    ||||||||||||||||||||||| | | ||||||||||||||||    
T  42817192 ctgtttgagagagcttatggaaacagcatatgacatgtccataa 42817235  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #29
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 39 - 85
Target Start/End: Original strand, 11039306 - 11039352
Alignment:
Q  39 agactgtttgagagagcttatggaaataacttatgacatgtccataa 85  Q
    ||||||||||| |||||||||||||| |  |||||||||||||||||    
T  11039306 agactgtttgaaagagcttatggaaacatattatgacatgtccataa 11039352  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #30
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 39 - 85
Target Start/End: Complemental strand, 21574593 - 21574547
Alignment:
Q  39 agactgtttgagagagcttatggaaataacttatgacatgtccataa 85  Q
    |||||||||| ||||||||||| ||| |||||||||||||| |||||    
T  21574593 agactgtttgggagagcttatgaaaacaacttatgacatgttcataa 21574547  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #31
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 1 - 111
Target Start/End: Complemental strand, 26603334 - 26603224
Alignment:
Q  1 gacttatttgagcttatctactgagataagcacatataagactgtttgagagagcttatggaaataacttatgacatgtccataaactattttcaaatga 100  Q
    |||| ||||||  ||| ||||||  |||||||||| | ||| ||||||   ||||| ||||||| |||||||||||||||||||   || |||||| | |    
T  26603334 gactgatttgaatttacctactgtcataagcacatgtgagattgtttggtggagctcatggaaacaacttatgacatgtccatattttaatttcaactta 26603235  T
Q  101 tttccataagc 111  Q
    |||||||||||    
T  26603234 tttccataagc 26603224  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #32
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 43 - 85
Target Start/End: Complemental strand, 31403117 - 31403075
Alignment:
Q  43 tgtttgagagagcttatggaaataacttatgacatgtccataa 85  Q
    |||||||||||||||||||||| ||||||| ||||||| ||||    
T  31403117 tgtttgagagagcttatggaaacaacttattacatgtctataa 31403075  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #33
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 39 - 85
Target Start/End: Original strand, 49772635 - 49772681
Alignment:
Q  39 agactgtttgagagagcttatggaaataacttatgacatgtccataa 85  Q
    |||||||||  ||||||||||||||| ||||||||| ||||||||||    
T  49772635 agactgtttaggagagcttatggaaacaacttatgagatgtccataa 49772681  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #34
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 153 - 194
Target Start/End: Complemental strand, 1395661 - 1395620
Alignment:
Q  153 aaaataacttgactttattttatgttttattatagaaatagc 194  Q
    ||||||| ||||||||||||||| |||| |||||||||||||    
T  1395661 aaaataatttgactttattttatcttttgttatagaaatagc 1395620  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #35
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 3 - 60
Target Start/End: Original strand, 25699129 - 25699186
Alignment:
Q  3 cttatttgagcttatctactgagataagcacatataagactgtttgagagagcttatg 60  Q
    |||||||||| ||||||| ||| |||||||| ||| |||||  |||||||||||||||    
T  25699129 cttatttgagtttatctattgacataagcacttatgagacttcttgagagagcttatg 25699186  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #36
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 14 - 111
Target Start/End: Complemental strand, 43115184 - 43115087
Alignment:
Q  14 ttatctactgagataagcacatataagactgtttgagagagcttatggaaataacttatgacatgtccataaactattttcaaatgatttccataagc 111  Q
    ||||||| ||| |||| ||| | | ||| ||||||  |||| ||||||||| ||||||||||||||||||||  | ||||||  | ||||||||||||    
T  43115184 ttatctattgacataatcacttgtgagattgtttggaagagtttatggaaacaacttatgacatgtccataacttgttttcagcttatttccataagc 43115087  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #37
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 13 - 82
Target Start/End: Original strand, 53735913 - 53735982
Alignment:
Q  13 cttatctactgagataagcacatataagactgtttgagagagcttatggaaataacttatgacatgtcca 82  Q
    ||||| |||||| |||| |||  || ||| ||||||||||| ||||| |||| |||||||||||||||||    
T  53735913 cttatttactgacataaacactaatgagattgtttgagagaacttattgaaacaacttatgacatgtcca 53735982  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #38
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 1 - 81
Target Start/End: Complemental strand, 1395780 - 1395700
Alignment:
Q  1 gacttatttgagcttatctactgagataagcacatataagactgtttgagagagcttatggaaataacttatgacatgtcc 81  Q
    |||||||||||||||||||  |||  ||||||| |   ||||||||||||||||||||   ||| |||||| |||||||||    
T  1395780 gacttatttgagcttatcttatgacgtaagcacttgcgagactgtttgagagagcttacaaaaacaacttaagacatgtcc 1395700  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #39
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 1 - 85
Target Start/End: Complemental strand, 2923619 - 2923535
Alignment:
Q  1 gacttatttgagcttatctactgagataagcacatataagactgtttgagagagcttatggaaataacttatgacatgtccataa 85  Q
    |||||||| ||||||||||| ||| ||||| || |  |||||||||||  ||| ||||| |||| ||||||  ||||||||||||    
T  2923619 gacttattcgagcttatctattgacataagtacttgaaagactgtttggaagaacttatagaaacaacttactacatgtccataa 2923535  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #40
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 1 - 85
Target Start/End: Original strand, 11040543 - 11040627
Alignment:
Q  1 gacttatttgagcttatctactgagataagcacatataagactgtttgagagagcttatggaaataacttatgacatgtccataa 85  Q
    ||||||| |||||||||||||| | |||| ||| | ||| |||| |||||||||| |||| ||| |   ||||||||||||||||    
T  11040543 gacttatatgagcttatctactcacataaacacttctaatactgattgagagagcatatgaaaacagagtatgacatgtccataa 11040627  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #41
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 4 - 60
Target Start/End: Original strand, 20210860 - 20210916
Alignment:
Q  4 ttatttgagcttatctactgagataagcacatataagactgtttgagagagcttatg 60  Q
    ||||||||| ||||||||||| |||| ||| | | ||||||||||||||| ||||||    
T  20210860 ttatttgaggttatctactgacataaccacttgtgagactgtttgagagatcttatg 20210916  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #42
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 2 - 78
Target Start/End: Original strand, 24625272 - 24625348
Alignment:
Q  2 acttatttgagcttatctactgagataagcacatataagactgtttgagagagcttatggaaataacttatgacatg 78  Q
    |||| ||||||||||| |||||  |||||||| | |||| ||| ||||||||||||||  ||| || ||||||||||    
T  24625272 acttgtttgagcttatttactggcataagcacttgtaaggctgattgagagagcttattaaaacaatttatgacatg 24625348  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #43
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 1 - 109
Target Start/End: Complemental strand, 26542677 - 26542570
Alignment:
Q  1 gacttatttgagcttatctactgagataagcacatataagactgtttgagagagcttatggaaataacttatgacatgtccataaactattttcaaatga 100  Q
    |||||||||||  ||||||||| | ||||| || | ||||||||||||  ||||||||  |||| ||||||||| ||||| ||||  | ||||||| | |    
T  26542677 gacttatttgat-ttatctactcacataagtacttgtaagactgtttggaagagcttactgaaacaacttatgatatgtctataacttgttttcaactta 26542579  T
Q  101 tttccataa 109  Q
    |||||||||    
T  26542578 tttccataa 26542570  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #44
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 3 - 59
Target Start/End: Original strand, 27795944 - 27796000
Alignment:
Q  3 cttatttgagcttatctactgagataagcacatataagactgtttgagagagcttat 59  Q
    |||||||||||||||||||||  |||||||| | | | ||||||| |||||||||||    
T  27795944 cttatttgagcttatctactggcataagcacttgtgaaactgtttaagagagcttat 27796000  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #45
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 39 - 95
Target Start/End: Complemental strand, 29113565 - 29113509
Alignment:
Q  39 agactgtttgagagagcttatggaaataacttatgacatgtccataaactattttca 95  Q
    ||||||||||||||||||||  |||| ||||||| ||||| | |||| |||||||||    
T  29113565 agactgtttgagagagcttacagaaacaacttataacatgcctataagctattttca 29113509  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #46
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 43 - 95
Target Start/End: Complemental strand, 31010501 - 31010449
Alignment:
Q  43 tgtttgagagagcttatggaaataacttatgacatgtccataaactattttca 95  Q
    |||||| || ||||||| |||| |||||||||||||||||||| || ||||||    
T  31010501 tgtttgtgaaagcttatagaaacaacttatgacatgtccataagctgttttca 31010449  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1 (Bit Score: 43; Significance: 0.000000000000003; HSPs: 53)
Name: chr1
Description:

