View Alignment

This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.

Legend
 Query
 Query hiting target  Query hiting target's complemental strand
 Query's complemental strand hiting target  Query's complemental strand hiting target's complemental strand

Alignment Overview

Query: NF14614_low_21 (Length: 426)

Name: NF14614_low_21
Description: NF14614
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)


[»] NF14614_low_21
NF14614_low_21
[»] chr1 (37 HSPs)
chr1 (82-272)||(34006404-34006594)
chr1 (82-317)||(41584447-41584680)
chr1 (82-315)||(52744627-52744858)
chr1 (82-313)||(45046636-45046865)
chr1 (82-317)||(40907716-40907949)
chr1 (85-316)||(27794978-27795206)
chr1 (85-261)||(7011357-7011532)
chr1 (82-269)||(26723317-26723503)
chr1 (82-317)||(42546111-42546344)
chr1 (82-317)||(18583326-18583559)
chr1 (82-293)||(23442882-23443091)
chr1 (82-253)||(45567735-45567905)
chr1 (82-271)||(49786412-49786600)
chr1 (82-317)||(28866412-28866645)
chr1 (76-313)||(6223539-6223767)
chr1 (82-272)||(33611236-33611425)
chr1 (82-242)||(49677627-49677786)
chr1 (96-317)||(38885371-38885590)
chr1 (82-254)||(15069686-15069856)
chr1 (82-232)||(17000522-17000672)
chr1 (82-317)||(24472610-24472842)
chr1 (82-271)||(44572927-44573112)
chr1 (82-270)||(3561163-3561350)
chr1 (82-213)||(40650560-40650690)
chr1 (82-228)||(34162591-34162737)
chr1 (82-240)||(25563272-25563429)
chr1 (112-255)||(45879948-45880095)
chr1 (112-228)||(42929057-42929173)
chr1 (82-152)||(32817557-32817626)
chr1 (112-235)||(5284182-5284306)
chr1 (82-145)||(43318933-43318995)
chr1 (152-213)||(890738-890799)
chr1 (82-145)||(800545-800607)
chr1 (82-145)||(8364152-8364213)
chr1 (82-145)||(9445839-9445901)
chr1 (115-157)||(38159001-38159043)
chr1 (186-272)||(8704344-8704431)
[»] chr8 (37 HSPs)
chr8 (82-317)||(8885234-8885468)
chr8 (82-317)||(34853472-34853705)
chr8 (85-317)||(11698098-11698328)
chr8 (82-317)||(42280673-42280906)
chr8 (82-317)||(3094829-3095062)
chr8 (82-315)||(14163841-14164072)
chr8 (82-252)||(27927787-27927956)
chr8 (82-257)||(36165678-36165853)
chr8 (82-293)||(40328041-40328251)
chr8 (82-317)||(36980713-36980946)
chr8 (82-250)||(9073648-9073815)
chr8 (76-272)||(17119705-17119900)
chr8 (82-271)||(28916919-28917107)
chr8 (82-272)||(31519718-31519907)
chr8 (82-261)||(44106367-44106545)
chr8 (82-271)||(28423565-28423753)
chr8 (82-315)||(6395228-6395459)
chr8 (82-250)||(21004528-21004695)
chr8 (82-271)||(36317940-36318128)
chr8 (82-213)||(40392680-40392810)
chr8 (82-272)||(34645521-34645713)
chr8 (109-269)||(1076725-1076883)
chr8 (82-207)||(4259528-4259650)
chr8 (82-314)||(7981658-7981890)
chr8 (109-262)||(10840589-10840746)
chr8 (82-145)||(33472215-33472277)
chr8 (82-145)||(10833468-10833530)
chr8 (82-145)||(33472422-33472484)
chr8 (82-132)||(9845330-9845379)
chr8 (148-213)||(8621522-8621587)
chr8 (82-135)||(31234481-31234533)
chr8 (82-134)||(16310743-16310794)
chr8 (82-134)||(37248702-37248753)
chr8 (82-130)||(40994936-40994983)
chr8 (76-126)||(24627712-24627761)
chr8 (82-272)||(1374084-1374277)
chr8 (82-126)||(41530819-41530862)
[»] chr5 (50 HSPs)
chr5 (82-317)||(32841753-32841986)
chr5 (82-317)||(31928907-31929139)
chr5 (76-317)||(37183563-37183802)
chr5 (82-317)||(6156837-6157070)
chr5 (82-315)||(31221123-31221354)
chr5 (111-314)||(26898588-26898790)
chr5 (82-272)||(20891719-20891907)
chr5 (76-317)||(14111967-14112204)
chr5 (82-272)||(38871777-38871966)
chr5 (82-270)||(33487716-33487904)
chr5 (82-315)||(39524882-39525113)
chr5 (76-317)||(7884293-7884533)
chr5 (82-271)||(15957855-15958043)
chr5 (82-314)||(38692567-38692798)
chr5 (82-268)||(15799331-15799516)
chr5 (82-261)||(28083215-28083393)
chr5 (78-317)||(40619767-40620009)
chr5 (107-316)||(27212834-27213041)
chr5 (82-271)||(24203510-24203699)
chr5 (82-315)||(12464902-12465134)
chr5 (82-272)||(38372415-38372596)
chr5 (82-232)||(4064585-4064735)
chr5 (82-232)||(29862718-29862868)
chr5 (82-272)||(13908654-13908847)
chr5 (155-317)||(26190104-26190265)
chr5 (82-240)||(23269443-23269600)
chr5 (82-247)||(26095198-26095363)
chr5 (86-317)||(27158194-27158423)
chr5 (82-271)||(40613502-40613690)
chr5 (86-231)||(6800794-6800938)
chr5 (82-235)||(12847549-12847701)
chr5 (82-317)||(21070472-21070704)
chr5 (85-317)||(26093555-26093798)
chr5 (112-315)||(33901094-33901300)
chr5 (112-228)||(18514937-18515053)
chr5 (112-231)||(26622247-26622364)
chr5 (82-135)||(8738948-8739000)
chr5 (82-145)||(34530321-34530383)
chr5 (82-135)||(8739151-8739203)
chr5 (82-145)||(8973562-8973624)
chr5 (112-317)||(11185969-11186161)
chr5 (82-145)||(27493902-27493964)
chr5 (82-128)||(27494123-27494168)
chr5 (179-272)||(31561646-31561739)
chr5 (112-213)||(41253435-41253536)
chr5 (82-138)||(4650201-4650256)
chr5 (82-145)||(28445162-28445224)
chr5 (109-203)||(41639385-41639482)
chr5 (82-122)||(28445381-28445420)
chr5 (82-126)||(38641040-38641083)
[»] chr3 (49 HSPs)
chr3 (85-317)||(51258550-51258781)
chr3 (82-317)||(35142218-35142450)
chr3 (82-315)||(50716396-50716628)
chr3 (82-315)||(50796219-50796451)
chr3 (82-313)||(3351852-3352081)
chr3 (82-252)||(49096072-49096242)
chr3 (82-313)||(28873149-28873379)
chr3 (82-270)||(38977576-38977763)
chr3 (82-317)||(34821125-34821358)
chr3 (82-272)||(39149953-39150142)
chr3 (86-317)||(46622577-46622806)
chr3 (82-293)||(43472774-43472984)
chr3 (82-317)||(2358404-2358637)
chr3 (114-293)||(3938357-3938535)
chr3 (82-317)||(47302164-47302396)
chr3 (82-270)||(52777375-52777562)
chr3 (82-293)||(3902612-3902821)
chr3 (82-236)||(47123170-47123323)
chr3 (82-269)||(35345738-35345924)
chr3 (82-236)||(47130536-47130689)
chr3 (82-270)||(47739761-47739947)
chr3 (82-208)||(501031-501156)
chr3 (109-235)||(30721674-30721799)
chr3 (82-317)||(51540409-51540629)
chr3 (112-315)||(40062552-40062755)
chr3 (76-231)||(46624858-46625012)
chr3 (109-271)||(51492969-51493137)
chr3 (141-235)||(33439383-33439477)
chr3 (181-316)||(4394221-4394355)
chr3 (76-315)||(14828700-14828940)
chr3 (112-293)||(51816387-51816567)
chr3 (111-317)||(29048514-29048707)
chr3 (82-206)||(5127791-5127914)
chr3 (82-146)||(33438665-33438728)
chr3 (112-231)||(54229764-54229883)
chr3 (82-164)||(29035943-29036024)
chr3 (112-272)||(50384298-50384462)
chr3 (109-228)||(4300150-4300269)
chr3 (82-213)||(47769406-47769536)
chr3 (112-207)||(43472159-43472255)
chr3 (82-145)||(8735537-8735599)
chr3 (82-145)||(9087778-9087840)
chr3 (85-133)||(26053485-26053533)
chr3 (82-145)||(33842027-33842089)
chr3 (230-311)||(34009882-34009962)
chr3 (85-134)||(47979970-47980018)
chr3 (187-215)||(147512-147540)
chr3 (159-235)||(11266451-11266526)
chr3 (82-126)||(45244534-45244577)
[»] chr4 (55 HSPs)
chr4 (82-313)||(8106545-8106775)
chr4 (82-317)||(19835672-19835905)
chr4 (109-315)||(54631276-54631481)
chr4 (82-271)||(27741940-27742129)
chr4 (82-317)||(25752225-25752459)
chr4 (82-293)||(2505837-2506046)
chr4 (82-317)||(48318846-48319079)
chr4 (82-317)||(40703816-40704049)
chr4 (82-317)||(53893808-53894040)
chr4 (82-271)||(32441962-32442150)
chr4 (82-314)||(7931809-7932038)
chr4 (82-269)||(25491224-25491410)
chr4 (82-271)||(17932964-17933152)
chr4 (82-317)||(38536322-38536556)
chr4 (84-317)||(6228595-6228826)
chr4 (82-314)||(25538763-25538994)
chr4 (82-314)||(46440057-46440289)
chr4 (82-272)||(52089337-52089526)
chr4 (93-293)||(6003479-6003677)
chr4 (126-314)||(29822775-29822962)
chr4 (109-271)||(49397190-49397351)
chr4 (82-317)||(34973016-34973249)
chr4 (82-317)||(31582212-31582437)
chr4 (82-234)||(41412962-41413113)
chr4 (82-272)||(41322918-41323107)
chr4 (133-313)||(49001341-49001525)
chr4 (82-232)||(55052484-55052634)
chr4 (112-271)||(47456781-47456945)
chr4 (82-271)||(3703082-3703264)
chr4 (82-235)||(14474075-14474226)
chr4 (160-315)||(38417021-38417174)
chr4 (181-316)||(18050972-18051106)
chr4 (112-270)||(48095690-48095853)
chr4 (82-212)||(7863593-7863722)
chr4 (85-272)||(372074-372262)
chr4 (218-308)||(52089541-52089630)
chr4 (85-162)||(47873965-47874041)
chr4 (129-231)||(37222159-37222260)
chr4 (82-272)||(47784141-47784326)
chr4 (222-317)||(23524078-23524172)
chr4 (82-135)||(25140469-25140521)
chr4 (78-175)||(27879696-27879792)
chr4 (112-203)||(1788175-1788269)
chr4 (151-208)||(4936618-4936675)
chr4 (112-213)||(20078729-20078830)
chr4 (82-135)||(25140678-25140730)
chr4 (82-223)||(55138023-55138163)
chr4 (82-126)||(25140894-25140937)
chr4 (112-228)||(55838862-55838978)
chr4 (82-145)||(27181474-27181535)
chr4 (112-187)||(46381079-46381154)
chr4 (190-253)||(51515815-51515877)
chr4 (112-157)||(42497817-42497862)
chr4 (77-177)||(37769981-37770080)
chr4 (82-138)||(42660335-42660390)
[»] chr7 (40 HSPs)
chr7 (78-272)||(19818520-19818713)
chr7 (82-317)||(42925422-42925656)
chr7 (76-317)||(42864883-42865123)
chr7 (82-313)||(19225384-19225613)
chr7 (111-272)||(36629375-36629536)
chr7 (82-317)||(36468321-36468552)
chr7 (89-317)||(43737233-43737459)
chr7 (82-317)||(9151940-9152168)
chr7 (85-317)||(31985299-31985529)
chr7 (109-272)||(33151373-33151535)
chr7 (82-317)||(8155043-8155276)
chr7 (82-273)||(24690161-24690349)
chr7 (109-317)||(31643211-31643417)
chr7 (82-243)||(36408515-36408675)
chr7 (148-317)||(37518045-37518213)
chr7 (82-315)||(3304535-3304773)
chr7 (82-317)||(47202638-47202864)
chr7 (82-237)||(3936252-3936407)
chr7 (109-272)||(7115095-7115259)
chr7 (76-313)||(36946078-36946312)
chr7 (82-313)||(1518851-1519087)
chr7 (127-243)||(26555012-26555128)
chr7 (109-317)||(33573830-33574032)
chr7 (112-271)||(37398714-37398877)
chr7 (82-187)||(28230379-28230483)
chr7 (82-317)||(24041979-24042203)
chr7 (82-317)||(6466919-6467155)
chr7 (82-176)||(5278408-5278501)
chr7 (112-317)||(48705781-48705985)
chr7 (82-158)||(37518235-37518310)
chr7 (113-198)||(39581913-39581998)
chr7 (86-145)||(8214243-8214301)
chr7 (85-213)||(48776094-48776223)
chr7 (82-167)||(16983673-16983757)
chr7 (188-272)||(43186030-43186118)
chr7 (82-135)||(8214464-8214516)
chr7 (78-134)||(48775748-48775803)
chr7 (222-272)||(18322248-18322298)
chr7 (165-231)||(47239556-47239622)
chr7 (76-145)||(16278244-16278312)
[»] chr6 (28 HSPs)
chr6 (82-317)||(4508084-4508317)
chr6 (76-317)||(21514813-21515052)
chr6 (82-314)||(2539595-2539825)
chr6 (82-270)||(24604189-24604376)
chr6 (83-293)||(3717088-3717297)
chr6 (85-317)||(2813004-2813237)
chr6 (86-272)||(17264558-17264742)
chr6 (76-234)||(5699703-5699861)
chr6 (82-213)||(9905258-9905389)
chr6 (82-232)||(23406940-23407090)
chr6 (109-311)||(5639032-5639232)
chr6 (82-272)||(14587387-14587575)
chr6 (82-268)||(34528584-34528768)
chr6 (82-243)||(29519423-29519583)
chr6 (82-231)||(13800894-13801042)
chr6 (82-231)||(16450358-16450506)
chr6 (82-205)||(1945423-1945545)
chr6 (93-195)||(32044537-32044638)
chr6 (109-224)||(29289499-29289614)
chr6 (156-271)||(7412967-7413082)
chr6 (109-203)||(7734221-7734315)
chr6 (112-253)||(14037810-14037948)
chr6 (109-213)||(6704012-6704115)
chr6 (82-315)||(236938-237173)
chr6 (112-213)||(3365838-3365939)
chr6 (112-175)||(4893314-4893377)
chr6 (181-226)||(33413358-33413403)
chr6 (89-213)||(10310316-10310439)
[»] chr2 (39 HSPs)
chr2 (76-251)||(32187711-32187885)
chr2 (82-314)||(5507563-5507794)
chr2 (85-317)||(42894524-42894754)
chr2 (82-317)||(25217551-25217785)
chr2 (84-272)||(34517247-34517436)
chr2 (82-316)||(41510207-41510438)
chr2 (82-317)||(41202966-41203196)
chr2 (82-317)||(33452219-33452453)
chr2 (82-317)||(44465517-44465737)
chr2 (109-317)||(41854680-41854888)
chr2 (85-316)||(38308610-38308840)
chr2 (76-251)||(16750271-16750444)
chr2 (87-317)||(30763798-30764027)
chr2 (82-315)||(39447306-39447532)
chr2 (127-317)||(38065354-38065543)
chr2 (82-317)||(15994896-15995123)
chr2 (82-271)||(19109835-19110025)
chr2 (82-260)||(36875129-36875305)
chr2 (112-271)||(42478916-42479075)
chr2 (82-317)||(17474575-17474809)
chr2 (82-271)||(35251074-35251264)
chr2 (166-317)||(27670723-27670873)
chr2 (109-235)||(8388821-8388947)
chr2 (82-176)||(45153708-45153801)
chr2 (112-229)||(45293813-45293930)
chr2 (112-272)||(26228239-26228404)
chr2 (22-83)||(18506759-18506820)
chr2 (22-83)||(18513257-18513318)
chr2 (82-293)||(37773616-37773826)
chr2 (109-187)||(36948851-36948929)
chr2 (22-83)||(18486908-18486969)
chr2 (82-273)||(32069059-32069248)
chr2 (111-313)||(33440291-33440491)
chr2 (82-145)||(17766777-17766839)
chr2 (112-228)||(41204105-41204221)
chr2 (82-145)||(34519485-34519547)
chr2 (137-213)||(13704692-13704768)
chr2 (82-145)||(9847160-9847222)
chr2 (76-133)||(38066633-38066689)
[»] scaffold0010 (1 HSPs)
scaffold0010 (82-272)||(140629-140819)
[»] scaffold0508 (1 HSPs)
scaffold0508 (82-271)||(3220-3410)
[»] scaffold0027 (1 HSPs)
scaffold0027 (82-238)||(141824-141978)
[»] scaffold0137 (1 HSPs)
scaffold0137 (82-317)||(9280-9512)
[»] scaffold0018 (1 HSPs)
scaffold0018 (196-314)||(174146-174263)
[»] scaffold0564 (1 HSPs)
scaffold0564 (82-314)||(4515-4745)
[»] scaffold0182 (1 HSPs)
scaffold0182 (82-140)||(23246-23303)
[»] scaffold0006 (2 HSPs)
scaffold0006 (82-213)||(59855-59985)
scaffold0006 (82-130)||(59504-59551)


Alignment Details
Target: chr1 (Bit Score: 159; Significance: 2e-84; HSPs: 37)
Name: chr1
Description:

Target: chr1; HSP #1
Raw Score: 159; E-Value: 2e-84
Query Start/End: Original strand, 82 - 272
Target Start/End: Original strand, 34006404 - 34006594
Alignment:
Q  82 ttgtaacatggatagtcattttagagaacaatattaatcttcctaactctcatcattctgttttgagtcattgttacctgttcttagtcaaaaatcaggt 181  Q
    |||||||||||||||||||||||| ||||||||||||||||||||||||||||| |||| ||||| ||||||| ||||||||||||||||||||| ||||    
T  34006404 ttgtaacatggatagtcattttagggaacaatattaatcttcctaactctcatccttctattttgtgtcattgctacctgttcttagtcaaaaattaggt 34006503  T
Q  182 tttcgggctacttgatcggattgctccgaaacatacccagaaaatcagaaaaaattcaaggatcatgactcccgtagaagggacttcttac 272  Q
    |||||||||||||||||||||||||||||||| | ||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  34006504 tttcgggctacttgatcggattgctccgaaacttccccagaaaatcagaaaaaattcaaggatcatgactcccgtagaagggacttcttac 34006594  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #2
Raw Score: 144; E-Value: 1e-75
Query Start/End: Original strand, 82 - 317
Target Start/End: Complemental strand, 41584680 - 41584447
Alignment:
Q  82 ttgtaacatggatagtcattttagagaacaatattaatcttcctaactctcatcattctgttttgagtcattgttacctgttcttagtcaaaaatcaggt 181  Q
    |||||||||||||||||||||||  || |||||||||||||||||||||||||| |||||||||| ||||||||||| |||||||||||||||||| |||    
T  41584680 ttgtaacatggatagtcattttatgga-caatattaatcttcctaactctcatccttctgttttgggtcattgttacatgttcttagtcaaaaatcgggt 41584582  T
Q  182 tttcgggctacttgatcggattgctccgaaacatacccagaaaatcagaaaaaattcaaggatcatgactcccgtagaagggacttcttacattgactct 281  Q
    |||||||||||||||||||||||||||||||| | ||||||||||||||||||||||||||| |||||||||| |||||||||||||||||   |||||     
T  41584581 tttcgggctacttgatcggattgctccgaaacttgcccagaaaatcagaaaaaattcaaggaccatgactcccatagaagggacttcttac-gggactcc 41584483  T
Q  282 gcccctcaaaataaaaaattacatcatttagaccca 317  Q
    |||||||| |||  |||||| |||  ||||||||||    
T  41584482 gcccctcacaatctaaaattccattgtttagaccca 41584447  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #3
Raw Score: 138; E-Value: 5e-72
Query Start/End: Original strand, 82 - 315
Target Start/End: Complemental strand, 52744858 - 52744627
Alignment:
Q  82 ttgtaacatggatagtcattttagagaacaatattaatcttcctaactctcatcattctgttttgagtcattgttacctgttcttagtcaaaaatcaggt 181  Q
    |||||||||||||||||||||||| |||||| |||||||||||||||||||||| |||||||||| ||||||||||| |||||||||||||||||  |||    
T  52744858 ttgtaacatggatagtcattttag-gaacaacattaatcttcctaactctcatccttctgttttgggtcattgttacttgttcttagtcaaaaattgggt 52744760  T
Q  182 tttcgggctacttgatcggattgctccgaaacatacccagaaaatcagaaaaaattcaaggatcatgactcccgtagaagggacttcttacattgactct 281  Q
    |||||| ||||||||||||||||||||||||| | ||||||||||||||||||||||||||| |||||||| | ||||||||||||||||||  |||||     
T  52744759 tttcggactacttgatcggattgctccgaaacttccccagaaaatcagaaaaaattcaaggaccatgactctcatagaagggacttcttaca-agactcc 52744661  T
Q  282 gcccctcaaaataaaaaattacatcatttagacc 315  Q
     || ||||||||  |||||| |||| ||||||||    
T  52744660 acctctcaaaattcaaaatttcatcgtttagacc 52744627  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #4
Raw Score: 136; E-Value: 8e-71
Query Start/End: Original strand, 82 - 313
Target Start/End: Complemental strand, 45046865 - 45046636
Alignment:
Q  82 ttgtaacatggatagtcattttagagaacaatattaatcttcctaactctcatcattctgttttgagtcattgttacctgttcttagtcaaaaatcaggt 181  Q
    ||||||||||||||||||||| || || |||||||||||||||||||||||||| |||||||||| |||||||||||||||||||||| ||||| | |||    
T  45046865 ttgtaacatggatagtcatttcaggga-caatattaatcttcctaactctcatccttctgttttgggtcattgttacctgttcttagttaaaaaccgggt 45046767  T
Q  182 tttcgggctacttgatcggattgctccgaaacatacccagaaaatcagaaaaaattcaaggatcatgactcccgtagaagggacttcttacattgactct 281  Q
    |||||||||||||||||||||||||||||||| | |||| |||||||||||||||||||||| |||||||||| ||||||||||||||||    |||||     
T  45046766 tttcgggctacttgatcggattgctccgaaacttgcccaaaaaatcagaaaaaattcaaggaccatgactcccttagaagggacttctta-tgagactcc 45046668  T
Q  282 gcccctcaaaataaaaaattacatcatttaga 313  Q
    ||||||||||||  |||||| |||| ||||||    
T  45046667 gcccctcaaaatccaaaattccatcgtttaga 45046636  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #5
Raw Score: 132; E-Value: 2e-68
Query Start/End: Original strand, 82 - 317
Target Start/End: Complemental strand, 40907949 - 40907716
Alignment:
Q  82 ttgtaacatggatagtcattttagagaacaatattaatcttcctaactctcatcattctgttttgagtcattgttacctgttcttagtcaaaaatcaggt 181  Q
    |||||||||||||| |||||||||||| ||||||||||||||||||||| |||| ||||| |||| |||||||||||||||| ||||| ||||||| |||    
T  40907949 ttgtaacatggataatcattttagaga-caatattaatcttcctaactcccatctttctgctttgggtcattgttacctgttgttagtaaaaaatcgggt 40907851  T
Q  182 tttcgggctacttgatcggattgctccgaaacatacccagaaaatcagaaaaaattcaaggatcatgactcccgtagaagggacttcttacattgactct 281  Q
    |||||| ||||||||||||||||||||||||| | |||||||||||||||||||||||||||||||||||| | || |||||||||||||    |||||     
T  40907850 tttcggactacttgatcggattgctccgaaacttccccagaaaatcagaaaaaattcaaggatcatgactctcataaaagggacttctta-tgggactcc 40907752  T
Q  282 gcccctcaaaataaaaaattacatcatttagaccca 317  Q
    ||||||||||||  |||||| |||| ||||||||||    
T  40907751 gcccctcaaaatccaaaattccatcgtttagaccca 40907716  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #6
Raw Score: 128; E-Value: 5e-66
Query Start/End: Original strand, 85 - 316
Target Start/End: Original strand, 27794978 - 27795206
Alignment:
Q  85 taacatggatagtcattttagagaacaatattaatcttcctaactctcatcattctgttttgagtcattgttacctgttcttagtcaaaaatcaggtttt 184  Q
    |||||| |||||||||||||  || |||||||||||||||||||| ||||| |||||||||| |||||||||||||||||||||||||| ||| ||||||    
T  27794978 taacatagatagtcattttatgga-caatattaatcttcctaactatcatc-ttctgttttgggtcattgttacctgttcttagtcaaacatcgggtttt 27795075  T
Q  185 cgggctacttgatcggattgctccgaaacatacccagaaaatcagaaaaaattcaaggatcatgactcccgtagaagggacttcttacattgactctgcc 284  Q
     |||||||||||||||||||||||||||| | | ||||||||||||||||||||||||||||||||||  ||||||| |||||||||||  ||||| |||    
T  27795076 tgggctacttgatcggattgctccgaaacttccacagaaaatcagaaaaaattcaaggatcatgactcttgtagaagagacttcttaca-ggactccgcc 27795174  T
Q  285 cctcaaaataaaaaattacatcatttagaccc 316  Q
    |||||||||  |||||| |||| |||||||||    
T  27795175 cctcaaaatccaaaatttcatcgtttagaccc 27795206  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #7
Raw Score: 125; E-Value: 3e-64
Query Start/End: Original strand, 85 - 261
Target Start/End: Original strand, 7011357 - 7011532
Alignment:
Q  85 taacatggatagtcattttagagaacaatattaatcttcctaactctcatcattctgttttgagtcattgttacctgttcttagtcaaaaatcaggtttt 184  Q
    ||||||||||||||||||||| || |||||||||||||| ||||||||||| |||||||||  |||||||| ||||||| ||||||||||||| ||||||    
T  7011357 taacatggatagtcattttaggga-caatattaatcttcttaactctcatccttctgttttaggtcattgtaacctgtttttagtcaaaaatcgggtttt 7011455  T
Q  185 cgggctacttgatcggattgctccgaaacatacccagaaaatcagaaaaaattcaaggatcatgactcccgtagaag 261  Q
    ||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||| |||||||||| ||||||    
T  7011456 cgggctacttgatcggattgctccgaaacatccccagaaaatcagaaaaaattcaaggaccatgactcccttagaag 7011532  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #8
Raw Score: 124; E-Value: 1e-63
Query Start/End: Original strand, 82 - 269
Target Start/End: Complemental strand, 26723503 - 26723317
Alignment:
Q  82 ttgtaacatggatagtcattttagagaacaatattaatcttcctaactctcatcattctgttttgagtcattgttacctgttcttagtcaaaaatcaggt 181  Q
    |||||||||| ||||||||||||| ||||||||||||||||||| ||||| |||||||| |||||||||||||||| ||||||||||| ||||||| |||    
T  26723503 ttgtaacatg-atagtcattttagggaacaatattaatcttccttactctgatcattctattttgagtcattgttatctgttcttagtaaaaaatcgggt 26723405  T
Q  182 tttcgggctacttgatcggattgctccgaaacatacccagaaaatcagaaaaaattcaaggatcatgactcccgtagaagggacttct 269  Q
    ||| || ||||||||||||||||||||||||| | |||||||||||||||||||||||||||| ||||||||| || |||||||||||    
T  26723404 ttttggactacttgatcggattgctccgaaacttccccagaaaatcagaaaaaattcaaggattatgactcccttataagggacttct 26723317  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #9
Raw Score: 117; E-Value: 2e-59
Query Start/End: Original strand, 82 - 317
Target Start/End: Original strand, 42546111 - 42546344
Alignment:
Q  82 ttgtaacatggatagtcattttagagaacaatattaatcttcctaactctcatcattctgttttgagtcattgttacctgttcttagtcaaaaatcaggt 181  Q
    |||||||||||||||||||||||||||  |||||||||| | |||||||||||| |||||||||| |||||||||| ||||||||||| ||||| | |||    
T  42546111 ttgtaacatggatagtcattttagagat-aatattaatcattctaactctcatccttctgttttgggtcattgttatctgttcttagttaaaaaccgggt 42546209  T
Q  182 ttt-cgggctacttgatcggattgctccgaaacatacccagaaaatcagaaaaaattcaaggatcatgactcccgtagaagggacttcttacattgactc 280  Q
    ||| ||||||||||||||||||||||||||||| | ||||||||||||||||||||| ||||| |||||||||| ||||||| |||||||||   |||||    
T  42546210 ttttcgggctacttgatcggattgctccgaaacttccccagaaaatcagaaaaaatttaaggaccatgactcccttagaaggaacttcttac-gggactc 42546308  T
Q  281 tgcccctcaaaataaaaaattacatcatttagaccca 317  Q
     | ||||||||||  |||||| |||| ||||||||||    
T  42546309 cg-ccctcaaaatccaaaattccatcgtttagaccca 42546344  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #10
Raw Score: 116; E-Value: 7e-59
Query Start/End: Original strand, 82 - 317
Target Start/End: Complemental strand, 18583559 - 18583326
Alignment:
Q  82 ttgtaacatggatagtcattttagagaacaatattaatcttcctaactctcatcattctgttttgagtcattgttacctgttcttagtcaaaaatcaggt 181  Q
    |||||||||| |||| |||||||| || |||||||||||| ||||||||| ||| || ||||||| |||||||||||||||||||||||||||||| |||    
T  18583559 ttgtaacatgtatagccattttaggga-caatattaatctgcctaactcttatccttttgttttgggtcattgttacctgttcttagtcaaaaatcgggt 18583461  T
Q  182 tttcgggctacttgatcggattgctccgaaacatacccagaaaatcagaaaaaattcaaggatcatgactcccgtagaagggacttcttacattgactct 281  Q
    |||||||||||||||||||||||||| ||||| | |||| |||||||||| ||||||||||| || ||||||| |||||| ||||||||||   |||||     
T  18583460 tttcgggctacttgatcggattgctctgaaacttccccaaaaaatcagaacaaattcaaggaccacgactcccatagaagagacttcttac-gggactcc 18583362  T
Q  282 gcccctcaaaataaaaaattacatcatttagaccca 317  Q
    ||||||||||||  |||||| |||  ||||||||||    
T  18583361 gcccctcaaaatccaaaattccattgtttagaccca 18583326  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #11
Raw Score: 112; E-Value: 2e-56
Query Start/End: Original strand, 82 - 293
Target Start/End: Original strand, 23442882 - 23443091
Alignment:
Q  82 ttgtaacatggatagtcattttagagaacaatattaatcttcctaactctcatcattctgttttgagtcattgttacctgttcttagtcaaaaatcaggt 181  Q
    |||||||||| | || |||||||| || |||||||||||||||||||||| ||| || ||||||| |||||||||||||||||||||||||||||| |||    
T  23442882 ttgtaacatgtacagccattttaggga-caatattaatcttcctaactcttatccttttgttttgggtcattgttacctgttcttagtcaaaaatcgggt 23442980  T
Q  182 tttcgggctacttgatcggattgctccgaaacatacccagaaaatcagaaaaaattcaaggatcatgactcccgtagaagggacttcttacattgactct 281  Q
    |||||| ||||||||||||||||||| ||||| | |||| |||||||||||||||||||||| ||| |||||| |||||| |||||||| ||  ||||||    
T  23442981 tttcggactacttgatcggattgctctgaaacttccccaaaaaatcagaaaaaattcaaggaccataactcccatagaagagacttcttgca-cgactct 23443079  T
Q  282 gcccctcaaaat 293  Q
    || |||||||||    
T  23443080 gctcctcaaaat 23443091  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #12
Raw Score: 108; E-Value: 4e-54
Query Start/End: Original strand, 82 - 253
Target Start/End: Complemental strand, 45567905 - 45567735
Alignment:
Q  82 ttgtaacatggatagtcattttagagaacaatattaatcttcctaactctcatcattctgttttgagtcattgttacctgttcttagtcaaaaatcaggt 181  Q
    |||||| ||||||||||||||||| || ||||||||||||| ||||||||||||  | ||||||| |||||||||||||||||||||| ||||||| |||    
T  45567905 ttgtaatatggatagtcattttaggga-caatattaatctttctaactctcatccatttgttttgggtcattgttacctgttcttagtaaaaaatcgggt 45567807  T
Q  182 tttcgggctacttgatcggattgctccgaaacatacccagaaaatcagaaaaaattcaaggatcatgactcc 253  Q
    |||||| ||||||||||||||||||||||||| | |||| |||||||||||||||||||||| |||||||||    
T  45567806 tttcggactacttgatcggattgctccgaaacttccccaaaaaatcagaaaaaattcaaggaccatgactcc 45567735  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #13
Raw Score: 106; E-Value: 7e-53
Query Start/End: Original strand, 82 - 271
Target Start/End: Original strand, 49786412 - 49786600
Alignment:
Q  82 ttgtaacatggatagtcattttagagaacaatattaatcttcctaactctcatcattctgttttgagtcattgttacctgttcttagtcaaaaatcaggt 181  Q
    |||||||||| |||| |||||||  || |||||||||||||||||||||| ||| || ||||||| |||| |||||| |||| |||||||||||||| ||    
T  49786412 ttgtaacatgtatagccattttatgga-caatattaatcttcctaactcttatccttttgttttgggtcaatgttacatgtttttagtcaaaaatcaagt 49786510  T
Q  182 tttcgggctacttgatcggattgctccgaaacatacccagaaaatcagaaaaaattcaaggatcatgactcccgtagaagggacttctta 271  Q
    |||||| ||||||||||||||||||| ||||| | |||| |||||||||||||||||||||| ||||||||||||||||| |||||||||    
T  49786511 tttcggcctacttgatcggattgctctgaaacttccccaaaaaatcagaaaaaattcaaggaccatgactcccgtagaagagacttctta 49786600  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #14
Raw Score: 104; E-Value: 1e-51
Query Start/End: Original strand, 82 - 317
Target Start/End: Complemental strand, 28866645 - 28866412
Alignment:
Q  82 ttgtaacatggatagtcattttagagaacaatattaatcttcctaactctcatcattctgttttgagtcattgttacctgttcttagtcaaaaatcaggt 181  Q
    ||||||||||||||| |||||||  || || | ||||||||| ||||||||||| |||||||||| | |||||||||||||||||||||||||||| |      
T  28866645 ttgtaacatggatagccattttatgga-catttttaatcttcataactctcatccttctgttttgggacattgttacctgttcttagtcaaaaatcggta 28866547  T
Q  182 tttcgggctacttgatcggattgctccgaaacatacccagaaaatcagaaaaaattcaaggatcatgactcccgtagaagggacttcttacattgactct 281  Q
    |||||| ||||||||||||||||||||||||| | |||| ||||| |||||||||||||||| | |||||||| ||||||| ||||| |||   |||||     
T  28866546 tttcggactacttgatcggattgctccgaaacttccccaaaaaattagaaaaaattcaaggaccgtgactcccttagaaggcacttcctac-gggactcc 28866448  T
Q  282 gcccctcaaaataaaaaattacatcatttagaccca 317  Q
    ||||||||||||  |||||| |||| ||||||||||    
T  28866447 gcccctcaaaatccaaaatttcatcgtttagaccca 28866412  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #15
Raw Score: 103; E-Value: 4e-51
Query Start/End: Original strand, 76 - 313
Target Start/End: Complemental strand, 6223767 - 6223539
Alignment:
Q  76 atatgcttgtaacatggatagtcattttagagaacaatattaatcttcctaactctcatcattctgttttgagtcattgttacctgttcttagtcaaaaa 175  Q
    ||||| |||||||||||||||||||||||| || ||||| |     |||||||| ||||  |||||||||  ||||||||||| ||||||||||||||||    
T  6223767 atatgtttgtaacatggatagtcattttaggga-caataat-----tcctaactatcattcttctgttttaggtcattgttacatgttcttagtcaaaaa 6223674  T
Q  176 tcaggttttcgggctacttgatcggattgctccgaaacatacccagaaaatcagaaaaaattcaaggatcatgactcccgtagaagggacttcttacatt 275  Q
    || ||||||||||||||||||||||||||||| ||||| | |||||||||||||| ||||||||||||||||||||||| |||||| ||||||||||       
T  6223673 tcgggttttcgggctacttgatcggattgctctgaaactttcccagaaaatcaga-aaaattcaaggatcatgactcccttagaagagacttcttac--g 6223577  T
Q  276 gactctgcccctcaaaataaaaaattacatcatttaga 313  Q
    ||| | ||||||||||||  |||||| |||| ||||||    
T  6223576 gacaccgcccctcaaaatccaaaattccatcgtttaga 6223539  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #16
Raw Score: 103; E-Value: 4e-51
Query Start/End: Original strand, 82 - 272
Target Start/End: Complemental strand, 33611425 - 33611236
Alignment:
Q  82 ttgtaacatggatagtcattttagagaacaatattaatcttcctaactctcatcattctgttttgagtcattgttacctgttcttagtcaaaaatcaggt 181  Q
    |||||||||| |||| ||||||| || |||||||| |||||||||| ||| ||| || ||||||| |||||||||||||||||||||||||||||| |||    
T  33611425 ttgtaacatgtatagccatttta-aggacaatatttatcttcctaaatcttatccttttgttttgggtcattgttacctgttcttagtcaaaaatcgggt 33611327  T
Q  182 tttcgggctacttgatcggattgctccgaaacatacccagaaaatcagaaaaaattcaaggatcatgactcccgtagaagggacttcttac 272  Q
    |||||||||||||||||||||||||| ||||| | |||| ||||||||||||||||| |||| | ||||| || || ||||||||||||||    
T  33611326 tttcgggctacttgatcggattgctctgaaacttccccaaaaaatcagaaaaaattcgaggaccgtgacttccataaaagggacttcttac 33611236  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #17
Raw Score: 101; E-Value: 6e-50
Query Start/End: Original strand, 82 - 242
Target Start/End: Original strand, 49677627 - 49677786
Alignment:
Q  82 ttgtaacatggatagtcattttagagaacaatattaatcttcctaactctcatcattctgttttgagtcattgttacctgttcttagtcaaaaatcaggt 181  Q
    ||||||||| |||||||||||||| || |||||||||||||||||||||||||  || ||||||| ||||||||||| |||||||||| ||||||| |||    
T  49677627 ttgtaacatagatagtcattttaggga-caatattaatcttcctaactctcattcttatgttttgggtcattgttacatgttcttagttaaaaatcgggt 49677725  T
Q  182 tttcgggctacttgatcggattgctccgaaacatacccagaaaatcagaaaaaattcaagg 242  Q
    |||| | ||||||||||||||||||||||||| | ||||||||||||||||||||||||||    
T  49677726 tttcagcctacttgatcggattgctccgaaacttccccagaaaatcagaaaaaattcaagg 49677786  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #18
Raw Score: 98; E-Value: 4e-48
Query Start/End: Original strand, 96 - 317
Target Start/End: Original strand, 38885371 - 38885590
Alignment:
Q  96 gtcattttagagaacaatattaatcttcctaactctcatcattctgttttgagtcattgttacctgttcttagtcaaaaatcaggttttcgggctacttg 195  Q
    ||||||||| || ||||||||||| ||||||||||||||| |||||||||| ||||||||||| |||||||||| ||||||  |||||||||||||||||    
T  38885371 gtcatttta-aggacaatattaattttcctaactctcatccttctgttttgggtcattgttacttgttcttagttaaaaattgggttttcgggctacttg 38885469  T
Q  196 atcggattgctccgaaacatacccagaaaatcagaaaaaattcaaggatcatgactcccgtagaagggacttcttacattgactctgcccctcaaaataa 295  Q
    |||||||||||||||||| | |||| ||||| | |||||||||||| | ||| |||| | | ||||||||||||||    ||||| ||||||||||||      
T  38885470 atcggattgctccgaaactttcccaaaaaataaaaaaaaattcaagcaccataactctcctggaagggacttctta-tgggactccgcccctcaaaattc 38885568  T
Q  296 aaaattacatcatttagaccca 317  Q
    |||||| |||| ||||||||||    
T  38885569 aaaattccatcgtttagaccca 38885590  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #19
Raw Score: 97; E-Value: 2e-47
Query Start/End: Original strand, 82 - 254
Target Start/End: Complemental strand, 15069856 - 15069686
Alignment:
Q  82 ttgtaacatggatagtcattttagagaacaatattaatcttcctaactctcatcattctgttttgagtcattgttacctgttcttagtcaaaaatcaggt 181  Q
    ||||||||||||||||||||||||||| ||||||||||||| |||||| ||||| ||||||||||  |||||||||| |||||||||| ||||||| | |    
T  15069856 ttgtaacatggatagtcattttagaga-caatattaatcttactaactttcatccttctgttttggatcattgttacttgttcttagttaaaaatcggat 15069758  T
Q  182 tttcgggctacttgatcggattgctccgaaacatacccagaaaatcagaaaaaattcaaggatcatgactccc 254  Q
    ||||| ||||||||||||||||||| |||||| | ||||||||||||||||||| ||||||| ||| ||||||    
T  15069757 tttcgagctacttgatcggattgct-cgaaactttcccagaaaatcagaaaaaaatcaaggaccatcactccc 15069686  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #20
Raw Score: 96; E-Value: 6e-47
Query Start/End: Original strand, 82 - 232
Target Start/End: Original strand, 17000522 - 17000672
Alignment:
Q  82 ttgtaacatggatagtcattttagagaacaatattaatcttcctaactctcatcattctgtttt-gagtcattgttacctgttcttagtcaaaaatcagg 180  Q
    |||||||||||||||||||||||| || |||||||||||||||||||||||||| ||| ||||| | ||||||||||||||||||||||||||||||       
T  17000522 ttgtaacatggatagtcattttaggga-caatattaatcttcctaactctcatccttccgtttttgggtcattgttacctgttcttagtcaaaaatcgaa 17000620  T
Q  181 ttttcgggctacttgatcggattgctccgaaacatacccagaaaatcagaaa 232  Q
    ||||||||||||||||| ||||||||||||||| | ||||||||||||||||    
T  17000621 ttttcgggctacttgattggattgctccgaaacttccccagaaaatcagaaa 17000672  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #21
Raw Score: 96; E-Value: 6e-47
Query Start/End: Original strand, 82 - 317
Target Start/End: Complemental strand, 24472842 - 24472610
Alignment:
Q  82 ttgtaacatggatagtcattttagagaacaatattaatcttcctaactctcatcattctgttttgagtcattgttacctgttcttagtcaaaaatcaggt 181  Q
    |||||||||||||||||||||||  ||| |||||||| |||||||||| ||||  |||||||||  |||||||||| |||||||||||||||||||   |    
T  24472842 ttgtaacatggatagtcattttaaggaa-aatattaagcttcctaactatcattcttctgtttttggtcattgttagctgttcttagtcaaaaatcgaat 24472744  T
Q  182 tttcgggctacttgatcggattgctccgaaacatacccagaaaatcagaaaaaattcaaggatcatgactcccgtagaagggacttcttacattgactct 281  Q
    ||  |||| ||||||| ||||||||||||||| | ||||||||||||||||||| |||||||||| ||||||| ||||||||||||||| |   |||||     
T  24472743 ttgtgggcaacttgattggattgctccgaaacttccccagaaaatcagaaaaaa-tcaaggatcaagactcccatagaagggacttcttgc-gggactcc 24472646  T
Q  282 gcccctcaaaataaaaaattacatcatttagaccca 317  Q
    |||| |||||||  |||||| |||| ||||||||||    
T  24472645 gcccttcaaaatccaaaatttcatcgtttagaccca 24472610  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #22
Raw Score: 88; E-Value: 4e-42
Query Start/End: Original strand, 82 - 271
Target Start/End: Complemental strand, 44573112 - 44572927
Alignment:
Q  82 ttgtaacatggatagtcattttagagaacaatattaatcttcctaactctcatcattctgttttgagtcattgttacctgttcttagtcaaaaatcaggt 181  Q
    |||||||||| ||||||||||||| || ||||||||||||| |||||||||||| ||||||||||  |||||||||| ||||||||||||||| |         
T  44573112 ttgtaacatgaatagtcattttaggga-caatattaatctttctaactctcatccttctgttttggatcattgttacttgttcttagtcaaaatt---ac 44573017  T
Q  182 tttcgggctacttgatcggattgctccgaaacatacccagaaaatcagaaaaaattcaaggatcatgactcccgtagaagggacttctta 271  Q
    ||  |||| |||||||| |||||||||||||| | |||| |||||||||||||||||||||| |||||||||| |||||| |||||||||    
T  44573016 ttaggggcaacttgatcagattgctccgaaacttccccataaaatcagaaaaaattcaaggaccatgactcccatagaagagacttctta 44572927  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #23
Raw Score: 85; E-Value: 2e-40
Query Start/End: Original strand, 82 - 270
Target Start/End: Complemental strand, 3561350 - 3561163
Alignment:
Q  82 ttgtaacatggatagtcattttagagaacaatattaatcttcctaactctcatcattctgttttgagtcattgttacctgttcttagtcaaaaatcaggt 181  Q
    ||||||||| |||||| |||||| || ||| |||||||||| ||||||||||||||||||||||  ||||||||||  |||||||||||||||||| | |    
T  3561350 ttgtaacatagatagtaatttta-aggacagtattaatctttctaactctcatcattctgttttaggtcattgttagttgttcttagtcaaaaatccgat 3561252  T
Q  182 tttcgggctacttgatcggattgctccgaaacatacccagaaaatcagaaaaaattcaaggatcatgactcccgtagaagggacttctt 270  Q
     || ||| ||||||||| |||||||||||||| | |||| |||||||||||| | ||||| |||| ||||||| |||||| ||||||||    
T  3561251 ctttgggttacttgatcagattgctccgaaactttcccataaaatcagaaaacaatcaagaatcaagactcccatagaagtgacttctt 3561163  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #24
Raw Score: 84; E-Value: 9e-40
Query Start/End: Original strand, 82 - 213
Target Start/End: Complemental strand, 40650690 - 40650560
Alignment:
Q  82 ttgtaacatggatagtcattttagagaacaatattaatcttcctaactctcatcattctgttttgagtcattgttacctgttcttagtcaaaaatcaggt 181  Q
    |||||||||||||| ||||||||| || |||||||||||||||||||||||||| ||||  |||| |||||||||||||||||||||| ||||| |  ||    
T  40650690 ttgtaacatggataatcattttaggga-caatattaatcttcctaactctcatccttctcgtttgggtcattgttacctgttcttagttaaaaaccgagt 40650592  T
Q  182 tttcgggctacttgatcggattgctccgaaac 213  Q
    ||||||||||||||||||||||||||||||||    
T  40650591 tttcgggctacttgatcggattgctccgaaac 40650560  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #25
Raw Score: 72; E-Value: 1e-32
Query Start/End: Original strand, 82 - 228
Target Start/End: Complemental strand, 34162737 - 34162591
Alignment:
Q  82 ttgtaacatggatagtcattttagagaacaatattaatcttcctaactctcatcattctgtttt-gagtcattgttacctgttcttagtcaaaaatcagg 180  Q
    ||||||||||||||| |||||||| || |||||||||||||||||||||  ||| ||| ||||| | ||||||||||| ||||||||||||||||||       
T  34162737 ttgtaacatggatagccattttaggga-caatattaatcttcctaactcctatccttccgtttttgggtcattgttacatgttcttagtcaaaaatcgaa 34162639  T
Q  181 ttttcgggctacttgatcggattgctccgaaacatacccagaaaatca 228  Q
    ||||||||||||||||| || |||||||||||| | ||||||||||||    
T  34162638 ttttcgggctacttgattggtttgctccgaaacttccccagaaaatca 34162591  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #26
Raw Score: 71; E-Value: 5e-32
Query Start/End: Original strand, 82 - 240
Target Start/End: Complemental strand, 25563429 - 25563272
Alignment:
Q  82 ttgtaacatggatagtcattttagagaacaatattaatcttcctaactctcatcattctgttttgagtcattgttacctgttcttagtcaaaaatcaggt 181  Q
    |||||| |||||||||||||||| || |||||||||| |||| |||| |||||| || ||||||  ||||||||||  |||| ||||||||||||| | |    
T  25563429 ttgtaatatggatagtcatttta-aggacaatattaagcttcataaccctcatccttttgttttaggtcattgttagttgttattagtcaaaaatccgat 25563331  T
Q  182 tttcgggctacttgatcggattgctccgaaacatacccagaaaatcagaaaaaattcaa 240  Q
     |||| |||||||||||||||||||||||||| | || |||||||||| ||||||||||    
T  25563330 attcgagctacttgatcggattgctccgaaacttcccaagaaaatcaggaaaaattcaa 25563272  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #27
Raw Score: 55; E-Value: 2e-22
Query Start/End: Original strand, 112 - 255
Target Start/End: Complemental strand, 45880095 - 45879948
Alignment:
Q  112 atattaatcttcctaactctcatcattctgttttgagtcattgttacctgttcttagtcaaaaatcaggttttcgggctacttgatcggattgctccgaa 211  Q
    |||||||||||||||||| ||||| |||||||||  ||||||||||  | || |||||||||||||  ||||| ||| |||||||||  |||||||||||    
T  45880095 atattaatcttcctaactttcatccttctgttttaggtcattgttagttttttttagtcaaaaatctagtttttgggatacttgatcaaattgctccgaa 45879996  T
Q  212 acatacccagaaaatcag----aaaaaattcaaggatcatgactcccg 255  Q
    || || ||||||||| ||    |||||| |||||||||| ||||||||    
T  45879995 acttatccagaaaattagaagaaaaaaaatcaaggatcaagactcccg 45879948  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #28
Raw Score: 49; E-Value: 7e-19
Query Start/End: Original strand, 112 - 228
Target Start/End: Original strand, 42929057 - 42929173
Alignment:
Q  112 atattaatcttcctaactctcatcattctgttttgagtcattgttacctgttcttagtcaaaaatcaggttttcgggctacttgatcggattgctccgaa 211  Q
    |||||||| ||| ||||||||||  || ||||||   |||||||||  |||||| ||||||||||| |||||||| ||||||||||| ||||||||||||    
T  42929057 atattaattttcttaactctcattcttatgttttagatcattgttagttgttctcagtcaaaaatctggttttcgagctacttgatcagattgctccgaa 42929156  T
Q  212 acatacccagaaaatca 228  Q
    || | |||| |||||||    
T  42929157 actttcccataaaatca 42929173  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #29
Raw Score: 47; E-Value: 1e-17
Query Start/End: Original strand, 82 - 152
Target Start/End: Complemental strand, 32817626 - 32817557
Alignment:
Q  82 ttgtaacatggatagtcattttagagaacaatattaatcttcctaactctcatcattctgttttgagtcat 152  Q
    |||||||||||||||||||||||| || ||||||||||||||||||||| |||| |||||||||| |||||    
T  32817626 ttgtaacatggatagtcattttaggga-caatattaatcttcctaactcccatccttctgttttgggtcat 32817557  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #30
Raw Score: 41; E-Value: 0.00000000000004
Query Start/End: Original strand, 112 - 235
Target Start/End: Complemental strand, 5284306 - 5284182
Alignment:
Q  112 atattaatcttcctaactctcatcattctgttttgagtcattgttacctgttcttagt-caaaaatcaggttttcgggctacttgatcggattgctccga 210  Q
    |||||||||||||||||  |||||||||||||||  ||||||||||  ||||| ||||  |||||||   |||| | ||||||||||| ||||||||||     
T  5284306 atattaatcttcctaaccttcatcattctgttttaggtcattgttagttgttcctagtaaaaaaatctaatttttgagctacttgatcagattgctccgg 5284207  T
Q  211 aacatacccagaaaatcagaaaaaa 235  Q
    |||||  ||| ||||||| ||||||    
T  5284206 aacatttccaaaaaatcaaaaaaaa 5284182  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #31
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 82 - 145
Target Start/End: Complemental strand, 43318995 - 43318933
Alignment:
Q  82 ttgtaacatggatagtcattttagagaacaatattaatcttcctaactctcatcattctgtttt 145  Q
    ||||||||| ||||||||||||| |||||||||||||||||||||||| ||||| || ||||||    
T  43318995 ttgtaacattgatagtcatttta-agaacaatattaatcttcctaactttcatccttgtgtttt 43318933  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #32
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 152 - 213
Target Start/End: Original strand, 890738 - 890799
Alignment:
Q  152 ttgttacctgttcttagtcaaaaatcaggttttcgggctacttgatcggattgctccgaaac 213  Q
    |||||| || |||||||||||||||| |||||||||| ||||||||| ||||||||| ||||    
T  890738 ttgttagctattcttagtcaaaaatctggttttcgggttacttgatcagattgctccaaaac 890799  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #33
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 82 - 145
Target Start/End: Complemental strand, 800607 - 800545
Alignment:
Q  82 ttgtaacatggatagtcattttagagaacaatattaatcttcctaactctcatcattctgtttt 145  Q
    ||||| ||||||||||||||||  || ||||||||||| ||||||||||||||| || ||||||    
T  800607 ttgtagcatggatagtcattttt-aggacaatattaattttcctaactctcatccttgtgtttt 800545  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #34
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 82 - 145
Target Start/End: Original strand, 8364152 - 8364213
Alignment:
Q  82 ttgtaacatggatagtcattttagagaacaatattaatcttcctaactctcatcattctgtttt 145  Q
    ||||||||||||||||||||||| | || |||||||||| |||||||||||||| || ||||||    
T  8364152 ttgtaacatggatagtcatttta-aaaataatattaatc-tcctaactctcatccttgtgtttt 8364213  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #35
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 82 - 145
Target Start/End: Complemental strand, 9445901 - 9445839
Alignment:
Q  82 ttgtaacatggatagtcattttagagaacaatattaatcttcctaactctcatcattctgtttt 145  Q
    ||||| ||||||||||||||||| || | ||| ||||||||||||||||||||| || ||||||    
T  9445901 ttgtagcatggatagtcatttta-aggagaatgttaatcttcctaactctcatccttgtgtttt 9445839  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #36
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 115 - 157
Target Start/End: Complemental strand, 38159043 - 38159001
Alignment:
Q  115 ttaatcttcctaactctcatcattctgttttgagtcattgtta 157  Q
    ||||||||||||||||||||| |||||||||  ||||||||||    
T  38159043 ttaatcttcctaactctcatccttctgttttaggtcattgtta 38159001  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #37
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 186 - 272
Target Start/End: Complemental strand, 8704431 - 8704344
Alignment:
Q  186 gggctacttgatcggattgctccgaaacatacccagaaaatcag--aaaaaattcaaggatcatgactcccgtagaagggacttcttac 272  Q
    ||||||||||||| ||||| |||||||  | | |||||||||||  |||||| ||||| || | ||||||| |||||||||||||||||    
T  8704431 gggctacttgatccgattgttccgaaagtttcacagaaaatcaggaaaaaaaatcaagcatgaagactccc-tagaagggacttcttac 8704344  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8 (Bit Score: 157; Significance: 2e-83; HSPs: 37)
Name: chr8
Description:

Target: chr8; HSP #1
Raw Score: 157; E-Value: 2e-83
Query Start/End: Original strand, 82 - 317
Target Start/End: Complemental strand, 8885468 - 8885234
Alignment:
Q  82 ttgtaacatggatagtcattttagagaacaatattaatcttcctaactctcatcattctgttttgagtcattgttacctgttcttagtcaaaaatcaggt 181  Q
    |||||||||||||||||||||||| || |||||||||||||||||||||||||| |||||||||| || ||||||||||||||||||| ||||||| |||    
T  8885468 ttgtaacatggatagtcattttaggga-caatattaatcttcctaactctcatccttctgttttgggttattgttacctgttcttagtaaaaaatcgggt 8885370  T
Q  182 tttcgggctacttgatcggattgctccgaaacatacccagaaaatcagaa-aaaattcaaggatcatgactcccgtagaagggacttcttacattgactc 280  Q
    |||||| ||||||||||||||||||||||||||| ||||||||||||||| |||||||||||| |||||||||||||||||||||||||||||  |||||    
T  8885369 tttcggactacttgatcggattgctccgaaacattcccagaaaatcagaaaaaaattcaaggaccatgactcccgtagaagggacttcttaca-ggactc 8885271  T
Q  281 tgcccctcaaaataaaaaattacatcatttagaccca 317  Q
     ||||||||||||  |||||| |||||||||||||||    
T  8885270 cgcccctcaaaatccaaaattccatcatttagaccca 8885234  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #2
Raw Score: 136; E-Value: 8e-71
Query Start/End: Original strand, 82 - 317
Target Start/End: Original strand, 34853472 - 34853705
Alignment:
Q  82 ttgtaacatggatagtcattttagagaacaatattaatcttcctaactctcatcattctgttttgagtcattgttacctgttcttagtcaaaaatcaggt 181  Q
    |||||||||||||||||||||||| || |||||||||||||||||||||||||| |||||||||| ||||||||||||||||||||| || |||||  ||    
T  34853472 ttgtaacatggatagtcattttaggga-caatattaatcttcctaactctcatccttctgttttgggtcattgttacctgttcttaggcagaaatcgagt 34853570  T
Q  182 tttcgggctacttgatcggattgctccgaaacatacccagaaaatcagaaaaaattcaaggatcatgactcccgtagaagggacttcttacattgactct 281  Q
    ||||||  |||||||||||||||||||||||| | |||| |||||||||||||||||||||| |||||||||| ||||| ||||||||| |   |||||     
T  34853571 tttcggattacttgatcggattgctccgaaacttccccataaaatcagaaaaaattcaaggaccatgactcccttagaaaggacttctt-ctgggactcc 34853669  T
Q  282 gcccctcaaaataaaaaattacatcatttagaccca 317  Q
    |||||||||||||||||||| |||| ||||||||||    
T  34853670 gcccctcaaaataaaaaattccatcgtttagaccca 34853705  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #3
Raw Score: 133; E-Value: 5e-69
Query Start/End: Original strand, 85 - 317
Target Start/End: Complemental strand, 11698328 - 11698098
Alignment:
Q  85 taacatggatagtcattttagagaacaatattaatcttcctaactctcatcattctgttttgagtcattgttacctgttcttagtcaaaaatcaggtttt 184  Q
    ||||||||||||||||||||| ||  ||||||||||||||||||||||||| ||| |||||  |||||||||| ||||||||||||||||||| ||||||    
T  11698328 taacatggatagtcattttagggat-aatattaatcttcctaactctcatccttccgtttttggtcattgttatctgttcttagtcaaaaatcgggtttt 11698230  T
Q  185 cgggctacttgatcggattgctccgaaacatacccagaaaatcagaaaaaattcaaggatcatgactcccgtagaagggacttcttacattgactctgcc 284  Q
    ||||||||||||||||| ||||||||||| | ||||||||||||||||||||||||||| |||||||||| |||||||||| ||||||   ||||| |||    
T  11698229 cgggctacttgatcggaatgctccgaaacttccccagaaaatcagaaaaaattcaaggaccatgactcccatagaagggacgtcttac-gggactccgcc 11698131  T
Q  285 cctcaaaataaaaaattacatcatttagaccca 317  Q
    |||||||||  |||||| |||| ||||||||||    
T  11698130 cctcaaaatccaaaattccatcgtttagaccca 11698098  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #4
Raw Score: 128; E-Value: 5e-66
Query Start/End: Original strand, 82 - 317
Target Start/End: Complemental strand, 42280906 - 42280673
Alignment:
Q  82 ttgtaacatggatagtcattttagagaacaatattaatcttcctaactctcatcattctgttttgagtcattgttacctgttcttagtcaaaaatcaggt 181  Q
    |||||||||| ||||||||||||| || |||||||||||||||||||||||||| |||||||||| |||||||||||||||||||||||||||||| | |    
T  42280906 ttgtaacatgcatagtcattttaggga-caatattaatcttcctaactctcatccttctgttttgggtcattgttacctgttcttagtcaaaaatcggat 42280808  T
Q  182 tttcgggctacttgatcggattgctccgaaacatacccagaaaatcagaaaaaattcaaggatcatgactcccgtagaagggacttcttacattgactct 281  Q
    ||| || ||||||||||||||| || |||||| | |||||||||||| ||||| |||||||| ||| |||||| ||||||||||||||||||  |||||     
T  42280807 ttttggactacttgatcggattacttcgaaacttccccagaaaatcaaaaaaagttcaaggaccataactcccctagaagggacttcttaca-ggactcc 42280709  T
Q  282 gcccctcaaaataaaaaattacatcatttagaccca 317  Q
    ||||||||||||  |||||| |||| ||||||||||    
T  42280708 gcccctcaaaatccaaaattccatcgtttagaccca 42280673  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #5
Raw Score: 124; E-Value: 1e-63
Query Start/End: Original strand, 82 - 317
Target Start/End: Original strand, 3094829 - 3095062
Alignment:
Q  82 ttgtaacatggatagtcattttagagaacaatattaatcttcctaactctcatcattctgttttgagtcattgttacctgttcttagtcaaaaatcaggt 181  Q
    |||||||||||||| ||||||||  || |||||||||||||||||||||||||| |||||||||| ||||||||||| ||||||||||||||||||  ||    
T  3094829 ttgtaacatggataatcattttatgga-caatattaatcttcctaactctcatccttctgttttgggtcattgttacatgttcttagtcaaaaatcgagt 3094927  T
Q  182 tttcgggctacttgatcggattgctccgaaacatacccagaaaatcagaaaaaattcaaggatcatgactcccgtagaagggacttcttacattgactct 281  Q
    |||||| ||||||||||||||||||||||||| | |||||||||||| |||||||||||||| |||||||||| ||| ||||||| |||||   |||||     
T  3094928 tttcggactacttgatcggattgctccgaaacttgcccagaaaatcataaaaaattcaaggaccatgactcccataggagggactacttac-gcgactcc 3095026  T
Q  282 gcccctcaaaataaaaaattacatcatttagaccca 317  Q
     |||||||||||  |||||| |||| ||||||||||    
T  3095027 acccctcaaaatccaaaatttcatcgtttagaccca 3095062  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #6
Raw Score: 122; E-Value: 2e-62
Query Start/End: Original strand, 82 - 315
Target Start/End: Complemental strand, 14164072 - 14163841
Alignment:
Q  82 ttgtaacatggatagtcattttagagaacaatattaatcttcctaactctcatcattctgttttgagtcattgttacctgttcttagtcaaaaatcaggt 181  Q
    |||||||||||||||||||||||| || |||||||||| ||||||||||||||| |||||||||  ||||||||||||||||||||||||||||    ||    
T  14164072 ttgtaacatggatagtcattttaggga-caatattaattttcctaactctcatccttctgtttttggtcattgttacctgttcttagtcaaaaactgcgt 14163974  T
Q  182 tttcgggctacttgatcggattgctccgaaacatacccagaaaatcagaaaaaattcaaggatcatgactcccgtagaagggacttcttacattgactct 281  Q
    ||||||| ||||||||||| |||||||||||| | ||||||||||||||||||||||||||| |||| ||||| || ||   |||||||||   |||||     
T  14163973 tttcggggtacttgatcggtttgctccgaaacctccccagaaaatcagaaaaaattcaaggaccatggctcccttataaataacttcttac-gggactcc 14163875  T
Q  282 gcccctcaaaataaaaaattacatcatttagacc 315  Q
    |||||||||||||||||||| |||||||||||||    
T  14163874 gcccctcaaaataaaaaattccatcatttagacc 14163841  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #7
Raw Score: 119; E-Value: 1e-60
Query Start/End: Original strand, 82 - 252
Target Start/End: Complemental strand, 27927956 - 27927787
Alignment:
Q  82 ttgtaacatggatagtcattttagagaacaatattaatcttcctaactctcatcattctgttttgagtcattgttacctgttcttagtcaaaaatcaggt 181  Q
    ||||||||||||||||||||||||||| |||||||||||||||||||||||||| |||||||||| |||||||||||||||||||||| ||||||  |||    
T  27927956 ttgtaacatggatagtcattttagaga-caatattaatcttcctaactctcatccttctgttttgggtcattgttacctgttcttagttaaaaattgggt 27927858  T
Q  182 tttcgggctacttgatcggattgctccgaaacatacccagaaaatcagaaaaaattcaaggatcatgactc 252  Q
    |||||| |||||||||| |||||||||||||| | |||| |||||||||||||||||||||| ||||||||    
T  27927857 tttcggactacttgatcagattgctccgaaacttccccataaaatcagaaaaaattcaaggaccatgactc 27927787  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #8
Raw Score: 113; E-Value: 4e-57
Query Start/End: Original strand, 82 - 257
Target Start/End: Complemental strand, 36165853 - 36165678
Alignment:
Q  82 ttgtaacatggatagtcattttagagaacaatattaatcttcctaactctcatcattctgttttgagtcattgttacctgttcttagtcaaaaatcaggt 181  Q
    |||||||||||||||| |||||||||| |||||||||||||| ||||||||||| |||||||||| ||||||||||| |||||||||| ||||| | |||    
T  36165853 ttgtaacatggatagttattttagaga-caatattaatcttcttaactctcatccttctgttttgggtcattgttacatgttcttagttaaaaaccgggt 36165755  T
Q  182 tttc-gggctacttgatcggattgctccgaaacatacccagaaaatcagaaaaaattcaaggatcatgactcccgta 257  Q
    |||  |||||||||||||||||||||||||||| | ||||||||||||||||||||||||||| |||||||||||||    
T  36165754 tttttgggctacttgatcggattgctccgaaacttccccagaaaatcagaaaaaattcaaggaccatgactcccgta 36165678  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #9
Raw Score: 113; E-Value: 4e-57
Query Start/End: Original strand, 82 - 293
Target Start/End: Original strand, 40328041 - 40328251
Alignment:
Q  82 ttgtaacatggatagtcattttagagaacaatattaatcttcctaactctcatcattctgttttgagtcattgttacctgttcttagtcaaaaatcaggt 181  Q
    ||||||||||||| |||||||||  ||  ||||||||||||||||||||||||| |||||||||| || ||||||||||||||||||||||||||| |||    
T  40328041 ttgtaacatggattgtcattttatggat-aatattaatcttcctaactctcatctttctgttttgggttattgttacctgttcttagtcaaaaatcgggt 40328139  T
Q  182 tttcgggctacttgatcggattgctccgaaacatacccagaaaatcag-aaaaaattcaaggatcatgactcccgtagaagggacttcttacattgactc 280  Q
    |||||| |||||||||||||||||||| |||| | || |||||||||| |||||||||||||||||||||||||||| |||  |||||||||   |||||    
T  40328140 tttcggactacttgatcggattgctccaaaacttccctagaaaatcagaaaaaaattcaaggatcatgactcccgtaaaagaaacttcttac-gggactc 40328238  T
Q  281 tgcccctcaaaat 293  Q
     ||||||||||||    
T  40328239 cgcccctcaaaat 40328251  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #10
Raw Score: 112; E-Value: 2e-56
Query Start/End: Original strand, 82 - 317
Target Start/End: Original strand, 36980713 - 36980946
Alignment:
Q  82 ttgtaacatggatagtcattttagagaacaatattaatcttcctaactctcatcattctgttttgagtcattgttacctgttcttagtcaaaaatcaggt 181  Q
    |||||||||||||| |||||||| || |||||||| ||||| |||||||| ||| |||| ||||| |||||||||| || |||||||||||||||| | |    
T  36980713 ttgtaacatggataatcatttta-aggacaatattgatctttctaactcttatccttctattttgggtcattgttagctattcttagtcaaaaatccgat 36980811  T
Q  182 tttcgggctacttgatcggattgctccgaaacatacccagaaaatcagaaaaaattcaaggatcatgactcccgtagaagggacttcttacattgactct 281  Q
    |||||||||||||||||||||||||||||||| | | ||||||||||| ||||| |||||||||| ||||||| ||||||||||||||||||  |||||     
T  36980812 tttcgggctacttgatcggattgctccgaaacttccacagaaaatcaggaaaaaatcaaggatcaagactcccctagaagggacttcttaca-ggactcc 36980910  T
Q  282 gcccctcaaaataaaaaattacatcatttagaccca 317  Q
    || |||||||||  |||||  |||| ||||||||||    
T  36980911 gctcctcaaaattcaaaatcccatcgtttagaccca 36980946  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #11
Raw Score: 109; E-Value: 1e-54
Query Start/End: Original strand, 82 - 250
Target Start/End: Original strand, 9073648 - 9073815
Alignment:
Q  82 ttgtaacatggatagtcattttagagaacaatattaatcttcctaactctcatcattctgttttgagtcattgttacctgttcttagtcaaaaatcaggt 181  Q
    |||||||||||||||||||||||| || |||||||||||||||||| ||||||| || ||||||| |||||||||||||||||||||||||||||| |||    
T  9073648 ttgtaacatggatagtcattttaggga-caatattaatcttcctaagtctcatccttatgttttgggtcattgttacctgttcttagtcaaaaatcgggt 9073746  T
Q  182 tttcgggctacttgatcggattgctccgaaacatacccagaaaatcagaaaaaattcaaggatcatgac 250  Q
    ||| || ||||||||| ||||||||||||||| | | ||||||||||||||||||||||||| ||||||    
T  9073747 ttttggactacttgattggattgctccgaaacttcctcagaaaatcagaaaaaattcaaggagcatgac 9073815  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #12
Raw Score: 109; E-Value: 1e-54
Query Start/End: Original strand, 76 - 272
Target Start/End: Complemental strand, 17119900 - 17119705
Alignment:
Q  76 atatgcttgtaacatggatagtcattttagagaacaatattaatcttcctaactctcatcattctgttttgagtcattgttacctgttcttagtcaaaaa 175  Q
    ||||| ||||||||||||| |||||||||  || |||||||||||||||||||||||||| ||||||||||  |||||||||||||||||||||||||||    
T  17119900 atatgtttgtaacatggattgtcattttacgga-caatattaatcttcctaactctcatccttctgttttggatcattgttacctgttcttagtcaaaaa 17119802  T
Q  176 tcaggttttcgggctacttgatcggattgctccgaaacatacccagaaaatcagaaaaaattcaaggatcatgactcccgtagaagggacttcttac 272  Q
     | ||||||||| ||||||||| ||||| ||||||||| | ||||| |||| |||||||| ||||||||||| |||||||||||||  |||||||||    
T  17119801 ccgggttttcggactacttgattggatttctccgaaacttccccaggaaattagaaaaaaatcaaggatcattactcccgtagaagatacttcttac 17119705  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #13
Raw Score: 107; E-Value: 2e-53
Query Start/End: Original strand, 82 - 271
Target Start/End: Original strand, 28916919 - 28917107
Alignment:
Q  82 ttgtaacatggatagtcattttagagaacaatattaatcttcctaactctcatcattctgttttgagtcattgttacctgttcttagtcaaaaa-tcagg 180  Q
    |||| ||||||||||||||||||| || ||||||||||||| |||||||||||| |||||||||| ||||||||||| ||||||| || ||||| || ||    
T  28916919 ttgttacatggatagtcattttaggga-caatattaatctttctaactctcatccttctgttttgggtcattgttacatgttcttggtaaaaaaatcggg 28917017  T
Q  181 ttttcgggctacttgatcggattgctccgaaacatacccagaaaatcagaaaaaattcaaggatcatgactcccgtagaagggacttctta 271  Q
    ||||||  ||||||||||||||||||||||||| | ||||||||||||||||||||||||||| |||||||||| ||||||| ||||||||    
T  28917018 ttttcga-ctacttgatcggattgctccgaaacttccccagaaaatcagaaaaaattcaaggaccatgactcccttagaaggaacttctta 28917107  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #14
Raw Score: 107; E-Value: 2e-53
Query Start/End: Original strand, 82 - 272
Target Start/End: Complemental strand, 31519907 - 31519718
Alignment:
Q  82 ttgtaacatggatagtcattttagagaacaatattaatcttcctaactctcatcattctgttttgagtcattgttacctgttcttagtcaaaaatcaggt 181  Q
    |||||||||| |||| |||||||| || |||||||||||||||||||||  ||| || ||||||  ||||||||||| |||||||||||||||||| |||    
T  31519907 ttgtaacatgtatagccattttaggga-caatattaatcttcctaactcgtatccttttgtttttggtcattgttacttgttcttagtcaaaaatcgggt 31519809  T
Q  182 tttcgggctacttgatcggattgctccgaaacatacccagaaaatcagaaaaaattcaaggatcatgactcccgtagaagggacttcttac 272  Q
    |||||||||||||||||||||||||| ||||| | |||| |||||||||||||||||||||| |||||| ||| |||||||||| ||||||    
T  31519808 tttcgggctacttgatcggattgctctgaaacttccccataaaatcagaaaaaattcaaggaccatgacacccttagaagggacgtcttac 31519718  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #15
Raw Score: 104; E-Value: 1e-51
Query Start/End: Original strand, 82 - 261
Target Start/End: Original strand, 44106367 - 44106545
Alignment:
Q  82 ttgtaacatggatagtcattttagagaacaatattaatcttcctaactctcatcattctgttttgagtcattgttacctgttcttagtcaaaaatcaggt 181  Q
    ||||||||||||||||||||  |  || |||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||| |||    
T  44106367 ttgtaacatggatagtcattccatgga-caatattaatcttcctaactctcatccttctgttttgagtcattgttacctgttcttagtcaaaaatcgggt 44106465  T
Q  182 tttcgggctacttgatcggattgctccgaaacatacccagaaaatcagaaaaaattcaaggatcatgactcccgtagaag 261  Q
    ||||| ||||||||||| |||||||| ||||| | |||| ||||| | |||||| ||||||| |||||||||| ||||||    
T  44106466 tttcgtgctacttgatctgattgctctgaaacttccccataaaataaaaaaaaaatcaaggaccatgactcccttagaag 44106545  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #16
Raw Score: 95; E-Value: 2e-46
Query Start/End: Original strand, 82 - 271
Target Start/End: Original strand, 28423565 - 28423753
Alignment:
Q  82 ttgtaacatggatagtcattttagagaacaatattaatcttcctaactctcatcattctgttttgagtcattgttacctgttcttagtcaaaaatcaggt 181  Q
    |||||||||||||   ||||||| ||| |||||||||||||||||||||||||| |||| ||||| |||||||| |  ||||||||||||||||| || |    
T  28423565 ttgtaacatggatgaacattttacaga-caatattaatcttcctaactctcatccttctattttgcgtcattgt-agttgttcttagtcaaaaattagtt 28423662  T
Q  182 tttcgggctacttgatcggattgctccgaaacatacccagaaaatcagaaaaaat-tcaaggatcatgactcccgtagaagggacttctta 271  Q
    |||||||||||||||||||||| ||||||||| || ||||||||| | ||||||| |||||||||| ||||||||||||| ||||||||||    
T  28423663 tttcgggctacttgatcggattactccgaaacttagccagaaaattaaaaaaaatatcaaggatcaagactcccgtagaaaggacttctta 28423753  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #17
Raw Score: 94; E-Value: 1e-45
Query Start/End: Original strand, 82 - 315
Target Start/End: Original strand, 6395228 - 6395459
Alignment:
Q  82 ttgtaacatggatagtcattttagagaacaatattaatcttcctaactctcatcattctgttttgagtcattgttacctgttcttagtcaaaaatcaggt 181  Q
    ||||| |||||||| ||||||||  || ||||||||| |||||||||||||||  |||||||||  |||||||||| |||||| |||||||||||| | |    
T  6395228 ttgtagcatggatattcattttatgga-caatattaaacttcctaactctcattcttctgttttaggtcattgttagctgttcgtagtcaaaaatctgat 6395326  T
Q  182 tttcgggctacttgatcggattgctccgaaacatacccagaaaatcagaaaaaattcaaggatcatgactcccgtagaagggacttcttacattgactct 281  Q
    ||||||||||||||||||||||| || ||||||| ||| ||||||||||| ||| ||||| || | |||||| ||||||| || |||||||  |||| ||    
T  6395327 tttcgggctacttgatcggattgttctgaaacatcccctgaaaatcagaacaaaatcaagtattaagactcctgtagaagagatttcttac-gtgacgct 6395425  T
Q  282 gcccctcaaaataaaaaattacatcatttagacc 315  Q
    ||||||||||||  ||||||  ||||||||||||    
T  6395426 gcccctcaaaatccaaaattcaatcatttagacc 6395459  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #18
Raw Score: 74; E-Value: 8e-34
Query Start/End: Original strand, 82 - 250
Target Start/End: Original strand, 21004528 - 21004695
Alignment:
Q  82 ttgtaacatggatagtcattttagagaacaatattaatcttcctaactctcatcattctgttttgagtcattgttacctgttcttagtcaaaaatcaggt 181  Q
    |||||||||| |||| |||||||| || |||||||||||||| ||||||| ||| || ||||||| ||||||||||| |||||||||||||||||| |||    
T  21004528 ttgtaacatgtatagccattttaggga-caatattaatcttcataactcttatccttttgttttgggtcattgttacatgttcttagtcaaaaatcgggt 21004626  T
Q  182 tttcgggctacttgatcggattgctccgaaacat-acccagaaaatcagaaaaaattcaaggatcatgac 250  Q
    |||| |||||||||||| |||||||| ||||| |  || | |||||||| ||||||||||||| ||||||    
T  21004627 tttccggctacttgatcagattgctctgaaacttctccaaaaaaatcag-aaaaattcaaggaccatgac 21004695  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #19
Raw Score: 74; E-Value: 8e-34
Query Start/End: Original strand, 82 - 271
Target Start/End: Original strand, 36317940 - 36318128
Alignment:
Q  82 ttgtaacatggatagtcattttagagaacaatattaatcttcctaactctcatcattctgttttgagtcattgttacctgttcttagtcaaaaatcaggt 181  Q
    |||||||||||||| |||||||| || |||||||||||||| |||||||| ||| |||  ||||| |||||||||| ||||||||||||| ||||  | |    
T  36317940 ttgtaacatggataatcatttta-aggacaatattaatctttctaactcttatctttcaattttgggtcattgttagctgttcttagtcagaaattcgat 36318038  T
Q  182 tttcgggctacttgatcggattgctccgaaacatacccagaaaatcagaaaaaattcaaggatcatgactcccgtagaagggacttctta 271  Q
    ||||||||||||||||||||| | ||| |||| | |||||||||| || |||||  ||||||||| |||| || |||||  |||||||||    
T  36318039 tttcgggctacttgatcggatagttccaaaactttcccagaaaattaggaaaaaaacaaggatcaagactaccttagaaatgacttctta 36318128  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #20
Raw Score: 72; E-Value: 1e-32
Query Start/End: Original strand, 82 - 213
Target Start/End: Original strand, 40392680 - 40392810
Alignment:
Q  82 ttgtaacatggatagtcattttagagaacaatattaatcttcctaactctcatcattctgttttgagtcattgttacctgttcttagtcaaaaatcaggt 181  Q
    |||||||||||||||||||||||  || |||||||||||||||||||||| ||| || || |||| ||||||||||  ||||||||||||||||||| ||    
T  40392680 ttgtaacatggatagtcattttatgga-caatattaatcttcctaactcttatctttatgatttgggtcattgttagttgttcttagtcaaaaatcaagt 40392778  T
Q  182 tttcgggctacttgatcggattgctccgaaac 213  Q
    ||||  |||||||||||||||| |||||||||    
T  40392779 tttcaagctacttgatcggatttctccgaaac 40392810  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #21
Raw Score: 71; E-Value: 5e-32
Query Start/End: Original strand, 82 - 272
Target Start/End: Original strand, 34645521 - 34645713
Alignment:
Q  82 ttgtaacatggatagtcattttagagaacaatattaatcttcctaactctcatcattctgttttgagtcattgttacctgttcttagtcaaaaatcaggt 181  Q
    ||||||||| ||||||||||||| || | ||| ||||| || |||||||||||| ||||||||||  |||||||||| |||||||||||||| ||| |||    
T  34645521 ttgtaacatagatagtcatttta-aggataattttaatttttctaactctcatccttctgttttggatcattgttacatgttcttagtcaaacatccggt 34645619  T
Q  182 tttcgggctacttgatcggattgctccgaaacatacccagaaaatcag--aaaaaat-tcaaggatcatgactcccgtagaagggacttcttac 272  Q
    |||||||||||||||||  ||||||||||||  | |||  ||||||||  ||||||| |||||||||| ||| ||| ||||| | |||||||||    
T  34645620 tttcgggctacttgatcacattgctccgaaattttccccaaaaatcaggaaaaaaatatcaaggatcaagacacccttagaatgaacttcttac 34645713  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #22
Raw Score: 62; E-Value: 1e-26
Query Start/End: Original strand, 109 - 269
Target Start/End: Original strand, 1076725 - 1076883
Alignment:
Q  109 acaatattaatcttcctaactctcatcattctgttttgagtcattgttacctgttcttagtcaaaaatcaggttttcgggctacttgatcggattgctcc 208  Q
    ||||||||||||||| || ||||||||||| |||||||  |||||||||  ||||||| |||||||||| | ||||||||||||||||| |||||||| |    
T  1076725 acaatattaatcttcatagctctcatcattttgttttgcatcattgttagttgttcttggtcaaaaatctgattttcgggctacttgattggattgcttc 1076824  T
Q  209 gaaacatacccagaaaatcagaaaaaattcaaggatcatgactcccgtagaagggacttct 269  Q
    ||||| | || | ||||| |||||||   ||||||||| ||||||  || |||||||||||    
T  1076825 gaaacttcccaaaaaaattagaaaaa--ccaaggatcaagactcctttaaaagggacttct 1076883  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #23
Raw Score: 54; E-Value: 7e-22
Query Start/End: Original strand, 82 - 207
Target Start/End: Complemental strand, 4259650 - 4259528
Alignment:
Q  82 ttgtaacatggatagtcattttagagaacaatattaatcttcctaactctcatcattctgttttgagtcattgttacctgttcttagtcaaaaatcaggt 181  Q
    ||||||||| |||||||||||||  || |||||||||||||||||||| ||||| |||| ||| || |||||||||  ||||||||||||||| || |||    
T  4259650 ttgtaacattgatagtcattttatgga-caatattaatcttcctaactatcatccttct-tttcga-tcattgttagttgttcttagtcaaaactctggt 4259554  T
Q  182 tttcgggctacttgatcggattgctc 207  Q
    |||||||||||| |||||| ||||||    
T  4259553 tttcgggctactagatcggcttgctc 4259528  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #24
Raw Score: 52; E-Value: 1e-20
Query Start/End: Original strand, 82 - 314
Target Start/End: Original strand, 7981658 - 7981890
Alignment:
Q  82 ttgtaacatggatagtcattttagagaacaatattaatcttcctaactctcatcattctgttttgagtcattgttacctgttcttagtcaaaaatcaggt 181  Q
    |||||||||||||| | |||||| || ||||| ||||  |||||||| |||||| |||||||||| || |||||||  |||| ||| | ||||||    |    
T  7981658 ttgtaacatggatatttatttta-aggacaatgttaagtttcctaaccctcatccttctgttttgggttattgttagttgttattaattaaaaatgcaat 7981756  T
Q  182 tttcgggctacttgatcggattgctccgaaacatacccagaaaatcag--aaaaaattcaaggatcatgactcccgtagaagggacttcttacattgact 279  Q
    |||| |||||||||||||||||||| |||||| | | | |||||||||  |||||| ||||| |||| ||||||| ||||||||| || ||| |  ||||    
T  7981757 tttcaggctacttgatcggattgcttcgaaacttcctccgaaaatcaggaaaaaaaatcaagcatcaagactcccttagaagggatttgttata-ggact 7981855  T
Q  280 ctgcccctcaaaataaaaaattacatcatttagac 314  Q
      ||||||||||||  |||||| |||| |||||||    
T  7981856 tcgcccctcaaaatccaaaattccatcgtttagac 7981890  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #25
Raw Score: 48; E-Value: 3e-18
Query Start/End: Original strand, 109 - 262
Target Start/End: Complemental strand, 10840746 - 10840589
Alignment:
Q  109 acaatattaatcttcctaactctcatcattctgttttgagtcattgttacctgttcttagtcaaaaatcaggttttcggg-ctacttgatcggattgctc 207  Q
    ||||||||||||||||||||||||||| |||||  ||  ||| ||||||  ||| |  | |||||||||||||||||||  |||||||||| | ||||||    
T  10840746 acaatattaatcttcctaactctcatccttctggattaggtccttgttagttgtccc-actcaaaaatcaggttttcggatctacttgatcag-ttgctc 10840649  T
Q  208 cgaaacatacccagaaaatcagaa-----aaaattcaaggatcatgactcccgtagaagg 262  Q
    |||||| | |||||||||||||||     ||||  |||||||||||||||||||||||||    
T  10840648 cgaaacttccccagaaaatcagaagaaaaaaaaaccaaggatcatgactcccgtagaagg 10840589  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #26
Raw Score: 44; E-Value: 7e-16
Query Start/End: Original strand, 82 - 145
Target Start/End: Original strand, 33472215 - 33472277
Alignment:
Q  82 ttgtaacatggatagtcattttagagaacaatattaatcttcctaactctcatcattctgtttt 145  Q
    ||||||||||||||||||||||| || ||||||||||||||||||||||||||| || ||||||    
T  33472215 ttgtaacatggatagtcatttta-aggacaatattaatcttcctaactctcatccttgtgtttt 33472277  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #27
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 82 - 145
Target Start/End: Complemental strand, 10833530 - 10833468
Alignment:
Q  82 ttgtaacatggatagtcattttagagaacaatattaatcttcctaactctcatcattctgtttt 145  Q
    ||||||||||||||||||||||| || ||||||||||||||||||||| ||||| || ||||||    
T  10833530 ttgtaacatggatagtcatttta-aggacaatattaatcttcctaactttcatccttttgtttt 10833468  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #28
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 82 - 145
Target Start/End: Original strand, 33472422 - 33472484
Alignment:
Q  82 ttgtaacatggatagtcattttagagaacaatattaatcttcctaactctcatcattctgtttt 145  Q
    ||||||||||||||||||||||| || ||||||||||||||||||||| ||||| || ||||||    
T  33472422 ttgtaacatggatagtcatttta-aggacaatattaatcttcctaactatcatccttgtgtttt 33472484  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #29
Raw Score: 39; E-Value: 0.0000000000006
Query Start/End: Original strand, 82 - 132
Target Start/End: Original strand, 9845330 - 9845379
Alignment:
Q  82 ttgtaacatggatagtcattttagagaacaatattaatcttcctaactctc 132  Q
    ||||||||||||||||||||||| || ||||||||||||||||||||||||    
T  9845330 ttgtaacatggatagtcatttta-aggacaatattaatcttcctaactctc 9845379  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #30
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 148 - 213
Target Start/End: Complemental strand, 8621587 - 8621522
Alignment:
Q  148 gtcattgttacctgttcttagtcaaaaatcaggttttcgggctacttgatcggattgctccgaaac 213  Q
    ||||||||||  ||||||||||||||||||   |||| | ||||||||||||||||||||||||||    
T  8621587 gtcattgttagttgttcttagtcaaaaatccaatttttgagctacttgatcggattgctccgaaac 8621522  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #31
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 82 - 135
Target Start/End: Complemental strand, 31234533 - 31234481
Alignment:
Q  82 ttgtaacatggatagtcattttagagaacaatattaatcttcctaactctcatc 135  Q
    ||||||||||||||||||||||| || |||||||||||||||||||||| ||||    
T  31234533 ttgtaacatggatagtcatttta-aggacaatattaatcttcctaactcccatc 31234481  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #32
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 82 - 134
Target Start/End: Original strand, 16310743 - 16310794
Alignment:
Q  82 ttgtaacatggatagtcattttagagaacaatattaatcttcctaactctcat 134  Q
    |||||||||| ||||||||||||| || |||||||||||||||||||||||||    
T  16310743 ttgtaacatgaatagtcattttaggga-caatattaatcttcctaactctcat 16310794  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #33
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 82 - 134
Target Start/End: Original strand, 37248702 - 37248753
Alignment:
Q  82 ttgtaacatggatagtcattttagagaacaatattaatcttcctaactctcat 134  Q
    |||| ||||||||||||||||||| || |||||||||||||||||||||||||    
T  37248702 ttgttacatggatagtcattttaggga-caatattaatcttcctaactctcat 37248753  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #34
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 82 - 130
Target Start/End: Original strand, 40994936 - 40994983
Alignment:
Q  82 ttgtaacatggatagtcattttagagaacaatattaatcttcctaactc 130  Q
    |||||||||||||||||||||||| | ||||||||||||||||||||||    
T  40994936 ttgtaacatggatagtcattttag-ggacaatattaatcttcctaactc 40994983  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #35
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 76 - 126
Target Start/End: Original strand, 24627712 - 24627761
Alignment:
Q  76 atatgcttgtaacatggatagtcattttagagaacaatattaatcttccta 126  Q
    ||||| ||||||||||||||||||||||| || ||||||||||||||||||    
T  24627712 atatgtttgtaacatggatagtcatttta-aggacaatattaatcttccta 24627761  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #36
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 82 - 272
Target Start/End: Original strand, 1374084 - 1374277
Alignment:
Q  82 ttgtaacatggatagtcattttagagaacaatattaatcttcctaactctcatcattctgttttgagtcattgttacctgttcttagtcaaaaatcaggt 181  Q
    |||||| |||||||||||  ||| ||||| ||||||||| | |||||||||||| || ||||||  ||||||||||  |||| | | ||||||||  ||     
T  1374084 ttgtaatatggatagtcagatta-agaactatattaatcattctaactctcatccttatgttttaggtcattgttagttgttttcattcaaaaatttgga 1374182  T
Q  182 tttcgggctacttgatcggattgctccgaaacatacccagaaaatcaga----aaaaattcaaggatcatgactcccgtagaagggacttcttac 272  Q
    |||| | ||||||||||  |||||||| |||| |  ||| ||||| |||    ||||| |||||||||| ||||||| || |||| |||| ||||    
T  1374183 tttcagactacttgatcaaattgctccaaaacttttccaaaaaattagaagggaaaaaatcaaggatcaagactcccctaaaaggaactttttac 1374277  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #37
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 82 - 126
Target Start/End: Original strand, 41530819 - 41530862
Alignment:
Q  82 ttgtaacatggatagtcattttagagaacaatattaatcttccta 126  Q
    ||||||||||||||||||||| | || ||||||||||||||||||    
T  41530819 ttgtaacatggatagtcatttca-aggacaatattaatcttccta 41530862  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5 (Bit Score: 156; Significance: 1e-82; HSPs: 50)
Name: chr5
Description:

Target: chr5; HSP #1
Raw Score: 156; E-Value: 1e-82
Query Start/End: Original strand, 82 - 317
Target Start/End: Complemental strand, 32841986 - 32841753
Alignment:
Q  82 ttgtaacatggatagtcattttagagaacaatattaatcttcctaactctcatcattctgttttgagtcattgttacctgttcttagtcaaaaatcaggt 181  Q
    |||||||||||||||||||||||| ||||||||||||||||||||||||||||| |||| ||||||||||||||||| ||||| |||||||||||| |||    
T  32841986 ttgtaacatggatagtcattttagggaacaatattaatcttcctaactctcatccttctattttgagtcattgttacatgttcgtagtcaaaaatcgggt 32841887  T
Q  182 tttcgggctacttgatcggattgctccgaaacatacccagaaaatcagaaaaaattcaaggatcatgactcccgtagaagggacttcttacattgactct 281  Q
    ||||||||||||||||||||||||||||||| || |||||||||||||||||||||||||||||||||||||| ||||||||||||||||    |||||     
T  32841886 tttcgggctacttgatcggattgctccgaaa-attcccagaaaatcagaaaaaattcaaggatcatgactcccctagaagggacttctta-tgggactcc 32841789  T
Q  282 gcccctcaaaataaaaaattacatcatttagaccca 317  Q
    ||||||||||||  |||||| |||| ||||||||||    
T  32841788 gcccctcaaaatccaaaattccatcgtttagaccca 32841753  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #2
Raw Score: 149; E-Value: 1e-78
Query Start/End: Original strand, 82 - 317
Target Start/End: Complemental strand, 31929139 - 31928907
Alignment:
Q  82 ttgtaacatggatagtcattttagagaacaatattaatcttcctaactctcatcattctgttttgagtcattgttacctgttcttagtcaaaaatcaggt 181  Q
    ||||||||||||||||||||||||   ||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||| ||||| |||||    
T  31929139 ttgtaacatggatagtcattttagg--acaatattaatcttcctaactctcatccttctgttttgagtcattgttacctgttcttagttaaaaaccaggt 31929042  T
Q  182 tttcgggctacttgatcggattgctccgaaacatacccagaaaatcagaaaaaattcaaggatcatgactcccgtagaagggacttcttacattgactct 281  Q
    |||||||||||||||||||||||||||||||| | ||||||||||||||||||||||||||| |||||||||| ||||||||||||||| |   |||||     
T  31929041 tttcgggctacttgatcggattgctccgaaacttccccagaaaatcagaaaaaattcaaggaccatgactcccttagaagggacttcttgc-gggactcc 31928943  T
Q  282 gcccctcaaaataaaaaattacatcatttagaccca 317  Q
    |||| |||||||  |||||| |||| ||||||||||    
T  31928942 gcccttcaaaatccaaaatttcatcgtttagaccca 31928907  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #3
Raw Score: 146; E-Value: 9e-77
Query Start/End: Original strand, 76 - 317
Target Start/End: Complemental strand, 37183802 - 37183563
Alignment:
Q  76 atatgcttgtaacatggatagtcattttagagaacaatattaatcttcctaactctcatcattctgttttgagtcattgttacctgttcttagtcaaaaa 175  Q
    ||||| |||||||||||||||||||||||  || |||||||||||||||||||||||||| || ||||||| ||||||||||| ||||||||||||||||    
T  37183802 atatgtttgtaacatggatagtcattttatgga-caatattaatcttcctaactctcatctttttgttttgggtcattgttacttgttcttagtcaaaaa 37183704  T
Q  176 tcaggttttcgggctacttgatcggattgctccgaaacatacccagaaaatcagaaaaaattcaaggatcatgactcccgtagaagggacttcttacatt 275  Q
    || ||||||| | ||||||||||||||||||||||||||| |||| |||||||||||||||||||||| ||||||||||||||||||||| ||||||       
T  37183703 tcgggttttcagactacttgatcggattgctccgaaacatccccataaaatcagaaaaaattcaaggaccatgactcccgtagaagggacatcttac-gg 37183605  T
Q  276 gactctgcccctcaaaataaaaaattacatcatttagaccca 317  Q
    ||||| ||||||||||||  |||||| |||||||||||||||    
T  37183604 gactccgcccctcaaaatccaaaattccatcatttagaccca 37183563  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #4
Raw Score: 140; E-Value: 3e-73
Query Start/End: Original strand, 82 - 317
Target Start/End: Original strand, 6156837 - 6157070
Alignment:
Q  82 ttgtaacatggatagtcattttagagaacaatattaatcttcctaactctcatcattctgttttgagtcattgttacctgttcttagtcaaaaatcaggt 181  Q
    |||||||||||||||||||||||| || |||||||||||||||||||||||||| |||||||||  ||||||||||| |||||||||| ||||| | |||    
T  6156837 ttgtaacatggatagtcattttaggga-caatattaatcttcctaactctcatccttctgtttttggtcattgttacatgttcttagttaaaaaccgggt 6156935  T
Q  182 tttcgggctacttgatcggattgctccgaaacatacccagaaaatcagaaaaaattcaaggatcatgactcccgtagaagggacttcttacattgactct 281  Q
    ||| |||||||||||||||||||||||||||| | ||||||||||||||||||||||||||| |||||||||||||| |||||||||||||   |||||     
T  6156936 ttttgggctacttgatcggattgctccgaaactttcccagaaaatcagaaaaaattcaaggaccatgactcccgtagtagggacttcttac-gggactcc 6157034  T
Q  282 gcccctcaaaataaaaaattacatcatttagaccca 317  Q
    ||||||||||||  |||||| |||| ||||||||||    
T  6157035 gcccctcaaaatccaaaattccatcgtttagaccca 6157070  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #5
Raw Score: 134; E-Value: 1e-69
Query Start/End: Original strand, 82 - 315
Target Start/End: Complemental strand, 31221354 - 31221123
Alignment:
Q  82 ttgtaacatggatagtcattttagagaacaatattaatcttcctaactctcatcattctgttttgagtcattgttacctgttcttagtcaaaaatcaggt 181  Q
    |||||||||||||||||||||||| || |||||||||||||||||||||||||| |||||||||| ||||||||||| |||||||||| |||||   |||    
T  31221354 ttgtaacatggatagtcattttaggga-caatattaatcttcctaactctcatctttctgttttgggtcattgttacatgttcttagttaaaaactgggt 31221256  T
Q  182 tttcgggctacttgatcggattgctccgaaacatacccagaaaatcagaaaaaattcaaggatcatgactcccgtagaagggacttcttacattgactct 281  Q
    |||||||||||||||||||||||||||||||| | ||||||||||||||||||||||||||| | ||||| || |||||||||||||||||   |||||     
T  31221255 tttcgggctacttgatcggattgctccgaaacttccccagaaaatcagaaaaaattcaaggaccgtgacttccatagaagggacttcttac-gagactcc 31221157  T
Q  282 gcccctcaaaataaaaaattacatcatttagacc 315  Q
    ||||||||||||  |||||| |||| ||||||||    
T  31221156 gcccctcaaaatccaaaatttcatcgtttagacc 31221123  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #6
Raw Score: 132; E-Value: 2e-68
Query Start/End: Original strand, 111 - 314
Target Start/End: Complemental strand, 26898790 - 26898588
Alignment:
Q  111 aatattaatcttcctaactctcatcattctgttttgagtcattgttacctgttcttagtcaaaaatcaggttttcgggctacttgatcggattgctccga 210  Q
    ||||||||||||||||||||||||| |||||||||||||||||||||  ||||||||||||||||||  |||||||||||||||||||||||||||||||    
T  26898790 aatattaatcttcctaactctcatccttctgttttgagtcattgttatatgttcttagtcaaaaatcgagttttcgggctacttgatcggattgctccga 26898691  T
Q  211 aacatacccagaaaatcagaaaaaattcaaggatcatgactcccgtagaagggacttcttacattgactctgcccctcaaaataaaaaattacatcattt 310  Q
    ||| | |||| |||||||||||||||||||||| ||||||||| |||||||||||||||||||  ||||| ||||||||||||  |||||| |||| |||    
T  26898690 aacttgcccaaaaaatcagaaaaaattcaaggaccatgactcctgtagaagggacttcttaca-ggactccgcccctcaaaatccaaaatttcatcgttt 26898592  T
Q  311 agac 314  Q
    ||||    
T  26898591 agac 26898588  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #7
Raw Score: 127; E-Value: 2e-65
Query Start/End: Original strand, 82 - 272
Target Start/End: Original strand, 20891719 - 20891907
Alignment:
Q  82 ttgtaacatggatagtcattttagagaacaatattaatcttcctaactctcatcattctgttttgagtcattgttacctgttcttagtcaaaaatcaggt 181  Q
    |||||||||||||||||||||||| ||  ||||||||||||||||||||||||| |||||||||| || |||||||||| |||||||||||||||| |||    
T  20891719 ttgtaacatggatagtcattttagggat-aatattaatcttcctaactctcatccttctgttttgggttattgttacctattcttagtcaaaaatcgggt 20891817  T
Q  182 tttcgggctacttgatcggattgctccgaaacatacccagaaaatcagaaaaaattcaaggatcatgactcccgtagaagggacttcttac 272  Q
    |||| ||||||||||||||||||||||||||| | ||||||||| |||||||||||||||||||||||||||| || ||||||||||||||    
T  20891818 tttcaggctacttgatcggattgctccgaaacttccccagaaaa-cagaaaaaattcaaggatcatgactcccctacaagggacttcttac 20891907  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #8
Raw Score: 123; E-Value: 5e-63
Query Start/End: Original strand, 76 - 317
Target Start/End: Original strand, 14111967 - 14112204
Alignment:
Q  76 atatgcttgtaacatggatagtcattttagagaacaatattaatcttcctaactctcatcattctgttttgagtcattgttacctgttcttagtcaaaaa 175  Q
    ||||| |||||||||||||||||||||||| || |||||||||||||||||||| ||||| || |  |||| || |||||||| ||||||||||||||||    
T  14111967 atatgtttgtaacatggatagtcattttaggga-caatattaatcttcctaactttcatccttat--tttgggttattgttacttgttcttagtcaaaaa 14112063  T
Q  176 tcaggttttcgggctacttgatcggattgctccgaaacatacccagaaaatcagaaaaaattcaaggatcatgactcccgtagaagggacttcttacatt 275  Q
    || ||||||||| ||||||||| ||||||||||||||| | ||||||||||||||||||||||||||| ||||| |||| |||||||||||||||||       
T  14112064 tcgggttttcggactacttgataggattgctccgaaacttccccagaaaatcagaaaaaattcaaggaccatgaatcccatagaagggacttcttac-gg 14112162  T
Q  276 gactctgcccctcaaaataaaaaattacatcatttagaccca 317  Q
    ||||| ||||||||||||  |||||| |||| ||||||||||    
T  14112163 gactccgcccctcaaaatccaaaattccatcgtttagaccca 14112204  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #9
Raw Score: 123; E-Value: 5e-63
Query Start/End: Original strand, 82 - 272
Target Start/End: Original strand, 38871777 - 38871966
Alignment:
Q  82 ttgtaacatggatagtcattttagagaacaatattaatcttcctaactctcatcattctgttttgagtcattgttacctgttcttagtcaaaaatcaggt 181  Q
    |||||||||||||||||||||||| || ||||| |||||||||||||||||||| |||||||||| |||||||||||||||||||||||||||||| |||    
T  38871777 ttgtaacatggatagtcattttaggga-caataataatcttcctaactctcatccttctgttttgggtcattgttacctgttcttagtcaaaaatcgggt 38871875  T
Q  182 tttcgggctacttgatcggattgctccgaaacatacccagaaaatcagaaaaaattcaaggatcatgactcccgtagaagggacttcttac 272  Q
    |||| | |||||| |||||||||||||||||| | ||||||||||||||||||||||||||| | ||||||||  ||||| ||||||||||    
T  38871876 tttcagactacttaatcggattgctccgaaactttcccagaaaatcagaaaaaattcaaggaccgtgactcccaaagaagagacttcttac 38871966  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #10
Raw Score: 122; E-Value: 2e-62
Query Start/End: Original strand, 82 - 270
Target Start/End: Original strand, 33487716 - 33487904
Alignment:
Q  82 ttgtaacatggatagtcattttagagaacaatattaatcttcctaactctcatcattctgtttt-gagtcattgttacctgttcttagtcaaaaatcagg 180  Q
    |||||||||||||||||||||||| || |||||||||||||||||||||||||| ||| ||||| | ||||||||||| ||||||||||||||||||  |    
T  33487716 ttgtaacatggatagtcattttaggga-caatattaatcttcctaactctcatccttcagtttttgggtcattgttacatgttcttagtcaaaaatcgag 33487814  T
Q  181 ttttcgggctacttgatcggattgctccgaaacatacccagaaaatcagaaaaaattcaaggatcatgactcccgtagaagggacttctt 270  Q
    |||||||||||||||||||  |||||||||||| | ||||||||||||||||||| |||||||||||||||||| |||||||||||||||    
T  33487815 ttttcgggctacttgatcgatttgctccgaaacttccccagaaaatcagaaaaaagtcaaggatcatgactcccttagaagggacttctt 33487904  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #11
Raw Score: 118; E-Value: 5e-60
Query Start/End: Original strand, 82 - 315
Target Start/End: Original strand, 39524882 - 39525113
Alignment:
Q  82 ttgtaacatggatagtcattttagagaacaatattaatcttcctaactctcatcattctgttttgagtcattgttacctgttcttagtcaaaaatcaggt 181  Q
    |||||| ||| ||||||||||||| ||||||||||||||||||||||||||||| |||||||||| ||||||||||| ||||||||||| |||||  |||    
T  39524882 ttgtaatatgtatagtcattttag-gaacaatattaatcttcctaactctcatccttctgttttgggtcattgttacttgttcttagtccaaaattgggt 39524980  T
Q  182 tttcgggctacttgatcggattgctccgaaacatacccagaaaatcagaaaaaattcaaggatcatgactcccgtagaagggacttcttacattgactct 281  Q
    |||||  |||||||||| |||||||||||||  | ||||||||||||||||||||||||||| |||||||||| ||||||| |||||||     ||||||    
T  39524981 tttcgaactacttgatcagattgctccgaaatttccccagaaaatcagaaaaaattcaaggaccatgactcccttagaaggaacttctt-gtgggactct 39525079  T
Q  282 gcccctcaaaataaaaaattacatcatttagacc 315  Q
    ||||||||||||  |||||| |||| ||||||||    
T  39525080 gcccctcaaaatccaaaattccatcgtttagacc 39525113  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #12
Raw Score: 115; E-Value: 3e-58
Query Start/End: Original strand, 76 - 317
Target Start/End: Original strand, 7884293 - 7884533
Alignment:
Q  76 atatgcttgtaacatggatagtcattttagagaacaatattaatcttcctaactctcatcattctgttttgagtcattgttacctgttcttagtcaaaaa 175  Q
    ||||| |||||| ||| || |||||||||| || |||||||||||||||||||||||||| |||||||||| ||||||||||| ||||||||||||| ||    
T  7884293 atatgtttgtaatatgtattgtcattttaggga-caatattaatcttcctaactctcatccttctgttttgggtcattgttacatgttcttagtcaagaa 7884391  T
Q  176 tcaggttttcgggctacttgatcggattgctccgaaacataccc-agaaaatcagaaaaaattcaaggatcatgactcccgtagaagggacttcttacat 274  Q
    || | ||||||||||||||||||||||||||||||||| | ||| | |||||||||||| ||||||||| ||||||||||||||||| ||||||||||      
T  7884392 tcggattttcgggctacttgatcggattgctccgaaacttcccctataaaatcagaaaacattcaaggaccatgactcccgtagaagagacttcttac-g 7884490  T
Q  275 tgactctgcccctcaaaataaaaaattacatcatttagaccca 317  Q
      |||| ||||||||||||  |||||| |||  ||||||||||    
T  7884491 gaactccgcccctcaaaatctaaaatttcattgtttagaccca 7884533  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #13
Raw Score: 114; E-Value: 1e-57
Query Start/End: Original strand, 82 - 271
Target Start/End: Original strand, 15957855 - 15958043
Alignment:
Q  82 ttgtaacatggatagtcattttagagaacaatattaatcttcctaactctcatcattctgttttgagtcattgttacctgttcttagtcaaaaatcaggt 181  Q
    ||||||||| |||||| ||||||| || ||||||||||||||||||||||  |  || ||||||| |||||| |||||||||||||||||||||||||||    
T  15957855 ttgtaacatagatagtaattttaggga-caatattaatcttcctaactctggttcttttgttttgggtcattattacctgttcttagtcaaaaatcaggt 15957953  T
Q  182 tttcgggctacttgatcggattgctccgaaacatacccagaaaatcagaaaaaattcaaggatcatgactcccgtagaagggacttctta 271  Q
    |||||| ||||||||||||||||||||||||| | ||||||||||||||||||||||||||| ||| |||||| |||||| |||||||||    
T  15957954 tttcggactacttgatcggattgctccgaaacttccccagaaaatcagaaaaaattcaaggaccataactcccttagaagcgacttctta 15958043  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #14
Raw Score: 114; E-Value: 1e-57
Query Start/End: Original strand, 82 - 314
Target Start/End: Complemental strand, 38692798 - 38692567
Alignment:
Q  82 ttgtaacatggatagtcattttagagaacaatattaatcttcctaactctcatcattctgttttgagtcattgttacctgttcttagtcaaaaatcaggt 181  Q
    |||||||||||||| |||||||| || ||||||||||| ||| ||||||||||| |||||||||| ||||||||||||  |||||||||||||||| |||    
T  38692798 ttgtaacatggataatcatttta-aggacaatattaatattcataactctcatctttctgttttgggtcattgttacccattcttagtcaaaaatcgggt 38692700  T
Q  182 tttcgggctacttgatcggattgctccgaaacatacccagaaaatcagaaaaaattcaaggatcatgactcccgta-gaagggacttcttacattgactc 280  Q
    |||||| ||||||| ||||||||||||||||| | |||| |||||||||||||||||||||| |||||||||| || |||||||||||||||   |||||    
T  38692699 tttcggactacttggtcggattgctccgaaacttccccaaaaaatcagaaaaaattcaaggaccatgactcccttaggaagggacttcttac-gggactc 38692601  T
Q  281 tgcccctcaaaataaaaaattacatcatttagac 314  Q
     ||||||||||||  ||||||  ||| |||||||    
T  38692600 cgcccctcaaaatccaaaattctatcgtttagac 38692567  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #15
Raw Score: 111; E-Value: 7e-56
Query Start/End: Original strand, 82 - 268
Target Start/End: Original strand, 15799331 - 15799516
Alignment:
Q  82 ttgtaacatggatagtcattttagagaacaatattaatcttcctaactctcatcattctgttttgagtcattgttacctgttcttagtcaaaaatcaggt 181  Q
    |||||||||||||||||||||||  || |||||||| ||||||||| || |||| |||||||||| ||||||||||| |||||||||||||||||| |||    
T  15799331 ttgtaacatggatagtcattttatgga-caatattattcttcctaattcgcatccttctgttttgggtcattgttacatgttcttagtcaaaaatcgggt 15799429  T
Q  182 tttcgggctacttgatcggattgctccgaaacatacccagaaaatcagaaaaaattcaaggatcatgactcccgtagaagggacttc 268  Q
    || |||||||||||| |||||||||||||||| | |||||||||||| |||||||||||||| |||| ||||| |||||||||||||    
T  15799430 ttccgggctacttgaccggattgctccgaaacttgcccagaaaatcaaaaaaaattcaaggaccatgcctcccctagaagggacttc 15799516  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #16
Raw Score: 108; E-Value: 4e-54
Query Start/End: Original strand, 82 - 261
Target Start/End: Complemental strand, 28083393 - 28083215
Alignment:
Q  82 ttgtaacatggatagtcattttagagaacaatattaatcttcctaactctcatcattctgttttgagtcattgttacctgttcttagtcaaaaatcaggt 181  Q
    |||||||||||||||||||||||| || ||||||||||||| |||||| ||||| |||||||||  |||||||||||||||||||||  |||||||  ||    
T  28083393 ttgtaacatggatagtcattttaggga-caatattaatctttctaactttcatccttctgtttttggtcattgttacctgttcttaggaaaaaatcgagt 28083295  T
Q  182 tttcgggctacttgatcggattgctccgaaacatacccagaaaatcagaaaaaattcaaggatcatgactcccgtagaag 261  Q
    |||||| |||||||||||||||||||||| || | ||||||||||||||||||||||||||| |||||||||| ||||||    
T  28083294 tttcggactacttgatcggattgctccgatacttccccagaaaatcagaaaaaattcaaggaccatgactcccttagaag 28083215  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #17
Raw Score: 108; E-Value: 4e-54
Query Start/End: Original strand, 78 - 317
Target Start/End: Complemental strand, 40620009 - 40619767
Alignment:
Q  78 atgcttgtaacatggatagtcattttagagaacaatattaatcttcctaactctcatca-ttctgttttgagtcattgttacctgttctta----gtcaa 172  Q
    |||||||||||||||| | ||||||||| || ||||||||||||||||||||||||||  |||||||||| ||||||||||||||||||||    |||||    
T  40620009 atgcttgtaacatggacaatcattttaggga-caatattaatcttcctaactctcatcccttctgttttgggtcattgttacctgttcttaattagtcaa 40619911  T
Q  173 aaatcaggttttcgggctacttgatcggattgctccgaaacatacccagaaaatcagaaaaaattcaaggatcatgactcccgtagaagggacttcttac 272  Q
    ||||| ||||| ||| ||||||| |||||||| |||||||| | || ||||||||| ||||||||||||||||||||||||   |||||| |||||||||    
T  40619910 aaatcgggtttccggactacttggtcggattgttccgaaacttccctagaaaatcataaaaaattcaaggatcatgactccaaaagaaggaacttcttac 40619811  T
Q  273 attgactctgcccctcaaaataaaaaattacatcatttagaccca 317  Q
       ||||| ||||||||||||  |||||| |||||||||||||||    
T  40619810 -gggactccgcccctcaaaatccaaaattccatcatttagaccca 40619767  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #18
Raw Score: 106; E-Value: 7e-53
Query Start/End: Original strand, 107 - 316
Target Start/End: Original strand, 27212834 - 27213041
Alignment:
Q  107 gaacaatattaatcttcctaactctcatcattctgttttgagtcattgttacctgttcttagtcaaaaatcaggttttcgggctacttgatcggattgct 206  Q
    ||||||||||||||||||||||||||||| ||||| ||||||||||||||||||||||||||||||||||| ||||||||| ||| ||||| ||||||||    
T  27212834 gaacaatattaatcttcctaactctcatccttctggtttgagtcattgttacctgttcttagtcaaaaatcgggttttcggactatttgattggattgct 27212933  T
Q  207 ccgaaacatacccagaaaatcagaaaaaattcaaggatcatgactcccgtagaagggacttcttacattgactctgcccctcaaaataaaaaattacatc 306  Q
    |||| || | || |||||||||| |||||||||| |  |||||||||| |||||||||||||||||   ||||| ||||||||||||  |||||| |||     
T  27212934 ccgatacttccctagaaaatcag-aaaaattcaacgtccatgactcccctagaagggacttcttac-gggactccgcccctcaaaatctaaaattccatt 27213031  T
Q  307 atttagaccc 316  Q
     |||||||||    
T  27213032 gtttagaccc 27213041  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #19
Raw Score: 99; E-Value: 1e-48
Query Start/End: Original strand, 82 - 271
Target Start/End: Complemental strand, 24203699 - 24203510
Alignment:
Q  82 ttgtaacatggatagtcattttagagaacaatattaatcttcctaactctcatcattctgttttgagtcattgttacctgttcttagtcaaaaatcaggt 181  Q
    |||||||  ||||| |||||||| || ||||||||||| ||||||||||||| | ||||||||||  ||||||||||||||||||||| ||||||   ||    
T  24203699 ttgtaactgggataatcatttta-aggacaatattaatgttcctaactctcaaccttctgttttggatcattgttacctgttcttagttaaaaattgagt 24203601  T
Q  182 tttcgggctacttgatcggattgctccgaaacatacccagaaaatca-gaaaaaattcaaggatcatgactcccgtagaagggacttctta 271  Q
    |||||||||| ||||||||||||||||||||| | || ||||||||| ||||||||||||||| |||||||||| ||||||||||||||||    
T  24203600 tttcgggctatttgatcggattgctccgaaacttcccaagaaaatcatgaaaaaattcaaggaccatgactcccttagaagggacttctta 24203510  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #20
Raw Score: 95; E-Value: 2e-46
Query Start/End: Original strand, 82 - 315
Target Start/End: Complemental strand, 12465134 - 12464902
Alignment:
Q  82 ttgtaacatggatagtcattttagagaacaatattaatcttcctaactctcatcattctgttttgagtcattgttacctgttcttagtcaaaaatcaggt 181  Q
    |||||| ||| ||||| ||||||| || |||||||||||||| ||||||| ||| || |||||||  |||||||||| |||||||||||||||||| |||    
T  12465134 ttgtaatatgtatagttattttaggga-caatattaatcttcataactcttatccttttgttttggatcattgttacttgttcttagtcaaaaatcgggt 12465036  T
Q  182 tttcgggctacttgatcggattgctccgaaacatacccagaaaatcagaa-aaaattcaaggatcatgactcccgtagaagggacttcttacattgactc 280  Q
    |||| | ||||||||||||||||||| |||||   |||| |||||||||| |||||||||||| |||||||||  ||||||| |||||||||   |||||    
T  12465035 tttcagactacttgatcggattgctctgaaactaccccaaaaaatcagaaaaaaattcaaggaccatgactcctatagaaggaacttcttac-gggactc 12464937  T
Q  281 tgcccctcaaaataaaaaattacatcatttagacc 315  Q
    |||||||||||||  |||||| ||| |||||||||    
T  12464936 tgcccctcaaaatccaaaattccattatttagacc 12464902  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #21
Raw Score: 94; E-Value: 1e-45
Query Start/End: Original strand, 82 - 272
Target Start/End: Original strand, 38372415 - 38372596
Alignment:
Q  82 ttgtaacatggatagtcattttagagaacaatattaatcttcctaactctcatcattctgttttgagtcattgttacctgttcttagtcaaaaatcaggt 181  Q
    |||| ||||||||||||||||||| || ||||||||||||||||||||||||| ||||        ||||||||||| |||||||||| ||||||  |||    
T  38372415 ttgttacatggatagtcattttaggga-caatattaatcttcctaactctcataattc--------gtcattgttacatgttcttagttaaaaattgggt 38372505  T
Q  182 tttcgggctacttgatcggattgctccgaaacatacccagaaaatcagaaaaaattcaaggatcatgactcccgtagaagggacttcttac 272  Q
    ||||||||||||||||||||| |||||||||| | ||||||| ||||||||||||||||||| ||||||| || |||||| ||||||||||    
T  38372506 tttcgggctacttgatcggatcgctccgaaacttccccagaagatcagaaaaaattcaaggaccatgacttccttagaagagacttcttac 38372596  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #22
Raw Score: 88; E-Value: 4e-42
Query Start/End: Original strand, 82 - 232
Target Start/End: Complemental strand, 4064735 - 4064585
Alignment:
Q  82 ttgtaacatggatagtcattttagagaacaatattaatcttcctaactctcatcattctgtttt-gagtcattgttacctgttcttagtcaaaaatcagg 180  Q
    |||||||||||||||||||||||| || |||| ||||||||||||||| ||||| |||| |||| | ||||||||||||||||||||||||||||||       
T  4064735 ttgtaacatggatagtcattttaggga-caatgttaatcttcctaactatcatccttctatttttgggtcattgttacctgttcttagtcaaaaatcgaa 4064637  T
Q  181 ttttcgggctacttgatcggattgctccgaaacatacccagaaaatcagaaa 232  Q
    ||||||||||||||||| ||||||||||||||| | ||||||||||||||||    
T  4064636 ttttcgggctacttgattggattgctccgaaacttccccagaaaatcagaaa 4064585  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #23
Raw Score: 88; E-Value: 4e-42
Query Start/End: Original strand, 82 - 232
Target Start/End: Original strand, 29862718 - 29862868
Alignment:
Q  82 ttgtaacatggatagtcattttagagaacaatattaatcttcctaactctcatcattctgtttt-gagtcattgttacctgttcttagtcaaaaatcagg 180  Q
    |||||||||||||||||||||||| || |||||||||||||||||||| ||||| ||| ||||| | |||||| |||||||||||||||||||||||| |    
T  29862718 ttgtaacatggatagtcattttaggga-caatattaatcttcctaactttcatccttccgtttttgggtcattattacctgttcttagtcaaaaatcaag 29862816  T
Q  181 ttttcgggctacttgatcggattgctccgaaacatacccagaaaatcagaaa 232  Q
    |||||||||||||||||  |||||||||||||| | || |||||||||||||    
T  29862817 ttttcgggctacttgatgtgattgctccgaaacttccctagaaaatcagaaa 29862868  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #24
Raw Score: 81; E-Value: 5e-38
Query Start/End: Original strand, 82 - 272
Target Start/End: Original strand, 13908654 - 13908847
Alignment:
Q  82 ttgtaacatggatagtcattttagagaacaatattaatcttcctaactctcatcattctgttttgagtcattgttacctgttcttagtcaaaaatcaggt 181  Q
    |||||||| ||||||||||||||  || |||||||||||||| ||||  ||||| |||| |||||||||||||||| |||||||| ||||||||||||||    
T  13908654 ttgtaacacggatagtcattttatgga-caatattaatcttcttaaccttcatccttctcttttgagtcattgttagctgttctttgtcaaaaatcaggt 13908752  T
Q  182 tttcgggctacttgatcggattgctccgaaacatacccagaaaatcagaa-aaaat---tcaaggatcatgactcccgtagaagggacttcttac 272  Q
    |||| | |||||||||||||||||||||||| || |||| ||||| |||| |||||   ||||||||||  |||||  |||||||||| ||||||    
T  13908753 tttcagactacttgatcggattgctccgaaatatccccaaaaaattagaataaaataaatcaaggatcaaaactcctatagaagggacgtcttac 13908847  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #25
Raw Score: 75; E-Value: 2e-34
Query Start/End: Original strand, 155 - 317
Target Start/End: Complemental strand, 26190265 - 26190104
Alignment:
Q  155 ttacctgttcttagtcaaaaatcaggttttcgggctacttgatcggattgctccgaaacatacccagaaaatcagaaaaaattcaaggatcatgactccc 254  Q
    ||||||||||||||||||||||| ||||||||| ||||| ||||||||||||| ||||| | |||| ||||||| ||||||||||| || ||||||||||    
T  26190265 ttacctgttcttagtcaaaaatcgggttttcggactactagatcggattgctctgaaacttccccaaaaaatcaaaaaaaattcaacgaccatgactccc 26190166  T
Q  255 gtagaagggacttcttacattgactctgcccctcaaaataaaaaattacatcatttagaccca 317  Q
     ||||||| |||||||| |  ||||| ||||||||||||  |||||| |||  ||||||||||    
T  26190165 ctagaaggaacttctta-agggactccgcccctcaaaatccaaaattccattgtttagaccca 26190104  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #26
Raw Score: 71; E-Value: 5e-32
Query Start/End: Original strand, 82 - 240
Target Start/End: Original strand, 23269443 - 23269600
Alignment:
Q  82 ttgtaacatggatagtcattttagagaacaatattaatcttcctaactctcatcattctgttttgagtcattgttacctgttcttagtcaaaaatcaggt 181  Q
    |||||||||| | | |||||||| || ||||||||||||||||||||||||||  |||| || || || || ||||  |||||||| ||||||||| |||    
T  23269443 ttgtaacatgaacaatcatttta-aggacaatattaatcttcctaactctcattcttctattctgggttatagttagatgttcttattcaaaaatcgggt 23269541  T
Q  182 tttcgggctacttgatcggattgctccgaaacatacccagaaaatcagaaaaaattcaa 240  Q
    ||||||||||||||||||||||||| |||||| | |||||||||||| |||||| ||||    
T  23269542 tttcgggctacttgatcggattgcttcgaaacttccccagaaaatcataaaaaaatcaa 23269600  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #27
Raw Score: 71; E-Value: 5e-32
Query Start/End: Original strand, 82 - 247
Target Start/End: Original strand, 26095198 - 26095363
Alignment:
Q  82 ttgtaacatggatagtcattttagagaacaatattaatcttcctaactctcatcattctgttttgagtcattgttacctgttcttagtcaaaaatcaggt 181  Q
    ||||||||||||||||||| |||  || |||||||||||||| ||||||||||  |||| ||||| |||||||||  ||||| | ||| ||||||| |||    
T  26095198 ttgtaacatggatagtcatattatgga-caatattaatcttcttaactctcattcttctattttgtgtcattgttggctgttttcagtaaaaaatcgggt 26095296  T
Q  182 tttcgggctacttgatcggattgctccgaaacatacccagaaaatcag-aaaaaattcaaggatcat 247  Q
    ||| |||||||||| || |||||||||||||| | ||||||||||||| |||||| |||||||||||    
T  26095297 ttttgggctacttgttcagattgctccgaaacttccccagaaaatcagaaaaaaaatcaaggatcat 26095363  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #28
Raw Score: 68; E-Value: 3e-30
Query Start/End: Original strand, 86 - 317
Target Start/End: Original strand, 27158194 - 27158423
Alignment:
Q  86 aacatggatagtcattttagagaacaatattaatcttcctaactctcatcattctgttttgagtcattgttacctgttcttagtcaaaaatcaggttttc 185  Q
    ||||||||||||||||||| || |||||||||| ||||||||  |||||| |||  ||||| |||||| |||  |||| ||| | ||||||  |||||||    
T  27158194 aacatggatagtcatttta-aggacaatattaagcttcctaatcctcatccttcacttttgggtcattattagttgttattaataaaaaattcggttttc 27158292  T
Q  186 gggctacttgatcggattgctccgaaacatacccagaaaatcagaaaaaattcaaggatcatgactcccgtagaagggacttcttacattgactctgccc 285  Q
     |||||||||||| |||||||||||||| | ||||||||||||| ||||| |||||||||| || || ||||  ||  ||||| ||| | || || ||||    
T  27158293 aggctacttgatcagattgctccgaaactttcccagaaaatcaggaaaaaatcaaggatcaagattctcgtaagagaaacttcatac-tggattccgccc 27158391  T
Q  286 ctcaaaataaaaaattacatcatttagaccca 317  Q
    ||||||||  |||||| |||| ||||||||||    
T  27158392 ctcaaaatccaaaattccatcgtttagaccca 27158423  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #29
Raw Score: 66; E-Value: 5e-29
Query Start/End: Original strand, 82 - 271
Target Start/End: Complemental strand, 40613690 - 40613502
Alignment:
Q  82 ttgtaacatggatagtcattttagagaacaatattaatcttcctaactctcatcattctgttttgagtcattgttacctgttcttagtcaaaaatcaggt 181  Q
    |||||||||||||| | |||||| || ||| ||||||||||||||||| ||||| || ||| ||  ||||||| || ||||||||||| |||||||  ||    
T  40613690 ttgtaacatggataattatttta-aggacattattaatcttcctaactttcatccttatgtattaggtcattgctaactgttcttagttaaaaatccagt 40613592  T
Q  182 tttcgggctacttgatcggattgctccgaaacatacccagaaaatcagaaaaaattcaaggatcatgactcccgtagaagggacttctta 271  Q
    ||| | ||||||||||| |||||||||||||| | | || ||||| ||||||||   |||||||||||||||| |||| | |||||||||    
T  40613591 ttttgagctacttgatcagattgctccgaaacttcctcaaaaaataagaaaaaaaataaggatcatgactcccttagatgtgacttctta 40613502  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #30
Raw Score: 62; E-Value: 1e-26
Query Start/End: Original strand, 86 - 231
Target Start/End: Complemental strand, 6800938 - 6800794
Alignment:
Q  86 aacatggatagtcattttagagaacaatattaatcttcctaactctcatcattctgttttgagtcattgttacctgttcttagtcaaaaatcaggttttc 185  Q
    |||||||| |||||||||| || |||||  |||||||||| | ||||||| |||||||||  ||||||||||  |||||||||||||||||| |||||||    
T  6800938 aacatggacagtcatttta-aggacaatgctaatcttcctcattctcatccttctgttttaggtcattgttagatgttcttagtcaaaaatccggttttc 6800840  T
Q  186 gggctacttgatcggattgctccgaaacatacccagaaaatcagaa 231  Q
    |  ||||||||||  ||||||||||||| | |||| ||||||||||    
T  6800839 gaactacttgatcatattgctccgaaacttgcccaaaaaatcagaa 6800794  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #31
Raw Score: 58; E-Value: 3e-24
Query Start/End: Original strand, 82 - 235
Target Start/End: Original strand, 12847549 - 12847701
Alignment:
Q  82 ttgtaacatggatagtcattttagagaacaatattaatcttcctaactctcatcattctgttttgagtcattgttacctgttcttagtcaaaaatcaggt 181  Q
    ||||||||| |||| ||||||||  || ||||||||||||||| ||||||| |  ||||||||||  ||||||||| |||||||||||||||||||  ||    
T  12847549 ttgtaacatagataatcattttatgga-caatattaatcttcccaactctcgtatttctgttttggatcattgttagctgttcttagtcaaaaatcgagt 12847647  T
Q  182 tttcgggctacttgatcggattgctccgaaacatacccagaaaatcagaaaaaa 235  Q
    |||||||||||||||||  ||| ||| ||||| | ||||| |||| | ||||||    
T  12847648 tttcgggctacttgatcatattactctgaaacttccccagcaaataaaaaaaaa 12847701  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #32
Raw Score: 56; E-Value: 5e-23
Query Start/End: Original strand, 82 - 317
Target Start/End: Original strand, 21070472 - 21070704
Alignment:
Q  82 ttgtaacatggatagtcattttagagaacaatattaatcttcctaactctcatcattctgttttgagtcattgttacctgttcttagtcaaaaa---tca 178  Q
    ||||||||| ||||||||||||| || ||||||||||||||| |||| ||||||  | | ||||    |||||||| ||||| ||||| |||||   ||     
T  21070472 ttgtaacatagatagtcatttta-aggacaatattaatcttcataaccctcatccatttatttt----cattgttagctgtttttagtaaaaaaaaatcc 21070566  T
Q  179 ggttttcgggctacttgatcggattgctccgaaacatacccagaaaatcagaaaaaattcaaggatcatgactcccgtagaagggacttcttacattgac 278  Q
    |||||||  |||||||||| |||||||| |||||| | |||| |||||||  ||||| |||||  ||| ||||||| ||||||||||||||||  | |||    
T  21070567 ggttttcatgctacttgattggattgcttcgaaacttccccaaaaaatcaagaaaaaatcaagagtcaagactcccctagaagggacttctta-ttggac 21070665  T
Q  279 tctgcccctcaaaataaaaaattacatcatttagaccca 317  Q
     ||||||||||||||  |||||| |||  ||||||||||    
T  21070666 actgcccctcaaaatccaaaattccattgtttagaccca 21070704  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #33
Raw Score: 53; E-Value: 3e-21
Query Start/End: Original strand, 85 - 317
Target Start/End: Original strand, 26093555 - 26093798
Alignment:
Q  85 taacatggatagtcattttagagaacaatattaatcttcctaactctcatcattctgttttgagt----------cattgttacctgttcttagtcaaaa 174  Q
    ||||||||||||||||||||  || ||| |||||||||| ||||||||||| |||||||||| ||          ||||||||  |||||||||||||||    
T  26093555 taacatggatagtcattttatgga-caaaattaatcttcttaactctcatccttctgttttgggtggttttgggtcattgttagttgttcttagtcaaaa 26093653  T
Q  175 atcaggttttcgggctacttgatcggattgctccgaaacatacccagaaaatcag---aaaaaattcaaggatcatgactcccgtagaagggacttctta 271  Q
    ||   |||||| ||||| |||| | ||||||  |||||| | | || ||||||||   |||||| ||||||||||  ||||||||||| |||||||||||    
T  26093654 attgagttttcaggctatttgaacagattgcctcgaaacttcctcacaaaatcagaaaaaaaaaatcaaggatcaaaactcccgtagaggggacttctta 26093753  T
Q  272 cattgactctgcccctcaaaataaaaaattacatcatttagaccca 317  Q
    |   |||||  |||||||||||  |||||| |||||||||||||||    
T  26093754 c-gggactcctcccctcaaaatccaaaattccatcatttagaccca 26093798  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #34
Raw Score: 50; E-Value: 2e-19
Query Start/End: Original strand, 112 - 315
Target Start/End: Original strand, 33901094 - 33901300
Alignment:
Q  112 atattaatcttcctaactctcatcattctgttttgagtcattgttacctgttcttagtcaaaaatcaggttttcgggctacttgatcggattgctccgaa 211  Q
    |||||||||||||||||||  ||| |||| ||||  ||||||||||  |||| ||||||||||||  | ||||| | ||| |||||| ||||||||||||    
T  33901094 atattaatcttcctaactcatatccttctcttttaggtcattgttagttgtttttagtcaaaaatttgattttcagactatttgatcagattgctccgaa 33901193  T
Q  212 acatacccagaaaatcag-----aaaaaattcaaggatcatgactcccgtagaagggacttcttacattgactctgcccctcaaaataaaaaattacatc 306  Q
    || | ||  |||||||||     |||||| |||||||||| |||||  | ||||||||||||||| |  ||| || |||||  ||||  |||||||||||    
T  33901194 acttccctcgaaaatcagaagaaaaaaaaatcaaggatcaagactcttgaagaagggacttcttaga--gacactacccctggaaattcaaaattacatc 33901291  T
Q  307 atttagacc 315  Q
    |||||||||    
T  33901292 atttagacc 33901300  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #35
Raw Score: 49; E-Value: 7e-19
Query Start/End: Original strand, 112 - 228
Target Start/End: Original strand, 18514937 - 18515053
Alignment:
Q  112 atattaatcttcctaactctcatcattctgttttgagtcattgttacctgttcttagtcaaaaatcaggttttcgggctacttgatcggattgctccgaa 211  Q
    |||| |||||||||||||| |||| ||| |||||  |||||||||| | ||| | ||||||||||| |||||||| |||||||||||  |||||||||||    
T  18514937 atatcaatcttcctaactcacatccttcagttttacgtcattgttagcggttttcagtcaaaaatccggttttcgagctacttgatcaaattgctccgaa 18515036  T
Q  212 acatacccagaaaatca 228  Q
    |  | ||||||||||||    
T  18515037 aacttcccagaaaatca 18515053  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #36
Raw Score: 49; E-Value: 7e-19
Query Start/End: Original strand, 112 - 231
Target Start/End: Original strand, 26622247 - 26622364
Alignment:
Q  112 atattaatcttcctaactctcatcattctgttttgagtcattgttacctgttcttagtcaaaaatcaggttttcgggctacttgatcggattgctccgaa 211  Q
    ||||||| |||||||||| ||||| |||| ||||  || |||||||  ||||  |||||||||||| ||||||||| |||||||||| ||||||||||||    
T  26622247 atattaaacttcctaactttcatccttctattttaggttattgttagttgtt--tagtcaaaaatccggttttcggactacttgatcagattgctccgaa 26622344  T
Q  212 acatacccagaaaatcagaa 231  Q
    || | | |||||||||||||    
T  26622345 acttcctcagaaaatcagaa 26622364  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #37
Raw Score: 46; E-Value: 4e-17
Query Start/End: Original strand, 82 - 135
Target Start/End: Complemental strand, 8739000 - 8738948
Alignment:
Q  82 ttgtaacatggatagtcattttagagaacaatattaatcttcctaactctcatc 135  Q
    ||||||||||||||||||||||| ||||||||||||||||||||||||||||||    
T  8739000 ttgtaacatggatagtcatttta-agaacaatattaatcttcctaactctcatc 8738948  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #38
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 82 - 145
Target Start/End: Original strand, 34530321 - 34530383
Alignment:
Q  82 ttgtaacatggatagtcattttagagaacaatattaatcttcctaactctcatcattctgtttt 145  Q
    ||||||||||| ||||||||||| || ||||||||||||||||||||| |||||||| ||||||    
T  34530321 ttgtaacatggttagtcatttta-aggacaatattaatcttcctaactttcatcattgtgtttt 34530383  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #39
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 82 - 135
Target Start/End: Complemental strand, 8739203 - 8739151
Alignment:
Q  82 ttgtaacatggatagtcattttagagaacaatattaatcttcctaactctcatc 135  Q
    ||||||||||| ||||||||||| || |||||||||||||||||||||||||||    
T  8739203 ttgtaacatgggtagtcatttta-aggacaatattaatcttcctaactctcatc 8739151  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #40
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 82 - 145
Target Start/End: Complemental strand, 8973624 - 8973562
Alignment:
Q  82 ttgtaacatggatagtcattttagagaacaatattaatcttcctaactctcatcattctgtttt 145  Q
    |||||||||||||| |||||||| || |||||||||| |||||||||||||||| || ||||||    
T  8973624 ttgtaacatggataatcatttta-aggacaatattaaccttcctaactctcatccttgtgtttt 8973562  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #41
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 112 - 317
Target Start/End: Complemental strand, 11186161 - 11185969
Alignment:
Q  112 atattaatcttcctaactctcatcattctgttttgagtcattgttacctgttcttagtcaaaaatcaggttttcgggctacttgatcggattgctccgaa 211  Q
    |||||||| ||| | ||||||||| |||||||||  || |||||||  |||||||||| ||||||  |||||||   |||||||||  ||||||||||||    
T  11186161 atattaattttcttgactctcatccttctgttttaggtaattgttagatgttcttagtaaaaaattcggttttcaa-ctacttgattagattgctccgaa 11186063  T
Q  212 acatacccagaaaatcagaaaaaattcaaggatcatgactcccgtagaagggacttcttacattgactctgcccctcaaaataaaaaattacatcattta 311  Q
    || |  |||||||||||           ||||||| ||||||||| |||||||||||||||  | |||| ||||||||||||  ||||||  ||| ||||    
T  11186062 acttctccagaaaatca-----------aggatcaggactcccgttgaagggacttcttacgat-actccgcccctcaaaattcaaaattcaatcgttta 11185975  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #42
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 82 - 145
Target Start/End: Complemental strand, 27493964 - 27493902
Alignment:
Q  82 ttgtaacatggatagtcattttagagaacaatattaatcttcctaactctcatcattctgtttt 145  Q
    ||||||||||||||||||||||| | |||||||||||||||||||||  ||||| || ||||||    
T  27493964 ttgtaacatggatagtcatttta-aaaacaatattaatcttcctaacattcatccttgtgtttt 27493902  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #43
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 82 - 128
Target Start/End: Complemental strand, 27494168 - 27494123
Alignment:
Q  82 ttgtaacatggatagtcattttagagaacaatattaatcttcctaac 128  Q
    ||||||||||||||||||||||| || ||||||||||||||||||||    
T  27494168 ttgtaacatggatagtcatttta-aggacaatattaatcttcctaac 27494123  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #44
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 179 - 272
Target Start/End: Original strand, 31561646 - 31561739
Alignment:
Q  179 ggttttcgggctacttgatcggattgctccgaaacatacccagaaaatcagaaaaaattcaaggatcatgactcccgtagaagggacttcttac 272  Q
    |||||||  ||||||||||| |||| ||||||||| | |||||||||||| || |||   ||||| || ||||||||||||||  |||||||||    
T  31561646 ggttttcatgctacttgatcagattactccgaaactttcccagaaaatcaaaagaaaaaaaaggaccaagactcccgtagaagaaacttcttac 31561739  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #45
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 112 - 213
Target Start/End: Original strand, 41253435 - 41253536
Alignment:
Q  112 atattaatcttcctaactctcatcattctgttttgagtcattgttacctgttcttagtcaaaaatcaggttttcgggctacttgatcggattgctccgaa 211  Q
    |||||||||||||||||| ||||| | |||||||  ||||||||||  ||||| || | |||||||    || ||||| |||||||| ||||||||||||    
T  41253435 atattaatcttcctaactatcatcctcctgttttaggtcattgttagttgttcctaataaaaaatccaaattccgggccacttgatcagattgctccgaa 41253534  T
Q  212 ac 213  Q
    ||    
T  41253535 ac 41253536  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #46
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 82 - 138
Target Start/End: Original strand, 4650201 - 4650256
Alignment:
Q  82 ttgtaacatggatagtcattttagagaacaatattaatcttcctaactctcatcatt 138  Q
    |||| ||||||||||||||| || ||||||||||||||||||||| || ||||||||    
T  4650201 ttgtcacatggatagtcattgta-agaacaatattaatcttcctatctttcatcatt 4650256  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #47
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 82 - 145
Target Start/End: Complemental strand, 28445224 - 28445162
Alignment:
Q  82 ttgtaacatggatagtcattttagagaacaatattaatcttcctaactctcatcattctgtttt 145  Q
    |||||||||| || ||| ||||| || ||||||||||||||||||||||||||| || ||||||    
T  28445224 ttgtaacatgtatggtcgtttta-aggacaatattaatcttcctaactctcatccttgtgtttt 28445162  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #48
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 109 - 203
Target Start/End: Complemental strand, 41639482 - 41639385
Alignment:
Q  109 acaatattaatcttcctaactctcatcattctgttttgagtcattgttacctgttcttagt---caaaaatcaggttttcgggctacttgatcggatt 203  Q
    ||||||||||| | ||||||||||||| || ||||||  ||||||||||  ||||||||||    ||||||| | ||||| |||||||||||| ||||    
T  41639482 acaatattaatttccctaactctcatctttttgttttaggtcattgttagttgttcttagtaaaaaaaaatctgattttcaggctacttgatcagatt 41639385  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #49
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 82 - 122
Target Start/End: Complemental strand, 28445420 - 28445381
Alignment:
Q  82 ttgtaacatggatagtcattttagagaacaatattaatctt 122  Q
    ||||||||||||||||||||||| || ||||||||||||||    
T  28445420 ttgtaacatggatagtcatttta-aggacaatattaatctt 28445381  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #50
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 82 - 126
Target Start/End: Original strand, 38641040 - 38641083
Alignment:
Q  82 ttgtaacatggatagtcattttagagaacaatattaatcttccta 126  Q
    ||||||||| ||||||||||||| || ||||||||||||||||||    
T  38641040 ttgtaacatagatagtcatttta-aggacaatattaatcttccta 38641083  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3 (Bit Score: 153; Significance: 6e-81; HSPs: 49)
Name: chr3
Description:

Target: chr3; HSP #1
Raw Score: 153; E-Value: 6e-81
Query Start/End: Original strand, 85 - 317
Target Start/End: Original strand, 51258550 - 51258781
Alignment:
Q  85 taacatggatagtcattttagagaacaatattaatcttcctaactctcatcattctgttttgagtcattgttacctgttcttagtcaaaaatcaggtttt 184  Q
    ||||||||||||||||||||| ||||||||||||||||| ||||||||||| || ||||||||||||||||||| ||||||||||||||||||  |||||    
T  51258550 taacatggatagtcattttagggaacaatattaatcttcataactctcatccttttgttttgagtcattgttacatgttcttagtcaaaaatcgagtttt 51258649  T
Q  185 cgggctacttgatcggattgctccgaaacatacccagaaaatcagaaaaaattcaaggatcatgactcccgtagaagggacttcttacattgactctgcc 284  Q
    ||| | ||||||||||||||||||||||| | ||||||||||||||||||||||||||||||||||||||||||||||||||||||||   ||||| |||    
T  51258650 cggacaacttgatcggattgctccgaaactttcccagaaaatcagaaaaaattcaaggatcatgactcccgtagaagggacttcttac-gggactccgcc 51258748  T
Q  285 cctcaaaataaaaaattacatcatttagaccca 317  Q
    |||||||||  |||||| |||| ||||||||||    
T  51258749 cctcaaaatccaaaatttcatcgtttagaccca 51258781  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #2
Raw Score: 136; E-Value: 8e-71
Query Start/End: Original strand, 82 - 317
Target Start/End: Original strand, 35142218 - 35142450
Alignment:
Q  82 ttgtaacatggatagtcattttagagaacaatattaatcttcctaactctcatcattctgttttgagtcattgttacctgttcttagtcaaaaatcaggt 181  Q
    ||||||||||||||||||||||| ||| |||||||||||||||||||||||||| ||||| |||| |||||||||| |||||||||||||||||   |||    
T  35142218 ttgtaacatggatagtcattttaaaga-caatattaatcttcctaactctcatccttctgctttgggtcattgttatctgttcttagtcaaaaactgggt 35142316  T
Q  182 tttcgggctacttgatcggattgctccgaaacatacccagaaaatcagaaaaaattcaaggatcatgactcccgtagaagggacttcttacattgactct 281  Q
    |||||||||||||||||||||||||||||||| | ||||||||||||||||||||||||||| ||||||||||||||||||||||||||||   | |||     
T  35142317 tttcgggctacttgatcggattgctccgaaac-ttcccagaaaatcagaaaaaattcaaggaccatgactcccgtagaagggacttcttac-ggggctcc 35142414  T
Q  282 gcccctcaaaataaaaaattacatcatttagaccca 317  Q
    |||||| |||||  |||||| |||| ||||||||||    
T  35142415 gcccctaaaaatccaaaattccatcgtttagaccca 35142450  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #3
Raw Score: 127; E-Value: 2e-65
Query Start/End: Original strand, 82 - 315
Target Start/End: Original strand, 50716396 - 50716628
Alignment:
Q  82 ttgtaacatggatagtcattttagagaacaatattaatcttcctaactctcatcattctgtttt-gagtcattgttacctgttcttagtcaaaaatcagg 180  Q
    |||||||||| ||||||||||||| || |||||||||||||||||||||||||||||| ||||| | ||||||||||| |||||||||||||||||| ||    
T  50716396 ttgtaacatgaatagtcattttaggga-caatattaatcttcctaactctcatcattccgtttttgggtcattgttacttgttcttagtcaaaaatcggg 50716494  T
Q  181 ttttcgggctacttgatcggattgctccgaaacatacccagaaaatcagaaaaaattcaaggatcatgactcccgtagaagggacttcttacattgactc 280  Q
    ||||||||||||||||||||||||||||||||| | ||||||||||||||||||| ||||||| |||||||||  |||||| ||||||||||   || ||    
T  50716495 ttttcgggctacttgatcggattgctccgaaacttccccagaaaatcagaaaaaactcaaggaccatgactcctctagaagagacttcttac-gggattc 50716593  T
Q  281 tgcccctcaaaataaaaaattacatcatttagacc 315  Q
     ||||||||||||  |||||| |||| ||||||||    
T  50716594 cgcccctcaaaatccaaaattccatcctttagacc 50716628  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #4
Raw Score: 127; E-Value: 2e-65
Query Start/End: Original strand, 82 - 315
Target Start/End: Complemental strand, 50796451 - 50796219
Alignment:
Q  82 ttgtaacatggatagtcattttagagaacaatattaatcttcctaactctcatcattctgtttt-gagtcattgttacctgttcttagtcaaaaatcagg 180  Q
    |||||||||| ||||||||||||| || |||||||||||||||||||||||||||||| ||||| | ||||||||||| |||||||||||||||||| ||    
T  50796451 ttgtaacatgaatagtcattttaggga-caatattaatcttcctaactctcatcattccgtttttgggtcattgttacttgttcttagtcaaaaatcggg 50796353  T
Q  181 ttttcgggctacttgatcggattgctccgaaacatacccagaaaatcagaaaaaattcaaggatcatgactcccgtagaagggacttcttacattgactc 280  Q
    ||||||||||||||||||||||||||||||||| | ||||||||||||||||||| ||||||| |||||||||  |||||| ||||||||||   || ||    
T  50796352 ttttcgggctacttgatcggattgctccgaaacttccccagaaaatcagaaaaaactcaaggaccatgactcctctagaagagacttcttac-gggattc 50796254  T
Q  281 tgcccctcaaaataaaaaattacatcatttagacc 315  Q
     ||||||||||||  |||||| |||| ||||||||    
T  50796253 cgcccctcaaaatccaaaattccatcctttagacc 50796219  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #5
Raw Score: 124; E-Value: 1e-63
Query Start/End: Original strand, 82 - 313
Target Start/End: Complemental strand, 3352081 - 3351852
Alignment:
Q  82 ttgtaacatggatagtcattttagagaacaatattaatcttcctaactctcatcattctgttttgagtcattgttacctgttcttagtcaaaaatcaggt 181  Q
    |||||||||||||||||||||||| || |||||||||||||||||||||||||  |||||||||| |||||||||||| ||||||||| ||||||  |||    
T  3352081 ttgtaacatggatagtcattttaggga-caatattaatcttcctaactctcattcttctgttttgggtcattgttaccggttcttagtaaaaaatagggt 3351983  T
Q  182 tttcgggctacttgatcggattgctccgaaacatacccagaaaatcagaaaaaattcaaggatcatgactcccgtagaagggacttcttacattgactct 281  Q
    |||| ||||||||||||||||||||||||||| | || |||||||||||||||||||| |||  ||||||||||||||||||||||||||    |||||     
T  3351982 tttcaggctacttgatcggattgctccgaaacttccctagaaaatcagaaaaaattcagggacaatgactcccgtagaagggacttctta-tgggactcc 3351884  T
Q  282 gcccctcaaaataaaaaattacatcatttaga 313  Q
    ||||||||||||  |||||| |||| ||||||    
T  3351883 gcccctcaaaatctaaaattccatcgtttaga 3351852  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #6
Raw Score: 119; E-Value: 1e-60
Query Start/End: Original strand, 82 - 252
Target Start/End: Complemental strand, 49096242 - 49096072
Alignment:
Q  82 ttgtaacatggatagtcattttagagaacaatattaatcttcctaactctcatcattctgttttgagtcattgttacctgttcttagtcaaaaatcaggt 181  Q
    ||||||||| |||||||||||||| ||||||||| ||||||||||||||||||| |||||||||||||||||||||||||||||| ||||||||||  ||    
T  49096242 ttgtaacatagatagtcattttagggaacaatataaatcttcctaactctcatccttctgttttgagtcattgttacctgttcttcgtcaaaaatcgagt 49096143  T
Q  182 tttcgggctacttgatcggattgctccgaaacatacccagaaaatcagaaaaaattcaaggatcatgactc 252  Q
    ||||||||||||||||||||||||||| |||| | ||| |||| |||||||||| ||||||||||||||||    
T  49096142 tttcgggctacttgatcggattgctccaaaacttcccccgaaagtcagaaaaaaatcaaggatcatgactc 49096072  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #7
Raw Score: 117; E-Value: 2e-59
Query Start/End: Original strand, 82 - 313
Target Start/End: Original strand, 28873149 - 28873379
Alignment:
Q  82 ttgtaacatggatagtcattttagagaacaatattaatcttcctaactctcatcattctg-ttttgagtcattgttacctgttcttagtcaaaaatcagg 180  Q
    ||||||||| |||||||||||||| || |||||||||||||| ||||||||||  ||| | ||||| |||| |||||| |||||||||||||||||| ||    
T  28873149 ttgtaacatagatagtcattttaggga-caatattaatcttcttaactctcattcttccgcttttgggtcactgttacttgttcttagtcaaaaatcggg 28873247  T
Q  181 ttttcgggctacttgatcggattgctccgaaacatacccagaaaatcagaaaaaattcaaggatcatgactcccgtagaagggacttcttacattgactc 280  Q
    ||||||||||||||||||||||||||||||||| | |||||||||| |||||||||||||||| |||||||||| |||||| ||||||||||   |||||    
T  28873248 ttttcgggctacttgatcggattgctccgaaacttccccagaaaattagaaaaaattcaaggaacatgactcccctagaagagacttcttac-gggactc 28873346  T
Q  281 tgcccctcaaaataaaaaattacatcatttaga 313  Q
     ||||||||||||  |||||| |||| ||||||    
T  28873347 cgcccctcaaaatccaaaattccatcgtttaga 28873379  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #8
Raw Score: 117; E-Value: 2e-59
Query Start/End: Original strand, 82 - 270
Target Start/End: Complemental strand, 38977763 - 38977576
Alignment:
Q  82 ttgtaacatggatagtcattttagagaacaatattaatcttcctaactctcatcattctgttttgagtcattgttacctgttcttagtcaaaaatcaggt 181  Q
    |||||||||||||||||||||||  || |||||||||||||||||||||||||| |||||||||| ||||||||||||||| |||||| ||||| |  ||    
T  38977763 ttgtaacatggatagtcattttatgga-caatattaatcttcctaactctcatccttctgttttgggtcattgttacctgtccttagttaaaaaccgagt 38977665  T
Q  182 tttcgggctacttgatcggattgctccgaaacatacccagaaaatcagaaaaaattcaaggatcatgactcccgtagaagggacttctt 270  Q
    ||||| ||||||||||||||||||||| |||| | |||||||||| |||||||||||||||| | ||||||||||||||||||||||||    
T  38977664 tttcgagctacttgatcggattgctccaaaacttccccagaaaataagaaaaaattcaaggaccgtgactcccgtagaagggacttctt 38977576  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #9
Raw Score: 116; E-Value: 7e-59
Query Start/End: Original strand, 82 - 317
Target Start/End: Complemental strand, 34821358 - 34821125
Alignment:
Q  82 ttgtaacatggatagtcattttagagaacaatattaatcttcctaactctcatcattctgttttgagtcattgttacctgttcttagtcaaaaatcaggt 181  Q
    ||||||||| |||||||||||||  || |||||||||||||||||| | ||||| |||||||||| |||||||||||||||||||||| ||||| | |||    
T  34821358 ttgtaacatagatagtcattttatgga-caatattaatcttcctaaatttcatccttctgttttgggtcattgttacctgttcttagttaaaaagcgggt 34821260  T
Q  182 tttcgggctacttgatcggattgctccgaaacatacccagaaaatcagaaaaaattcaaggatcatgactcccgtagaagggacttcttacattgactct 281  Q
    |||| |||||||||||||||| |||| ||||| | ||||||||||||||||||||||||||| |||||||| | |||||||||||||||||   || ||     
T  34821259 tttcaggctacttgatcggatcgctctgaaacttccccagaaaatcagaaaaaattcaaggaccatgactctcatagaagggacttcttac-gggagtcc 34821161  T
Q  282 gcccctcaaaataaaaaattacatcatttagaccca 317  Q
    ||||||||||||  |||||| |||| ||||||||||    
T  34821160 gcccctcaaaatccaaaattccatcgtttagaccca 34821125  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #10
Raw Score: 115; E-Value: 3e-58
Query Start/End: Original strand, 82 - 272
Target Start/End: Original strand, 39149953 - 39150142
Alignment:
Q  82 ttgtaacatggatagtcattttagagaacaatattaatcttcctaactctcatcattctgttttgagtcattgttacctgttcttagtcaaaaatcaggt 181  Q
    ||||||||| | ||||||||||||||| |||||||||| ||||||||||||||| |||||||||| |||| |||||| |||||||||| ||||| | |||    
T  39149953 ttgtaacattggtagtcattttagaga-caatattaattttcctaactctcatccttctgttttgggtcactgttacatgttcttagttaaaaaccgggt 39150051  T
Q  182 tttcgggctacttgatcggattgctccgaaacatacccagaaaatcagaaaaaattcaaggatcatgactcccgtagaagggacttcttac 272  Q
    |||||||||||||| ||| ||||||||||||| | ||||||||||||||||||||||||||| ||||||| || |||||||||||||||||    
T  39150052 tttcgggctacttggtcgaattgctccgaaacttccccagaaaatcagaaaaaattcaaggaccatgacttccttagaagggacttcttac 39150142  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #11
Raw Score: 112; E-Value: 2e-56
Query Start/End: Original strand, 86 - 317
Target Start/End: Complemental strand, 46622806 - 46622577
Alignment:
Q  86 aacatggatagtcattttagagaacaatattaatcttcctaactctcatcattctgttttgagtcattgttacctgttcttagtcaaaaatcaggttttc 185  Q
    |||||||||||||||||||| || |||||||||||||||| ||||||||  |||||||||| ||||||||||| |||||||||||||||||| | |||||    
T  46622806 aacatggatagtcattttaggga-caatattaatcttccttactctcattcttctgttttgggtcattgttacttgttcttagtcaaaaatcggattttc 46622708  T
Q  186 gggctacttgatcggattgctccgaaacatacccagaaaatcagaaaaaattcaaggatcatgactcccgtagaagggacttcttacattgactctgccc 285  Q
    || ||||||||||||||||||||||||| | ||||||||||||||||||||||||||| ||| |||||| |||||   | |||||||   ||||| ||||    
T  46622707 ggactacttgatcggattgctccgaaactttcccagaaaatcagaaaaaattcaaggaccatcactcccatagaatcaatttcttac-gggactccgccc 46622609  T
Q  286 ctcaaaataaaaaattacatcatttagaccca 317  Q
    |||| |||  |||||| |||| ||||||||||    
T  46622608 ctcagaatccaaaattccatcgtttagaccca 46622577  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #12
Raw Score: 109; E-Value: 1e-54
Query Start/End: Original strand, 82 - 293
Target Start/End: Complemental strand, 43472984 - 43472774
Alignment:
Q  82 ttgtaacatggatagtcattttagagaacaatattaatcttcctaactctcatcattctgttttgagtcattgttacctgttcttagtcaaaaatcaggt 181  Q
    |||||||||| |||| ||||||| || ||||||||||||||||||||||| ||| || ||||||| |||||||||| ||||||||||||||||||| |||    
T  43472984 ttgtaacatgtatagccatttta-aggacaatattaatcttcctaactcttatccttttgttttgggtcattgttatctgttcttagtcaaaaatcgggt 43472886  T
Q  182 tttcgggctacttgatcggattgctccgaaacataccc-agaaaatcagaaaaaattcaaggatcatgactcccgtagaagggacttcttacattgactc 280  Q
    |||||||||||||||||||||| ||| ||||| | ||| | |||||||||||||||||||||| |||||||||  |||||||||||||||||   |||||    
T  43472885 tttcgggctacttgatcggattactctgaaacttccccaaaaaaatcagaaaaaattcaaggaccatgactcctctagaagggacttcttac-gggactc 43472787  T
Q  281 tgcccctcaaaat 293  Q
     ||||||||||||    
T  43472786 cgcccctcaaaat 43472774  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #13
Raw Score: 108; E-Value: 4e-54
Query Start/End: Original strand, 82 - 317
Target Start/End: Complemental strand, 2358637 - 2358404
Alignment:
Q  82 ttgtaacatggatagtcattttagagaacaatattaatcttcctaactctcatcattctgttttgagtcattgttacctgttcttagtcaaaaatcaggt 181  Q
    |||||||||| |||| |||||||| || |||||||||||||||||||||| ||| || ||||||| ||||||||| | | |||||||||||||||| |||    
T  2358637 ttgtaacatgtatagccattttaggga-caatattaatcttcctaactcttatccttttgttttgggtcattgttgcatattcttagtcaaaaatcgggt 2358539  T
Q  182 tttcgggctacttgatcggattgctccgaaacatacccagaaaatcagaaaaaattcaaggatcatgactcccgtagaagggacttcttacattgactct 281  Q
    ||| |||||||||||||| ||||||| ||||| | |||| |||||||||||||||||||||| |||||||||| |||||||||||||||||   ||||      
T  2358538 ttttgggctacttgatcgaattgctctgaaacttccccaaaaaatcagaaaaaattcaaggaccatgactcccctagaagggacttcttac-gggactac 2358440  T
Q  282 gcccctcaaaataaaaaattacatcatttagaccca 317  Q
    ||||||||||||  |||||| |||  ||||||||||    
T  2358439 gcccctcaaaatctaaaattccattgtttagaccca 2358404  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #14
Raw Score: 108; E-Value: 4e-54
Query Start/End: Original strand, 114 - 293
Target Start/End: Original strand, 3938357 - 3938535
Alignment:
Q  114 attaatcttcctaactctcatcattctgttttgagtcattgttacctgttcttagtcaaaaatcaggttttcgggctacttgatcggattgctccgaaac 213  Q
    |||||||||||||||||| ||| || ||||||| |||||||||||||||||||||||||||||| |||||||||| |||||||||||||||||| |||||    
T  3938357 attaatcttcctaactcttatccttttgttttgggtcattgttacctgttcttagtcaaaaatctggttttcgggttacttgatcggattgctctgaaac 3938456  T
Q  214 atacccagaaaatcagaaaaaattcaaggatcatgactcccgtagaagggacttcttacattgactctgcccctcaaaat 293  Q
     | |||| |||||||||||||||||||||| |||||||||| || |||| ||||||||||  ||||| ||||||||||||    
T  3938457 ttccccaaaaaatcagaaaaaattcaaggaccatgactcccttataaggaacttcttaca-agactccgcccctcaaaat 3938535  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #15
Raw Score: 106; E-Value: 7e-53
Query Start/End: Original strand, 82 - 317
Target Start/End: Original strand, 47302164 - 47302396
Alignment:
Q  82 ttgtaacatggatagtcattttagagaacaatattaatcttcctaactctcatcattctgttttgagtcattgttacctgttcttagtcaaaaatcaggt 181  Q
    |||||||||| |||| ||||||||   ||||||||||| ||| ||||||| ||| || ||||||| ||||||||||| ||||||||||||||||||  ||    
T  47302164 ttgtaacatgtatagccattttagg--acaatattaatattc-taactcttatccttttgttttgggtcattgttacatgttcttagtcaaaaatcgagt 47302260  T
Q  182 tttcgggctacttgatcggattgctccgaaacataccc-agaaaatcagaaaaaattcaaggatcatgactcccgtagaagggacttcttacattgactc 280  Q
    ||||||||||||||||||||||| || ||||| | ||| | ||||||||||||||||||||||||||||||||| |||||||||||||||||   |||||    
T  47302261 tttcgggctacttgatcggattgttctgaaactttcccaaaaaaatcagaaaaaattcaaggatcatgactcccatagaagggacttcttac-gggactc 47302359  T
Q  281 tgcccctcaaaataaaaaattacatcatttagaccca 317  Q
    |||||||||||||  |||||| |||  ||||||||||    
T  47302360 tgcccctcaaaatccaaaattccattgtttagaccca 47302396  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #16
Raw Score: 101; E-Value: 6e-50
Query Start/End: Original strand, 82 - 270
Target Start/End: Original strand, 52777375 - 52777562
Alignment:
Q  82 ttgtaacatggatagtcattttagagaacaatattaatcttcctaactctcatcattctgttttgagtcattgttacctgttcttagtcaaaaatcaggt 181  Q
    |||||||||| |||| |||||||| || |||||||||||||| ||||||| ||| || ||||||| ||||||| ||| |||||||||||||||||| |||    
T  52777375 ttgtaacatgtatagccattttaggga-caatattaatcttcttaactcttatccttttgttttgggtcattgctacatgttcttagtcaaaaatcgggt 52777473  T
Q  182 tttcgggctacttgatcggattgctccgaaacatacccagaaaatcagaaaaaattcaaggatcatgactcccgtagaagggacttctt 270  Q
    |||||||||||||||||||||||||| ||||| | |||| ||||||||||||||||||||||  ||| ||||| || ||||||||||||    
T  52777474 tttcgggctacttgatcggattgctctgaaacttccccaaaaaatcagaaaaaattcaaggactatgtctcccttaaaagggacttctt 52777562  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #17
Raw Score: 100; E-Value: 3e-49
Query Start/End: Original strand, 82 - 293
Target Start/End: Complemental strand, 3902821 - 3902612
Alignment:
Q  82 ttgtaacatggatagtcattttagagaacaatattaatcttcctaactctcatcattctgttttgagtcattgttacctgttcttagtcaaaaatcaggt 181  Q
    |||||||||||||  ||||||||  || |||||||||||||| ||||||||||| ||||| |||| ||||||||||| |||||||||||||||||| |||    
T  3902821 ttgtaacatggatgatcattttatgga-caatattaatcttcataactctcatccttctgctttgggtcattgttacatgttcttagtcaaaaatcgggt 3902723  T
Q  182 tttcgggctacttgatcggattgctccgaaacatacccagaaaatcagaaaaaattcaaggatcatgactcccgtagaagggacttcttacattgactct 281  Q
    |||| |  |||||||||||||||||| ||||| | ||||||||||||||||||||||||||| |||||| ||| ||||||| | |||||||   |||||     
T  3902722 tttcagattacttgatcggattgctcggaaacttgcccagaaaatcagaaaaaattcaaggaccatgacacccttagaaggaatttcttac-gggactcc 3902624  T
Q  282 gcccctcaaaat 293  Q
    ||||||||||||    
T  3902623 gcccctcaaaat 3902612  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #18
Raw Score: 99; E-Value: 1e-48
Query Start/End: Original strand, 82 - 236
Target Start/End: Original strand, 47123170 - 47123323
Alignment:
Q  82 ttgtaacatggatagtcattttagagaacaatattaatcttcctaactctcatcattctgttttgagtcattgttacctgttcttagtcaaaaatcaggt 181  Q
    |||||||||||||| ||||||||| || |||||||||||||||||||||||||| |||||||||| | |||||||||||||||||||| ||||| |   |    
T  47123170 ttgtaacatggataatcattttaggga-caatattaatcttcctaactctcatccttctgttttgggccattgttacctgttcttagttaaaaaccgaat 47123268  T
Q  182 tttcgggctacttgatcggattgctccgaaacatacccagaaaatcagaaaaaat 236  Q
    |||||||||||||||||||||||||||||||| | ||||||||||||||||||||    
T  47123269 tttcgggctacttgatcggattgctccgaaacttgcccagaaaatcagaaaaaat 47123323  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #19
Raw Score: 96; E-Value: 6e-47
Query Start/End: Original strand, 82 - 269
Target Start/End: Complemental strand, 35345924 - 35345738
Alignment:
Q  82 ttgtaacatggatagtcattttagagaacaatattaatcttcctaactctcatcattctgttttgagtcattgttacctgttcttagtcaaaaatcaggt 181  Q
    |||||||||||||||||||||||  || |||||||||| || |||||||||||| || ||||||  ||||||||||  |||||||||||||||||  |||    
T  35345924 ttgtaacatggatagtcattttatgga-caatattaatatttctaactctcatccttttgtttttcgtcattgttagttgttcttagtcaaaaattgggt 35345826  T
Q  182 tttcgggctacttgatcggattgctccgaaacatacccagaaaatcagaaaaaattcaaggatcatgactcccgtagaagggacttct 269  Q
    ||||||| || ||||||||||||||||||||| | ||||||||||||||| ||| ||||| |||| ||||| ||||||||||||||||    
T  35345825 tttcgggttaattgatcggattgctccgaaacttccccagaaaatcagaagaaaatcaagtatcaagactctcgtagaagggacttct 35345738  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #20
Raw Score: 95; E-Value: 2e-46
Query Start/End: Original strand, 82 - 236
Target Start/End: Original strand, 47130536 - 47130689
Alignment:
Q  82 ttgtaacatggatagtcattttagagaacaatattaatcttcctaactctcatcattctgttttgagtcattgttacctgttcttagtcaaaaatcaggt 181  Q
    |||||||||||| | ||||||||| || |||||||||||||||||||||||||| |||||||||| | |||||||||||||||||||| ||||| |   |    
T  47130536 ttgtaacatggacaatcattttaggga-caatattaatcttcctaactctcatccttctgttttgggccattgttacctgttcttagttaaaaaccgaat 47130634  T
Q  182 tttcgggctacttgatcggattgctccgaaacatacccagaaaatcagaaaaaat 236  Q
    |||||||||||||||||||||||||||||||| | ||||||||||||||||||||    
T  47130635 tttcgggctacttgatcggattgctccgaaacttgcccagaaaatcagaaaaaat 47130689  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #21
Raw Score: 93; E-Value: 4e-45
Query Start/End: Original strand, 82 - 270
Target Start/End: Complemental strand, 47739947 - 47739761
Alignment:
Q  82 ttgtaacatggatagtcattttagagaacaatattaatcttcctaactctcatcattctgttttgagtcattgttacctgttcttagtcaaaaatcaggt 181  Q
    ||||||||| ||||||||||| || || |||||||||||||| ||||||||||| |||||||||| |||||| ||||||| | ||||| ||||||  |||    
T  47739947 ttgtaacatagatagtcatttaaggga-caatattaatcttcataactctcatccttctgttttg-gtcattattacctggttttagttaaaaattgggt 47739850  T
Q  182 tttcgggctacttgatcggattgctccgaaacatacccagaaaatcagaaaaaattcaaggatcatgactcccgtagaagggacttctt 270  Q
    ||||||||||||||||||||||||||| |||| | |||||||||| |||||||||||||| | | |||||||| |||||| ||||||||    
T  47739849 tttcgggctacttgatcggattgctccaaaacttccccagaaaattagaaaaaattcaagaaccgtgactcccatagaagagacttctt 47739761  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #22
Raw Score: 79; E-Value: 9e-37
Query Start/End: Original strand, 82 - 208
Target Start/End: Complemental strand, 501156 - 501031
Alignment:
Q  82 ttgtaacatggatagtcattttagagaacaatattaatcttcctaactctcatcattctgttttgagtcattgttacctgttcttagtcaaaaatcaggt 181  Q
    |||||| ||||||||||||||||  || ||||||||||||||||| |||||||| |||||||||| ||||||||||| |||| ||| |||||||||| ||    
T  501156 ttgtaaaatggatagtcattttatgga-caatattaatcttcctagctctcatccttctgttttgggtcattgttacatgtttttattcaaaaatcatgt 501058  T
Q  182 tttcgggctacttgatcggattgctcc 208  Q
    |||||||||||||||||||||||||||    
T  501057 tttcgggctacttgatcggattgctcc 501031  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #23
Raw Score: 79; E-Value: 9e-37
Query Start/End: Original strand, 109 - 235
Target Start/End: Complemental strand, 30721799 - 30721674
Alignment:
Q  109 acaatattaatcttcctaactctcatcattctgttttgagtcattgttacctgttcttagtcaaaaatcaggttttcgggctacttgatcggattgctcc 208  Q
    ||||||||||||||||||||||| ||| |||||||||| ||||||| |||| ||| ||||||||||||  |||||||| |||||||||||||||||||||    
T  30721799 acaatattaatcttcctaactcttatccttctgttttgggtcattgatacccgttattagtcaaaaattgggttttcgagctacttgatcggattgctcc 30721700  T
Q  209 gaaacatacccagaaaatcagaaaaaa 235  Q
    ||||| | |||||||||||||||||||    
T  30721699 gaaac-ttcccagaaaatcagaaaaaa 30721674  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #24
Raw Score: 78; E-Value: 3e-36
Query Start/End: Original strand, 82 - 317
Target Start/End: Complemental strand, 51540629 - 51540409
Alignment:
Q  82 ttgtaacatggatagtcattttagagaacaatattaatcttcctaactctcatcattctgttttgagtcattgttacctgttcttagtcaaaaatcaggt 181  Q
    ||||||| |||||||||||||||| || |||||||||||||||||||||||||| ||||  |||| |||||||||||  ||||||||||||||||| |||    
T  51540629 ttgtaacttggatagtcattttaggga-caatattaatcttcctaactctcatccttctcctttgggtcattgttacacgttcttagtcaaaaatcgggt 51540531  T
Q  182 tttcgggctacttgatcggattgctccgaaacatacccagaaaatcagaaaaaattcaaggatcatgactcccgtagaagggacttcttacat-tgactc 280  Q
    ||             ||||||||||||||||| | |||| |||||| ||||||||||||||| |||||||||| ||||||||||||||  |||  || ||    
T  51540530 tt-------------tcggattgctccgaaacttccccaaaaaatccgaaaaaattcaaggaccatgactcccttagaagggacttct--catgggattc 51540446  T
Q  281 tgcccctcaaaataaaaaattacatcatttagaccca 317  Q
    |||||||||||||  |||| | |||| ||||||||||    
T  51540445 tgcccctcaaaatccaaaactccatcgtttagaccca 51540409  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #25
Raw Score: 77; E-Value: 1e-35
Query Start/End: Original strand, 112 - 315
Target Start/End: Original strand, 40062552 - 40062755
Alignment:
Q  112 atattaatcttcctaactctcatcattctgttttgagtcattgttacctgttcttagtcaaaaatcaggttttcgggctacttgatcggattgctccgaa 211  Q
    ||||||||||||||||||||  || || ||||||  |||||| |||  |||||||||||||||||| |||||||||||||||||||| |||||| |||||    
T  40062552 atattaatcttcctaactctggtccttttgttttaggtcattattagttgttcttagtcaaaaatctggttttcgggctacttgatcagattgcaccgaa 40062651  T
Q  212 acatacccagaaaatca-gaaaaaattcaaggatcatgactcccgtagaagggacttcttacattgactctgcccctcaaaataaaaaattacatcattt 310  Q
    |  | || ||||||||| ||||||  |||||||||| ||||| |||||||||||||||||||  | ||| || | ||||||||  |||||| ||||||||    
T  40062652 atttccctagaaaatcaggaaaaacatcaaggatcaagactctcgtagaagggacttcttacggt-actttgtctctcaaaatctaaaattccatcattt 40062750  T
Q  311 agacc 315  Q
    |||||    
T  40062751 agacc 40062755  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #26
Raw Score: 72; E-Value: 1e-32
Query Start/End: Original strand, 76 - 231
Target Start/End: Original strand, 46624858 - 46625012
Alignment:
Q  76 atatgcttgtaacatggatagtcattttagagaacaatattaatcttcctaactctcatcattctgttttgagtcattgttacctgttcttagtcaaaaa 175  Q
    ||||| |||||||||| ||||||||||||  ||| ||||||||||||||||||||||||| |||||||||| |||||| |||  |||| |||||||||||    
T  46624858 atatgtttgtaacatgtatagtcattttatggaa-aatattaatcttcctaactctcatccttctgttttgggtcattattagttgttattagtcaaaaa 46624956  T
Q  176 tcaggttttcgggctacttgatcggattgctccgaaacatacccagaaaatcagaa 231  Q
    ||   |||| || ||||||||||| ||||||||||||| |  ||||||||||||||    
T  46624957 tctaatttttggactacttgatcgaattgctccgaaacttggccagaaaatcagaa 46625012  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #27
Raw Score: 65; E-Value: 2e-28
Query Start/End: Original strand, 109 - 271
Target Start/End: Original strand, 51492969 - 51493137
Alignment:
Q  109 acaatattaatcttcctaactctcatcattctgttttgagtcattgttacctgttcttagt-caaaaatcaggttttcgggctacttgatcggattgctc 207  Q
    ||||||||||||||||||||||||||| || ||||||  |||||||||| |||||||||||  ||||||  |||||| || |||||||||| ||||||||    
T  51492969 acaatattaatcttcctaactctcatccttatgtttttggtcattgttagctgttcttagtaaaaaaattgggtttttggcctacttgatcagattgctc 51493068  T
Q  208 cgaaacatacccagaaaatcaga-----aaaaattcaaggatcatgactcccgtagaagggacttctta 271  Q
    |||||| | |||||||||| |||     ||||| |||||||||| |||| |||||||| | ||||||||    
T  51493069 cgaaacttccccagaaaattagagagagaaaaaatcaaggatcaagacttccgtagaaagaacttctta 51493137  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #28
Raw Score: 63; E-Value: 3e-27
Query Start/End: Original strand, 141 - 235
Target Start/End: Original strand, 33439383 - 33439477
Alignment:
Q  141 gttttgagtcattgttacctgttcttagtcaaaaatcaggttttcgggctacttgatcggattgctccgaaacatacccagaaaatcagaaaaaa 235  Q
    |||||| ||||||||||| | |||||||| ||||||||| ||||||| ||||||||||||||||||||||||| | |||||||||||||||||||    
T  33439383 gttttgggtcattgttactttttcttagttaaaaatcagattttcggactacttgatcggattgctccgaaacttgcccagaaaatcagaaaaaa 33439477  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #29
Raw Score: 60; E-Value: 2e-25
Query Start/End: Original strand, 181 - 316
Target Start/End: Original strand, 4394221 - 4394355
Alignment:
Q  181 ttttcgggctacttgatcggattgctccgaaacatacccagaaaatcagaaaaaattcaaggatcatgactcccgtagaagggacttcttacattgactc 280  Q
    ||||||| |||||||||| |||||||||||||| | |||||||||||| |||||| ||||||| |||||||||||||||||| |||| ||||   || ||    
T  4394221 ttttcggactacttgatcagattgctccgaaactttcccagaaaatcaaaaaaaaatcaaggaccatgactcccgtagaaggaactttttac-gggattc 4394319  T
Q  281 tgcccctcaaaataaaaaattacatcatttagaccc 316  Q
     ||||||||||||  |||||| |||| |||||||||    
T  4394320 cgcccctcaaaatccaaaattccatcgtttagaccc 4394355  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #30
Raw Score: 60; E-Value: 2e-25
Query Start/End: Original strand, 76 - 315
Target Start/End: Complemental strand, 14828940 - 14828700
Alignment:
Q  76 atatgcttgtaacatggatagtcattttagagaacaatattaatcttcctaactctcatcattctgttttgagtcattgttacctgttcttagtca-aaa 174  Q
    ||||| || ||||||||||| | |||||| || | ||||||||||||| |||| ||||||  ||||||||| ||| ||||||  |||||||||||| |||    
T  14828940 atatgtttataacatggataataatttta-aggataatattaatcttcataaccctcatccatctgttttgggtccttgttagttgttcttagtcaaaaa 14828842  T
Q  175 atcaggttttcgggctacttgatcggattgctccgaaacatacccagaaaatcagaaaaaat--tcaaggatcatgactcccgtagaagggacttcttac 272  Q
    ||| | |||||||  |||||||| ||||||||||||||| | |||| ||||||  |||||||  |||||||||| || |||  |||||| ||||||||||    
T  14828841 atctgattttcggattacttgattggattgctccgaaactttcccataaaatcgaaaaaaataatcaaggatcaagattcctctagaagagacttcttac 14828742  T
Q  273 attgactctgcccctcaaaataaaaaattacatcatttagacc 315  Q
    |  ||||| |||  |||||||  |||||| |||| ||||||||    
T  14828741 a-ggactccgcctttcaaaatccaaaattccatcgtttagacc 14828700  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #31
Raw Score: 54; E-Value: 7e-22
Query Start/End: Original strand, 112 - 293
Target Start/End: Original strand, 51816387 - 51816567
Alignment:
Q  112 atattaatcttcctaactctcatcattctgttttgagtcattgttacctgttcttagtcaaaaatcaggttttcgggctacttgatcggattgctccgaa 211  Q
    |||||||||||| ||||| ||||| |  ||||||  ||||||||||  ||||| ||||| |||||   |||||| || ||||||||| ||||||||||||    
T  51816387 atattaatcttcataactatcatcctcatgttttaggtcattgttagttgttcctagtcgaaaatatagttttctggttacttgatcagattgctccgaa 51816486  T
Q  212 acatacccagaaaatcagaaaaaattcaaggatcatgactcccgtagaagggacttcttacattgactctgcccctcaaaat 293  Q
    |  | |||| ||||| |||||||| ||||||||||  || ||| ||||| |||||||||||   ||||||||||||||||||    
T  51816487 atttccccaaaaaataagaaaaaaatcaaggatcaaaacacccctagaatggacttcttac-gggactctgcccctcaaaat 51816567  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #32
Raw Score: 51; E-Value: 4e-20
Query Start/End: Original strand, 111 - 317
Target Start/End: Original strand, 29048514 - 29048707
Alignment:
Q  111 aatattaatcttcctaactctcatcattctgttttgagtcattgttacctgttcttagtc-aaaaatcaggttttcgggctacttgatcggattgctccg 209  Q
    ||||||||||||| ||||||| ||| || ||||||  |||||||||| |||||||||||  ||||||| ||||||| |||||||||||||||||||| ||    
T  29048514 aatattaatcttcataactcttatccttatgttttaggtcattgttaactgttcttagtataaaaatctggttttcaggctacttgatcggattgcttcg 29048613  T
Q  210 aaacatacccagaaaatcagaaaaaattcaaggatcatgactcccgtagaagggacttcttacattgactctgcccctcaaaataaaaaattacatcatt 309  Q
    |||            |  ||||||||| ||||||||| ||||||||||||| |||||| ||||   ||||| ||||||||||||  |||||| |||| ||    
T  29048614 aaa------------acaagaaaaaat-caaggatcaagactcccgtagaaaggacttattac-gggactccgcccctcaaaatccaaaattccatcgtt 29048699  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #33
Raw Score: 49; E-Value: 7e-19
Query Start/End: Original strand, 82 - 206
Target Start/End: Complemental strand, 5127914 - 5127791
Alignment:
Q  82 ttgtaacatggatagtcattttagagaacaatattaatcttcctaactctcatcattctgttttgagtcattgttacctgttcttagtcaaaaatcaggt 181  Q
    ||||||||||||||  |||||||  || |||||||||||||| || ||||||||  | ||||||| ||||||||||  ||||||| |||||||||| |||    
T  5127914 ttgtaacatggatatccattttatgga-caatattaatcttcatagctctcatccatttgttttgcgtcattgttagttgttcttggtcaaaaatctggt 5127816  T
Q  182 tttcgggctacttgatcggattgct 206  Q
    |||||| ||||||||| | ||||||    
T  5127815 tttcggactacttgattgaattgct 5127791  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #34
Raw Score: 45; E-Value: 2e-16
Query Start/End: Original strand, 82 - 146
Target Start/End: Original strand, 33438665 - 33438728
Alignment:
Q  82 ttgtaacatggatagtcattttagagaacaatattaatcttcctaactctcatcattctgttttg 146  Q
    |||||| ||||||||||||||||| || |||||||||||||||||||||||||| ||||||||||    
T  33438665 ttgtaatatggatagtcattttaggga-caatattaatcttcctaactctcatccttctgttttg 33438728  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #35
Raw Score: 44; E-Value: 7e-16
Query Start/End: Original strand, 112 - 231
Target Start/End: Complemental strand, 54229883 - 54229764
Alignment:
Q  112 atattaatcttcctaactctcatcattctgttttgagtcattgttacctgttcttagtcaaaaatcaggttttcgggctacttgatcggattgctccgaa 211  Q
    |||||||||||||| |||| ||||||| |||| |  ||||||||||  |||| ||||||||||||  |||||||  ||||||||||| |||||||| |||    
T  54229883 atattaatcttccttactcgcatcattatgttctaggtcattgttagttgttattagtcaaaaattcggttttcttgctacttgatcagattgctctgaa 54229784  T
Q  212 acatacccagaaaatcagaa 231  Q
    || | |||| ||||| ||||    
T  54229783 acttccccaaaaaataagaa 54229764  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #36
Raw Score: 43; E-Value: 0.000000000000003
Query Start/End: Original strand, 82 - 164
Target Start/End: Original strand, 29035943 - 29036024
Alignment:
Q  82 ttgtaacatggatagtcattttagagaacaatattaatcttcctaactctcatcattctgttttgagtcattgttacctgttc 164  Q
    |||||||||||||| |||||||| || || |||||| |||||||||||||||||||| ||||||  |||||||||| ||||||    
T  29035943 ttgtaacatggataatcatttta-aggaccatattactcttcctaactctcatcattatgttttaggtcattgttaactgttc 29036024  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #37
Raw Score: 43; E-Value: 0.000000000000003
Query Start/End: Original strand, 112 - 272
Target Start/End: Complemental strand, 50384462 - 50384298
Alignment:
Q  112 atattaatcttcctaactctcatcattctgttttgagtcattgttacctgttcttagtcaaaaa-tcaggttttcgggctacttgatcggattgctccga 210  Q
    |||||||||||  ||||||| ||| |||||||||  ||||||||||  | |||||||| ||||| |   |||||||| | |||||||| |||||||||||    
T  50384462 atattaatctttataactctaatccttctgttttatgtcattgttagttattcttagtaaaaaaatgcagttttcggtccacttgatcagattgctccga 50384363  T
Q  211 aacatacccagaaaatc---agaaaaaattcaaggatcatgactcccgtagaagggacttcttac 272  Q
    ||| | |||| ||||||   | |||||| |||||||| | ||||||  |||||||||||||||||    
T  50384362 aacttccccaaaaaatcataaaaaaaaaatcaaggataaagactccattagaagggacttcttac 50384298  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #38
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 109 - 228
Target Start/End: Complemental strand, 4300269 - 4300150
Alignment:
Q  109 acaatattaatcttcctaactctcatcattctgttttgagtcattgttacctgttcttagtcaaaaatcaggttttcgggctacttgatcggattgctcc 208  Q
    ||||||||||||||||||||| ||||| || ||| ||  ||||||||||  |||||||||| |||||||  ||||| |||||  |||||  ||||||||     
T  4300269 acaatattaatcttcctaactatcatccttttgtattaggtcattgttagatgttcttagtaaaaaatccagtttttgggcttattgattagattgctct 4300170  T
Q  209 gaaacatacccagaaaatca 228  Q
     |||| | ||||||||||||    
T  4300169 aaaacttccccagaaaatca 4300150  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #39
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 82 - 213
Target Start/End: Original strand, 47769406 - 47769536
Alignment:
Q  82 ttgtaacatggatagtcattttagagaacaatattaatcttcctaactctcatcattctgttttgagtcattgttacctgttcttagtcaaaaatcaggt 181  Q
    ||||||||||||||||||||||| ||||  |||||||||||  ||||| |||||||||| ||||  ||||||||||  |||||  |||| ||||   | |    
T  47769406 ttgtaacatggatagtcatttta-agaatcatattaatctttttaactatcatcattctattttaggtcattgttagttgttcccagtcgaaaaaatgat 47769504  T
Q  182 tttcgggctacttgatcggattgctccgaaac 213  Q
     |||||| || ||||||||||||||| |||||    
T  47769505 attcgggttatttgatcggattgctcagaaac 47769536  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #40
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 112 - 207
Target Start/End: Complemental strand, 43472255 - 43472159
Alignment:
Q  112 atattaatcttcctaactctcatcattctgttttgagtcattgttacctgttcttagtcaaaaa-tcaggttttcgggctacttgatcggattgctc 207  Q
    |||||||| ||  ||||||  ||| ||||||||||| ||| ||||| ||||||||||| ||||| || ||||| |||||||||||||| ||||||||    
T  43472255 atattaatttttttaactcaaatccttctgttttgaatcaatgttagctgttcttagtaaaaaaatccggtttacgggctacttgatcagattgctc 43472159  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #41
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 82 - 145
Target Start/End: Original strand, 8735537 - 8735599
Alignment:
Q  82 ttgtaacatggatagtcattttagagaacaatattaatcttcctaactctcatcattctgtttt 145  Q
    ||||||||| ||||||||||||| || ||||||||||||||||||||| ||||| || ||||||    
T  8735537 ttgtaacattgatagtcatttta-aggacaatattaatcttcctaactttcatccttgtgtttt 8735599  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #42
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 82 - 145
Target Start/End: Original strand, 9087778 - 9087840
Alignment:
Q  82 ttgtaacatggatagtcattttagagaacaatattaatcttcctaactctcatcattctgtttt 145  Q
    ||||||||| ||||||||||||| || ||||||||||||||||||||| ||||| || ||||||    
T  9087778 ttgtaacattgatagtcatttta-aggacaatattaatcttcctaactttcatccttgtgtttt 9087840  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #43
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 85 - 133
Target Start/End: Complemental strand, 26053533 - 26053485
Alignment:
Q  85 taacatggatagtcattttagagaacaatattaatcttcctaactctca 133  Q
    |||| |||||||||||||||| |||||||| |||||||||||| |||||    
T  26053533 taacttggatagtcattttagggaacaatactaatcttcctaattctca 26053485  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #44
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 82 - 145
Target Start/End: Complemental strand, 33842089 - 33842027
Alignment:
Q  82 ttgtaacatggatagtcattttagagaacaatattaatcttcctaactctcatcattctgtttt 145  Q
    |||||| |||||||||||||||| || ||||||||||| ||| ||||||||||| || ||||||    
T  33842089 ttgtaatatggatagtcatttta-aggacaatattaatgttcgtaactctcatccttgtgtttt 33842027  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #45
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 230 - 311
Target Start/End: Complemental strand, 34009962 - 34009882
Alignment:
Q  230 aaaaaattcaaggatcatgactcccgtagaagggacttcttacattgactctgcccctcaaaataaaaaattacatcattta 311  Q
    |||||| ||| |||||| ||||  |||||||||||||||||||  |||||| ||||| ||||||  |||||| |||||||||    
T  34009962 aaaaaaatcatggatcaagactttcgtagaagggacttcttac-gtgactccgccccccaaaatccaaaattccatcattta 34009882  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #46
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 85 - 134
Target Start/End: Complemental strand, 47980018 - 47979970
Alignment:
Q  85 taacatggatagtcattttagagaacaatattaatcttcctaactctcat 134  Q
    |||||| ||||||||||||| || |||||||||||||| |||||||||||    
T  47980018 taacatagatagtcatttta-aggacaatattaatctttctaactctcat 47979970  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #47
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 187 - 215
Target Start/End: Original strand, 147512 - 147540
Alignment:
Q  187 ggctacttgatcggattgctccgaaacat 215  Q
    |||||||||||||||||||||||||||||    
T  147512 ggctacttgatcggattgctccgaaacat 147540  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #48
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 159 - 235
Target Start/End: Original strand, 11266451 - 11266526
Alignment:
Q  159 ctgttcttagtcaaaaatcaggttttcgggctacttgatcggattgctccgaaacatacccagaaaatcagaaaaaa 235  Q
    ||||||||||||||||||  | |||| ||| || |||||| ||||| |||||||| | || ||||||||||||||||    
T  11266451 ctgttcttagtcaaaaattcgattttgggg-tatttgatcagattgatccgaaactttcctagaaaatcagaaaaaa 11266526  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #49
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 82 - 126
Target Start/End: Original strand, 45244534 - 45244577
Alignment:
Q  82 ttgtaacatggatagtcattttagagaacaatattaatcttccta 126  Q
    ||||||||||| ||||||||||| || ||||||||||||||||||    
T  45244534 ttgtaacatggttagtcatttta-aggacaatattaatcttccta 45244577  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4 (Bit Score: 152; Significance: 2e-80; HSPs: 55)
Name: chr4
Description:

Target: chr4; HSP #1
Raw Score: 152; E-Value: 2e-80
Query Start/End: Original strand, 82 - 313
Target Start/End: Original strand, 8106545 - 8106775
Alignment:
Q  82 ttgtaacatggatagtcattttagagaacaatattaatcttcctaactctcatcattctgttttgagtcattgttacctgttcttagtcaaaaatcaggt 181  Q
    |||||||||||||||||||||||||||||||| |||||||| |||||||||||| ||||||||||||||||||||||||||||||| |||||||||||||    
T  8106545 ttgtaacatggatagtcattttagagaacaatgttaatctttctaactctcatccttctgttttgagtcattgttacctgttcttattcaaaaatcaggt 8106644  T
Q  182 tttcgggctacttgatcggattgctccgaaacatacccagaaaatcagaaaaaattcaaggatcatgactcccgtagaagggacttcttacattgactct 281  Q
    ||| ||||||||||||| |||| ||||||||| | |||| ||||||||||||||||||||||||||||||||||||||||| |||||||||   |||||     
T  8106645 ttttgggctacttgatcagattactccgaaacttccccaaaaaatcagaaaaaattcaaggatcatgactcccgtagaaggaacttcttac-gggactcc 8106743  T
Q  282 gcccctcaaaataaaaaattacatcatttaga 313  Q
    ||| |||||||| |||||||| ||| ||||||    
T  8106744 gcctctcaaaatcaaaaattaaatcgtttaga 8106775  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #2
Raw Score: 140; E-Value: 3e-73
Query Start/End: Original strand, 82 - 317
Target Start/End: Original strand, 19835672 - 19835905
Alignment:
Q  82 ttgtaacatggatagtcattttagagaacaatattaatcttcctaactctcatcattctgttttgagtcattgttacctgttcttagtcaaaaatcaggt 181  Q
    |||||||||||||||||||||||| ||||||||||||||||||||||||||||| |||||||||| |||||||||||||||| |||||||||| || |||    
T  19835672 ttgtaacatggatagtcattttag-gaacaatattaatcttcctaactctcatctttctgttttgcgtcattgttacctgtttttagtcaaaagtcgggt 19835770  T
Q  182 tttcgggctacttgatcggattgctccgaaacatacccagaaaatcagaaaaaattcaaggatcatgactcccgtagaagggacttcttacattgactct 281  Q
    |||||| ||||||||||||||||||||||||| | ||||||||||||||||||||||||| | |||||||||| || ||||||||||||||   |||||     
T  19835771 tttcggactacttgatcggattgctccgaaactttcccagaaaatcagaaaaaattcaagtaccatgactcccctaaaagggacttcttac-gggactcc 19835869  T
Q  282 gcccctcaaaataaaaaattacatcatttagaccca 317  Q
    ||||||||||||  |||||| |||  ||||||||||    
T  19835870 gcccctcaaaatccaaaattccattgtttagaccca 19835905  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #3
Raw Score: 131; E-Value: 8e-68
Query Start/End: Original strand, 109 - 315
Target Start/End: Complemental strand, 54631481 - 54631276
Alignment:
Q  109 acaatattaatcttcctaactctcatcattctgttttgagtcattgttacctgttcttagtcaaaaatcaggttttcgggctacttgatcggattgctcc 208  Q
    ||||||||||||||||||||||||||| |||||||||| |||||||||||||||||||||||||||||| ||||||||| ||||||||||||||||||||    
T  54631481 acaatattaatcttcctaactctcatccttctgttttgggtcattgttacctgttcttagtcaaaaatcgggttttcggactacttgatcggattgctcc 54631382  T
Q  209 gaaacatacccagaaaatcagaaaaaattcaaggatcatgactcccgtagaagggacttcttacattgactctgcccctcaaaataaaaaattacatcat 308  Q
     |||| | ||||||||||||||||||||||||||| |||||||||| ||||| |||||||||||   ||||| || |||||||||| |||||| |||| |    
T  54631381 aaaacttccccagaaaatcagaaaaaattcaaggaccatgactcccatagaaaggacttcttac-gggactccgcacctcaaaatacaaaattccatcgt 54631283  T
Q  309 ttagacc 315  Q
    |||||||    
T  54631282 ttagacc 54631276  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #4
Raw Score: 126; E-Value: 8e-65
Query Start/End: Original strand, 82 - 271
Target Start/End: Complemental strand, 27742129 - 27741940
Alignment:
Q  82 ttgtaacatggatagtcattttagagaacaatattaatcttcctaactctcatcattctgttttgagtcattgttacctgttcttagtcaaaaatcaggt 181  Q
    |||||||||  ||||| ||||||| ||||||||||||||||||||||||||||| |||||||||||||||||| ||| | |||||||||||||||| |||    
T  27742129 ttgtaacataaatagttattttagggaacaatattaatcttcctaactctcatccttctgttttgagtcattggtacattttcttagtcaaaaatcgggt 27742030  T
Q  182 tttcgggctacttgatcggattgctccgaaacatacccagaaaatcagaaaaaattcaaggatcatgactcccgtagaagggacttctta 271  Q
    ||||||||||||| |||||||||||||||||||| ||| |||||||||||||||||  ||||||||| ||||||||||||| ||||||||    
T  27742029 tttcgggctacttaatcggattgctccgaaacatcccccgaaaatcagaaaaaattggaggatcatgcctcccgtagaaggaacttctta 27741940  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #5
Raw Score: 125; E-Value: 3e-64
Query Start/End: Original strand, 82 - 317
Target Start/End: Complemental strand, 25752459 - 25752225
Alignment:
Q  82 ttgtaacatggatagtcattttagagaacaatattaatcttcctaactctcatcattctgtttt-gagtcattgttacctgttcttagtcaaaaatcagg 180  Q
    ||||||||||||||||||||||| || ||||||| |||||||||| |||||||| || |||||| | || ||||||||||||||||||||||||||| ||    
T  25752459 ttgtaacatggatagtcatttta-aggacaatatcaatcttcctagctctcatctttatgtttttgggtgattgttacctgttcttagtcaaaaatcggg 25752361  T
Q  181 ttttcgggctacttgatcggattgctccgaaacatacccagaaaatcagaaaaaattcaaggatcatgactcccgtagaagggacttcttacattgactc 280  Q
    |||||||||||||||||| |||||||||||||| | ||||||||||||||||| ||||||||| |||||||||| |||||| ||||||||||   |||||    
T  25752360 ttttcgggctacttgatcagattgctccgaaacttccccagaaaatcagaaaagattcaaggaccatgactcccttagaagagacttcttac-gggactc 25752262  T
Q  281 tgcccctcaaaataaaaaattacatcatttagaccca 317  Q
     ||||||||||||  |||||| |||| ||||||||||    
T  25752261 cgcccctcaaaatccaaaattccatcgtttagaccca 25752225  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #6
Raw Score: 124; E-Value: 1e-63
Query Start/End: Original strand, 82 - 293
Target Start/End: Complemental strand, 2506046 - 2505837
Alignment:
Q  82 ttgtaacatggatagtcattttagagaacaatattaatcttcctaactctcatcattctgttttgagtcattgttacctgttcttagtcaaaaatcaggt 181  Q
    |||||||||||||||||||||||| || |||||||||||||||||| ||||||| |||||||||| ||||||||||| ||||||||||||| |||| |||    
T  2506046 ttgtaacatggatagtcattttaggga-caatattaatcttcctaattctcatccttctgttttgggtcattgttacatgttcttagtcaataatcgggt 2505948  T
Q  182 tttcgggctacttgatcggattgctccgaaacatacccagaaaatcagaaaaaattcaaggatcatgactcccgtagaagggacttcttacattgactct 281  Q
    |||||||||||||||||||||||||||||||| | | ||||||| ||||||| ||||||||| ||||||||||  ||||||||||||||||   || |||    
T  2505947 tttcgggctacttgatcggattgctccgaaactttctcagaaaagcagaaaacattcaaggaccatgactccccaagaagggacttcttac-gggattct 2505849  T
Q  282 gcccctcaaaat 293  Q
    ||||||||||||    
T  2505848 gcccctcaaaat 2505837  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #7
Raw Score: 124; E-Value: 1e-63
Query Start/End: Original strand, 82 - 317
Target Start/End: Complemental strand, 48319079 - 48318846
Alignment:
Q  82 ttgtaacatggatagtcattttagagaacaatattaatcttcctaactctcatcattctgttttgagtcattgttacctgttcttagtcaaaaatcaggt 181  Q
    ||||||||| |||||||||||||| || |||||||||||||||||||||||||| |||||||||| |||||||||| || |||||||| ||||||| | |    
T  48319079 ttgtaacattgatagtcattttaggga-caatattaatcttcctaactctcatccttctgttttgggtcattgttatctattcttagtaaaaaatcggat 48318981  T
Q  182 tttcgggctacttgatcggattgctccgaaacatacccagaaaatcagaaaaaattcaaggatcatgactcccgtagaagggacttcttacattgactct 281  Q
    |||||| |||||||||||||||||| |||||  | ||||||||||||||||||||||||||| |||||||| | | ||||||||||||||||  |||||     
T  48318980 tttcggactacttgatcggattgcttcgaaatttccccagaaaatcagaaaaaattcaaggaccatgactctcctggaagggacttcttaca-ggactcc 48318882  T
Q  282 gcccctcaaaataaaaaattacatcatttagaccca 317  Q
    ||||||||||||  |||||| |||| ||||||||||    
T  48318881 gcccctcaaaatccaaaattccatcgtttagaccca 48318846  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #8
Raw Score: 120; E-Value: 3e-61
Query Start/End: Original strand, 82 - 317
Target Start/End: Original strand, 40703816 - 40704049
Alignment:
Q  82 ttgtaacatggatagtcattttagagaacaatattaatcttcctaactctcatcattctgttttgagtcattgttacctgttcttagtcaaaaatcaggt 181  Q
    |||||||||||||||||||||||| || |||||||||||||||||||||||||| |||||||||| |||||||||| || |||||||||||||||| |||    
T  40703816 ttgtaacatggatagtcattttaggga-caatattaatcttcctaactctcatccttctgttttgggtcattgttatcttttcttagtcaaaaatcgggt 40703914  T
Q  182 tttcgggctacttgatcggattgctccgaaacatacccagaaaatcagaaaaaattcaaggatcatgactcccgtagaagggacttcttacattgactct 281  Q
    ||| || ||||||||||||||||||  ||||| | ||||||||||||||||||||||||||| ||||||| |  ||||||| |||||||||   |||||     
T  40703915 ttttggactacttgatcggattgctaagaaacttccccagaaaatcagaaaaaattcaaggaccatgacttcattagaaggaacttcttac-gggactcc 40704013  T
Q  282 gcccctcaaaataaaaaattacatcatttagaccca 317  Q
    ||||||||||||  |||||| |||| |||| |||||    
T  40704014 gcccctcaaaatctaaaattccatcgtttaaaccca 40704049  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #9
Raw Score: 120; E-Value: 3e-61
Query Start/End: Original strand, 82 - 317
Target Start/End: Complemental strand, 53894040 - 53893808
Alignment:
Q  82 ttgtaacatggatagtcattttagagaacaatattaatcttcctaactctcatcattctgttttgagtcattgttacctgttcttagtcaaaaatcaggt 181  Q
    |||||||||||||||||||||||| || ||||||||||||| |||||||||||| |||||||||| |||||||||||||||||||||||||||||| |||    
T  53894040 ttgtaacatggatagtcattttaggga-caatattaatctttctaactctcatccttctgttttgggtcattgttacctgttcttagtcaaaaatcgggt 53893942  T
Q  182 tttcgggctacttgatcggattgctccgaaacatacccagaaaatcagaaaaaattcaaggatcatgactcccgtagaagggacttcttacattgactct 281  Q
    |||| | ||||||||||||||||||| ||||| | || ||||||||||||||||||  |||| ||| |||||||||||||||||||||||    | |||     
T  53893941 tttcagactacttgatcggattgctctgaaac-ttccgagaaaatcagaaaaaatttcaggaccatcactcccgtagaagggacttctta-tgggtctcc 53893844  T
Q  282 gcccctcaaaataaaaaattacatcatttagaccca 317  Q
    ||||||||||||  |||||| |||| ||||||||||    
T  53893843 gcccctcaaaatccaaaatttcatcgtttagaccca 53893808  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #10
Raw Score: 118; E-Value: 5e-60
Query Start/End: Original strand, 82 - 271
Target Start/End: Original strand, 32441962 - 32442150
Alignment:
Q  82 ttgtaacatggatagtcattttagagaacaatattaatcttcctaactctcatcattctgttttgagtcattgttacctgttcttagtcaaaaatcaggt 181  Q
    |||||||||| |||  ||||||| ||| |||||||||||||||||||||| ||| || ||||||| ||||||||||||||||||||||||||||||  ||    
T  32441962 ttgtaacatgtataaccattttaaaga-caatattaatcttcctaactcttatccttttgttttgggtcattgttacctgttcttagtcaaaaatcgagt 32442060  T
Q  182 tttcgggctacttgatcggattgctccgaaacatacccagaaaatcagaaaaaattcaaggatcatgactcccgtagaagggacttctta 271  Q
    |||||||||||||||||||||||||| ||||| | ||||||||||||||||||||||||||| |||||||||| |||||| |||||||||    
T  32442061 tttcgggctacttgatcggattgctctgaaacttccccagaaaatcagaaaaaattcaaggaccatgactcccttagaagagacttctta 32442150  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #11
Raw Score: 117; E-Value: 2e-59
Query Start/End: Original strand, 82 - 314
Target Start/End: Original strand, 7931809 - 7932038
Alignment:
Q  82 ttgtaacatggatagtcattttagagaacaatattaatcttcctaactctcatcattctgttttgagtcattgttacctgttcttagtcaaaaatcaggt 181  Q
    |||||||||||||||| ||||||| || |||||||||||||||||||||||||| | |||||||| ||||||||||| |||| || ||||||||||  ||    
T  7931809 ttgtaacatggatagttattttaggga-caatattaatcttcctaactctcatcct-ctgttttgggtcattgttacatgtttttggtcaaaaatcgagt 7931906  T
Q  182 tttcgggctacttgatcggattgctccgaaacatacccagaaaatcagaaaaaattcaaggatcatgactcccgtagaagggacttcttacattgactct 281  Q
    |||||| ||||||| |||||||||| |||||| | ||||||||||||||||||||||||||| |||||||||| |||||||||||||||||   |||||     
T  7931907 tttcggactacttggtcggattgcttcgaaactttcccagaaaatcagaaaaaattcaaggaccatgactcccctagaagggacttcttac-gggactcc 7932005  T
Q  282 gcccctcaaaataaaaaattacatcatttagac 314  Q
    ||||||||||||  |||||| |||| |||||||    
T  7932006 gcccctcaaaatccaaaattccatcgtttagac 7932038  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #12
Raw Score: 116; E-Value: 7e-59
Query Start/End: Original strand, 82 - 269
Target Start/End: Complemental strand, 25491410 - 25491224
Alignment:
Q  82 ttgtaacatggatagtcattttagagaacaatattaatcttcctaactctcatcattctgttttgagtcattgttacctgttcttagtcaaaaatcaggt 181  Q
    |||||||||| ||||||||||||  || |||||||||||||||||||||||||| |||||||||| ||||||||||| |||||||||||||||||| |||    
T  25491410 ttgtaacatgaatagtcattttatgga-caatattaatcttcctaactctcatccttctgttttgggtcattgttacatgttcttagtcaaaaatcgggt 25491312  T
Q  182 tttcgggctacttgatcggattgctccgaaacatacccagaaaatcagaaaaaattcaaggatcatgactcccgtagaagggacttct 269  Q
    ||| || |||||||||||||||||||| |||  | |||||||||||||||||| |||||||| |||||||||| ||||||||||||||    
T  25491311 ttttggactacttgatcggattgctccaaaatttccccagaaaatcagaaaaagttcaaggaccatgactcccttagaagggacttct 25491224  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #13
Raw Score: 114; E-Value: 1e-57
Query Start/End: Original strand, 82 - 271
Target Start/End: Complemental strand, 17933152 - 17932964
Alignment:
Q  82 ttgtaacatggatagtcattttagagaacaatattaatcttcctaactctcatcattctgttttgagtcattgttacctgttcttagtcaaaaatcaggt 181  Q
    |||||||||||||| ||||||||| || || ||||||||||||||||||||||| |||||||||| |||||||||||||||||||||| ||||||||| |    
T  17933152 ttgtaacatggataatcattttaggga-cattattaatcttcctaactctcatccttctgttttgggtcattgttacctgttcttagtaaaaaatcagat 17933054  T
Q  182 tttcgggctacttgatcggattgctccgaaacatacccagaaaatcagaaaaaattcaaggatcatgactcccgtagaagggacttctta 271  Q
    |||| | | ||||||||||||||||||||||| |  |||||||||||||||||||||||||| |||||||||| ||||| | ||||||||    
T  17933053 tttcagaccacttgatcggattgctccgaaacttctccagaaaatcagaaaaaattcaaggaccatgactcccttagaaagaacttctta 17932964  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #14
Raw Score: 113; E-Value: 4e-57
Query Start/End: Original strand, 82 - 317
Target Start/End: Original strand, 38536322 - 38536556
Alignment:
Q  82 ttgtaacatggatagtcattttagagaacaatattaatcttcctaactctcatcattctgttttgag-tcattgttacctgttcttagtcaaaaatcagg 180  Q
    |||||||||| ||||||||||||  || ||||||||||||||||||||||||| |||||||||| || |||||||||| ||||||||||||||||||| |    
T  38536322 ttgtaacatgaatagtcattttatgga-caatattaatcttcctaactctcattattctgtttttaggtcattgttacatgttcttagtcaaaaatcaag 38536420  T
Q  181 ttttcgggctacttgatcggattgctccgaaacatacccagaaaatcagaaaaaattcaaggatcatgactcccgtagaagggacttcttacattgactc 280  Q
    ||||| |||||||||||||||||| ||| |||| | ||||||||||||||||||||||||||| ||| |||||  ||||| ||||||||||    |||||    
T  38536421 ttttcaggctacttgatcggattgttccaaaactttcccagaaaatcagaaaaaattcaaggaccataactcctttagaaaggacttctta-tgggactc 38536519  T
Q  281 tgcccctcaaaataaaaaattacatcatttagaccca 317  Q
     ||||||||||||  |||||| |||| ||||||||||    
T  38536520 cgcccctcaaaatccaaaattccatcgtttagaccca 38536556  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #15
Raw Score: 110; E-Value: 3e-55
Query Start/End: Original strand, 84 - 317
Target Start/End: Complemental strand, 6228826 - 6228595
Alignment:
Q  84 gtaacatggatagtcattttagagaacaatattaatcttcctaactctcatcattctgttttgagtcattgttacctgttcttagtcaaaaatcaggttt 183  Q
    |||||||| |||| |||||||| || |||||||||||||||||||||| ||| || ||||||| |||||||||||||||||||||||||||||  |||||    
T  6228826 gtaacatgtatagccattttaggga-caatattaatcttcctaactcttatccttttgttttgggtcattgttacctgttcttagtcaaaaattgggttt 6228728  T
Q  184 tcgggctacttgatcggattgctccgaaacatacccagaaaatcagaaaaaattcaaggatcatgactcccgtagaagggacttcttacattgactctgc 283  Q
    |||||||| |||||||||||||||  |||| | || | |||||||||||||||||||| | |||||||||||||||||| ||||||||||  |||||  |    
T  6228727 tcgggctatttgatcggattgctctaaaacttcccaaaaaaatcagaaaaaattcaagaaccatgactcccgtagaaggaacttcttaca-ggactcctc 6228629  T
Q  284 ccctcaaaataaaaaattacatcatttagaccca 317  Q
    ||||||||||  |||||| |||  ||||||||||    
T  6228628 ccctcaaaatccaaaattccattgtttagaccca 6228595  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #16
Raw Score: 110; E-Value: 3e-55
Query Start/End: Original strand, 82 - 314
Target Start/End: Complemental strand, 25538994 - 25538763
Alignment:
Q  82 ttgtaacatggatagtcattttagagaacaatattaatcttcctaactctcatcattctgtttt-gagtcattgttacctgttcttagtcaaaaatcagg 180  Q
    |||||||||||||||||||||||| || |||||||||| ||| ||||||||||| ||| ||||| | ||||||||||||| |||||||||||||||  ||    
T  25538994 ttgtaacatggatagtcattttaggga-caatattaattttcttaactctcatccttccgtttttgggtcattgttacctcttcttagtcaaaaatttgg 25538896  T
Q  181 ttttcgggctacttgatcggattgctccgaaacatacccagaaaatcagaaaaaattcaaggatcatgactcccgtagaagggacttcttacattgactc 280  Q
    ||||| ||||||||||| ||||| ||||||||||| |||||||||||||||||| |||||||| |||||||||| |||||| ||||||||||   |||||    
T  25538895 ttttcaggctacttgattggatttctccgaaacatccccagaaaatcagaaaaatttcaaggaacatgactcccttagaagagacttcttac-gggactc 25538797  T
Q  281 tgcccctcaaaataaaaaattacatcatttagac 314  Q
     ||||||||||||  |||||  |||| |||||||    
T  25538796 cgcccctcaaaatccaaaataccatcgtttagac 25538763  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #17
Raw Score: 108; E-Value: 4e-54
Query Start/End: Original strand, 82 - 314
Target Start/End: Complemental strand, 46440289 - 46440057
Alignment:
Q  82 ttgtaacatggatagtcattttagagaacaatattaatcttcctaactctcatcattctgttttgagtcattgttacctgt--tcttagtcaaaaatcag 179  Q
    |||||||||||||| ||||||||| || ||||| |||||||| ||||||||||| |||| ||||   ||||||||||||||  ||||| ||||||||| |    
T  46440289 ttgtaacatggatattcattttaggga-caatactaatcttcataactctcatccttctcttttagatcattgttacctgtgttcttaatcaaaaatcgg 46440191  T
Q  180 gttttcgggctacttgatcggattgctccgaaacatacccagaaaatcagaaaaaattcaaggatcatgactcccgtagaagggacttcttacattgact 279  Q
     ||||||| ||||||||||||||||||||||||| | ||||||||||||||||||||||||||| ||||||||||  ||||||||||||||||   ||||    
T  46440190 attttcggactacttgatcggattgctccgaaacttccccagaaaatcagaaaaaattcaaggaccatgactcccaaagaagggacttcttac-gggact 46440092  T
Q  280 ctgcccctcaaaataaaaaattacatcatttagac 314  Q
    | ||||||||||||  |||||| |||| |||||||    
T  46440091 ccgcccctcaaaatccaaaatttcatcgtttagac 46440057  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #18
Raw Score: 107; E-Value: 2e-53
Query Start/End: Original strand, 82 - 272
Target Start/End: Original strand, 52089337 - 52089526
Alignment:
Q  82 ttgtaacatggatagtcattttagagaacaatattaatcttcctaactctcatcattctgttttgagtcattgttacctgttcttagtcaaaaatcaggt 181  Q
    |||||||||||||||||||||| | || |||||||||| ||||||||| ||||  ||||| |||| |||||||||||||||||||||||||||||| |||    
T  52089337 ttgtaacatggatagtcatttttggga-caatattaattttcctaactttcattcttctggtttgggtcattgttacctgttcttagtcaaaaatcgggt 52089435  T
Q  182 tttcgggctacttgatcggattgctccgaaacatacccagaaaatcagaaaaaattcaaggatcatgactcccgtagaagggacttcttac 272  Q
    ||| || |||||||||||||||||| | |||| | ||||||||||||||||||||||||||| ||| |||| | |||||||||||||||||    
T  52089436 ttttggactacttgatcggattgcttcaaaacttccccagaaaatcagaaaaaattcaaggaccataactctcatagaagggacttcttac 52089526  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #19
Raw Score: 101; E-Value: 6e-50
Query Start/End: Original strand, 93 - 293
Target Start/End: Complemental strand, 6003677 - 6003479
Alignment:
Q  93 atagtcattttagagaacaatattaatcttcctaactctcatcattctgttttgagtcattgttacctgttcttagtcaaaaatcaggttttcgggctac 192  Q
    ||||||||||||| ||  ||||||||||||||||||||| ||| || ||||||| ||||||||||| |||||||||||||||||||||||||||||||||    
T  6003677 atagtcattttagggat-aatattaatcttcctaactcttatccttttgttttgggtcattgttacttgttcttagtcaaaaatcaggttttcgggctac 6003579  T
Q  193 ttgatcggattgctccgaaacatacccagaaaatcagaaaaaattcaaggatcatgactcccgtagaagggacttcttacattgactctgcccctcaaaa 292  Q
    ||||| ||||||||| ||||| | |||| ||||||||||||||||||| || ||||||| || || ||||| ||||||||   ||||| |||||||||||    
T  6003578 ttgattggattgctctgaaactttcccaaaaaatcagaaaaaattcaaagaccatgacttccataaaaggggcttcttac-gggactccgcccctcaaaa 6003480  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #20
Raw Score: 101; E-Value: 6e-50
Query Start/End: Original strand, 126 - 314
Target Start/End: Original strand, 29822775 - 29822962
Alignment:
Q  126 aactctcatcattctgttttgagtcattgttacctgttcttagtcaaaaatcaggttttcgggctacttgatcggattgctccgaaacatacccagaaaa 225  Q
    |||||||||| |||||||||| ||||||||||| |||||||| ||||||||  | |||||||||||||||||||||||||||  |||| | |||||| ||    
T  29822775 aactctcatccttctgttttgggtcattgttacatgttcttaatcaaaaattggattttcgggctacttgatcggattgctcaaaaacttgcccagacaa 29822874  T
Q  226 tcagaaaaaattcaaggatcatgactcccgtagaagggacttcttacattgactctgcccctcaaaataaaaaattacatcatttagac 314  Q
    |||||||||||||||||| |||||||||||||||||||||||| |||   ||||||||||||||||||  |||||| |||| |||||||    
T  29822875 tcagaaaaaattcaaggaccatgactcccgtagaagggacttcctac-gggactctgcccctcaaaattcaaaattccatcgtttagac 29822962  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #21
Raw Score: 99; E-Value: 1e-48
Query Start/End: Original strand, 109 - 271
Target Start/End: Original strand, 49397190 - 49397351
Alignment:
Q  109 acaatattaatcttcctaactctcatcattctgttttgagtcattgttacctgttcttagtcaaaaatcaggttttcgggctacttgatcggattgctcc 208  Q
    ||||||||||||||||||||||| ||| || ||||||||||||||||||| |||||||||||||||||| |||||||| ||||||||||||||||||||     
T  49397190 acaatattaatcttcctaactcttatccttttgttttgagtcattgttacatgttcttagtcaaaaatcgggttttcgagctacttgatcggattgctct 49397289  T
Q  209 gaaacatacccagaaaatcagaaaaaattcaaggatcatgactcccgtagaagggacttctta 271  Q
    ||||| | |||| |||||||||||||||||||||| ||||||||||  |||||  ||||||||    
T  49397290 gaaac-ttcccaaaaaatcagaaaaaattcaaggaccatgactccctaagaagaaacttctta 49397351  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #22
Raw Score: 96; E-Value: 6e-47
Query Start/End: Original strand, 82 - 317
Target Start/End: Original strand, 34973016 - 34973249
Alignment:
Q  82 ttgtaacatggatagtcattttagagaacaatattaatcttcctaactctcatcattctgttttgagtcattgttacctgttcttagtcaaaaatcaggt 181  Q
    |||||||||| |||| |||||||| || |||||||||||||||||||||| ||| || ||||||  |||||||||| ||||||||||||||||||| |||    
T  34973016 ttgtaacatgtatagccattttaggga-caatattaatcttcctaactcttatccttttgttttaggtcattgttatctgttcttagtcaaaaatcgggt 34973114  T
Q  182 tttcgggctacttgatcggattgctccgaaacatacccagaaaatcagaaaaaattcaaggatcatgactcccgtagaagggacttcttacattgactct 281  Q
    |||| | ||||||||||||||||||| ||||| | || | ||||| |||||||||||||||| |||||||| | || |||||||||||| |   |||||     
T  34973115 tttcagactacttgatcggattgctctgaaacttccctataaaattagaaaaaattcaaggaccatgactctcctaaaagggacttctttc-gggactcc 34973213  T
Q  282 gcccctcaaaataaaaaattacatcatttagaccca 317  Q
    ||||||||||||  |||||| |||  ||||||||||    
T  34973214 gcccctcaaaatccaaaattccattgtttagaccca 34973249  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #23
Raw Score: 95; E-Value: 2e-46
Query Start/End: Original strand, 82 - 317
Target Start/End: Complemental strand, 31582437 - 31582212
Alignment:
Q  82 ttgtaacatggatagtcattttagagaacaatattaatcttcctaactctcatcattctgttttgagtcattgttacctgttcttagtcaaaaatcaggt 181  Q
    |||||||||||||||||||||||  ||||||| ||||| ||||||||||||||| |||||||||| ||||||||||| ||||||||||||||||||  ||    
T  31582437 ttgtaacatggatagtcattttat-gaacaatgttaattttcctaactctcatccttctgttttgggtcattgttacatgttcttagtcaaaaatctagt 31582339  T
Q  182 tttcgggctacttgatcggattgctccgaaacatacccagaaaatcagaaaaaattcaaggatcatgactcccgtagaagggacttcttacattgactct 281  Q
    |||||||||| ||||||||||||||||||||| | ||||||       ||||||||||| || ||||| | || |||||||||||||||   | || ||     
T  31582338 tttcgggctaattgatcggattgctccgaaacttgcccaga-------aaaaaattcaaagaccatgatttccttagaagggacttctt--ttggattcc 31582248  T
Q  282 gcccctcaaaataaaaaattacatcatttagaccca 317  Q
    ||||||||||||  |||||| |||| ||||||||||    
T  31582247 gcccctcaaaatccaaaattccatcgtttagaccca 31582212  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #24
Raw Score: 89; E-Value: 9e-43
Query Start/End: Original strand, 82 - 234
Target Start/End: Complemental strand, 41413113 - 41412962
Alignment:
Q  82 ttgtaacatggatagtcattttagagaacaatattaatcttcctaactctcatcattctgttttgagtcattgttacctgttcttagtcaaaaatcaggt 181  Q
    |||||||||| ||||||||||||| ||||||||||||||||||||||||| |||||| ||||||  ||||||||||| |||||||| ||||||||| |||    
T  41413113 ttgtaacatgtatagtcattttag-gaacaatattaatcttcctaactcttatcattttgttttaggtcattgttacatgttcttaatcaaaaatctggt 41413015  T
Q  182 tttcgggctacttgatcggattgctccgaaacatacccagaaaatcagaaaaa 234  Q
    ||||||||||||||||| ||||| || ||||| | |||| |||||||||||||    
T  41413014 tttcgggctacttgatcagattgttctgaaacttccccaaaaaatcagaaaaa 41412962  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #25
Raw Score: 83; E-Value: 4e-39
Query Start/End: Original strand, 82 - 272
Target Start/End: Complemental strand, 41323107 - 41322918
Alignment:
Q  82 ttgtaacatggatagtcattttagagaacaatattaatcttcctaactctcatcattctgttttgagtcattgttacctgttcttagtcaaaaatcaggt 181  Q
    |||||||||||||| ||||||||  || |||||||||||||||||||||||||| || ||||||  ||||||||||  |||||||||| ||||||   ||    
T  41323107 ttgtaacatggataatcattttatgga-caatattaatcttcctaactctcatccttttgtttttggtcattgttaattgttcttagttaaaaattgagt 41323009  T
Q  182 tttcgggctacttgatcggattgctccgaaacatacccagaaaatcagaaaaaattcaaggatcatgactcccgtagaagggacttcttac 272  Q
    ||||||  |||||||||||||||||||||||  | |||||||||||| |||||||||| |||||| || ||  ||||||| ||||||||||    
T  41323008 tttcggcatacttgatcggattgctccgaaagttccccagaaaatcataaaaaattcacggatcaagattcttgtagaagagacttcttac 41322918  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #26
Raw Score: 78; E-Value: 3e-36
Query Start/End: Original strand, 133 - 313
Target Start/End: Complemental strand, 49001525 - 49001341
Alignment:
Q  133 atcattctgttttgagtcattgttacctgttcttagtcaaaaatcaggttttcgggctacttgatcggattgctccgaaacatacccagaaaatcagaa- 231  Q
    |||||||| ||||| |||||||||| |||||| |||||||||||| | ||||||||||||||||||||||||||||||||  |  ||||||||||||||     
T  49001525 atcattctattttgggtcattgttaactgttcatagtcaaaaatctgattttcgggctacttgatcggattgctccgaaaattctccagaaaatcagaag 49001426  T
Q  232 ----aaaattcaaggatcatgactcccgtagaagggacttcttacattgactctgcccctcaaaataaaaaattacatcatttaga 313  Q
        ||||  ||||||||||||||||| |||||||||||||||||   ||||| || |||||||||  ||||||||||| ||||||    
T  49001425 aaaaaaaaaacaaggatcatgactcccttagaagggacttcttac-gggactccgctcctcaaaatccaaaattacatcgtttaga 49001341  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #27
Raw Score: 78; E-Value: 3e-36
Query Start/End: Original strand, 82 - 232
Target Start/End: Complemental strand, 55052634 - 55052484
Alignment:
Q  82 ttgtaacatggatagtcattttagagaacaatattaatcttcctaactctcatcattc--tgttttgagtcattgttacctgttcttagtcaaaaatcag 179  Q
    |||||||||||||||||||||||| || |||| ||||||||||||||| ||||| |||  | ||||| ||||||||||||||||||||||||||||||      
T  55052634 ttgtaacatggatagtcattttaggga-caatgttaatcttcctaactatcatccttccattttttg-gtcattgttacctgttcttagtcaaaaatcga 55052537  T
Q  180 gttttcgggctacttgatcggattgctccgaaacatacccagaaaatcagaaa 232  Q
     ||||||||||||||||| ||||||||||||||| | || |||||||||||||    
T  55052536 attttcgggctacttgattggattgctccgaaacttccctagaaaatcagaaa 55052484  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #28
Raw Score: 73; E-Value: 3e-33
Query Start/End: Original strand, 112 - 271
Target Start/End: Original strand, 47456781 - 47456945
Alignment:
Q  112 atattaatcttcctaactctcatcattctgttttgagtcattgttacctgttcttagtcaaaaatcaggttttcgggctacttgatcggattgctccgaa 211  Q
    |||||||||||||||| ||||||| || ||||||  ||||||||||  | |||||||||||||||  |||||||||||||||||||| ||||||||||||    
T  47456781 atattaatcttcctaaatctcatccttatgttttaggtcattgttagatattcttagtcaaaaattcggttttcgggctacttgatcagattgctccgaa 47456880  T
Q  212 acatacccagaaaatcag-----aaaaaattcaaggatcatgactcccgtagaagggacttctta 271  Q
    || | |||||||||||||     |||||| |||||||||| ||||||  |||||| |||||||||    
T  47456881 acttccccagaaaatcagaagaaaaaaaaatcaaggatcaagactcctctagaagagacttctta 47456945  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #29
Raw Score: 71; E-Value: 5e-32
Query Start/End: Original strand, 82 - 271
Target Start/End: Complemental strand, 3703264 - 3703082
Alignment:
Q  82 ttgtaacatggatagtcattttagagaacaatattaatcttcctaactctcatcattctgttttgagtcattgttacctgttcttagtcaaaaatcaggt 181  Q
    ||||||||| |||||||||||||| ||| ||||||||||||| ||||||||||| |||||||||  |||| ||||||||  | ||||||||||||| | |    
T  3703264 ttgtaacatagatagtcattttag-gaagaatattaatcttcataactctcatccttctgttttaggtcaatgttacctacttttagtcaaaaatcggat 3703166  T
Q  182 tttcgggctacttgatcggattgctccgaaacatacccagaaaatcagaaaaaattcaaggatcatgactcccgtagaagggacttctta 271  Q
    ||||||||||      ||||||||||| |||| |  ||| ||||||| ||||||||||| ||||||||||||| |||||  |||||||||    
T  3703165 tttcgggcta------cggattgctccaaaacttctccaaaaaatcaaaaaaaattcaaagatcatgactcccttagaaatgacttctta 3703082  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #30
Raw Score: 71; E-Value: 5e-32
Query Start/End: Original strand, 82 - 235
Target Start/End: Complemental strand, 14474226 - 14474075
Alignment:
Q  82 ttgtaacatggatagtcattttagagaacaatattaatcttcctaactctcatcattctgttttgagtcattgttacctgttcttagtcaaaaatcaggt 181  Q
    ||||||||||||||||| ||| |||  |||||||||||||||||||| |||||| |||| ||||  |||||||||||||||||||  |||||||||  ||    
T  14474226 ttgtaacatggatagtcgtttaaga--acaatattaatcttcctaaccctcatccttctattttaggtcattgttacctgttcttgatcaaaaatcctgt 14474129  T
Q  182 tttcgggctacttgatcggattgctccgaaacatacccagaaaatcagaaaaaa 235  Q
    ||||  |||||||||||||||||||||||||| |   ||||||||||| |||||    
T  14474128 tttcaagctacttgatcggattgctccgaaactttttcagaaaatcaggaaaaa 14474075  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #31
Raw Score: 68; E-Value: 3e-30
Query Start/End: Original strand, 160 - 315
Target Start/End: Original strand, 38417021 - 38417174
Alignment:
Q  160 tgttcttagtcaaaaatcaggttttcgggctacttgatcggattgctccgaaacatacccagaaaatcagaaaaaattcaaggatcatgactcccgtaga 259  Q
    |||||||||||||||||| |||||||| |||||||||||||| |||||  |||| | |||| ||||| || ||||||||||||| |||||||| ||||||    
T  38417021 tgttcttagtcaaaaatcgggttttcgagctacttgatcggagtgctctaaaacttccccaaaaaattag-aaaaattcaaggaccatgactcacgtaga 38417119  T
Q  260 agggacttcttacattgactctgcccctcaaaataaaaaattacatcatttagacc 315  Q
    ||||||||||||||  ||||| |||| |||||||  |||||| |||| ||||||||    
T  38417120 agggacttcttaca-ggactccgcccttcaaaatccaaaatttcatcgtttagacc 38417174  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #32
Raw Score: 60; E-Value: 2e-25
Query Start/End: Original strand, 181 - 316
Target Start/End: Complemental strand, 18051106 - 18050972
Alignment:
Q  181 ttttcgggctacttgatcggattgctccgaaacatacccagaaaatcagaaaaaattcaaggatcatgactcccgtagaagggacttcttacattgactc 280  Q
    ||||||| |||||||||| |||||||||||||| | |||||||||||| |||||| ||||||| |||||||||||||||||| |||| ||||   || ||    
T  18051106 ttttcggactacttgatcagattgctccgaaactttcccagaaaatcaaaaaaaaatcaaggaccatgactcccgtagaaggaactttttac-gggattc 18051008  T
Q  281 tgcccctcaaaataaaaaattacatcatttagaccc 316  Q
     ||||||||||||  |||||| |||| |||||||||    
T  18051007 cgcccctcaaaatccaaaattccatcgtttagaccc 18050972  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #33
Raw Score: 56; E-Value: 5e-23
Query Start/End: Original strand, 112 - 270
Target Start/End: Complemental strand, 48095853 - 48095690
Alignment:
Q  112 atattaatcttcctaactctcatcattctgttttgagtcattgttacctgttcttagtcaaaaatcaggttttcgggctacttgatcggattgctccgaa 211  Q
    |||||||||||||||| | ||||||| |||||||  ||||||||||  | || ||||||||||||| |||||||||||||||| |||  |||||| ||||    
T  48095853 atattaatcttcctaattttcatcatcctgttttaggtcattgttagttatttttagtcaaaaatctggttttcgggctactttatcatattgcttcgaa 48095754  T
Q  212 acatacccagaaaatc-----agaaaaaattcaaggatcatgactcccgtagaagggacttctt 270  Q
    || | |||| ||||||     | |||||| |||||||||| |||||  ||||||||||||||||    
T  48095753 acttccccataaaatctgaagaaaaaaaaatcaaggatcaagactcatgtagaagggacttctt 48095690  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #34
Raw Score: 55; E-Value: 2e-22
Query Start/End: Original strand, 82 - 212
Target Start/End: Original strand, 7863593 - 7863722
Alignment:
Q  82 ttgtaacatggatagtcattttagagaacaatattaatcttcctaactctcatcattctgttttgagtcattgttacctgttcttagtcaaaaatcaggt 181  Q
    |||||||||||| | |||||||| || ||||||||||| ||||||||| | ||| |||||||||  ||||||| || ||||||||| | ||||||  |||    
T  7863593 ttgtaacatggacaatcatttta-aggacaatattaatattcctaacttttatccttctgttttaggtcattggtaactgttcttaataaaaaattcggt 7863691  T
Q  182 tttcgggctacttgatcggattgctccgaaa 212  Q
    ||||||||||||| ||| |||||||||||||    
T  7863692 tttcgggctacttaatcagattgctccgaaa 7863722  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #35
Raw Score: 51; E-Value: 4e-20
Query Start/End: Original strand, 85 - 272
Target Start/End: Original strand, 372074 - 372262
Alignment:
Q  85 taacatggatagtcattttagagaacaatattaatcttcc--taactctcatcattctgttttgagtcattgttacctgttcttagtcaaaaatcaggtt 182  Q
    |||||||||||||||||||| ||| || ||||||| |||   ||| | ||||| |||||||||| ||||||||||  | ||||||||||||||||   ||    
T  372074 taacatggatagtcattttaaagacca-tattaatattctcataattttcatccttctgttttgggtcattgttagttcttcttagtcaaaaatccaatt 372172  T
Q  183 ttcgggctacttgatcggattgctccgaaacatacccagaaaatcagaaaaaattcaaggatcatgactcccgtagaagggacttcttac 272  Q
    ||| | ||| || || |||||||| |||||| | |||||||| ||| |||||| |||| ||||| |||| || || ||||||||||||||    
T  372173 ttcagactaattaattggattgctacgaaactttcccagaaactcacaaaaaaatcaaagatcaagacttccttataagggacttcttac 372262  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #36
Raw Score: 47; E-Value: 1e-17
Query Start/End: Original strand, 218 - 308
Target Start/End: Original strand, 52089541 - 52089630
Alignment:
Q  218 ccagaaaatcagaaaaaattcaaggatcatgactcccgtagaagggacttcttacattgactctgcccctcaaaataaaaaattacatcat 308  Q
    |||||||||||||||||||||||||| ||| |||||| |||||||||||||||||   ||||| ||||||||||||  |||||| ||||||    
T  52089541 ccagaaaatcagaaaaaattcaaggaccataactcccatagaagggacttcttac-gggactccgcccctcaaaatccaaaattccatcat 52089630  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #37
Raw Score: 46; E-Value: 4e-17
Query Start/End: Original strand, 85 - 162
Target Start/End: Original strand, 47873965 - 47874041
Alignment:
Q  85 taacatggatagtcattttagagaacaatattaatcttcctaactctcatcattctgttttgagtcattgttacctgt 162  Q
    ||||||||||||||||||||| || |||||||||||||| ||| ||||||| ||||||||||  ||||||||||||||    
T  47873965 taacatggatagtcattttaggga-caatattaatcttcttaattctcatccttctgttttggatcattgttacctgt 47874041  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #38
Raw Score: 43; E-Value: 0.000000000000003
Query Start/End: Original strand, 129 - 231
Target Start/End: Original strand, 37222159 - 37222260
Alignment:
Q  129 tctcatcattctgttttgagtcattgttacctgttcttagtcaaaaatcaggttttcgggctacttgatcggattgctccgaaacatacccagaaaatca 228  Q
    |||||||||||||||||| ||||||||||  |||||||||| ||||||  |||| ||||| ||| ||||| |||||||||||||| |   ||||||||||    
T  37222159 tctcatcattctgttttgggtcattgttagttgttcttagtaaaaaattcggttctcggggtac-tgatcagattgctccgaaacttttacagaaaatca 37222257  T
Q  229 gaa 231  Q
    |||    
T  37222258 gaa 37222260  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #39
Raw Score: 43; E-Value: 0.000000000000003
Query Start/End: Original strand, 82 - 272
Target Start/End: Original strand, 47784141 - 47784326
Alignment:
Q  82 ttgtaacatggatagtcattttagagaacaatattaatcttcctaactctcatcattctgttttgagtcattgttacctgttcttagtcaaaa-atcagg 180  Q
    |||||| |||||||||||||||| || ||||||||||||| ||||||||||||   ||||||||||||||||||||  ||     | |||||| || ||     
T  47784141 ttgtaatatggatagtcatttta-aggacaatattaatct-cctaactctcattcatctgttttgagtcattgttagttg-----actcaaaacattagc 47784233  T
Q  181 t--tttcgggctacttgatcggattgctccgaaacatacccagaaaatcagaaaaaattcaaggatcatgactcccgtagaagggacttcttac 272  Q
    |  |||||||||| ||||| ||||||||||||| | | |||| |||||||||||||| | ||| ||||  ||||||||| ||| ||||||||||    
T  47784234 taatttcgggctatttgataggattgctccgaatcttccccaaaaaatcagaaaaaa-taaagcatcagaactcccgtaaaagagacttcttac 47784326  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #40
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 222 - 317
Target Start/End: Original strand, 23524078 - 23524172
Alignment:
Q  222 aaaatcagaaaaaattcaaggatcatgactcccgtagaagggacttcttacattgactctgcccctcaaaataaaaaattacatcatttagaccca 317  Q
    |||||||||||||||||||||| ||||||||||| ||||||||||| |||    ||||  ||||||||||||  |||||| ||| |||||||||||    
T  23524078 aaaatcagaaaaaattcaaggaccatgactcccgaagaagggacttatta-tgggacttcgcccctcaaaatccaaaatttcattatttagaccca 23524172  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #41
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 82 - 135
Target Start/End: Complemental strand, 25140521 - 25140469
Alignment:
Q  82 ttgtaacatggatagtcattttagagaacaatattaatcttcctaactctcatc 135  Q
    |||||||||| ||| |||||||| ||||||||||||||||||||||||||||||    
T  25140521 ttgtaacatgtataatcatttta-agaacaatattaatcttcctaactctcatc 25140469  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #42
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 78 - 175
Target Start/End: Original strand, 27879696 - 27879792
Alignment:
Q  78 atgcttgtaacatggatagtcattttagagaacaatattaatcttcctaactctcatcattctgttttgagtcattgttacctgttcttagtcaaaaa 175  Q
    |||||||||||||| || ||||||||| || || |||||||| |||||||||||||| ||| ||||||   |||||||||  ||||| ||||||||||    
T  27879696 atgcttgtaacatgaatggtcatttta-aggaccatattaatattcctaactctcataattttgttttagatcattgttagttgttcctagtcaaaaa 27879792  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #43
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 112 - 203
Target Start/End: Original strand, 1788175 - 1788269
Alignment:
Q  112 atattaatcttcctaactctcatcattctgttttgagtcattgttacctgttcttagt---caaaaatcaggttttcgggctacttgatcggatt 203  Q
    |||||||||||| ||||||||||  |||||||||  ||||||||||| ||||||||||    |||||||  ||||||||| ||||||||| ||||    
T  1788175 atattaatcttcataactctcattcttctgttttaggtcattgttacttgttcttagtaaaaaaaaatctagttttcgggatacttgatcagatt 1788269  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #44
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 151 - 208
Target Start/End: Complemental strand, 4936675 - 4936618
Alignment:
Q  151 attgttacctgttcttagtcaaaaatcaggttttcgggctacttgatcggattgctcc 208  Q
    ||||||| ||||||||||| ||||||| | |||| |||||| ||||||||||||||||    
T  4936675 attgttagctgttcttagttaaaaatctgatttttgggctatttgatcggattgctcc 4936618  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #45
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 112 - 213
Target Start/End: Original strand, 20078729 - 20078830
Alignment:
Q  112 atattaatcttcctaactctcatcattctgttttgagtcattgttacctgttcttagtcaaaaatcaggttttcgggctacttgatcggattgctccgaa 211  Q
    |||||||| |||||| ||| |||| |||||||||  ||||||||||    ||||||||  |||||| |||||| |||||||||||||  ||||||| |||    
T  20078729 atattaatattcctagctcgcatccttctgttttaggtcattgttagtctttcttagtttaaaatctggtttttgggctacttgatcaaattgctctgaa 20078828  T
Q  212 ac 213  Q
    ||    
T  20078829 ac 20078830  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #46
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 82 - 135
Target Start/End: Complemental strand, 25140730 - 25140678
Alignment:
Q  82 ttgtaacatggatagtcattttagagaacaatattaatcttcctaactctcatc 135  Q
    |||||||||||||||||||||| ||| |||||||||||||||||| || |||||    
T  25140730 ttgtaacatggatagtcatttt-gaggacaatattaatcttcctagctttcatc 25140678  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #47
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 82 - 223
Target Start/End: Complemental strand, 55138163 - 55138023
Alignment:
Q  82 ttgtaacatggatagtcattttagagaacaatattaatcttcctaactctcatcattctgttttgagtcattgttacctgttcttagtcaaaaatcaggt 181  Q
    |||||| ||||||||||| |||| ||| | |||||||||||||||| | | ||| ||||||||   || ||||||   |||||| ||||||||||  |||    
T  55138163 ttgtaatatggatagtcagtttaaaga-ctatattaatcttcctaaattttatctttctgtttaaggttattgtttgttgttctcagtcaaaaattcggt 55138065  T
Q  182 tttcgggctacttgatcggattgctccgaaacatacccagaa 223  Q
    ||||| |||| ||||||  |||| |||||||| | |||||||    
T  55138064 tttcgtgctatttgatcatattgatccgaaactttcccagaa 55138023  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #48
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 82 - 126
Target Start/End: Complemental strand, 25140937 - 25140894
Alignment:
Q  82 ttgtaacatggatagtcattttagagaacaatattaatcttccta 126  Q
    ||||||||||||||||||||||| || ||||||||||||||||||    
T  25140937 ttgtaacatggatagtcatttta-aggacaatattaatcttccta 25140894  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #49
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 112 - 228
Target Start/End: Complemental strand, 55838978 - 55838862
Alignment:
Q  112 atattaatcttcctaactctcatcattctgttttgagtcattgttacctgttcttagtcaaaaatcaggttttcgggctacttgatcggattgctccgaa 211  Q
    |||||||||| ||||||||| ||| || ||||||  ||||||||||  |||||  |||| |||||  |||||||||||||||| | | ||||||||  ||    
T  55838978 atattaatctccctaactctaatccttatgttttaggtcattgttagttgttcccagtcgaaaatttggttttcgggctacttaaccagattgctctaaa 55838879  T
Q  212 acatacccagaaaatca 228  Q
    || | ||| ||||||||    
T  55838878 actttccctgaaaatca 55838862  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #50
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 82 - 145
Target Start/End: Complemental strand, 27181535 - 27181474
Alignment:
Q  82 ttgtaacatggatagtcattttagagaacaatattaatcttcctaactctcatcattctgtttt 145  Q
    ||||||||||||||||||||||| | || |||||||||| |||||||||||||| || ||||||    
T  27181535 ttgtaacatggatagtcatttta-aaaataatattaatc-tcctaactctcatccttgtgtttt 27181474  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #51
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 112 - 187
Target Start/End: Complemental strand, 46381154 - 46381079
Alignment:
Q  112 atattaatcttcctaactctcatcattctgttttgagtcattgttacctgttcttagtcaaaaatcaggttttcgg 187  Q
    |||||||||||| ||||||||||  ||| |||||   |||||||||  | |||||||||||||||| |||||||||    
T  46381154 atattaatcttcataactctcattcttcagttttagatcattgttagttattcttagtcaaaaatctggttttcgg 46381079  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #52
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 190 - 253
Target Start/End: Original strand, 51515815 - 51515877
Alignment:
Q  190 tacttgatcggattgctccgaaacatacccagaaaatcagaaaaaattcaaggatcatgactcc 253  Q
    |||||||||  ||||||||||||| | |||||||||||| |||||| ||||| |||||||||||    
T  51515815 tacttgatcatattgctccgaaactttcccagaaaatcacaaaaaa-tcaagaatcatgactcc 51515877  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #53
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 112 - 157
Target Start/End: Complemental strand, 42497862 - 42497817
Alignment:
Q  112 atattaatcttcctaactctcatcattctgttttgagtcattgtta 157  Q
    ||||||||||| ||||||||||||||| ||||||  ||||||||||    
T  42497862 atattaatctttctaactctcatcattttgttttaggtcattgtta 42497817  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #54
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 77 - 177
Target Start/End: Complemental strand, 37770080 - 37769981
Alignment:
Q  77 tatgcttgtaacatggatagtcattttagagaacaatattaatcttcctaactctcatcattctgttttgagtcattgttacctgttcttagtcaaaaat 176  Q
    |||| |||||||||| ||||||| ||||  || || ||||||||| |||||||||| || || | |||| ||||||||||| | ||| ||||| ||||||    
T  37770080 tatgtttgtaacatgaatagtcaatttaatgacca-tattaatctccctaactctcgtccttttattttaagtcattgttagcagtttttagttaaaaat 37769982  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #55
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 82 - 138
Target Start/End: Complemental strand, 42660390 - 42660335
Alignment:
Q  82 ttgtaacatggatagtcattttagagaacaatattaatcttcctaactctcatcatt 138  Q
    |||||| || ||||||||||||| || |||||||||||||||||| || ||||||||    
T  42660390 ttgtaatattgatagtcatttta-aggacaatattaatcttcctagctttcatcatt 42660335  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7 (Bit Score: 139; Significance: 1e-72; HSPs: 40)
Name: chr7
Description:

Target: chr7; HSP #1
Raw Score: 139; E-Value: 1e-72
Query Start/End: Original strand, 78 - 272
Target Start/End: Original strand, 19818520 - 19818713
Alignment:
Q  78 atgcttgtaacatggatagtcattttagagaacaatattaatcttcctaactctcatcattctgttttgagtcattgttacctgttcttagtcaaaaatc 177  Q
    |||||||||||||||||||| ||||||| || |||||||||||||||||||||||||| |||||||||| ||||||||||||||||||| ||| ||||||    
T  19818520 atgcttgtaacatggatagttattttaggga-caatattaatcttcctaactctcatccttctgttttgggtcattgttacctgttcttggtcgaaaatc 19818618  T
Q  178 aggttttcgggctacttgatcggattgctccgaaacatacccagaaaatcagaaaaaattcaaggatcatgactcccgtagaagggacttcttac 272  Q
     |||||| || ||||||||||||||||||||||||| | ||||||||||||||||||||||||||| ||||||||||||||||||||||||||||    
T  19818619 gggtttttggactacttgatcggattgctccgaaactttcccagaaaatcagaaaaaattcaaggaccatgactcccgtagaagggacttcttac 19818713  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #2
Raw Score: 133; E-Value: 5e-69
Query Start/End: Original strand, 82 - 317
Target Start/End: Complemental strand, 42925656 - 42925422
Alignment:
Q  82 ttgtaacatggatagtcattttagagaacaatattaatcttcctaactctcatcattctgttttgag-tcattgttacctgttcttagtcaaaaatcagg 180  Q
    |||||||||||||||||||||||| || |||||||||||||||||||||||||| ||| |||||  | |||||||||| |||||||||||||||||  ||    
T  42925656 ttgtaacatggatagtcattttaggga-caatattaatcttcctaactctcatccttccgtttttggatcattgttacttgttcttagtcaaaaattggg 42925558  T
Q  181 ttttcgggctacttgatcggattgctccgaaacatacccagaaaatcagaaaaaattcaaggatcatgactcccgtagaagggacttcttacattgactc 280  Q
    ||||||||||||||||||||||||||||||||| |||||||||||||||||| |||||||||| |||||||||| ||||||||||||||||    |||||    
T  42925557 ttttcgggctacttgatcggattgctccgaaacttacccagaaaatcagaaacaattcaaggaccatgactcccttagaagggacttctta-tgggactc 42925459  T
Q  281 tgcccctcaaaataaaaaattacatcatttagaccca 317  Q
     ||||||||||||  |||||| |||| ||||||||||    
T  42925458 cgcccctcaaaatccaaaattccatcgtttagaccca 42925422  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #3
Raw Score: 127; E-Value: 2e-65
Query Start/End: Original strand, 76 - 317
Target Start/End: Complemental strand, 42865123 - 42864883
Alignment:
Q  76 atatgcttgtaacatggatagtcattttagagaacaatattaatcttcctaactctcatcattctgttttgagtcattgttacctgttcttagtcaaaaa 175  Q
    ||||| |||||||||||||||||||||||| || |||||||||||||||||||||||||| |||||||||| |||||||| |||||||||| ||||||||    
T  42865123 atatgtttgtaacatggatagtcattttaggga-caatattaatcttcctaactctcatccttctgttttgggtcattgtcacctgttcttggtcaaaaa 42865025  T
Q  176 tcaggttttcgggctacttgatcggattgctccgaaacatacccagaaaatcagaaaaaattcaaggatcatgactcccgtag-aagggacttcttacat 274  Q
    |||||||||||| ||||||||||||||||||| ||||||| |||||||||| ||||| |||||||||| |||||||||| ||| ||| |||||||||       
T  42865024 tcaggttttcggactacttgatcggattgctctgaaacatccccagaaaattagaaacaattcaaggaccatgactcccttagaaagagacttctta-tg 42864926  T
Q  275 tgactctgcccctcaaaataaaaaattacatcatttagaccca 317  Q
     ||||| ||||||||||||  ||||||  ||| ||||||||||    
T  42864925 ggactccgcccctcaaaatccaaaattcaatcgtttagaccca 42864883  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #4
Raw Score: 124; E-Value: 1e-63
Query Start/End: Original strand, 82 - 313
Target Start/End: Complemental strand, 19225613 - 19225384
Alignment:
Q  82 ttgtaacatggatagtcattttagagaacaatattaatcttcctaactctcatcattctgttttgagtcattgttacctgttcttagtcaaaaatcaggt 181  Q
    |||||||||||||| ||||||||  ||  | ||| ||||||||||||||||||| |||||||||| ||||||||||||  ||||||||||||||||||||    
T  19225613 ttgtaacatggatattcattttatggatga-tataaatcttcctaactctcatccttctgttttgggtcattgttacccattcttagtcaaaaatcaggt 19225515  T
Q  182 tttcgggctacttgatcggattgctccgaaacatacccagaaaatcagaaaaaattcaaggatcatgactcccgtagaagggacttcttacattgactct 281  Q
    |||||| ||| ||||||||||||||||||||| | ||||||||||||||||||||||||||| |||||||||| ||||||| ||||||||||  |||||     
T  19225514 tttcggactatttgatcggattgctccgaaacttccccagaaaatcagaaaaaattcaaggaacatgactcccatagaaggaacttcttaca-ggactcc 19225416  T
Q  282 gcccctcaaaataaaaaattacatcatttaga 313  Q
    ||||||||||||  |||||| |||| ||||||    
T  19225415 gcccctcaaaatccaaaattccatcgtttaga 19225384  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #5
Raw Score: 122; E-Value: 2e-62
Query Start/End: Original strand, 111 - 272
Target Start/End: Original strand, 36629375 - 36629536
Alignment:
Q  111 aatattaatcttcctaactctcatcattctgttttgagtcattgttacctgttcttagtcaaaaatcaggttttcgggctacttgatcggattgctccga 210  Q
    ||||||||||||||||||||||||| ||||||||||  ||| ||||||||| ||||||||||||||| ||||||||||||||||||||||||||||||||    
T  36629375 aatattaatcttcctaactctcatccttctgttttggctcactgttacctggtcttagtcaaaaatcgggttttcgggctacttgatcggattgctccga 36629474  T
Q  211 aacatacccagaaaatcagaaaaaattcaaggatcatgactcccgtagaagggacttcttac 272  Q
    ||| | |||| |||||||||||||||||||||| ||||||||||||||||||||||||||||    
T  36629475 aacttccccaaaaaatcagaaaaaattcaaggaccatgactcccgtagaagggacttcttac 36629536  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #6
Raw Score: 121; E-Value: 7e-62
Query Start/End: Original strand, 82 - 317
Target Start/End: Complemental strand, 36468552 - 36468321
Alignment:
Q  82 ttgtaacatggatagtcattttagagaacaatattaatcttcctaactctcatcattctgttttgagtcattgttacctgttcttagtcaaaaatcaggt 181  Q
    |||||||||||||||||||||||| ||||||||||||||||| ||||||||||| |||||||||| ||||||||||| |||||||||| ||||||| |||    
T  36468552 ttgtaacatggatagtcattttag-gaacaatattaatcttcataactctcatccttctgttttgggtcattgttacatgttcttagtaaaaaatcgggt 36468454  T
Q  182 tttcgggctacttgatcggattgctccgaaacatacccagaaaatcagaaaaaattcaaggatcatgactcccgtagaagggacttcttacattgactct 281  Q
    |||||||||||||||||||||||||||||||| | |||||||||||||  ||||||| |||| || ||||||| |  ||||||||||||||   |||||     
T  36468453 tttcgggctacttgatcggattgctccgaaacttccccagaaaatcag--aaaattcgaggaccacgactccctttaaagggacttcttac-gggactcc 36468357  T
Q  282 gcccctcaaaataaaaaattacatcatttagaccca 317  Q
    ||||||||| ||  |||||| |||| ||||||||||    
T  36468356 gcccctcaagattcaaaatttcatcgtttagaccca 36468321  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #7
Raw Score: 117; E-Value: 2e-59
Query Start/End: Original strand, 89 - 317
Target Start/End: Original strand, 43737233 - 43737459
Alignment:
Q  89 atggatagtcattttagagaacaatattaatcttcctaactctcatcattctgttttgagtcattgttacctgttcttagtcaaaaatcaggttttcggg 188  Q
    ||||||||||||||||| || |||||||||||||||||||||| ||| || ||||||| ||||||||||| |||||||||| ||||| | ||||||||||    
T  43737233 atggatagtcattttaggga-caatattaatcttcctaactctgatccttatgttttgggtcattgttacatgttcttagttaaaaaccgggttttcggg 43737331  T
Q  189 ctacttgatcggattgctccgaaacatacccagaaaatcagaaaaaattcaaggatcatgactcccgtagaagggacttcttacattgactctgcccctc 288  Q
    ||||||||||||||||||||||||  | ||||||||||||||||||||||||||| |||||||||| ||||||| |||||||     ||||| |||||||    
T  43737332 ctacttgatcggattgctccgaaattttcccagaaaatcagaaaaaattcaaggaccatgactcccttagaaggaacttctt-gtgggactccgcccctc 43737430  T
Q  289 aaaataaaaaattacatcatttagaccca 317  Q
    |||||  |||||| |||| ||||||||||    
T  43737431 aaaatctaaaattccatcgtttagaccca 43737459  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #8
Raw Score: 116; E-Value: 7e-59
Query Start/End: Original strand, 82 - 317
Target Start/End: Original strand, 9151940 - 9152168
Alignment:
Q  82 ttgtaacatggatagtcattttagagaacaatattaatcttcctaactctcatcattctgttttgagtcattgttacctgttcttagtcaaaaatcaggt 181  Q
    |||||||||||||||||||||||| || |||||||||||||||||||||||||| |||||||||| ||||||||||| |||||||||| ||||||| |||    
T  9151940 ttgtaacatggatagtcattttaggga-caatattaatcttcctaactctcatccttctgttttgggtcattgttacatgttcttagtaaaaaatcgggt 9152038  T
Q  182 tttcgggctacttgatcggattgctccgaaacatacccagaaaatcagaaaaaattcaaggatcatgactcccgtagaagggacttcttacattgactct 281  Q
    ||| || ||||||||||||||||||||||||| | | ||||||     |||||| ||||||| |||||||||| |||||||||||||||||   |||||     
T  9152039 ttttggactacttgatcggattgctccgaaacttccacagaaa-----aaaaaaatcaaggaccatgactcccctagaagggacttcttac-gggactcc 9152132  T
Q  282 gcccctcaaaataaaaaattacatcatttagaccca 317  Q
    ||||||||||||  |||||| |||| ||||||||||    
T  9152133 gcccctcaaaatccaaaattccatcgtttagaccca 9152168  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #9
Raw Score: 105; E-Value: 3e-52
Query Start/End: Original strand, 85 - 317
Target Start/End: Complemental strand, 31985529 - 31985299
Alignment:
Q  85 taacatggatagtcattttagagaacaatattaatcttcctaactctcatcattctgttttgagtcattgttacctgttcttagtcaaaaatcaggtttt 184  Q
    ||||||| ||||||||||||  || ||||||||||||| ||||||||||||||||||||||| |||||||||| | ||||||||||||||||| ||||||    
T  31985529 taacatgaatagtcattttatgga-caatattaatctttctaactctcatcattctgttttgggtcattgttaaccgttcttagtcaaaaatctggtttt 31985431  T
Q  185 cgggctacttgatcggattgctccgaaacatacccagaaaatcagaaaaaattcaaggatcatgactcccgtagaagggacttcttacattgactctgcc 284  Q
     ||||||||||||| ||||| ||| |||| | |  | |||||||||||||| |||||||||||||||| | ||||||||| ||||||||  |||||||||    
T  31985430 tgggctacttgatcagattgttccaaaactttcttacaaaatcagaaaaaactcaaggatcatgactctcatagaagggatttcttaca-ggactctgcc 31985332  T
Q  285 cctcaaaataaaaaattacatcatttagaccca 317  Q
    ||||||| |  ||||||  ||| ||||||||||    
T  31985331 cctcaaactccaaaattcaatcgtttagaccca 31985299  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #10
Raw Score: 104; E-Value: 1e-51
Query Start/End: Original strand, 109 - 272
Target Start/End: Original strand, 33151373 - 33151535
Alignment:
Q  109 acaatattaatcttcctaactctcatcattctgttttgagtcattgttacctgttcttagtcaaaaatcaggttttcgggctacttgatcggattgctcc 208  Q
    ||||||||||||||||||||||||||| |||| ||||| |||||||||| ||||||||||||||||||  ||||||| | |||||||||||||||  |||    
T  33151373 acaatattaatcttcctaactctcatccttctattttgggtcattgttatctgttcttagtcaaaaattgggttttctgactacttgatcggattattcc 33151472  T
Q  209 gaaacatacccagaaaatcagaaaaaattcaaggatcatgactcccgtagaagggacttcttac 272  Q
    ||||| | ||||||||||||||||||||||||||| |||||||||| |||||||||||||||||    
T  33151473 gaaac-ttcccagaaaatcagaaaaaattcaaggaccatgactcccttagaagggacttcttac 33151535  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #11
Raw Score: 100; E-Value: 3e-49
Query Start/End: Original strand, 82 - 317
Target Start/End: Original strand, 8155043 - 8155276
Alignment:
Q  82 ttgtaacatggatagtcattttagagaacaatattaatcttcctaactctcatcattctgttttgagtcattgttacctgttcttagtcaaaaatcaggt 181  Q
    |||||||||| |||| |||||||| || |||||| |||||||||| |||| ||| || ||||||  |||||| ||||||||||||||||||||||| |||    
T  8155043 ttgtaacatgtatagccattttaggga-caatatcaatcttcctagctcttatccttttgtttttggtcattattacctgttcttagtcaaaaatcgggt 8155141  T
Q  182 tttcgggctacttgatcggattgctccgaaacatacccagaaaatcagaaaaaattcaaggatcatgactcccgtagaagggacttcttacattgactct 281  Q
    |||||| ||||||||||| |||| || ||||| | || | |||||||||||||||||||||||||||||||||||| |||| |||||||||   |||||     
T  8155142 tttcggactacttgatcgaattgttctgaaacttcccaaaaaaatcagaaaaaattcaaggatcatgactcccgtacaaggaacttcttac-gggactcc 8155240  T
Q  282 gcccctcaaaataaaaaattacatcatttagaccca 317  Q
    ||||||||||||  |||||| |||  ||||||||||    
T  8155241 gcccctcaaaatccaaaattccattgtttagaccca 8155276  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #12
Raw Score: 99; E-Value: 1e-48
Query Start/End: Original strand, 82 - 273
Target Start/End: Complemental strand, 24690349 - 24690161
Alignment:
Q  82 ttgtaacatggatagtcattttagagaacaatattaatcttcctaactctcatcattctgttttgagtcattgttacctgttcttagtcaaaaatcaggt 181  Q
    ||||||||||||| |||||||||  || |||||||||||| ||||||||||||| || ||||||| |||||||||||| |||||||||||| |||| | |    
T  24690349 ttgtaacatggatcgtcattttatgga-caatattaatctacctaactctcatccttttgttttgggtcattgttacccgttcttagtcaataatcggat 24690251  T
Q  182 ttt-cgggctacttgatcggattgctccgaaacatacccagaaaatcagaaaaaattcaaggatcatgactcccgtagaagggacttcttaca 273  Q
    ||| ||||||||||||||||||||||||||||| |  ||| ||||||||||||||||||||||||||||||||| |   ||||||||||||||    
T  24690250 ttttcgggctacttgatcggattgctccgaaacttctccataaaatcagaaaaaattcaaggatcatgactccctt---agggacttcttaca 24690161  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #13
Raw Score: 97; E-Value: 2e-47
Query Start/End: Original strand, 109 - 317
Target Start/End: Original strand, 31643211 - 31643417
Alignment:
Q  109 acaatattaatcttcctaactctcatcattctgttttgagtcattgttacctgttcttagtcaaaaatcaggttttcgggctacttgatcggattgctcc 208  Q
    ||||||||||||||||||||||| ||| || ||||||| ||||||||||| |||||||||||||||||| ||||| ||| |||||||||||||||||||     
T  31643211 acaatattaatcttcctaactcttatccttttgttttgggtcattgttacatgttcttagtcaaaaatcgggttt-cggactacttgatcggattgctct 31643309  T
Q  209 gaaacatacccagaaaatcagaaaaaattcaaggatcatgactcccgtagaagggacttcttacattgactctgcccctcaaaataaaaaattacatcat 308  Q
    ||||| | | || |||||||||||||||||||||| |||||||||| ||||||| ||||||||    |||||  |||||||||||  |||||| ||| ||    
T  31643310 gaaacttccgcaaaaaatcagaaaaaattcaaggaccatgactcccttagaaggaacttctta-tgggactccacccctcaaaatccaaaattccattat 31643408  T
Q  309 ttagaccca 317  Q
    |||||||||    
T  31643409 ttagaccca 31643417  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #14
Raw Score: 94; E-Value: 1e-45
Query Start/End: Original strand, 82 - 243
Target Start/End: Original strand, 36408515 - 36408675
Alignment:
Q  82 ttgtaacatggatagtcattttagagaacaatattaatcttcctaactctcatcattctgttttgagtcattgttacctgttcttagtcaaaaatcaggt 181  Q
    |||||||||||||||| ||||||| || |||||||||||||| |||||||| |  |||||||||| ||||||||||| |||||||||||||||||  |||    
T  36408515 ttgtaacatggatagtaattttaggga-caatattaatcttcttaactctctttcttctgttttgggtcattgttacgtgttcttagtcaaaaatttggt 36408613  T
Q  182 tttcgggctacttgatcggattgctccgaaacatacccagaaaatcagaaaaaattcaagga 243  Q
    |||||| ||||||||||||||||||||||||| |  ||| ||||||||||||||||||||||    
T  36408614 tttcggactacttgatcggattgctccgaaacttctccaaaaaatcagaaaaaattcaagga 36408675  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #15
Raw Score: 94; E-Value: 1e-45
Query Start/End: Original strand, 148 - 317
Target Start/End: Complemental strand, 37518213 - 37518045
Alignment:
Q  148 gtcattgttacctgttcttagtcaaaaatcaggttttcgggctacttgatcggattgctccgaaacatacccagaaaatcagaaaaaattcaaggatcat 247  Q
    |||||||||||||||||||||| ||||||  |||||| || ||| ||||||||||||||||||||| | ||||||||||||||||||||||||||| |||    
T  37518213 gtcattgttacctgttcttagttaaaaattgggtttttggactatttgatcggattgctccgaaacttccccagaaaatcagaaaaaattcaaggaccat 37518114  T
Q  248 gactcccgtagaagggacttcttacattgactctgcccctcaaaataaaaaattacatcatttagaccca 317  Q
    ||||||| |||||| |||||||||||  ||||| ||||||||||||  |||||| |||| ||||||||||    
T  37518113 gactcccatagaagagacttcttaca-ggactccgcccctcaaaatccaaaattccatcgtttagaccca 37518045  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #16
Raw Score: 91; E-Value: 6e-44
Query Start/End: Original strand, 82 - 315
Target Start/End: Complemental strand, 3304773 - 3304535
Alignment:
Q  82 ttgtaacatggatagtcattttagagaacaatattaatcttcctaactctcatcattctgttttgagtcattgttacctgttcttagtcaaaaatcaggt 181  Q
    |||||||||| |||  |||||||| || |||||||||||||||||||||| |||||| ||||||| |||||||||||||||||||||||||||||| |||    
T  3304773 ttgtaacatgtataaccattttaggga-caatattaatcttcctaactcttatcattttgttttgggtcattgttacctgttcttagtcaaaaatcgggt 3304675  T
Q  182 tttcgggctacttgatcggattgctccgaaacatacccagaaaatc-------agaaaaaattcaaggatcatgactcccgtagaagggacttcttacat 274  Q
    | |||||||||||||||||||||||| ||||| | || | ||||||       | |||||| ||||||| |||||||||  |||||||||||||||||      
T  3304674 tctcgggctacttgatcggattgctctgaaacttcccaaaaaaatcaaaaaaaaaaaaaaaatcaaggaccatgactcctctagaagggacttcttac-g 3304576  T
Q  275 tgactctgcccctcaaaataaaaaattacatcatttagacc 315  Q
     ||||| ||||||||||||  |||||| |||  ||||||||    
T  3304575 ggactccgcccctcaaaatccaaaatttcattgtttagacc 3304535  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #17
Raw Score: 90; E-Value: 2e-43
Query Start/End: Original strand, 82 - 317
Target Start/End: Original strand, 47202638 - 47202864
Alignment:
Q  82 ttgtaacatggatagtcattttagagaacaatattaatcttcctaactctcatcattctgttttgagtcattgttacctgttcttagtcaaaaatcaggt 181  Q
    |||||||||| |||| | |||||| || |||||||||||||||||||||| ||| || ||||||| ||||| |||       |||||||||||||| |||    
T  47202638 ttgtaacatgtatagccgttttaggga-caatattaatcttcctaactcttatccttttgttttgggtcatcgtt-------cttagtcaaaaatcgggt 47202729  T
Q  182 tttcgggctacttgatcggattgctccgaaacatacccagaaaatcagaaaaaattcaaggatcatgactcccgtagaagggacttcttacattgactct 281  Q
    |||||||||||||||| |||||||||  |||| | |||| |||||||||||||||||||||| |||||||||| |||||||||||||||| |  |||||     
T  47202730 tttcgggctacttgattggattgctcttaaacttccccaaaaaatcagaaaaaattcaaggaccatgactcccatagaagggacttctta-agggactcc 47202828  T
Q  282 gcccctcaaaataaaaaattacatcatttagaccca 317  Q
    ||||||||||||  |||||| |||  ||||||||||    
T  47202829 gcccctcaaaatccaaaattccattgtttagaccca 47202864  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #18
Raw Score: 89; E-Value: 9e-43
Query Start/End: Original strand, 82 - 237
Target Start/End: Original strand, 3936252 - 3936407
Alignment:
Q  82 ttgtaacatggatagtcattttagagaacaatattaatcttcctaactctcatcattctgttttgagtcattgttacctgttcttagtcaaaaatcaggt 181  Q
    |||||||||||||| ||||||||| || |||||||||||||||||||||||||| |||| ||||| ||||||||||||| |||||||||||||||| | |    
T  3936252 ttgtaacatggataatcattttaggga-caatattaatcttcctaactctcatccttctattttgggtcattgttacctattcttagtcaaaaatcggat 3936350  T
Q  182 tttcgggctacttgatcggattgctccgaaacatacccag-aaaatcagaaaaaatt 237  Q
    |||||| || |||||||||||||||||||||| | ||||| |||||| |||||||||    
T  3936351 tttcggactgcttgatcggattgctccgaaacttccccagaaaaatccgaaaaaatt 3936407  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #19
Raw Score: 85; E-Value: 2e-40
Query Start/End: Original strand, 109 - 272
Target Start/End: Complemental strand, 7115259 - 7115095
Alignment:
Q  109 acaatattaatcttcctaactctcatcattctgttttgagtcattgttacctgttcttagtcaaaaatcaggttttcgggctacttgatcggattgctcc 208  Q
    ||||||||||||||  ||||||||||| |||| ||||  ||||||||||  ||||||||||||||||||  |||||||||||||||||||| |||||||     
T  7115259 acaatattaatcttgataactctcatccttctatttttggtcattgttagttgttcttagtcaaaaatcgtgttttcgggctacttgatcgtattgctct 7115160  T
Q  209 gaaacatacccagaaaatcagaa-aaaattcaaggatcatgactcccgtagaagggacttcttac 272  Q
    ||||| | | ||||||||||||| |||| |||||||||| ||||||| |||||||||||||||||    
T  7115159 gaaacttcctcagaaaatcagaaaaaaaatcaaggatcaagactcccttagaagggacttcttac 7115095  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #20
Raw Score: 82; E-Value: 1e-38
Query Start/End: Original strand, 76 - 313
Target Start/End: Complemental strand, 36946312 - 36946078
Alignment:
Q  76 atatgcttgtaacatggatagtcattttagagaacaatattaatcttcctaactctcatcattctgttttgagtcattgttacctgttcttagtcaaaaa 175  Q
    ||||| |||||||||| ||| |||||||| ||| ||||||||| |||||||||||||||| || ||||||| ||||||||||  |||| ||||||||||     
T  36946312 atatgtttgtaacatgaataatcatttta-aga-caatattaagcttcctaactctcatccttttgttttgggtcattgttagttgttattagtcaaaat 36946215  T
Q  176 tcaggttttcgggctacttgatcggattgctccgaaacatacccagaaaatcagaaaaaattcaaggatcatgactcccgtagaagggacttcttacatt 275  Q
    || |||||||||| |||||||||| |||||| |||||| | ||||||||| ||| ||||| ||||||||||  |||||| ||||||  |||||| || |     
T  36946214 tctggttttcgggatacttgatcgaattgcttcgaaacttccccagaaaaccaggaaaaaatcaaggatcaaaactcccatagaagcaacttctaac-tg 36946116  T
Q  276 gactctgcccctcaaaataaaaaattacatcatttaga 313  Q
    ||||| || ||| |||||  |||||| |||||||||||    
T  36946115 gactccgcaccttaaaatccaaaattccatcatttaga 36946078  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #21
Raw Score: 77; E-Value: 1e-35
Query Start/End: Original strand, 82 - 313
Target Start/End: Original strand, 1518851 - 1519087
Alignment:
Q  82 ttgtaacatggatagtcattttagagaacaatattaatcttcctaactctcatcattctgttttgagtcattgttacctgttcttagtcaaaaatcaggt 181  Q
    ||||||||| |||| ||||||||  || |||||||||||||| ||||||||||| |||| ||||| || ||||||| ||||||||||| ||||||  |||    
T  1518851 ttgtaacatcgataatcattttatgga-caatattaatcttcttaactctcatccttctattttgggttattgttagctgttcttagtaaaaaatagggt 1518949  T
Q  182 tttcgggctacttgatcggattgctccgaaacatacccagaaaatcag-------aaaaaattcaaggatcatgactcccgtagaagggacttcttacat 274  Q
    |||||| ||||||||||||||||||||||||| | || |||||| |||       |||||| |||||||||| || |||||||||||||||||| ||       
T  1518950 tttcggactacttgatcggattgctccgaaactttcctagaaaaacagaaagaaaaaaaaaatcaaggatcaagattcccgtagaagggacttccta-tg 1519048  T
Q  275 tgactctgcccctcaaaataaaaaattacatcatttaga 313  Q
    |||||| || |||||||||  |||||| |||| ||||||    
T  1519049 tgactccgctcctcaaaatctaaaattccatcgtttaga 1519087  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #22
Raw Score: 77; E-Value: 1e-35
Query Start/End: Original strand, 127 - 243
Target Start/End: Complemental strand, 26555128 - 26555012
Alignment:
Q  127 actctcatcattctgttttgagtcattgttacctgttcttagtcaaaaatcaggttttcgggctacttgatcggattgctccgaaacatacccagaaaat 226  Q
    ||||||||| |||| ||||| ||||||||||| |||||||||| ||||| | ||||||||||||||||||||||||||||| ||||| | ||||||||||    
T  26555128 actctcatccttctattttgggtcattgttacatgttcttagtaaaaaaacgggttttcgggctacttgatcggattgctctgaaactttcccagaaaat 26555029  T
Q  227 cagaaaaaattcaagga 243  Q
    |||||||||||||||||    
T  26555028 cagaaaaaattcaagga 26555012  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #23
Raw Score: 77; E-Value: 1e-35
Query Start/End: Original strand, 109 - 317
Target Start/End: Complemental strand, 33574032 - 33573830
Alignment:
Q  109 acaatattaatcttcctaactctcatcattctgttttgagtcattgttacctgttcttagtcaaaaatcaggttttcgggctacttgatcggattgctcc 208  Q
    |||||||||||||| |||||||| ||| || ||||||||||||||||||| |||| ||| ||||||||  ||||||||  |||||||||||||||||||     
T  33574032 acaatattaatctttctaactcttatccttttgttttgagtcattgttacatgtttttaatcaaaaattgggttttcgaactacttgatcggattgctct 33573933  T
Q  209 gaaacatacccagaaaatcagaaaaaattcaaggatcatgactcccgtagaagggacttcttacattgactctgcccctcaaaataaaaaattacatcat 308  Q
    ||||| | |||| |||||||||||||||||||     ||||||||   ||||||||||||||||   ||||| ||||||||||||  |||||| |||  |    
T  33573932 gaaacttccccaaaaaatcagaaaaaattcaa-----atgactcctaaagaagggacttcttac-gggactccgcccctcaaaatccaaaatttcattgt 33573839  T
Q  309 ttagaccca 317  Q
    |||||||||    
T  33573838 ttagaccca 33573830  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #24
Raw Score: 71; E-Value: 5e-32
Query Start/End: Original strand, 112 - 271
Target Start/End: Complemental strand, 37398877 - 37398714
Alignment:
Q  112 atattaatcttcctaactctcatcattctgttttgagtcattgttacctgttcttagtcaaaaatcaggttttcgggctacttgatcggattgctccgaa 211  Q
    ||||||||||||||||||||||||||||||||||  ||||||||||  |||||||||| ||||||  ||||||  |||||||||||| ||||||||||||    
T  37398877 atattaatcttcctaactctcatcattctgttttaggtcattgttagttgttcttagtaaaaaattcggtttttaggctacttgatcagattgctccgaa 37398778  T
Q  212 acatacccagaaaatcag----aaaaaattcaaggatcatgactcccgtagaagggacttctta 271  Q
    || | || ||||||||||    |||||| |||||||||| | || || ||||| ||||||||||    
T  37398777 acttccctagaaaatcaggaaaaaaaaaatcaaggatcaagtcttccttagaatggacttctta 37398714  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #25
Raw Score: 66; E-Value: 5e-29
Query Start/End: Original strand, 82 - 187
Target Start/End: Complemental strand, 28230483 - 28230379
Alignment:
Q  82 ttgtaacatggatagtcattttagagaacaatattaatcttcctaactctcatcattctgttttgagtcattgttacctgttcttagtcaaaaatcaggt 181  Q
    |||||||||||||||||||||||  || |||||||||||||||||||||||||| |||||||||| ||||||||| | ||||||||||||||| || |||    
T  28230483 ttgtaacatggatagtcattttatgga-caatattaatcttcctaactctcatccttctgttttgggtcattgttgcatgttcttagtcaaaattcgggt 28230385  T
Q  182 tttcgg 187  Q
    ||||||    
T  28230384 tttcgg 28230379  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #26
Raw Score: 64; E-Value: 8e-28
Query Start/End: Original strand, 82 - 317
Target Start/End: Complemental strand, 24042203 - 24041979
Alignment:
Q  82 ttgtaacatggatagtcattttagagaacaatattaatcttcctaactctcatcattctg-ttttgagtcattgttacctgttcttagtcaaaaatcagg 180  Q
    ||||||||| |||||||||||||| || |||||| ||||||||||||||||||| ||| | ||||| |||||| |||          | |||||||| ||    
T  24042203 ttgtaacattgatagtcattttaggga-caatatcaatcttcctaactctcatccttccgtttttgggtcatt-tta--------gggacaaaaatcggg 24042114  T
Q  181 ttttcgggctacttgatcggattgctccgaaacatacccagaaaatcagaaaaaattcaaggatcatgactcccgtagaagggacttcttacattgactc 280  Q
    ||||| ||||| ||||||||| ||||||||||| | ||||||||||||||||||||||||||| ||||||||| ||||  ||||||||||||   |||||    
T  24042113 ttttcaggctatttgatcggactgctccgaaacttccccagaaaatcagaaaaaattcaaggaccatgactcctgtag-tgggacttcttac-gggactc 24042016  T
Q  281 tgcccctcaaaataaaaaattacatcatttagaccca 317  Q
     ||||||||||||  |||| | |||| ||||||||||    
T  24042015 cgcccctcaaaatccaaaactccatcgtttagaccca 24041979  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #27
Raw Score: 59; E-Value: 7e-25
Query Start/End: Original strand, 82 - 317
Target Start/End: Complemental strand, 6467155 - 6466919
Alignment:
Q  82 ttgtaacatggatagtcattttagagaacaatattaatcttcctaactctcatcattctgttttgagtcattgttacctgttcttagtcaaaaatcaggt 181  Q
    |||||| ||||||||| |||||| ||  |||||||||| |||||||||||| || |||| ||||  |||||||||| ||||||||||| ||||||  |||    
T  6467155 ttgtaatatggatagttatttta-agggcaatattaattttcctaactctcttccttctattttaggtcattgttagctgttcttagttaaaaatttggt 6467057  T
Q  182 tttcgggctacttgatcggattgctccgaaacatacccagaaaatcag----aaaaaattcaaggatcatgactcccgtagaagggacttcttacattga 277  Q
     ||| |||||||||||||||||| || ||||  | || ||||||||||    |||||| |||||||||| ||||||  ||||| | ||||||||    ||    
T  6467056 attccggctacttgatcggattgttctgaaatttccctagaaaatcaggaataaaaaaatcaaggatcaagactcctatagaa-gtacttctta-tggga 6466959  T
Q  278 ctctgcccctcaaaataaaaaattacatcatttagaccca 317  Q
    ||| ||||||||||||  |||||| |||| ||||||||||    
T  6466958 ctccgcccctcaaaatctaaaatttcatcgtttagaccca 6466919  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #28
Raw Score: 55; E-Value: 2e-22
Query Start/End: Original strand, 82 - 176
Target Start/End: Original strand, 5278408 - 5278501
Alignment:
Q  82 ttgtaacatggatagtcattttagagaacaatattaatcttcctaactctcatcattctgttttgagtcattgttacctgttcttagtcaaaaat 176  Q
    ||||||||||||||||||||||| || | ||||||||||||||||||||| ||| |||||||||| |||||||||| | ||||||||||| ||||    
T  5278408 ttgtaacatggatagtcatttta-aggataatattaatcttcctaactcttatccttctgttttgggtcattgttagccgttcttagtcacaaat 5278501  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #29
Raw Score: 54; E-Value: 7e-22
Query Start/End: Original strand, 112 - 317
Target Start/End: Complemental strand, 48705985 - 48705781
Alignment:
Q  112 atattaatcttcctaactctcatcattctgttttgagtcattgttacctgttcttagtcaaaaatcaggttttcgggctacttgatcggattgctccgaa 211  Q
    |||||||||||||||||||  ||| || ||||||  |||||||||   |||||| ||| ||||||    ||||||||||||||||||  |||| ||||||    
T  48705985 atattaatcttcctaactcggatctttatgttttaggtcattgtttattgttctcagtaaaaaattcaattttcgggctacttgatcatattgttccgaa 48705886  T
Q  212 acatacccagaaaatcagaaaaaattcaaggatcatgactcccgtagaagggacttcttacattgactctgcccctcaaaataaaaaattacatcattta 311  Q
    || | |||| ||||||  |||||||||||| |||  |  ||||||||||||||||||||| |  ||||| |||||||||| |  |||||| |||| ||||    
T  48705885 actttcccaaaaaatcttaaaaaattcaagaatccaggatcccgtagaagggacttcttata-ggactccgcccctcaaattccaaaatttcatcgttta 48705787  T
Q  312 gaccca 317  Q
    ||||||    
T  48705786 gaccca 48705781  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #30
Raw Score: 45; E-Value: 2e-16
Query Start/End: Original strand, 82 - 158
Target Start/End: Complemental strand, 37518310 - 37518235
Alignment:
Q  82 ttgtaacatggatagtcattttagagaacaatattaatcttcctaactctcatcattctgttttgagtcattgttac 158  Q
    ||||||||  |||||||||||||| ||||| ||||||||||||||||||||||| |||||||||  |||||||||||    
T  37518310 ttgtaacagagatagtcattttag-gaacactattaatcttcctaactctcatccttctgttttaggtcattgttac 37518235  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #31
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 113 - 198
Target Start/End: Original strand, 39581913 - 39581998
Alignment:
Q  113 tattaatcttcctaactctcatcattctgttttgagtcattgttacctgttcttagtcaaaaatcaggttttcgggctacttgatc 198  Q
    ||||||||||| ||||||||||  |||||||||  ||||||||||  | ||||| |||||||||| |||||| |||||||||||||    
T  39581913 tattaatcttcataactctcattcttctgttttaggtcattgttagttattcttcgtcaaaaatccggtttttgggctacttgatc 39581998  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #32
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 86 - 145
Target Start/End: Complemental strand, 8214301 - 8214243
Alignment:
Q  86 aacatggatagtcattttagagaacaatattaatcttcctaactctcatcattctgtttt 145  Q
    |||||||||||||||| || || |||||||||||||||||||||||||||||| ||||||    
T  8214301 aacatggatagtcattcta-aggacaatattaatcttcctaactctcatcattgtgtttt 8214243  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #33
Raw Score: 39; E-Value: 0.0000000000006
Query Start/End: Original strand, 85 - 213
Target Start/End: Complemental strand, 48776223 - 48776094
Alignment:
Q  85 taacatggatagtcattttagagaacaatattaatcttcctaactctcat-cattctgttttgag-tcattgttacctgttcttagtcaaaaatcaggtt 182  Q
    ||||||||||||| |||||| || | |||||||||||||||||||||||| |||  |  ||| || |||||| ||  |||||||||||||||||  | ||    
T  48776223 taacatggatagtgatttta-aggataatattaatcttcctaactctcatgcatagtcattttaggtcattgctagttgttcttagtcaaaaatttgatt 48776125  T
Q  183 ttcgggctacttgatcggattgctccgaaac 213  Q
    |||| ||||||| ||| ||||||||||||||    
T  48776124 ttcgagctacttaatcagattgctccgaaac 48776094  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #34
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 82 - 167
Target Start/End: Complemental strand, 16983757 - 16983673
Alignment:
Q  82 ttgtaacatggatagtcattttagagaacaatattaatcttcctaactctcatcattctgttttgagtcattgttacctgttctta 167  Q
    ||||||||||||||  || |||| ||| |||||||||||||||||||||||||| |||| ||||  |||||| ||| |||||||||    
T  16983757 ttgtaacatggataaccagtttacaga-caatattaatcttcctaactctcatccttctatttttggtcattattagctgttctta 16983673  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #35
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 188 - 272
Target Start/End: Original strand, 43186030 - 43186118
Alignment:
Q  188 gctacttgatcggattgctccgaaacatacccagaaaatcagaa----aaaattcaaggatcatgactcccgtagaagggacttcttac 272  Q
    ||||||||||| |||||||| ||||  | | |||||||||||||    |||| |||||||||| ||||||| |||||||||||||||||    
T  43186030 gctacttgatccgattgctctgaaattttcacagaaaatcagaagaagaaaaatcaaggatcaagactcccttagaagggacttcttac 43186118  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #36
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 82 - 135
Target Start/End: Complemental strand, 8214516 - 8214464
Alignment:
Q  82 ttgtaacatggatagtcattttagagaacaatattaatcttcctaactctcatc 135  Q
    ||||||||| ||| ||||||||| || |||||||||||||||||||||||||||    
T  8214516 ttgtaacatcgattgtcatttta-aggacaatattaatcttcctaactctcatc 8214464  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #37
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 78 - 134
Target Start/End: Original strand, 48775748 - 48775803
Alignment:
Q  78 atgcttgtaacatggatagtcattttagagaacaatattaatcttcctaactctcat 134  Q
    |||||||||||||| ||||||| |||| || ||||||||||||||||||||| ||||    
T  48775748 atgcttgtaacatgaatagtcagttta-aggacaatattaatcttcctaactatcat 48775803  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #38
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 222 - 272
Target Start/End: Original strand, 18322248 - 18322298
Alignment:
Q  222 aaaatcagaaaaaattcaaggatcatgactcccgtagaagggacttcttac 272  Q
    |||||||| ||||| |||| ||||| |||||||||||||| ||||||||||    
T  18322248 aaaatcaggaaaaaatcaaagatcaagactcccgtagaagtgacttcttac 18322298  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #39
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 165 - 231
Target Start/End: Complemental strand, 47239622 - 47239556
Alignment:
Q  165 ttagtcaaaaatcaggttttcgggctacttgatcggattgctccgaaacatacccagaaaatcagaa 231  Q
    ||||||||||||| | |||||||  ||||||||| |||||||||||||| | | |||||||| ||||    
T  47239622 ttagtcaaaaatctgattttcggagtacttgatcagattgctccgaaacttccacagaaaattagaa 47239556  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #40
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 76 - 145
Target Start/End: Original strand, 16278244 - 16278312
Alignment:
Q  76 atatgcttgtaacatggatagtcattttagagaacaatattaatcttcctaactctcatcattctgtttt 145  Q
    ||||| ||||||||||||||||||||||| || |||||||||||| || | |||| |||| || ||||||    
T  16278244 atatgtttgtaacatggatagtcatttta-aggacaatattaatcatctttactcccatccttgtgtttt 16278312  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6 (Bit Score: 128; Significance: 5e-66; HSPs: 28)
Name: chr6
Description:

Target: chr6; HSP #1
Raw Score: 128; E-Value: 5e-66
Query Start/End: Original strand, 82 - 317
Target Start/End: Complemental strand, 4508317 - 4508084
Alignment:
Q  82 ttgtaacatggatagtcattttagagaacaatattaatcttcctaactctcatcattctgttttgagtcattgttacctgttcttagtcaaaaatcaggt 181  Q
    |||||| ||||||||||||||||| || |||||||||||||||||||| ||||| |||||||||| ||||||||||| |||||||||||||||||| |||    
T  4508317 ttgtaatatggatagtcattttaggga-caatattaatcttcctaactttcatccttctgttttgggtcattgttacatgttcttagtcaaaaatcgggt 4508219  T
Q  182 tttcgggctacttgatcggattgctccgaaacatacccagaaaatcagaaaaaattcaaggatcatgactcccgtagaagggacttcttacattgactct 281  Q
    |||||||||||||||| ||||||||||||||| | | |||||||||||||| |||||||||| ||||||||||  ||||| ||||||||| |  |||||     
T  4508218 tttcgggctacttgattggattgctccgaaacttccgcagaaaatcagaaacaattcaaggaccatgactcccacagaagagacttctta-agggactcc 4508120  T
Q  282 gcccctcaaaataaaaaattacatcatttagaccca 317  Q
    ||||||||||||  |||||| |||| ||||||||||    
T  4508119 gcccctcaaaatccaaaattccatcgtttagaccca 4508084  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #2
Raw Score: 127; E-Value: 2e-65
Query Start/End: Original strand, 76 - 317
Target Start/End: Complemental strand, 21515052 - 21514813
Alignment:
Q  76 atatgcttgtaacatggatagtcattttagagaacaatattaatcttcctaactctcatcattctgttttgagtcattgttacctgttcttagtcaaaaa 175  Q
    ||||| |||||||||||||||||||||||| || |||||||||||||||||||||||||| ||||  |||| ||||||||||||||||||||||||||||    
T  21515052 atatgtttgtaacatggatagtcattttaggga-caatattaatcttcctaactctcatccttctcctttgggtcattgttacctgttcttagtcaaaaa 21514954  T
Q  176 tcaggttttcgggctacttgatcggattgctccgaaacatacccagaaaatcag-aaaaaattcaaggatcatgactcccgtagaagggacttcttacat 274  Q
    || | ||||||| ||||||||||||||||||||||||| | |||| ||||| || |||||||||||||||||| |||||| |||||||||||||||||      
T  21514953 tcggattttcggactacttgatcggattgctccgaaacttccccataaaattagaaaaaaattcaaggatcat-actcccttagaagggacttcttac-g 21514856  T
Q  275 tgactctgcccctcaaaataaaaaattacatcatttagaccca 317  Q
     ||||| ||||||||||||  |||||| |||| ||||||||||    
T  21514855 ggactccgcccctcaaaatccaaaattccatcgtttagaccca 21514813  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #3
Raw Score: 121; E-Value: 7e-62
Query Start/End: Original strand, 82 - 314
Target Start/End: Original strand, 2539595 - 2539825
Alignment:
Q  82 ttgtaacatggatagtcattttagagaacaatattaatcttcctaactctcatcattctgttttgagtcattgttacctgttcttagtcaaaaatcaggt 181  Q
    |||||||||||||||||||||||| || |||||||||||||||||||||||||| |||||||||| ||||||||||||| ||| |||| ||||| |  ||    
T  2539595 ttgtaacatggatagtcattttaggga-caatattaatcttcctaactctcatccttctgttttgggtcattgttacctattcgtagttaaaaaccgagt 2539693  T
Q  182 tttcgggctacttgatcggattgctccgaaacatacccagaaaatcagaaaaaattcaaggatcatgactcccgtagaagggacttcttacattgactct 281  Q
    |||||| ||||||||||||||||||||||||| | ||||||||||||||||||||||||||| |||||||| | |||||| ||||||||||   |||||     
T  2539694 tttcggactacttgatcggattgctccgaaacttgcccagaaaatcagaaaaaattcaaggaccatgactctcatagaagtgacttcttac-gggactcc 2539792  T
Q  282 gcccctcaaaataaaaaattacatcatttagac 314  Q
    ||||||||||||  ||||||  ||| |||||||    
T  2539793 gcccctcaaaatccaaaattcaatcgtttagac 2539825  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #4
Raw Score: 121; E-Value: 7e-62
Query Start/End: Original strand, 82 - 270
Target Start/End: Complemental strand, 24604376 - 24604189
Alignment:
Q  82 ttgtaacatggatagtcattttagagaacaatattaatcttcctaactctcatcattctgttttgagtcattgttacctgttcttagtcaaaaatcaggt 181  Q
    ||||||||  ||||||||||||||||| |||||||||||||||||||| ||||| ||||||||||||||||||||||||||||||||||||||||| |||    
T  24604376 ttgtaacaaagatagtcattttagaga-caatattaatcttcctaactttcatccttctgttttgagtcattgttacctgttcttagtcaaaaatcgggt 24604278  T
Q  182 tttcgggctacttgatcggattgctccgaaacatacccagaaaatcagaaaaaattcaaggatcatgactcccgtagaagggacttctt 270  Q
    ||| |||||||||||||  |||||| | |||||| || ||||||| | ||||||||||||||||||||||||| |||||||||||||||    
T  24604277 ttttgggctacttgatcacattgcttctaaacatccctagaaaataaaaaaaaattcaaggatcatgactcccttagaagggacttctt 24604189  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #5
Raw Score: 116; E-Value: 7e-59
Query Start/End: Original strand, 83 - 293
Target Start/End: Complemental strand, 3717297 - 3717088
Alignment:
Q  83 tgtaacatggatagtcattttagagaacaatattaatcttcctaactctcatcattctgtttt-gagtcattgttacctgttcttagtcaaaaatcaggt 181  Q
    ||||||||||||||||||||||| || |||||||||| || |||||||||||| ||||||||| | ||||||||||| |||||||||||||||||| |||    
T  3717297 tgtaacatggatagtcattttaggga-caatattaatttttctaactctcatccttctgtttttgggtcattgttacatgttcttagtcaaaaatcgggt 3717199  T
Q  182 tttcgggctacttgatcggattgctccgaaacatacccagaaaatcagaaaaaattcaaggatcatgactcccgtagaagggacttcttacattgactct 281  Q
    |||| | ||||||||||||||||||||||||||| |||| |||||||||||||||||||||| |||| ||||| |||||| ||||||||||   |||||     
T  3717198 tttcagactacttgatcggattgctccgaaacatccccaaaaaatcagaaaaaattcaaggaccatggctcccctagaagagacttcttac-gggactcc 3717100  T
Q  282 gcccctcaaaat 293  Q
    ||||||||||||    
T  3717099 gcccctcaaaat 3717088  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #6
Raw Score: 113; E-Value: 4e-57
Query Start/End: Original strand, 85 - 317
Target Start/End: Complemental strand, 2813237 - 2813004
Alignment:
Q  85 taacatggatagtcattttagagaacaatattaatcttcctaactctcatcattctgtttt-gagtcattgttacctgttcttagtcaaaaatcaggttt 183  Q
    ||||||| ||||||||||||  ||  ||||||||||||||||||||||||| ||| ||||| | |||||||||||||||||||||||||||||| |||||    
T  2813237 taacatgaatagtcattttatggat-aatattaatcttcctaactctcatccttccgtttttgggtcattgttacctgttcttagtcaaaaatcgggttt 2813139  T
Q  184 tcgggctacttgatcggattgctccgaaacatacccagaaaatcagaa--aaaattcaaggatcatgactcccgtagaagggacttcttacattgactct 281  Q
    |||||||||||||||||||||||||||||| | |||||||||||||||  |||||||||||| |||||||||| ||||| ||||||||||    |||||     
T  2813138 tcgggctacttgatcggattgctccgaaacttccccagaaaatcagaaaaaaaattcaaggaccatgactcccttagaatggacttctta-tgggactcc 2813040  T
Q  282 gcccctcaaaataaaaaattacatcatttagaccca 317  Q
     |||||||||||  |||||| |||| ||||||||||    
T  2813039 acccctcaaaatccaaaatttcatcgtttagaccca 2813004  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #7
Raw Score: 111; E-Value: 7e-56
Query Start/End: Original strand, 86 - 272
Target Start/End: Original strand, 17264558 - 17264742
Alignment:
Q  86 aacatggatagtcattttagagaacaatattaatcttcctaactctcatcattctgttttgagtcattgttacctgttcttagtcaaaaatcaggttttc 185  Q
    ||||||| |||||||||||| || ||||||| |||||||||||||||||| |||||||||| |||||||||||||||||||||| ||||||   |||||     
T  17264558 aacatggttagtcattttaggga-caatatttatcttcctaactctcatccttctgttttgcgtcattgttacctgttcttagttaaaaattgagttttt 17264656  T
Q  186 gggctacttgatcggattgctccgaaacatacccagaaaatcagaaaaaattcaaggatcatgactcccgtagaagggacttcttac 272  Q
    |||||||||||| ||||||||||||||| | ||||||||||||| ||||||||||||| |||||||||| |||||||||||||||||    
T  17264657 gggctacttgatgggattgctccgaaacttccccagaaaatcag-aaaaattcaaggaccatgactcccctagaagggacttcttac 17264742  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #8
Raw Score: 100; E-Value: 3e-49
Query Start/End: Original strand, 76 - 234
Target Start/End: Original strand, 5699703 - 5699861
Alignment:
Q  76 atatgcttgtaacatggatagtcattttagagaacaatattaatcttcctaactctcatcattctgtttt-gagtcattgttacctgttcttagtcaaaa 174  Q
    ||||| ||||||||||||||||||||||| || ||||||||||||||| ||||||||||| ||||||||| | ||||||||||||| |||||||||||||    
T  5699703 atatgtttgtaacatggatagtcatttta-aggacaatattaatcttcataactctcatccttctgtttttgggtcattgttacctattcttagtcaaaa 5699801  T
Q  175 atcaggttttcgggctacttgatcggattgctccgaaacatacccagaaaatcagaaaaa 234  Q
    ||| || |||||| ||||||||||||||||||||||||| | ||||||||||||||||||    
T  5699802 atcgggatttcggactacttgatcggattgctccgaaacttccccagaaaatcagaaaaa 5699861  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #9
Raw Score: 96; E-Value: 6e-47
Query Start/End: Original strand, 82 - 213
Target Start/End: Original strand, 9905258 - 9905389
Alignment:
Q  82 ttgtaacatggatagtcattttagagaacaatattaatcttcctaactctcatcattctgttttgagtcattgttacctgttcttagtcaaaaatcaggt 181  Q
    |||||||||||||| ||||||||| ||||||||||||| ||||| ||||| ||| |||||||||||||||||||||||  |||||||||||||||| |||    
T  9905258 ttgtaacatggataatcattttagggaacaatattaattttccttactcttatccttctgttttgagtcattgttaccaattcttagtcaaaaatcgggt 9905357  T
Q  182 tttcgggctacttgatcggattgctccgaaac 213  Q
    ||||||||||||||||||||||||||||||||    
T  9905358 tttcgggctacttgatcggattgctccgaaac 9905389  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #10
Raw Score: 92; E-Value: 1e-44
Query Start/End: Original strand, 82 - 232
Target Start/End: Original strand, 23406940 - 23407090
Alignment:
Q  82 ttgtaacatggatagtcattttagagaacaatattaatcttcctaactctcatcattctgtttt-gagtcattgttacctgttcttagtcaaaaatcagg 180  Q
    |||||||||||||||||||||||| || |||||||||||||||||||||||||| ||| ||||| | |||||| |||| ||||||||||||||||||| |    
T  23406940 ttgtaacatggatagtcattttaggga-caatattaatcttcctaactctcatccttccgtttttgggtcattattacttgttcttagtcaaaaatcaag 23407038  T
Q  181 ttttcgggctacttgatcggattgctccgaaacatacccagaaaatcagaaa 232  Q
    |||||||||||||||||  |||||||||||||| | ||||||||||||||||    
T  23407039 ttttcgggctacttgatttgattgctccgaaacttccccagaaaatcagaaa 23407090  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #11
Raw Score: 91; E-Value: 6e-44
Query Start/End: Original strand, 109 - 311
Target Start/End: Original strand, 5639032 - 5639232
Alignment:
Q  109 acaatattaatcttcctaactctcatcattctgttttgagtcattgttacctgttcttagtcaaaaatcaggttttcgggctacttgatcggattgctcc 208  Q
    ||||||||||||||| ||||||| ||| || |||||||||||||||||||||||||||| ||||||||| ||||| ||||||||||| || ||||||||     
T  5639032 acaatattaatcttcttaactcttatccttttgttttgagtcattgttacctgttcttaatcaaaaatcgggtttccgggctacttggtcagattgctct 5639131  T
Q  209 gaaacatacccagaaaatcagaaaaaattcaaggatcatgactcccgtagaagggacttcttacattgactctgcccctcaaaataaaaaattacatcat 308  Q
    ||||| | |||| |||||||| ||||||||||||| |||||||||  |||||| ||||||||||   ||||| ||||||||||||  |||||| |||| |    
T  5639132 gaaactttcccaaaaaatcag-aaaaattcaaggaccatgactcctttagaagagacttcttac-gggactccgcccctcaaaatccaaaattccatcgt 5639229  T
Q  309 tta 311  Q
    |||    
T  5639230 tta 5639232  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #12
Raw Score: 91; E-Value: 6e-44
Query Start/End: Original strand, 82 - 272
Target Start/End: Complemental strand, 14587575 - 14587387
Alignment:
Q  82 ttgtaacatggatagtcattttagagaacaatattaatcttcctaactctcatcattctgttttgagtcattgttacctgttcttagtcaaaaatcaggt 181  Q
    |||||||||||||||||||||||  || |||||||||||||||||||||| ||| || ||||||| ||||||||||| |||||||||| |||||   | |    
T  14587575 ttgtaacatggatagtcattttacgga-caatattaatcttcctaactctaatccttatgttttgggtcattgttacatgttcttagtaaaaaaatggat 14587477  T
Q  182 tttcgggctacttgatcggattgctccgaaacatacccagaaaatcagaaaaaattcaaggatcatgactcccgtagaagggacttcttac 272  Q
    ||| |||||||||||| |||||||| |||||| | |||||||||| |||||||||||||||| || ||||||| ||||||| |||||||||    
T  14587476 ttttgggctacttgattggattgcttcgaaac-ttcccagaaaattagaaaaaattcaaggaccaagactcccttagaaggaacttcttac 14587387  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #13
Raw Score: 83; E-Value: 4e-39
Query Start/End: Original strand, 82 - 268
Target Start/End: Original strand, 34528584 - 34528768
Alignment:
Q  82 ttgtaacatggatagtcattttagagaacaatattaatcttcctaactctcatcattctgttttgagtcattgttacctgttcttagtcaaaaatcaggt 181  Q
    |||||||||||||| |||||| | || | |||||||||||| |||||||||||  |||||||||| |||||| ||| ||||||||||||||||||| |||    
T  34528584 ttgtaacatggatattcatttca-aggataatattaatctttctaactctcattcttctgttttgggtcattattagctgttcttagtcaaaaatctggt 34528682  T
Q  182 tttcgggctacttgatcggattgctccgaaacatacccagaaaatcagaaaaaattcaaggatcatgactcccgtagaagggacttc 268  Q
    |||||| |||||||||||||||||||| |||| | | || |||||||| ||||| |||||||||| |||| | ||||||| ||||||    
T  34528683 tttcggtctacttgatcggattgctccaaaacttcctcataaaatcaggaaaaa-tcaaggatcaagacttctgtagaagagacttc 34528768  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #14
Raw Score: 82; E-Value: 1e-38
Query Start/End: Original strand, 82 - 243
Target Start/End: Original strand, 29519423 - 29519583
Alignment:
Q  82 ttgtaacatggatagtcattttagagaacaatattaatcttcctaactctcatcattctgttttgagtcattgttacctgttcttagtcaaaaatcaggt 181  Q
    |||||||||| || |||||||||  ||| ||||||||||||||||||| ||||| |||| ||||| ||||||||||| ||||||| |||||||||| |||    
T  29519423 ttgtaacatgaattgtcattttatggaa-aatattaatcttcctaactatcatccttctattttgggtcattgttacgtgttcttggtcaaaaatcgggt 29519521  T
Q  182 tttcgggctacttgatcggattgctccgaaacatacccagaaaatcagaaaaaattcaagga 243  Q
    ||||| |||||||||||  ||||||||||||| | | ||||||||||||||| |||||||||    
T  29519522 tttcgagctacttgatcaaattgctccgaaacttcctcagaaaatcagaaaatattcaagga 29519583  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #15
Raw Score: 78; E-Value: 3e-36
Query Start/End: Original strand, 82 - 231
Target Start/End: Complemental strand, 13801042 - 13800894
Alignment:
Q  82 ttgtaacatggatagtcattttagagaacaatattaatcttcctaactctcatcattctgttttgagtcattgttacctgttcttagtcaaaaatcaggt 181  Q
    ||||||||| |||  ||||||||  |||||||||||||||||||||||||||||||| ||||||| ||||||||||  |||||||||||||||||| | |    
T  13801042 ttgtaacatagattatcattttat-gaacaatattaatcttcctaactctcatcattatgttttgggtcattgttagttgttcttagtcaaaaatcggat 13800944  T
Q  182 tttcgggctacttgatcggattgctccgaaacatacccagaaaatcagaa 231  Q
    ||| |  ||||||||||||||||||||||||| | || ||||||||||||    
T  13800943 ttttgaactacttgatcggattgctccgaaacttgcctagaaaatcagaa 13800894  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #16
Raw Score: 74; E-Value: 8e-34
Query Start/End: Original strand, 82 - 231
Target Start/End: Original strand, 16450358 - 16450506
Alignment:
Q  82 ttgtaacatggatagtcattttagagaacaatattaatcttcctaactctcatcattctgttttgagtcattgttacctgttcttagtcaaaaatcaggt 181  Q
    ||||||||||||||  || ||||  ||||| ||||||||||||||| |||||||||| ||||||  |||||||||| ||||||||||||||||||  |||    
T  16450358 ttgtaacatggataaccagtttaaggaaca-tattaatcttcctaaatctcatcattatgttttaggtcattgttagctgttcttagtcaaaaatttggt 16450456  T
Q  182 tttcgggctacttgatcggattgctccgaaacatacccagaaaatcagaa 231  Q
    ||| ||||||||||||| ||||||| |||||| |||| ||||||||||||    
T  16450457 ttttgggctacttgatcagattgcttcgaaacttacctagaaaatcagaa 16450506  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #17
Raw Score: 72; E-Value: 1e-32
Query Start/End: Original strand, 82 - 205
Target Start/End: Complemental strand, 1945545 - 1945423
Alignment:
Q  82 ttgtaacatggatagtcattttagagaacaatattaatcttcctaactctcatcattctgttttgagtcattgttacctgttcttagtcaaaaatcaggt 181  Q
    |||||||||||||||||||||||| ||  ||||||||||||||||||||||||| |||||||||| | |||||||||||||| ||| ||||||||| | |    
T  1945545 ttgtaacatggatagtcattttagggat-aatattaatcttcctaactctcatccttctgttttgggacattgttacctgtttttattcaaaaatcggat 1945447  T
Q  182 tttcgggctacttgatcggattgc 205  Q
    ||||||| || |||||||||||||    
T  1945446 tttcgggttatttgatcggattgc 1945423  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #18
Raw Score: 71; E-Value: 5e-32
Query Start/End: Original strand, 93 - 195
Target Start/End: Original strand, 32044537 - 32044638
Alignment:
Q  93 atagtcattttagagaacaatattaatcttcctaactctcatcattctgttttgagtcattgttacctgttcttagtcaaaaatcaggttttcgggctac 192  Q
    ||||||||||||| || |||||||||||||||||||||| ||| || |||||||  ||||||||||||||||||||||||||||||||||||||||||||    
T  32044537 atagtcattttaggga-caatattaatcttcctaactcttatccttttgttttggatcattgttacctgttcttagtcaaaaatcaggttttcgggctac 32044635  T
Q  193 ttg 195  Q
    |||    
T  32044636 ttg 32044638  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #19
Raw Score: 68; E-Value: 3e-30
Query Start/End: Original strand, 109 - 224
Target Start/End: Complemental strand, 29289614 - 29289499
Alignment:
Q  109 acaatattaatcttcctaactctcatcattctgttttgagtcattgttacctgttcttagtcaaaaatcaggttttcgggctacttgatcggattgctcc 208  Q
    ||||||||||| |||||||||| |||| |||||||||  ||||||||||  ||||||||||||||||||||||||||| |||||||||||  ||||||||    
T  29289614 acaatattaattttcctaactcgcatccttctgttttaggtcattgttagatgttcttagtcaaaaatcaggttttcgtgctacttgatcaaattgctcc 29289515  T
Q  209 gaaacatacccagaaa 224  Q
    ||||| | ||||||||    
T  29289514 gaaacttccccagaaa 29289499  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #20
Raw Score: 64; E-Value: 8e-28
Query Start/End: Original strand, 156 - 271
Target Start/End: Original strand, 7412967 - 7413082
Alignment:
Q  156 tacctgttcttagtcaaaaatcaggttttcgggctacttgatcggattgctccgaaacatacccagaaaatcagaaaaaattcaaggatcatgactcccg 255  Q
    ||||||||||||| |||||||||||||||||| ||| ||||||||||||||||||||| | | ||||||||||||||||| ||||||| ||| ||||||     
T  7412967 tacctgttcttagccaaaaatcaggttttcggactagttgatcggattgctccgaaacttccacagaaaatcagaaaaaactcaaggaccataactccct 7413066  T
Q  256 tagaagggacttctta 271  Q
     ||||  |||||||||    
T  7413067 aagaaatgacttctta 7413082  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #21
Raw Score: 59; E-Value: 7e-25
Query Start/End: Original strand, 109 - 203
Target Start/End: Complemental strand, 7734315 - 7734221
Alignment:
Q  109 acaatattaatcttcctaactctcatcattctgttttgagtcattgttacctgttcttagtcaaaaatcaggttttcgggctacttgatcggatt 203  Q
    ||||||||||||||||||||| ||||| || |||||||  ||||||||| ||||||||  |||||||||||||||||||||||||||||| ||||    
T  7734315 acaatattaatcttcctaactatcatccttttgttttggatcattgttatctgttcttgatcaaaaatcaggttttcgggctacttgatcagatt 7734221  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #22
Raw Score: 56; E-Value: 5e-23
Query Start/End: Original strand, 112 - 253
Target Start/End: Complemental strand, 14037948 - 14037810
Alignment:
Q  112 atattaatcttcctaactctcatcattctgttttgagtcattgttacctgttcttagtcaaaaatcaggttttcgggctacttgatcggattgctccgaa 211  Q
    |||||||||||| ||||   |||| |||||||||  ||||||||||  ||||||||||||||||||  ||||||| ||||||||||| ||||||||| ||    
T  14037948 atattaatcttcttaac---catccttctgttttaggtcattgttagttgttcttagtcaaaaatctagttttcgtgctacttgatcagattgctccaaa 14037852  T
Q  212 acatacccagaaaatcagaaaaaattcaaggatcatgactcc 253  Q
    |||| || | ||||| |||||||  |||||||||| ||||||    
T  14037851 acatcccaataaaattagaaaaatatcaaggatcaagactcc 14037810  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #23
Raw Score: 49; E-Value: 7e-19
Query Start/End: Original strand, 109 - 213
Target Start/End: Complemental strand, 6704115 - 6704012
Alignment:
Q  109 acaatattaatcttcctaactctcatcattctgttttgagtcattgttacctgttcttagtcaaaaatcaggttttcgggctacttgatcggattgctcc 208  Q
    |||||||||||||||||||||||||||||||  ||||  |||||||||| |||||  | |||||||||| ||||||||| ||| |||||| ||||||||     
T  6704115 acaatattaatcttcctaactctcatcattcgattttaggtcattgttagctgttaat-gtcaaaaatccggttttcggactatttgatcagattgctct 6704017  T
Q  209 gaaac 213  Q
    |||||    
T  6704016 gaaac 6704012  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #24
Raw Score: 47; E-Value: 1e-17
Query Start/End: Original strand, 82 - 315
Target Start/End: Original strand, 236938 - 237173
Alignment:
Q  82 ttgtaacatggatagtcattttagagaacaatattaatcttcctaactctcatcattctgttttgagtcattgttacctgttcttagtcaaaaatcaggt 181  Q
    |||||||||||| | |||||||| || || |||||||||||||||||||||||| |||| ||||  ||||||||||  |||| | |||| |||| ||  |    
T  236938 ttgtaacatggaaaatcatttta-aggaccatattaatcttcctaactctcatcgttctattttaggtcattgttagttgttttcagtcgaaaacca-at 237035  T
Q  182 tttcgggctacttgatcggattgctccgaaacatacccagaaaatcaga-----aaaaattcaaggatcatgactcccgtagaagggacttcttacattg 276  Q
     ||| || || ||||||||||||||| ||||| |  ||| |||||||||     ||||| ||||||| || || |||| |||||||| ||||||||   |    
T  237036 attcaggttatttgatcggattgctctgaaacttggccataaaatcagaagaagaaaaaatcaaggaccaagaatcccttagaagggtcttcttac-ggg 237134  T
Q  277 actctgcccctcaaaataaaaaattacatcatttagacc 315  Q
    |||| ||||||||||||  |||||| |||| ||||||||    
T  237135 actccgcccctcaaaatccaaaattccatcgtttagacc 237173  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #25
Raw Score: 46; E-Value: 4e-17
Query Start/End: Original strand, 112 - 213
Target Start/End: Original strand, 3365838 - 3365939
Alignment:
Q  112 atattaatcttcctaactctcatcattctgttttgagtcattgttacctgttcttagtcaaaaatcaggttttcgggctacttgatcggattgctccgaa 211  Q
    |||||||||||||||||| ||||| |||||||||  ||||||||||  |||||  | ||||||||| ||||||| || |||||||||  |||||||||||    
T  3365838 atattaatcttcctaactttcatccttctgttttaggtcattgttaattgttcacactcaaaaatccggttttcaggttacttgatcatattgctccgaa 3365937  T
Q  212 ac 213  Q
    ||    
T  3365938 ac 3365939  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #26
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 112 - 175
Target Start/End: Original strand, 4893314 - 4893377
Alignment:
Q  112 atattaatcttcctaactctcatcattctgttttgagtcattgttacctgttcttagtcaaaaa 175  Q
    |||||||||||||||| ||||||| || |||||| |||||||||||  |||||||||| |||||    
T  4893314 atattaatcttcctaattctcatccttatgttttaagtcattgttagttgttcttagtaaaaaa 4893377  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #27
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 181 - 226
Target Start/End: Complemental strand, 33413403 - 33413358
Alignment:
Q  181 ttttcgggctacttgatcggattgctccgaaacatacccagaaaat 226  Q
    ||||||||||||||||||||||||||| ||||| | |||| |||||    
T  33413403 ttttcgggctacttgatcggattgctctgaaacttccccaaaaaat 33413358  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #28
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 89 - 213
Target Start/End: Complemental strand, 10310439 - 10310316
Alignment:
Q  89 atggatagtcattttagagaacaatattaatcttcctaactctcatcattctgttttgagtcattgttacctgttcttagtcaaaaatcaggttttcggg 188  Q
    ||||||||||| |||| || || |||||||||||||||||| ||||  |||| ||||  || ||||| |  |||||| |||||||||||   ||||  ||    
T  10310439 atggatagtcaattta-aggaccatattaatcttcctaactatcattcttctattttaggttattgtaagttgttctcagtcaaaaatccaatttttagg 10310341  T
Q  189 ctacttgatcggattgctccgaaac 213  Q
    ||||||| || ||||| ||||||||    
T  10310340 ctacttggtcagattgttccgaaac 10310316  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2 (Bit Score: 128; Significance: 5e-66; HSPs: 39)
Name: chr2
Description:

Target: chr2; HSP #1
Raw Score: 128; E-Value: 5e-66
Query Start/End: Original strand, 76 - 251
Target Start/End: Complemental strand, 32187885 - 32187711
Alignment:
Q  76 atatgcttgtaacatggatagtcattttagagaacaatattaatcttcctaactctcatcattctgttttgagtcattgttacctgttcttagtcaaaaa 175  Q
    ||||| |||||||||||||||||||||||| || |||||||||||||||||||||||||| |||||||||| ||||||||||||||||||| ||||||||    
T  32187885 atatgtttgtaacatggatagtcattttaggga-caatattaatcttcctaactctcatccttctgttttgggtcattgttacctgttcttggtcaaaaa 32187787  T
Q  176 tcaggttttcgggctacttgatcggattgctccgaaacatacccagaaaatcagaaaaaattcaaggatcatgact 251  Q
    || ||||||||| ||||||||||||||||||||||||| | ||||||||||||||||||||||||||| |||||||    
T  32187786 tcgggttttcggactacttgatcggattgctccgaaacttccccagaaaatcagaaaaaattcaaggaccatgact 32187711  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #2
Raw Score: 124; E-Value: 1e-63
Query Start/End: Original strand, 82 - 314
Target Start/End: Original strand, 5507563 - 5507794
Alignment:
Q  82 ttgtaacatggatagtcattttagagaacaatattaatcttcctaactctcatcattctgttttgagtcattgttacctgttcttagtcaaaaatcaggt 181  Q
    ||||||||||||||||||||||| | ||||||||||||||||  |||||||||  |||||||||| ||||||| ||||||||||||||||||||||||||    
T  5507563 ttgtaacatggatagtcattttata-aacaatattaatcttcacaactctcattcttctgttttgggtcattgctacctgttcttagtcaaaaatcaggt 5507661  T
Q  182 tttcgggctacttgatcggattgctccgaaacatacccagaaaatcag-aaaaaattcaaggatcatgactcccgtagaagggacttcttacattg-act 279  Q
    |||||||| ||||||||||||||||||||||| | ||||||||||||| ||||||||||||||||||||||||| ||||||  |||||||  || | |||    
T  5507662 tttcgggcaacttgatcggattgctccgaaacttccccagaaaatcagaaaaaaattcaaggatcatgactcccatagaagaaacttctt--atggaact 5507759  T
Q  280 ctgcccctcaaaataaaaaattacatcatttagac 314  Q
    | ||||||||||||  |||||| |||| |||||||    
T  5507760 ccgcccctcaaaatccaaaattccatcgtttagac 5507794  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #3
Raw Score: 121; E-Value: 7e-62
Query Start/End: Original strand, 85 - 317
Target Start/End: Original strand, 42894524 - 42894754
Alignment:
Q  85 taacatggatagtcattttagagaacaatattaatcttcctaactctcatcattctgttttgagtcattgttacctgttcttagtcaaaaatcaggtttt 184  Q
    ||||||||||| ||||||||| || ||||||||||||||||||||||| || |||||||||| ||||||||||| ||||||||| ||||||||  |||||    
T  42894524 taacatggataatcattttaggga-caatattaatcttcctaactctcttccttctgttttgggtcattgttacatgttcttaggcaaaaatcgagtttt 42894622  T
Q  185 cgggctacttgatcggattgctccgaaacatacccagaaaatcagaaaaaattcaaggatcatgactcccgtagaagggacttcttacattgactctgcc 284  Q
    ||| ||||||||||||||| ||||||||| | |||||||||| |||||||||||||||| |||||||||| ||||||| |||||||||   ||||| |||    
T  42894623 cggactacttgatcggattactccgaaacttccccagaaaattagaaaaaattcaaggaccatgactcccttagaaggaacttcttac-gggactccgcc 42894721  T
Q  285 cctcaaaataaaaaattacatcatttagaccca 317  Q
    |||||||||  |||||| |||| ||||||||||    
T  42894722 cctcaaaatccaaaattccatcgtttagaccca 42894754  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #4
Raw Score: 117; E-Value: 2e-59
Query Start/End: Original strand, 82 - 317
Target Start/End: Complemental strand, 25217785 - 25217551
Alignment:
Q  82 ttgtaacatggatagtcattttagagaacaatattaatcttcctaactctcatcattctgtttt-gagtcattgttacctgttcttagtcaaaaatcagg 180  Q
    ||||| |||||||||||||||| | || |||| |||||||||||||||||| || ||||||||| | |||||||||||||||||||||| ||||||| ||    
T  25217785 ttgtagcatggatagtcattttgggga-caattttaatcttcctaactctcttccttctgtttttgggtcattgttacctgttcttagtaaaaaatcggg 25217687  T
Q  181 ttttcgggctacttgatcggattgctccgaaacatacccagaaaatcagaaaaaattcaaggatcatgactcccgtagaagggacttcttacattgactc 280  Q
    |||||||||||||||||||||||||||||| || |  | |||||||||||||||||||||||| |||||||||| |||||||||||||||||   |||||    
T  25217686 ttttcgggctacttgatcggattgctccgacacttctctagaaaatcagaaaaaattcaaggaccatgactcccatagaagggacttcttac-gggactc 25217588  T
Q  281 tgcccctcaaaataaaaaattacatcatttagaccca 317  Q
     ||||||||||||  ||||||  ||| ||||||||||    
T  25217587 cgcccctcaaaatccaaaattctatcgtttagaccca 25217551  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #5
Raw Score: 116; E-Value: 7e-59
Query Start/End: Original strand, 84 - 272
Target Start/End: Original strand, 34517247 - 34517436
Alignment:
Q  84 gtaacatggatagtcattttagagaacaatattaatcttcctaactctcatcattctgttttgagtcattgttacctgttcttagtcaaaaatcaggttt 183  Q
    |||||||||||||||||||||  |||||||||||||| || ||||| ||||| || ||||||| |||||||||||||||||||||||||||||  |||||    
T  34517247 gtaacatggatagtcattttat-gaacaatattaatcatcataactttcatccttttgttttgggtcattgttacctgttcttagtcaaaaattgggttt 34517345  T
Q  184 tcgggctacttgatcggattgctccgaaacatacccagaaaatcag--aaaaaattcaaggatcatgactcccgtagaagggacttcttac 272  Q
    ||||  |||||||||||||||||||||||| |||||||||| ||||  ||||||||||||||||||||||||| |||||||||||||||||    
T  34517346 tcggaatacttgatcggattgctccgaaacttacccagaaagtcagaaaaaaaattcaaggatcatgactcccatagaagggacttcttac 34517436  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #6
Raw Score: 115; E-Value: 3e-58
Query Start/End: Original strand, 82 - 316
Target Start/End: Complemental strand, 41510438 - 41510207
Alignment:
Q  82 ttgtaacatggatagtcattttagagaacaatattaatcttcctaactctcatcattctgttttgagtcattgttacctgttcttagtcaaaaatcaggt 181  Q
    |||||||||| ||||||||||||| || |||||||||||||||||||||||||| |||||||||| ||||||||||| |||||||||| |||||   |||    
T  41510438 ttgtaacatg-atagtcattttaggga-caatattaatcttcctaactctcatccttctgttttgggtcattgttacttgttcttagttaaaaactgggt 41510341  T
Q  182 tttcgggctacttgatcggattgctccgaaacatacccagaaaatcagaaaaaattcaaggatcatgactcccgtagaagggacttcttacattgactct 281  Q
    |||||||||||||||||||||||||||||||| | || |||||||||||||||||||||||| |||||||| | ||||||| ||||||||    |||||     
T  41510340 tttcgggctacttgatcggattgctccgaaacttccctagaaaatcagaaaaaattcaaggaccatgactctcttagaaggaacttctta-tgggactcc 41510242  T
Q  282 gcccctcaaaataaaaaattacatcatttagaccc 316  Q
     |||||||||||  |||||| |||| |||||||||    
T  41510241 acccctcaaaatccaaaatttcatcgtttagaccc 41510207  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #7
Raw Score: 114; E-Value: 1e-57
Query Start/End: Original strand, 82 - 317
Target Start/End: Complemental strand, 41203196 - 41202966
Alignment:
Q  82 ttgtaacatggatagtcattttagagaacaatattaatcttcctaactctcatcattctgttttgagtcattgttacctgttcttagtcaaaaatcaggt 181  Q
    |||||||||||||||||||||||  || |||||||||||||||||||| ||||| |||||||||| |||||||||||||||||||||| ||||||  | |    
T  41203196 ttgtaacatggatagtcattttatgga-caatattaatcttcctaactttcatccttctgttttgggtcattgttacctgttcttagttaaaaattggat 41203098  T
Q  182 tttcgggctacttgatcggattgctccgaaacatacccagaaaatcagaaaaaattcaaggatcatgactcccgtagaagggacttcttacattgactct 281  Q
    |||||||| ||||||||||||||||||||||| | |||||||||| |||||||||||||||   ||||||| |||||||| |||| ||||||  |||||     
T  41203097 tttcgggcaacttgatcggattgctccgaaacttccccagaaaattagaaaaaattcaagg---atgactctcgtagaagagactccttaca-ggactcc 41203002  T
Q  282 gcccctcaaaataaaaaattacatcatttagaccca 317  Q
    |||| |||||||  |||||| |||| ||||||||||    
T  41203001 gcccatcaaaatccaaaatttcatcgtttagaccca 41202966  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #8
Raw Score: 109; E-Value: 1e-54
Query Start/End: Original strand, 82 - 317
Target Start/End: Complemental strand, 33452453 - 33452219
Alignment:
Q  82 ttgtaacatggatagtcattttagagaacaatattaatcttcctaactctcatcattctgttttgagtcattgttacctgttcttagtcaaaaatcaggt 181  Q
    |||||||||||||| ||||||||| || |||||||||||||||||||||||||  || ||||||| ||| |||||| ||||||||||||||||||| |||    
T  33452453 ttgtaacatggataatcattttaggga-caatattaatcttcctaactctcattcttttgttttgggtctttgttatctgttcttagtcaaaaatcgggt 33452355  T
Q  182 tttcgggctacttgatcggattgctccgaaacatacccagaaaatcagaa-aaaattcaaggatcatgactcccgtagaagggacttcttacattgactc 280  Q
    ||  || ||||||||||||||||||||||||| | ||||||||||||||| |||| ||||||| |||||||||| || ||| ||||||||||   |||||    
T  33452354 ttctggactacttgatcggattgctccgaaactttcccagaaaatcagaaaaaaaatcaaggaccatgactcccataaaagcgacttcttac-gggactc 33452256  T
Q  281 tgcccctcaaaataaaaaattacatcatttagaccca 317  Q
     ||||||||||||  |||||| |||| ||||||||||    
T  33452255 cgcccctcaaaatccaaaattccatcgtttagaccca 33452219  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #9
Raw Score: 108; E-Value: 4e-54
Query Start/End: Original strand, 82 - 317
Target Start/End: Complemental strand, 44465737 - 44465517
Alignment:
Q  82 ttgtaacatggatagtcattttagagaacaatattaatcttcctaactctcatcattctgttttgagtcattgttacctgttcttagtcaaaaatcaggt 181  Q
    ||||||||||| |||||||||||| || |||||||||||||||||||||||||| |||||||||| ||||||||||||| ||||||||||||||||||||    
T  44465737 ttgtaacatggttagtcattttaggga-caatattaatcttcctaactctcatccttctgttttgggtcattgttacctcttcttagtcaaaaatcaggt 44465639  T
Q  182 tttcgggctacttgatcggattgctccgaaacatacccagaaaatcagaaaaaattcaaggatcatgactcccgtagaagggacttcttacattgactct 281  Q
    ||             ||||||||||||||||  | ||||||||||||||||||||||||||| |||||||||| |||||||||||||||||   |||||     
T  44465638 tt-------------tcggattgctccgaaatttccccagaaaatcagaaaaaattcaaggaccatgactcccctagaagggacttcttac-gggactcc 44465553  T
Q  282 gcccctcaaaataaaaaattacatcatttagaccca 317  Q
    ||||||||||||  |||||| |||| ||||||||||    
T  44465552 gcccctcaaaatccaaaattccatcttttagaccca 44465517  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #10
Raw Score: 106; E-Value: 7e-53
Query Start/End: Original strand, 109 - 317
Target Start/End: Complemental strand, 41854888 - 41854680
Alignment:
Q  109 acaatattaatcttcctaactctcatcattctgttttgagtcattgttacctgttcttagtcaaaaatcaggttttcgggctacttgatcggattgctcc 208  Q
    ||||||||||||||||||||||||||| ||||||||||||||||||||| ||||||||||| ||||| | | |||| ||||||||||||||||||||||     
T  41854888 acaatattaatcttcctaactctcatccttctgttttgagtcattgttatctgttcttagttaaaaaccggatttttgggctacttgatcggattgctct 41854789  T
Q  209 gaaacatacccagaaaatcagaa-aaaattcaaggatcatgactcccgtagaagggacttcttacattgactctgcccctcaaaataaaaaattacatca 307  Q
    ||||| | ||||||||||||||| ||||||||||||||||||| ||  ||||||| ||||||||    ||||| ||||||||||||  |||||| ||||     
T  41854788 gaaacttccccagaaaatcagaaaaaaattcaaggatcatgacaccattagaaggaacttctta-tgggactccgcccctcaaaatccaaaattccatcg 41854690  T
Q  308 tttagaccca 317  Q
    ||||||||||    
T  41854689 tttagaccca 41854680  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #11
Raw Score: 103; E-Value: 4e-51
Query Start/End: Original strand, 85 - 316
Target Start/End: Complemental strand, 38308840 - 38308610
Alignment:
Q  85 taacatggatagtcattttagagaacaatattaatcttccta--actctcatcattctgttttgagtcattgttacctgttcttagtcaaaaatcaggtt 182  Q
    |||||||||| |||||||||  || |||||||||||||| ||  ||| ||||| |||||||||| ||| |||||||||||||||||||||||||| || |    
T  38308840 taacatggattgtcattttatgga-caatattaatcttcttataactatcatccttctgttttgggtc-ttgttacctgttcttagtcaaaaatcgggat 38308743  T
Q  183 ttcgggctacttgatcggattgctccgaaacatacccagaaaatcagaaaaaattcaaggatcatgactcccgtagaagggacttcttacattgactctg 282  Q
    |||||||||||||||| |||||||| ||||| | |||||||||||||||||||||||||||||||||||||| ||||||||| || |||  | ||||| |    
T  38308742 ttcgggctacttgatcagattgctctgaaacttccccagaaaatcagaaaaaattcaaggatcatgactcccttagaagggaattttta-ttggactccg 38308644  T
Q  283 cccctcaaaataaaaaattacatcatttagaccc 316  Q
    |||||||||||  |||||| |||  |||||||||    
T  38308643 cccctcaaaatccaaaattccattgtttagaccc 38308610  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #12
Raw Score: 100; E-Value: 3e-49
Query Start/End: Original strand, 76 - 251
Target Start/End: Complemental strand, 16750444 - 16750271
Alignment:
Q  76 atatgcttgtaacatggatagtcattttagagaacaatattaatcttcctaactctcatcattctgttttgagtcattgttacctgttcttagtcaaaaa 175  Q
    ||||| |||||| ||||||||||||||||| ||||||||||||||||| ||||||||||| |||||||||| |||||||||| ||||||||||| |||||    
T  16750444 atatgtttgtaatatggatagtcattttag-gaacaatattaatcttc-taactctcatccttctgttttgggtcattgttatctgttcttagtaaaaaa 16750347  T
Q  176 tcaggttttcgggctacttgatcggattgctccgaaacatacccagaaaatcagaaaaaattcaaggatcatgact 251  Q
    || | ||||||| ||||||||||||||||  ||||||| | |||||| |||||||||||||||||||| |||||||    
T  16750346 tcggattttcggactacttgatcggattgtaccgaaacttccccagacaatcagaaaaaattcaaggaccatgact 16750271  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #13
Raw Score: 100; E-Value: 3e-49
Query Start/End: Original strand, 87 - 317
Target Start/End: Original strand, 30763798 - 30764027
Alignment:
Q  87 acatggatagtcattttagagaacaatattaatcttcctaactctcatcattctgttttgagtcattgttacctgttcttagtcaaaaatcaggttttcg 186  Q
    |||| |||||||||||||  || |||||||||||||||||||||||||| |||||||||  |||||||||| ||||||||||||||||||| | |||| |    
T  30763798 acatagatagtcattttatgga-caatattaatcttcctaactctcatctttctgtttttggtcattgttagctgttcttagtcaaaaatctgatttttg 30763896  T
Q  187 ggctacttgatcggattgctccgaaacatacccagaaaatcag-aaaaaattcaaggatcatgactcccgtagaagggacttcttacattgactctgccc 285  Q
    ||| ||||||||||||||||||||||| | | ||||||||||| |||||| |||| ||||| ||||| | |||||||||||||||||   ||||| ||||    
T  30763897 ggcaacttgatcggattgctccgaaacttcctcagaaaatcagaaaaaaaatcaaagatcaagactctcatagaagggacttcttac-gggactccgccc 30763995  T
Q  286 ctcaaaataaaaaattacatcatttagaccca 317  Q
    ||||||||  |||||| |||| | ||||||||    
T  30763996 ctcaaaatccaaaatttcatcgtctagaccca 30764027  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #14
Raw Score: 100; E-Value: 3e-49
Query Start/End: Original strand, 82 - 315
Target Start/End: Original strand, 39447306 - 39447532
Alignment:
Q  82 ttgtaacatggatagtcattttagagaacaatattaatcttcctaactctcatcattctgttttgagtcattgttacctgttcttagtcaaaaatcaggt 181  Q
    ||||||||||||||||||||||| ||| |||||||||||||||||||||||||| |||| ||||| ||||||||||| |||||||||||||||||| |||    
T  39447306 ttgtaacatggatagtcattttaaaga-caatattaatcttcctaactctcatccttctattttgggtcattgttacatgttcttagtcaaaaatcgggt 39447404  T
Q  182 tttcgggctacttgatcggattgctccgaaacatacccagaaaatcag-aaaaaattcaaggatcatgactcccgtagaagggacttcttacattgactc 280  Q
     ||| | || |||||||||||||||| ||||| | || |||||||||| |||||||||||||| ||||       |||||||||||||||||   |||||    
T  39447405 cttccgactgcttgatcggattgctctgaaacttccctagaaaatcagaaaaaaattcaaggaccatg------ctagaagggacttcttac-gggactc 39447497  T
Q  281 tgcccctcaaaataaaaaattacatcatttagacc 315  Q
     ||||||||||||  ||||||||||| ||||||||    
T  39447498 cgcccctcaaaatccaaaattacatcgtttagacc 39447532  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #15
Raw Score: 99; E-Value: 1e-48
Query Start/End: Original strand, 127 - 317
Target Start/End: Complemental strand, 38065543 - 38065354
Alignment:
Q  127 actctcatcattctgttttgagtcattgttacctgttcttagtcaaaaatcaggttttcgggctacttgatcggattgctccgaaacatacccagaaaat 226  Q
    ||||||||  |||||||||| || ||||||||||||||||||| |||||| || ||||| ||||| ||||||||||||||||||||| | |||| |||||    
T  38065543 actctcattcttctgttttgggttattgttacctgttcttagtaaaaaattagattttcaggctatttgatcggattgctccgaaactttcccataaaat 38065444  T
Q  227 cagaaaaaattcaaggatcatgactcccgtagaagggacttcttacattgactctgcccctcaaaataaaaaattacatcatttagaccca 317  Q
    ||||||||||||||||||||||||||| ||||||| ||||||||||   ||||| ||||||||||||  |||||| |||| ||||||||||    
T  38065443 cagaaaaaattcaaggatcatgactcctgtagaagagacttcttac-gggactccgcccctcaaaatccaaaatttcatcgtttagaccca 38065354  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #16
Raw Score: 97; E-Value: 2e-47
Query Start/End: Original strand, 82 - 317
Target Start/End: Complemental strand, 15995123 - 15994896
Alignment:
Q  82 ttgtaacatggatagtcattttagagaacaatattaatcttcctaactctcatcattctgttttgagtcattgttacctgttcttagtcaaaaatcaggt 181  Q
    |||||||||||||||||||||||  || ||||||||||||| ||||||||||||||||||||||| ||||||||||| |||||||||| ||||||  | |    
T  15995123 ttgtaacatggatagtcattttatgga-caatattaatctttctaactctcatcattctgttttgggtcattgttacatgttcttagtaaaaaattggat 15995025  T
Q  182 tttcgggctacttgatcggattgctccgaaacatacccagaaaatcagaaaaaattcaaggatcatgactcccgtagaagggacttcttacattgactct 281  Q
    |||| | ||| ||||||||||||||||||||| | |||| ||||||||||||||||||||      ||||| | ||||| |||||||||||   |||||     
T  15995024 tttcagactatttgatcggattgctccgaaacttccccataaaatcagaaaaaattcaag------gactctcatagaatggacttcttac-gggactcc 15994932  T
Q  282 gcccctcaaaataaaaaattacatcatttagaccca 317  Q
    ||||||||||||  |||||| |||| ||||||||||    
T  15994931 gcccctcaaaatccaaaatttcatcgtttagaccca 15994896  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #17
Raw Score: 93; E-Value: 4e-45
Query Start/End: Original strand, 82 - 271
Target Start/End: Complemental strand, 19110025 - 19109835
Alignment:
Q  82 ttgtaacatggatagtcattttagagaacaatattaatcttcctaactctcatcattctgttttgagtcattgttacctgttcttagtcaaaaatcaggt 181  Q
    ||||||||||||| ||||||||| || | ||||||||||||||||||||||||| || | ||||| |||||||||| |||||||||||||||||||  ||    
T  19110025 ttgtaacatggatcgtcatttta-aggataatattaatcttcctaactctcatccttttattttgggtcattgttagctgttcttagtcaaaaatccagt 19109927  T
Q  182 tttcgggctacttgatcggattgctccgaaacatacccagaaaatcag--aaaaaattcaaggatcatgactcccgtagaagggacttctta 271  Q
    ||| || ||||||||||||||||||||||||| |  ||||||| ||||  |||||| |||||||||| ||||| | ||||||||||||||||    
T  19109926 ttttggactacttgatcggattgctccgaaacttcaccagaaattcaggaaaaaaaatcaaggatcaagactctcatagaagggacttctta 19109835  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #18
Raw Score: 91; E-Value: 6e-44
Query Start/End: Original strand, 82 - 260
Target Start/End: Original strand, 36875129 - 36875305
Alignment:
Q  82 ttgtaacatggatagtcattttagagaacaatattaatcttcctaactctcatcattctgttttgagtcattgttacctgttcttagtcaaaaatcaggt 181  Q
    |||||||||||||||||||||||| ||  ||||||||||||||||||||||||| |||||||||| |||||||||||| |||||||| |||||||| |||    
T  36875129 ttgtaacatggatagtcattttagggat-aatattaatcttcctaactctcatccttctgttttgggtcattgttacccgttcttaggcaaaaatcgggt 36875227  T
Q  182 tttcgggctacttgatcggattgctccgaaacatacccagaaaatcagaaaaaattcaaggatcatgactcccgtagaa 260  Q
    |||| | |||||| |||| ||||||||||| | | |||| ||||| | ||||||||||||||  |||||||||||||||    
T  36875228 tttcagactacttaatcgaattgctccgaatcttccccataaaat-aaaaaaaattcaaggactatgactcccgtagaa 36875305  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #19
Raw Score: 84; E-Value: 9e-40
Query Start/End: Original strand, 112 - 271
Target Start/End: Original strand, 42478916 - 42479075
Alignment:
Q  112 atattaatcttcctaactctcatcattctgttttgagtcattgttacctgttcttagtcaaaaatcaggttttcgggctacttgatcggattgctccgaa 211  Q
    |||||||||||||||||||||||| || ||||||  |||||||||| | ||||| ||||||||||   ||||||||||||||||||| |||||||| |||    
T  42478916 atattaatcttcctaactctcatccttatgttttaggtcattgttagccgttctcagtcaaaaattcagttttcgggctacttgatcagattgctctgaa 42479015  T
Q  212 acatacccagaaaatcagaaaaaattcaaggatcatgactcccgtagaagggacttctta 271  Q
    || | |||| ||||||| |||||| |||||||||| |||||||||||||| |||||||||    
T  42479016 acttccccaaaaaatcataaaaaaatcaaggatcaagactcccgtagaagagacttctta 42479075  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #20
Raw Score: 79; E-Value: 9e-37
Query Start/End: Original strand, 82 - 317
Target Start/End: Complemental strand, 17474809 - 17474575
Alignment:
Q  82 ttgtaacatggatagtcattttagagaacaatattaatcttcctaactctcatcattctgttttgagtcattgttacctgttcttagtcaaaaatcaggt 181  Q
    ||||||||||||||||||||||||||| ||||||||||||||||||||||||| |||||||| || | ||||||||||||||||| |||||||||| |||    
T  17474809 ttgtaacatggatagtcattttagaga-caatattaatcttcctaactctcataattctgttatgcggcattgttacctgttcttcgtcaaaaatcgggt 17474711  T
Q  182 tttcgggctacttgatc--ggattgctccgaaacatacccagaaaatcagaaaaaattcaaggatcatgactcccgtagaagggacttcttacattgact 279  Q
    ||||   |   | || |   || | | | ||||| | ||||||||||||||||||||||||||| |||||||||| ||||||  |||||||||   ||||    
T  17474710 tttc-atcgtttagacccatgacttcccagaaacttccccagaaaatcagaaaaaattcaaggaccatgactcccttagaagaaacttcttac-gggact 17474613  T
Q  280 ctgcccctcaaaataaaaaattacatcatttagaccca 317  Q
    | ||||||||||||  |||||| |||| ||||||||||    
T  17474612 ccgcccctcaaaatccaaaattccatcgtttagaccca 17474575  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #21
Raw Score: 73; E-Value: 3e-33
Query Start/End: Original strand, 82 - 271
Target Start/End: Original strand, 35251074 - 35251264
Alignment:
Q  82 ttgtaacatggatagtcattttagagaacaatattaatcttcctaactctcatcattctgttttgagtcattgttacctgttcttagtcaaaaatcaggt 181  Q
    |||||| |||||||| || |||| || || |||||||||||| ||||||  ||| |||| ||||  ||||||||||  ||||||||||| |||||| |||    
T  35251074 ttgtaatatggatagccagttta-aggaccatattaatcttcttaactcctatccttctattttaggtcattgttagttgttcttagtcgaaaatccggt 35251172  T
Q  182 tttcgggctacttgatcggattgctccgaaacatacccagaaaatc--agaaaaaattcaaggatcatgactcccgtagaagggacttctta 271  Q
    ||||||||||||||||| |||||||||||||| | |||||||||||  ||||||||  ||||||||| ||||||| ||||| | ||||||||    
T  35251173 tttcgggctacttgatcagattgctccgaaactttcccagaaaatcagagaaaaaaaccaaggatcaagactcccatagaaagtacttctta 35251264  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #22
Raw Score: 72; E-Value: 1e-32
Query Start/End: Original strand, 166 - 317
Target Start/End: Original strand, 27670723 - 27670873
Alignment:
Q  166 tagtcaaaaatcaggttttcgggctacttgatcggattgctccgaaacatacccagaaaatcagaaaaaattcaaggatcatgactcccgtagaagggac 265  Q
    |||||||||||| ||||||||| ||||||||||||||||||||||||| | |||| ||||||||||||||||||| || |||||||||| |||||| |||    
T  27670723 tagtcaaaaatcgggttttcggactacttgatcggattgctccgaaactttcccataaaatcagaaaaaattcaacgaccatgactcccttagaagagac 27670822  T
Q  266 ttcttacattgactctgcccctcaaaataaaaaattacatcatttagaccca 317  Q
     |||||    ||||| ||||||||||||  |||||| |||| ||||||||||    
T  27670823 ctctta-tgggactccgcccctcaaaattcaaaattccatcgtttagaccca 27670873  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #23
Raw Score: 67; E-Value: 1e-29
Query Start/End: Original strand, 109 - 235
Target Start/End: Original strand, 8388821 - 8388947
Alignment:
Q  109 acaatattaatcttcctaactctcatcattctgttttgagtcattgttacctgttcttagtcaaaaatcaggttttcgggctacttgatcggattgctcc 208  Q
    ||||||||||||||||||||||||||| ||| |||||| |||||||||  |||||||||||| |||||| |||||||| |||||||||| | | ||||||    
T  8388821 acaatattaatcttcctaactctcatccttcagttttgggtcattgttggctgttcttagtctaaaatcgggttttcgagctacttgattgaaatgctcc 8388920  T
Q  209 gaaacatacccagaaaatcagaaaaaa 235  Q
    ||||  |  ||||||||||||||||||    
T  8388921 gaaaattttccagaaaatcagaaaaaa 8388947  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #24
Raw Score: 67; E-Value: 1e-29
Query Start/End: Original strand, 82 - 176
Target Start/End: Complemental strand, 45153801 - 45153708
Alignment:
Q  82 ttgtaacatggatagtcattttagagaacaatattaatcttcctaactctcatcattctgttttgagtcattgttacctgttcttagtcaaaaat 176  Q
    |||||||||||||||||||||||| || |||||||||||||| ||||||||||| |||||||||| ||||||||||||||||||||||| |||||    
T  45153801 ttgtaacatggatagtcattttaggga-caatattaatcttcttaactctcatccttctgttttgggtcattgttacctgttcttagtccaaaat 45153708  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #25
Raw Score: 66; E-Value: 5e-29
Query Start/End: Original strand, 112 - 229
Target Start/End: Original strand, 45293813 - 45293930
Alignment:
Q  112 atattaatcttcctaactctcatcattctgttttgagtcattgttacctgttcttagtcaaaaatcaggttttcgggctacttgatcggattgctccgaa 211  Q
    |||||||||||||||||||||||| |||||||||  ||||||| ||  |||||||||||||||||| ||||||||||||||||||||  ||||||| |||    
T  45293813 atattaatcttcctaactctcatctttctgttttaggtcattgctagttgttcttagtcaaaaatccggttttcgggctacttgatcatattgctctgaa 45293912  T
Q  212 acatacccagaaaatcag 229  Q
    || | |||| ||||||||    
T  45293913 actttcccataaaatcag 45293930  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #26
Raw Score: 58; E-Value: 3e-24
Query Start/End: Original strand, 112 - 272
Target Start/End: Original strand, 26228239 - 26228404
Alignment:
Q  112 atattaatcttcctaactctcatcattctgttttgagtcattgttacctgttcttagtcaaaaatcaggttttcgggctacttgatcggattgctccgaa 211  Q
    ||||||||||| |||||||||||| || ||||||  || |||||||  ||||||||||||||||||  ||||||| ||||||||||| ||||  ||||||    
T  26228239 atattaatcttgctaactctcatccttttgttttaggtaattgttagttgttcttagtcaaaaatctagttttcgagctacttgatcagattcgtccgaa 26228338  T
Q  212 acatacccagaaaatcag-----aaaaaattcaaggatcatgactcccgtagaagggacttcttac 272  Q
    || | |||| ||||||||     |||||| ||| |||||| ||||||| ||||||| |||||||||    
T  26228339 acttccccataaaatcagaagaaaaaaaaatcatggatcaagactcccatagaaggaacttcttac 26228404  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #27
Raw Score: 54; E-Value: 7e-22
Query Start/End: Original strand, 22 - 83
Target Start/End: Complemental strand, 18506820 - 18506759
Alignment:
Q  22 acaacgagaccaccatctttagatgtagtgattccaagcaaagaagaactatctatatgctt 83  Q
    |||| |||||||||||||||||||||||||||||||||||||||||| ||||||||||||||    
T  18506820 acaatgagaccaccatctttagatgtagtgattccaagcaaagaagagctatctatatgctt 18506759  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #28
Raw Score: 54; E-Value: 7e-22
Query Start/End: Original strand, 22 - 83
Target Start/End: Complemental strand, 18513318 - 18513257
Alignment:
Q  22 acaacgagaccaccatctttagatgtagtgattccaagcaaagaagaactatctatatgctt 83  Q
    |||| |||||||||||||||||||||||||||||||||||||||||| ||||||||||||||    
T  18513318 acaatgagaccaccatctttagatgtagtgattccaagcaaagaagagctatctatatgctt 18513257  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #29
Raw Score: 53; E-Value: 3e-21
Query Start/End: Original strand, 82 - 293
Target Start/End: Complemental strand, 37773826 - 37773616
Alignment:
Q  82 ttgtaacatggatagtcattttagagaacaatattaatcttcctaactctcatcattctgttttgagtcattgttacctgttcttagtcaaaaat-cagg 180  Q
    ||||||||||||||| || |||| || || || |||||||| |||||||||||| |||||||||   |||||||||  ||||||||||||||| | |||     
T  37773826 ttgtaacatggatagccagttta-aggactatgttaatctttctaactctcatccttctgttttagttcattgttagttgttcttagtcaaaagtccagt 37773728  T
Q  181 ttttcgggctacttgatcggattgctccgaaacatacccagaaaatcagaaaaaattcaaggatcatgactcccgtagaagggacttcttacattgactc 280  Q
     ||| ||||||||||||| |||||||| ||||  |   |  ||||| |||||||| |||||| |||  ||||| |||||||| ||||||||||  |||||    
T  37773727 attttgggctacttgatcagattgctctgaaatgtctacgaaaaattagaaaaaaatcaaggttcaaaactcctgtagaaggaacttcttaca-ggactc 37773629  T
Q  281 tgcccctcaaaat 293  Q
     ||||||||||||    
T  37773628 cgcccctcaaaat 37773616  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #30
Raw Score: 51; E-Value: 4e-20
Query Start/End: Original strand, 109 - 187
Target Start/End: Complemental strand, 36948929 - 36948851
Alignment:
Q  109 acaatattaatcttcctaactctcatcattctgttttgagtcattgttacctgttcttagtcaaaaatcaggttttcgg 187  Q
    ||||||||||||||||||||||| ||| || ||||||| || ||||||||||||||||||||||||||  |||||||||    
T  36948929 acaatattaatcttcctaactcttatccttttgttttgggtaattgttacctgttcttagtcaaaaattgggttttcgg 36948851  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #31
Raw Score: 50; E-Value: 2e-19
Query Start/End: Original strand, 22 - 83
Target Start/End: Complemental strand, 18486969 - 18486908
Alignment:
Q  22 acaacgagaccaccatctttagatgtagtgattccaagcaaagaagaactatctatatgctt 83  Q
    |||| ||||||||||||||||||||| |||||||||||||||||||| ||||||||||||||    
T  18486969 acaatgagaccaccatctttagatgttgtgattccaagcaaagaagagctatctatatgctt 18486908  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #32
Raw Score: 48; E-Value: 3e-18
Query Start/End: Original strand, 82 - 273
Target Start/End: Complemental strand, 32069248 - 32069059
Alignment:
Q  82 ttgtaacatggatagtcattttagagaacaatattaatcttcctaactctcatcattctgttttgagtcattgttacctgttcttagtcaaaaatcaggt 181  Q
    ||||| ||||||||| || |||| || || |||||| |||||||| |||||||  || ||||||  ||||||| ||  |||||| | |||||||||  ||    
T  32069248 ttgtatcatggatagccaattta-aggaccatattagtcttcctagctctcatacttatgttttaggtcattgatagatgttctcactcaaaaatcttgt 32069150  T
Q  182 tttcgggctacttgatcggattgctccgaaacatacccagaaaatcagaaaaaattcaaggatcatgactcccgtagaagggacttcttaca 273  Q
    |||| |||||||| ||| |||||||| ||||| | |||| ||||| |||||||  |||||||||||||||| | ||| || |||||||||||    
T  32069149 tttcaggctacttaatcagattgctctgaaactttccca-aaaattagaaaaatatcaaggatcatgactctcctagtagtgacttcttaca 32069059  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #33
Raw Score: 43; E-Value: 0.000000000000003
Query Start/End: Original strand, 111 - 313
Target Start/End: Complemental strand, 33440491 - 33440291
Alignment:
Q  111 aatattaatcttcctaactctcatcattctgttttgagtcattgttacctgttcttagtcaaaaatcaggttttcgggctacttgatcggattgctccga 210  Q
    |||||||||||| ||||| |||||| |||||||||| |||||||||  |||||| | || ||||||  |||| || | |||||||| | | |||||||||    
T  33440491 aatattaatctttctaac-ctcatccttctgttttgggtcattgttcactgttcatggtaaaaaatacggttatcagactacttgaccaggttgctccga 33440393  T
Q  211 aacatacccagaaaatcagaaaaaattcaaggatcatgactcccgtagaagggacttcttacattgactctgcccctcaaaataaaaaattacatcattt 310  Q
    ||| | ||||||||||||| |||     |||||||| ||||||  || ||||||||||||||   ||||| ||| ||||||||  |||||| |||| |||    
T  33440392 aacttccccagaaaatcaggaaaggcctaaggatcaagactcctataaaagggacttcttac-gggactccgcctctcaaaattcaaaattccatcgttt 33440294  T
Q  311 aga 313  Q
    |||    
T  33440293 aga 33440291  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #34
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 82 - 145
Target Start/End: Complemental strand, 17766839 - 17766777
Alignment:
Q  82 ttgtaacatggatagtcattttagagaacaatattaatcttcctaactctcatcattctgtttt 145  Q
    ||||||||| ||||||||||||| || ||||||||||||||||||||||||||| || ||||||    
T  17766839 ttgtaacattgatagtcatttta-aggacaatattaatcttcctaactctcatccttgtgtttt 17766777  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #35
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 112 - 228
Target Start/End: Original strand, 41204105 - 41204221
Alignment:
Q  112 atattaatcttcctaactctcatcattctgttttgagtcattgttacctgttcttagtcaaaaatcaggttttcgggctacttgatcggattgctccgaa 211  Q
    |||||||| |||||||||| |||||||||||||| |||  ||||||  || | | ||||  ||||| | |||||| |||||| |||| ||||||||||||    
T  41204105 atattaattttcctaactcccatcattctgttttaagttgttgttagttggtttcagtcggaaatccgattttcgagctactcgatcagattgctccgaa 41204204  T
Q  212 acatacccagaaaatca 228  Q
    || | |||| |||||||    
T  41204205 actttcccaaaaaatca 41204221  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #36
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 82 - 145
Target Start/End: Complemental strand, 34519547 - 34519485
Alignment:
Q  82 ttgtaacatggatagtcattttagagaacaatattaatcttcctaactctcatcattctgtttt 145  Q
    |||||||||||||| |||||||| || ||||||||||||||||||||| ||||| || ||||||    
T  34519547 ttgtaacatggataatcatttta-aggacaatattaatcttcctaactttcatccttatgtttt 34519485  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #37
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 137 - 213
Target Start/End: Complemental strand, 13704768 - 13704692
Alignment:
Q  137 ttctgttttgagtcattgttacctgttcttagtcaaaaatcaggttttcgggctacttgatcggattgctccgaaac 213  Q
    |||||||||  || |||||||  |||| | ||||||||||| | |||||||||||||||||| |||||||| |||||    
T  13704768 ttctgttttaggttattgttagttgttttcagtcaaaaatccgattttcgggctacttgatcagattgctctgaaac 13704692  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #38
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 82 - 145
Target Start/End: Complemental strand, 9847222 - 9847160
Alignment:
Q  82 ttgtaacatggatagtcattttagagaacaatattaatcttcctaactctcatcattctgtttt 145  Q
    ||||||||| ||||||||||||| || ||||||||||||||| ||||| ||||| || ||||||    
T  9847222 ttgtaacattgatagtcatttta-aggacaatattaatcttcataactttcatccttgtgtttt 9847160  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #39
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 76 - 133
Target Start/End: Complemental strand, 38066689 - 38066633
Alignment:
Q  76 atatgcttgtaacatggatagtcattttagagaacaatattaatcttcctaactctca 133  Q
    ||||| |||||| |||||||||||||||| || ||||||||||||||| | |||||||    
T  38066689 atatgtttgtaaaatggatagtcatttta-aggacaatattaatcttcattactctca 38066633  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0010 (Bit Score: 116; Significance: 7e-59; HSPs: 1)
Name: scaffold0010
Description:

Target: scaffold0010; HSP #1
Raw Score: 116; E-Value: 7e-59
Query Start/End: Original strand, 82 - 272
Target Start/End: Original strand, 140629 - 140819
Alignment:
Q  82 ttgtaacatggatagtcattttagagaacaatattaatcttcctaactctcatcattctgttttgagtcattgttacctgttcttagtcaaaaatcaggt 181  Q
    ||||||||| |||||||||||||| || |||||||||||||||||||||||||| || ||||||  ||||||||||| |||||||||||||||||| |||    
T  140629 ttgtaacattgatagtcattttaggga-caatattaatcttcctaactctcatccttttgttttaggtcattgttacttgttcttagtcaaaaatcgggt 140727  T
Q  182 tttcgggctacttgatcggattgctccgaaacatacccagaaaatcag-aaaaaattcaaggatcatgactcccgtagaagggacttcttac 272  Q
    |||| | ||||||||||||||||||||||||| | ||||||||||||| |||||||||||||| |||||||||| || ||||||||||||||    
T  140728 tttcagactacttgatcggattgctccgaaacttccccagaaaatcagaaaaaaattcaaggaccatgactcccataaaagggacttcttac 140819  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0508 (Bit Score: 104; Significance: 1e-51; HSPs: 1)
Name: scaffold0508
Description:

Target: scaffold0508; HSP #1
Raw Score: 104; E-Value: 1e-51
Query Start/End: Original strand, 82 - 271
Target Start/End: Complemental strand, 3410 - 3220
Alignment:
Q  82 ttgtaacatggatagtcattttagagaacaatattaatcttcctaactctcatcattctgttttgagtcattgttacctgttcttagtcaaaaa-tcagg 180  Q
    ||||||||| |||| ||||||||| || |||||||||||||| ||||||||||| |||||||||| ||||||||||| |||||||||| ||||| |||||    
T  3410 ttgtaacatcgataatcattttaggga-caatattaatcttcgtaactctcatccttctgttttgggtcattgttacttgttcttagtaaaaaaatcagg 3312  T
Q  181 ttttcgggctacttgatcggattgctccgaaacatacccagaaaatcagaa-aaaattcaaggatcatgactcccgtagaagggacttctta 271  Q
    |||||||||||||||||| |||||||| ||||| | ||||||||||||||| |||||| ||||| |||||| ||| ||||||||||||||||    
T  3311 ttttcgggctacttgatcagattgctctgaaacttccccagaaaatcagaaaaaaatttaaggaccatgacccccttagaagggacttctta 3220  T

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Target: scaffold0027 (Bit Score: 97; Significance: 2e-47; HSPs: 1)
Name: scaffold0027
Description:

Target: scaffold0027; HSP #1
Raw Score: 97; E-Value: 2e-47
Query Start/End: Original strand, 82 - 238
Target Start/End: Complemental strand, 141978 - 141824
Alignment:
Q  82 ttgtaacatggatagtcattttagagaacaatattaatcttcctaactctcatcattctgttttgagtcattgttacctgttcttagtcaaaaatcaggt 181  Q
    |||||||||||||||||||||||| || ||||||||||||||||||||| |||| |||||||| | ||||||||| | |||||||||||||||||| |||    
T  141978 ttgtaacatggatagtcattttaggga-caatattaatcttcctaactcccatccttctgtttgg-gtcattgttgcatgttcttagtcaaaaatcgggt 141881  T
Q  182 tttcgggctacttgatcggattgctccgaaacatacccagaaaatcagaaaaaattc 238  Q
    |||| | ||||||||||||||||||||||||| | ||||||||||||||||||||||    
T  141880 tttcagactacttgatcggattgctccgaaacttccccagaaaatcagaaaaaattc 141824  T

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Target: scaffold0137 (Bit Score: 96; Significance: 6e-47; HSPs: 1)
Name: scaffold0137
Description:

Target: scaffold0137; HSP #1
Raw Score: 96; E-Value: 6e-47
Query Start/End: Original strand, 82 - 317
Target Start/End: Complemental strand, 9512 - 9280
Alignment:
Q  82 ttgtaacatggatagtcattttagagaacaatattaatcttcctaactctcatcattctgttttgagtcattgttacctgttcttagtcaaaaatcaggt 181  Q
    |||||||||||||||||||||||  || |||||||||| ||  ||||| |||||||||||||||| ||||||||||| |||||||||| ||||||| | |    
T  9512 ttgtaacatggatagtcattttatgga-caatattaatatttataactttcatcattctgttttgggtcattgttacatgttcttagttaaaaatcggat 9414  T
Q  182 tttcgggctacttgatcggattgctccgaaacatacccagaaaatcagaaaaaattcaaggatcatgactcccgtagaagggacttcttacattgactct 281  Q
    ||||||  |||||||||||||||||| ||||| | || ||||||||||| |||||||||||| | |||||||| ||||| |||||||||||   |||||     
T  9413 tttcggattacttgatcggattgctctgaaacttgcctagaaaatcagagaaaattcaaggaccttgactcccttagaa-ggacttcttac-gggactcc 9316  T
Q  282 gcccctcaaaataaaaaattacatcatttagaccca 317  Q
    ||||||||||||  |||||  |||| ||||||||||    
T  9315 gcccctcaaaattcaaaataccatcgtttagaccca 9280  T

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Target: scaffold0018 (Bit Score: 63; Significance: 3e-27; HSPs: 1)
Name: scaffold0018
Description:

Target: scaffold0018; HSP #1
Raw Score: 63; E-Value: 3e-27
Query Start/End: Original strand, 196 - 314
Target Start/End: Complemental strand, 174263 - 174146
Alignment:
Q  196 atcggattgctccgaaacatacccagaaaatcagaaaaaattcaaggatcatgactcccgtagaagggacttcttacattgactctgcccctcaaaataa 295  Q
    |||||||||||||||||| | || |||||||||||||||||||||||| ||||||||| ||||||||||||||||||   ||||| ||||||||||||      
T  174263 atcggattgctccgaaacttccctagaaaatcagaaaaaattcaaggaccatgactcctgtagaagggacttcttac-gagactccgcccctcaaaattc 174165  T
Q  296 aaaattacatcatttagac 314  Q
    |||||| |||| |||||||    
T  174164 aaaattccatcgtttagac 174146  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0564 (Bit Score: 57; Significance: 1e-23; HSPs: 1)
Name: scaffold0564
Description:

Target: scaffold0564; HSP #1
Raw Score: 57; E-Value: 1e-23
Query Start/End: Original strand, 82 - 314
Target Start/End: Original strand, 4515 - 4745
Alignment:
Q  82 ttgtaacatggatagtcattttagagaacaatattaatcttcctaactctcatcattctgttttgagtcattgttacctgttcttagtcaaaaatcaggt 181  Q
    |||||| || ||||||||||||| ||| || ||||||||||| ||||  |||||||| |||||   ||||||||||  ||||| ||||| |||||  |||    
T  4515 ttgtaaaatagatagtcattttaaagacca-tattaatcttcttaaccatcatcattatgtttgaggtcattgttagttgttcctagtccaaaatacggt 4613  T
Q  182 tttcgggctacttgatcggattgctccgaaacatacccagaaaatcagaaaaaattcaaggatcatgactcccgtagaagggacttcttacattgactct 281  Q
    ||| | |||| ||||||||||||||||||||| |  ||||||||||| |||||| | ||||| |  |||| ||  | ||||||||||||||   |||||     
T  4614 ttttgagctatttgatcggattgctccgaaacttggccagaaaatcataaaaaaataaaggaacgagacttcctcaaaagggacttcttac-gggactcc