Target: chr1; HSP #1
Raw Score: 43; E-Value: 0.000000000000003
Query Start/End: Original strand, 3 - 93
Target Start/End: Complemental strand, 1662712 - 1662622
Alignment:
Q  3 cttatttgagcttatctactgagataagcacatataagactgtttgagagagcttatggaaataacttatgacatgtccataaactatttt 93  Q
    ||||||||||||||||||||   ||||| ||||   ||||| |||| ||||||||| ||||| ||||||||||||||||||||| ||||||    
T  1662712 cttatttgagcttatctactagcataagtacatgcgagactatttgcgagagcttacggaaacaacttatgacatgtccataaaatatttt 1662622  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #2
Raw Score: 43; E-Value: 0.000000000000003
Query Start/End: Original strand, 1 - 111
Target Start/End: Original strand, 30259415 - 30259525
Alignment:
Q  1 gacttatttgagcttatctactgagataagcacatataagactgtttgagagagcttatggaaataacttatgacatgtccataaactattttcaaatga 100  Q
    |||||||||||| ||| |||| |  |||| ||||| |||| |||||||| ||||||||| |||| |||||| |||||||| ||||| | ||||||| | |    
T  30259415 gacttatttgagtttacctaccggcataaacacatttaaggctgtttgaaagagcttatagaaacaacttacgacatgtcaataaattgttttcaactta 30259514  T
Q  101 tttccataagc 111  Q
    |||||||||||    
T  30259515 tttccataagc 30259525  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #3
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 1 - 110
Target Start/End: Original strand, 5591896 - 5592004
Alignment:
Q  1 gacttatttgagcttatctactgagataagcacatataagactgtttgagagagcttatggaaataacttatgacatgtccataaactattttcaaatga 100  Q
    |||||||||||||||||||||||  |||||||  | || ||||||||||||||||||||| ||| | ||||||||| || ||||| |  ||||||| | |    
T  5591896 gacttatttgagcttatctactggtataagcatgtgta-gactgtttgagagagcttatgaaaacagcttatgacacgtgcataagccgttttcaattta 5591994  T
Q  101 tttccataag 110  Q
    ||||||||||    
T  5591995 tttccataag 5592004  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #4
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 1 - 82
Target Start/End: Original strand, 23373242 - 23373323
Alignment:
Q  1 gacttatttgagcttatctactgagataagcacatataagactgtttgagagagcttatggaaataacttatgacatgtcca 82  Q
    ||||||||||| ||| |||||||| |||||||| | | ||| |||||| |||||||||| |||| |||||||||||||||||    
T  23373242 gacttatttgaacttgtctactgatataagcacttgtgagattgtttgggagagcttatagaaacaacttatgacatgtcca 23373323  T

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Target: chr1; HSP #5
Raw Score: 41; E-Value: 0.00000000000004
Query Start/End: Original strand, 3 - 95
Target Start/End: Complemental strand, 15581393 - 15581301
Alignment:
Q  3 cttatttgagcttatctactgagataagcacatataagactgtttgagagagcttatggaaataacttatgacatgtccataaactattttca 95  Q
    ||||||| |||||||||||||| |||||||| | | ||| ||||||  |||||| ||||||| ||||||||||||||| |||| || ||||||    
T  15581393 cttattttagcttatctactgacataagcacttgtgagattgtttggaagagctaatggaaacaacttatgacatgtctataagctgttttca 15581301  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #6
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 3 - 86
Target Start/End: Original strand, 4549472 - 4549555
Alignment:
Q  3 cttatttgagcttatctactgagataagcacatataagactgtttgagagagcttatggaaataacttatgacatgtccataaa 86  Q
    |||||||||| ||||||||||  |||||||  | | |||||||||| |||||||||| |||| ||||||||||||||| |||||    
T  4549472 cttatttgagattatctactggcataagcatttctgagactgtttgggagagcttatagaaacaacttatgacatgtctataaa 4549555  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #7
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 40 - 83
Target Start/End: Original strand, 38867799 - 38867842
Alignment:
Q  40 gactgtttgagagagcttatggaaataacttatgacatgtccat 83  Q
    ||||||||||||||||||||||||||||||||||| ||||||||    
T  38867799 gactgtttgagagagcttatggaaataacttatgatatgtccat 38867842  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #8
Raw Score: 39; E-Value: 0.0000000000007
Query Start/End: Original strand, 11 - 85
Target Start/End: Complemental strand, 44422830 - 44422756
Alignment:
Q  11 agcttatctactgagataagcacatataagactgtttgagagagcttatggaaataacttatgacatgtccataa 85  Q
    ||||||||||||| ||||| ||| | | ||||||| || ||||||||||| ||||| ||||||||||||||||||    
T  44422830 agcttatctactgggataaacacttttgagactgtctgggagagcttatgaaaatagcttatgacatgtccataa 44422756  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #9
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 45 - 94
Target Start/End: Original strand, 11560535 - 11560584
Alignment:
Q  45 tttgagagagcttatggaaataacttatgacatgtccataaactattttc 94  Q
    ||||| |||||||||||||| |||||||||||| ||||||||||||||||    
T  11560535 tttgatagagcttatggaaacaacttatgacatatccataaactattttc 11560584  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #10
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 1 - 109
Target Start/End: Original strand, 3597210 - 3597318
Alignment:
Q  1 gacttatttgagcttatctactgagataagcacatataagactgtttgagagagcttatggaaataacttatgacatgtccataaactattttcaaatga 100  Q
    |||||||||||| ||||||| ||| |||| ||| | | ||||||||||  |||| | ||  ||||||||||||||||| |||||| |||||||||  | |    
T  3597210 gacttatttgaggttatctaatgatataaccacttgtgagactgtttggaagagttgataaaaataacttatgacatggccataagctattttcagctta 3597309  T
Q  101 tttccataa 109  Q
    |||||||||    
T  3597310 tttccataa 3597318  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #11
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 5 - 85
Target Start/End: Original strand, 32515374 - 32515454
Alignment:
Q  5 tatttgagcttatctactgagataagcacatataagactgtttgagagagcttatggaaataacttatgacatgtccataa 85  Q
    |||||||| ||||||||| | |||||||| | | |||||||||| ||||||||||||||| | | ||||||||||| ||||    
T  32515374 tatttgagtttatctactaacataagcacttgtgagactgtttgggagagcttatggaaacagcgtatgacatgtcaataa 32515454  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #12
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 1 - 84
Target Start/End: Original strand, 4033946 - 4034029
Alignment:
Q  1 gacttatttgagcttatctactgagataagcacatataagactgtttgagagagcttatggaaataacttatgacatgtccata 84  Q
    |||| |||||| ||| |||||||  |||| ||| | | ||| |||||||||||||||||| |||||||||||||| ||||||||    
T  4033946 gactcatttgaacttgtctactggcataaacacttgtgagattgtttgagagagcttatgaaaataacttatgacttgtccata 4034029  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #13
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 38 - 85
Target Start/End: Complemental strand, 15579586 - 15579539
Alignment:
Q  38 aagactgtttgagagagcttatggaaataacttatgacatgtccataa 85  Q
    ||||||||||| |||||||| |||||| ||||||||||||||||||||    
T  15579586 aagactgtttgggagagcttgtggaaacaacttatgacatgtccataa 15579539  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #14
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 1 - 60
Target Start/End: Complemental strand, 27807256 - 27807197
Alignment:
Q  1 gacttatttgagcttatctactgagataagcacatataagactgtttgagagagcttatg 60  Q
    ||||||||||| ||| |||||||| |||||||  | ||||||||||||||||||||||||    
T  27807256 gacttatttgaacttttctactgacataagcatttgtaagactgtttgagagagcttatg 27807197  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #15
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 3 - 126
Target Start/End: Original strand, 31517671 - 31517794
Alignment:
Q  3 cttatttgagcttatctactgagataagcacatataagactgtttgagagagcttatggaaataacttatgacatgtccataaactattttcaaatgatt 102  Q
    ||||||||||||||| |||||  |||||||| | | |||||||||| |||| |||||  ||| |||| ||||||||| ||||| || ||||||  | |||    
T  31517671 cttatttgagcttatttactggcataagcacttgtgagactgtttgggagaacttatcaaaacaactcatgacatgttcataagctgttttcagcttatt 31517770  T
Q  103 tccataagcacttcaagatagatt 126  Q
    | ||||||| || ||||| |||||    
T  31517771 ttcataagctctccaagacagatt 31517794  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #16
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 1 - 123
Target Start/End: Original strand, 12564428 - 12564550
Alignment:
Q  1 gacttatttgagcttatctactgagataagcacatataagactgtttgagagagcttatggaaataacttatgacatgtccataaactattttcaaatga 100  Q
    ||||||||||||||||| |||||| |||||||| | |  ||||||||| ||||||||| | | ||| ||||||||| ||| ||||  | ||||||  | |    
T  12564428 gacttatttgagcttatatactgatataagcacttgtgtgactgtttgggagagcttacgtatatagcttatgacaagtcaataagttgttttcagctta 12564527  T
Q  101 tttccataagcacttcaagatag 123  Q
    ||||||||||  || ||||||||    
T  12564528 tttccataagttctccaagatag 12564550  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #17
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 1 - 79
Target Start/End: Complemental strand, 28467574 - 28467496
Alignment:
Q  1 gacttatttgagcttatctactgagataagcacatataagactgtttgagagagcttatggaaataacttatgacatgt 79  Q
    |||||||||||| |||| ||||   || ||||| ||| ||||| |||| ||||| ||||||||||||||||||||||||    
T  28467574 gacttatttgagtttatttactagcattagcacttatgagactatttgggagagattatggaaataacttatgacatgt 28467496  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #18
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 3 - 85
Target Start/End: Complemental strand, 43420397 - 43420315
Alignment:
Q  3 cttatttgagcttatctactgagataagcacatataagactgtttgagagagcttatggaaataacttatgacatgtccataa 85  Q
    ||||||||||||||||||| || |||| ||| | | |||||| ||| |||| |||||||||| | |||||||||||| |||||    
T  43420397 cttatttgagcttatctacagacataaacacttgtgagactgcttgtgagatcttatggaaacagcttatgacatgttcataa 43420315  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #19
Raw Score: 34; E-Value: 0.0000000007
Query Start/End: Original strand, 4 - 93
Target Start/End: Original strand, 14737658 - 14737747
Alignment:
Q  4 ttatttgagcttatctactgagataagcacatataagactgtttgagagagcttatggaaataacttatgacatgtccataaactatttt 93  Q
    |||||||||||||| ||||   |||||||| | | |||||||||| || | ||| || ||||||||||| |||||||||||| |||||||    
T  14737658 ttatttgagcttatttactagaataagcacttgtgagactgtttgggaaaacttgtgaaaataacttataacatgtccataagctatttt 14737747  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #20
Raw Score: 34; E-Value: 0.0000000007
Query Start/End: Original strand, 49 - 90
Target Start/End: Original strand, 17631079 - 17631120
Alignment:
Q  49 agagagcttatggaaataacttatgacatgtccataaactat 90  Q
    |||||||||||||||| |||||||||||||||||||| ||||    
T  17631079 agagagcttatggaaacaacttatgacatgtccataagctat 17631120  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #21
Raw Score: 34; E-Value: 0.0000000007
Query Start/End: Original strand, 39 - 84
Target Start/End: Complemental strand, 23407534 - 23407489
Alignment:
Q  39 agactgtttgagagagcttatggaaataacttatgacatgtccata 84  Q
    ||||||| ||||||||||||| |||||| |||||||||||||||||    
T  23407534 agactgtctgagagagcttattgaaatagcttatgacatgtccata 23407489  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #22
Raw Score: 34; E-Value: 0.0000000007
Query Start/End: Original strand, 4 - 77
Target Start/End: Complemental strand, 26679492 - 26679419
Alignment:
Q  4 ttatttgagcttatctactgagataagcacatataagactgtttgagagagcttatggaaataacttatgacat 77  Q
    ||||||||||||||||||||  || |||||   |||||| ||||| ||||||||||||||| | ||||||||||    
T  26679492 ttatttgagcttatctactgtcattagcactggtaagacagtttgcgagagcttatggaaaaatcttatgacat 26679419  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #23
Raw Score: 34; E-Value: 0.0000000007
Query Start/End: Original strand, 1 - 114
Target Start/End: Complemental strand, 29723630 - 29723517
Alignment:
Q  1 gacttatttgagcttatctactgagataagcacatataagactgtttgagagagcttatggaaataacttatgacatgtccataaactattttcaaatga 100  Q
    |||| |||||||||||| ||||   |||||||| | | | || |||||| ||| || ||||||| | ||||||||||||||||||||| ||||||| | |    
T  29723630 gactaatttgagcttatttactagcataagcacttgtgatacagtttgaaagaactaatggaaacagcttatgacatgtccataaactgttttcaactta 29723531  T
Q  101 tttccataagcact 114  Q
    ||| ||||| ||||    
T  29723530 tttacataaccact 29723517  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #24
Raw Score: 34; E-Value: 0.0000000007
Query Start/End: Original strand, 17 - 122
Target Start/End: Original strand, 44031944 - 44032049
Alignment:
Q  17 tctactgagataagcacatataagactgtttgagagagcttatggaaataacttatgacatgtccataaactattttcaaatgatttccataagcacttc 116  Q
    |||||||  |||||||| | | ||||||| |  ||||||||||| ||  | || ||||||||||||||| |||||||||  | |||||||||||| ||||    
T  44031944 tctactgtcataagcacttgttagactgtctaggagagcttatgtaagcagctaatgacatgtccataagctattttcagctaatttccataagctcttc 44032043  T
Q  117 aagata 122  Q
    ||||||    
T  44032044 aagata 44032049  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #25
Raw Score: 34; E-Value: 0.0000000007
Query Start/End: Original strand, 2 - 95
Target Start/End: Complemental strand, 45327720 - 45327627
Alignment:
Q  2 acttatttgagcttatctactgagataagcacatataagactgtttgagagagcttatggaaataacttatgacatgtccataaactattttca 95  Q
    ||||||| ||||||||||||||  |  ||||| | | |||||  ||| | ||||||||||||| ||||||||||||||||||||| | ||||||    
T  45327720 acttattggagcttatctactggcacgagcacttgtgagactagttgggggagcttatggaaacaacttatgacatgtccataaattgttttca 45327627  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #26
Raw Score: 34; E-Value: 0.0000000007
Query Start/End: Original strand, 39 - 84
Target Start/End: Original strand, 49692019 - 49692064
Alignment:
Q  39 agactgtttgagagagcttatggaaataacttatgacatgtccata 84  Q
    ||||||||||||||| |||||| ||||| |||||||||||||||||    
T  49692019 agactgtttgagagaacttatgaaaatagcttatgacatgtccata 49692064  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #27
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 1 - 85
Target Start/End: Original strand, 10199337 - 10199421
Alignment:
Q  1 gacttatttgagcttatctactgagataagcacatataagactgtttgagagagcttatggaaataacttatgacatgtccataa 85  Q
    |||||||||||||||||||||| | |||||||| | | | ||| |||| |||| || ||| ||||| |||||||||||| |||||    
T  10199337 gacttatttgagcttatctactaacataagcacttgtgacactatttgggagaactcatgaaaatagcttatgacatgttcataa 10199421  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #28
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 2 - 95
Target Start/End: Complemental strand, 17628735 - 17628646
Alignment:
Q  2 acttatttgagcttatctactgagataagcacatataagactgtttgagagagcttatggaaataacttatgacatgtccataaactattttca 95  Q
    ||||||| ||||||| ||||||| | |||||| | | |||||||| |||    |||||||||| |||||||||||||||||||| || ||||||    
T  17628735 acttattggagcttacctactgacacaagcacttgtgagactgttggag----cttatggaaacaacttatgacatgtccataagctgttttca 17628646  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #29
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 1 - 85
Target Start/End: Complemental strand, 27140619 - 27140535
Alignment:
Q  1 gacttatttgagcttatctactgagataagcacatataagactgtttgagagagcttatggaaataacttatgacatgtccataa 85  Q
    ||||||| |||||||||||| ||| |||| ||  | |||| || |||||||||| ||| ||||| | ||||||||||||||||||    
T  27140619 gacttatatgagcttatctattgacataaacaattgtaagtctctttgagagagtttaaggaaacagcttatgacatgtccataa 27140535  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #30
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 1 - 77
Target Start/End: Original strand, 51929391 - 51929467
Alignment:
Q  1 gacttatttgagcttatctactgagataagcacatataagactgtttgagagagcttatggaaataacttatgacat 77  Q
    ||||| |||||||||||||||||| |||||||| | | | ||||||| ||||| |||||| ||| | ||||||||||    
T  51929391 gacttttttgagcttatctactgacataagcacctgtgacactgtttaagagaacttatgaaaacagcttatgacat 51929467  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #31
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 4 - 111
Target Start/End: Complemental strand, 4868537 - 4868431
Alignment:
Q  4 ttatttgagcttatctactgagataagcacatataagactgtttgagagagcttatggaaataacttatgacatgtccataaactattttcaaatgattt 103  Q
    ||||||||  ||||||| ||| ||| |||| | | |||||||||||||||| |||| |||| ||||||||||||||| ||||  | ||||||| | ||||    
T  4868537 ttatttgaatttatctattgacataggcacttgtgagactgtttgagagagtttat-gaaacaacttatgacatgtcaataagttgttttcaacttattt 4868439  T
Q  104 ccataagc 111  Q
     |||||||    
T  4868438 acataagc 4868431  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #32
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 1 - 64
Target Start/End: Complemental strand, 6279540 - 6279477
Alignment:
Q  1 gacttatttgagcttatctactgagataagcacatataagactgtttgagagagcttatggaaa 64  Q
    ||||||||| |||||| ||||||| |||||||| | |  | |||||||||||||||||||||||    
T  6279540 gacttatttcagcttaactactgacataagcacttgtgtggctgtttgagagagcttatggaaa 6279477  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #33
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 48 - 111
Target Start/End: Complemental strand, 15515635 - 15515572
Alignment:
Q  48 gagagagcttatggaaataacttatgacatgtccataaactattttcaaatgatttccataagc 111  Q
    ||||||| ||||| ||| ||||||||||||||| |||  |||||||||| | ||||||||||||    
T  15515635 gagagagtttatgaaaacaacttatgacatgtcaatacgctattttcaatttatttccataagc 15515572  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #34
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 1 - 88
Target Start/End: Complemental strand, 16980944 - 16980857
Alignment:
Q  1 gacttatttgagcttatctactgagataagcacatataagactgtttgagagagcttatggaaataacttatgacatgtccataaact 88  Q
    ||||||||||| ||||| |||  | ||||| || | | ||||| |||||||||||||||||||| |||||| ||||| | ||||||||    
T  16980944 gacttatttgaacttatataccaacataagtacttgtgagactatttgagagagcttatggaaacaacttacgacattttcataaact 16980857  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #35
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 1 - 84
Target Start/End: Complemental strand, 34536299 - 34536216
Alignment:
Q  1 gacttatttgagcttatctactgagataagcacatataagactgtttgagagagcttatggaaataacttatgacatgtccata 84  Q
    ||||||||||| | |||||| ||| |||| ||| | | |||||||||||||  ||||||| ||| | |||||||||||||||||    
T  34536299 gacttatttgaacgtatctattgacataaacacttgtgagactgtttgagatggcttatgaaaacagcttatgacatgtccata 34536216  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #36
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 42 - 85
Target Start/End: Original strand, 37941955 - 37941998
Alignment:
Q  42 ctgtttgagagagcttatggaaataacttatgacatgtccataa 85  Q
    |||||||||||||||||| |||| || |||||||||||||||||    
T  37941955 ctgtttgagagagcttatagaaacaatttatgacatgtccataa 37941998  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #37
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 153 - 192
Target Start/End: Complemental strand, 45234187 - 45234148
Alignment:
Q  153 aaaataacttgactttattttatgttttattatagaaata 192  Q
    ||||||| ||||||||||||||| ||||||||||||||||    
T  45234187 aaaataatttgactttattttatcttttattatagaaata 45234148  T

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Target: chr1; HSP #38
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 43 - 86
Target Start/End: Original strand, 49521776 - 49521819
Alignment:
Q  43 tgtttgagagagcttatggaaataacttatgacatgtccataaa 86  Q
    ||||||||||||||| |||||| |||||||||||||| ||||||    
T  49521776 tgtttgagagagcttgtggaaacaacttatgacatgttcataaa 49521819  T

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Target: chr1; HSP #39
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 1 - 123
Target Start/End: Original strand, 37593613 - 37593735
Alignment:
Q  1 gacttatttgagcttatctactgagataagcacatataagactgtttgagagagcttatggaaataacttatgacatgtccataaactattttcaaatga 100  Q
    ||||||||||||||||| |||||  |||| ||| | | |||||||||| || | || ||| | | |||||||||||||| ||||| || ||||||  | |    
T  37593613 gacttatttgagcttatatactggcataaacacttgttagactgtttgggaaaactaatgaacacaacttatgacatgttcataagctgttttcagctta 37593712  T
Q  101 tttccataagcacttcaagatag 123  Q
    ||| ||||||| |||||| ||||    
T  37593713 ttttcataagctcttcaaaatag 37593735  T

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Target: chr1; HSP #40
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 41 - 107
Target Start/End: Complemental strand, 37811953 - 37811887
Alignment:
Q  41 actgtttgagagagcttatggaaataacttatgacatgtccataaactattttcaaatgatttccat 107  Q
    |||| |||||||| |||||| ||| | |||||||||||| |||||||| ||||||| | ||||||||    
T  37811953 actggttgagagaacttatgaaaacagcttatgacatgttcataaactgttttcaacttatttccat 37811887  T

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Target: chr1; HSP #41
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 1 - 74
Target Start/End: Complemental strand, 5157213 - 5157140
Alignment:
Q  1 gacttatttgagcttatctactgagataagcacatataagactgtttgagagagcttatggaaataacttatga 74  Q
    ||||||||||| ||||||||| || |||| ||| | | | |||||||| |||||||||| |||| |||||||||    
T  5157213 gacttatttgaacttatctacggacataaacacttgtgaaactgtttgggagagcttatagaaacaacttatga 5157140  T

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Target: chr1; HSP #42
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 50 - 95
Target Start/End: Complemental strand, 27145634 - 27145589
Alignment:
Q  50 gagagcttatggaaataacttatgacatgtccataaactattttca 95  Q
    ||||||||||||||| | ||||||||||||||||||  ||||||||    
T  27145634 gagagcttatggaaaaagcttatgacatgtccataagttattttca 27145589  T

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Target: chr1; HSP #43
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 153 - 194
Target Start/End: Complemental strand, 50319282 - 50319241
Alignment:
Q  153 aaaataacttgactttattttatgttttattatagaaatagc 194  Q
    |||| |||||||||||||||||| |||| |||||||||||||    
T  50319282 aaaacaacttgactttattttatcttttgttatagaaatagc 50319241  T

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Target: chr1; HSP #44
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 51 - 111
Target Start/End: Complemental strand, 6262111 - 6262051
Alignment:
Q  51 agagcttatggaaataacttatgacatgtccataaactattttcaaatgatttccataagc 111  Q
    ||||||||||  || |||||||||||||| ||||| |||||||||| | ||||||| ||||    
T  6262111 agagcttatgagaacaacttatgacatgttcataagctattttcaacttatttccacaagc 6262051  T

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Target: chr1; HSP #45
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 45 - 85
Target Start/End: Complemental strand, 6262835 - 6262795
Alignment:
Q  45 tttgagagagcttatggaaataacttatgacatgtccataa 85  Q
    |||| ||||||||||| ||||||||||||| ||||||||||    
T  6262835 tttgggagagcttatgaaaataacttatgatatgtccataa 6262795  T

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Target: chr1; HSP #46
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 1 - 33
Target Start/End: Complemental strand, 6292633 - 6292601
Alignment:
Q  1 gacttatttgagcttatctactgagataagcac 33  Q
    |||||||||||||||||||||||| ||||||||    
T  6292633 gacttatttgagcttatctactgacataagcac 6292601  T

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Target: chr1; HSP #47
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 3 - 79
Target Start/End: Complemental strand, 15709988 - 15709912
Alignment:
Q  3 cttatttgagcttatctactgagataagcacatataagactgtttgagagagcttatggaaataacttatgacatgt 79  Q
    |||| ||||| |||||||||   |||||||| | | |||||||||| |||| |||| ||||||| ||||||||||||    
T  15709988 cttacttgaggttatctactagcataagcacttttgagactgtttgggagaacttacggaaatagcttatgacatgt 15709912  T

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Target: chr1; HSP #48
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 51 - 107
Target Start/End: Complemental strand, 17420294 - 17420238
Alignment:
Q  51 agagcttatggaaataacttatgacatgtccataaactattttcaaatgatttccat 107  Q
    |||||||||| ||| ||||||| ||||||||||||| | ||||||| | ||||||||    
T  17420294 agagcttatgaaaacaacttattacatgtccataaattgttttcaacttatttccat 17420238  T

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Target: chr1; HSP #49
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 49 - 85
Target Start/End: Original strand, 19412574 - 19412610
Alignment:
Q  49 agagagcttatggaaataacttatgacatgtccataa 85  Q
    |||||| ||||||||| ||||||||||||||||||||    
T  19412574 agagagtttatggaaacaacttatgacatgtccataa 19412610  T

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Target: chr1; HSP #50
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 51 - 95
Target Start/End: Complemental strand, 27146012 - 27145968
Alignment:
Q  51 agagcttatggaaataacttatgacatgtccataaactattttca 95  Q
    |||||||||||||| | ||||||||||||||||||  ||||||||    
T  27146012 agagcttatggaaacagcttatgacatgtccataagttattttca 27145968  T

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Target: chr1; HSP #51
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 1 - 85
Target Start/End: Complemental strand, 28075845 - 28075761
Alignment:
Q  1 gacttatttgagcttatctactgagataagcacatataagactgtttgagagagcttatggaaataacttatgacatgtccataa 85  Q
    |||||||||||||||||||||| | ||||| || | | || |||||||||  | ||| || ||| |||||||||| |||||||||    
T  28075845 gacttatttgagcttatctactaatataagaacttgtgaggctgtttgagttaacttgtgaaaacaacttatgacgtgtccataa 28075761  T

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Target: chr1; HSP #52
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 46 - 94
Target Start/End: Complemental strand, 43771933 - 43771885
Alignment:
Q  46 ttgagagagcttatggaaataacttatgacatgtccataaactattttc 94  Q
    ||||||||||| ||||||| || ||||||||||||| |||||| |||||    
T  43771933 ttgagagagctcatggaaacaatttatgacatgtccgtaaactgttttc 43771885  T

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Target: chr1; HSP #53
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 1 - 84
Target Start/End: Complemental strand, 48282263 - 48282182
Alignment:
Q  1 gacttatttgagcttatctactgagataagcacatataagactgtttgagagagcttatggaaataacttatgacatgtccata 84  Q
    |||| ||||||||||| ||||||  ||||| || | | |||||  ||||||||||||||| |||||  ||||||||||||||||    
T  48282263 gactaatttgagcttacctactggcataagtacctgtgagact--ttgagagagcttatgaaaataggttatgacatgtccata 48282182  T

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Target: scaffold0024 (Bit Score: 36; Significance: 0.00000000004; HSPs: 1)
Name: scaffold0024
Description:

Target: scaffold0024; HSP #1
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 7 - 78
Target Start/End: Complemental strand, 27711 - 27640
Alignment:
Q  7 tttgagcttatctactgagataagcacatataagactgtttgagagagcttatggaaataacttatgacatg 78  Q
    |||||||| ||||||||| ||| | || | | |||||||||| ||||||||||||||||| |||||||||||    
T  27711 tttgagctgatctactgacatatgtacttctgagactgtttgggagagcttatggaaatagcttatgacatg 27640  T

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Target: scaffold0110 (Bit Score: 31; Significance: 0.00000004; HSPs: 1)
Name: scaffold0110
Description:

Target: scaffold0110; HSP #1
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 3 - 73
Target Start/End: Original strand, 4154 - 4224
Alignment:
Q  3 cttatttgagcttatctactgagataagcacatataagactgtttgagagagcttatggaaataacttatg 73  Q
    ||||||||||||| |||||||| |||||||| | | ||  |||||| ||||| ||||||||| ||||||||    
T  4154 cttatttgagcttgtctactgacataagcacttgtgagcttgtttgtgagagtttatggaaacaacttatg 4224  T

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Target: scaffold0311 (Bit Score: 30; Significance: 0.0000002; HSPs: 1)
Name: scaffold0311
Description:

Target: scaffold0311; HSP #1
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 14 - 119
Target Start/End: Original strand, 10559 - 10664
Alignment:
Q  14 ttatctactgagataagcacatataagactgtttgagagagcttatggaaataacttatgacatgtccataaactattttcaaatgatttccataagcac 113  Q
    |||| |||||| ||||| || | | ||||||||||| | |||||||| ||| |||| |||||||||||||||  | ||||||  | |||||||||| |||    
T  10559 ttatgtactgacataagtacttgtgagactgtttgacaaagcttatgtaaacaactaatgacatgtccataagttgttttcagcttatttccataaacac 10658  T
Q  114 ttcaag 119  Q
    | ||||    
T  10659 tacaag 10664  T

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Target: scaffold0012 (Bit Score: 30; Significance: 0.0000002; HSPs: 1)
Name: scaffold0012
Description:

Target: scaffold0012; HSP #1
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 56 - 85
Target Start/End: Complemental strand, 38678 - 38649
Alignment:
Q  56 ttatggaaataacttatgacatgtccataa 85  Q
    ||||||||||||||||||||||||||||||    
T  38678 ttatggaaataacttatgacatgtccataa 38649  T

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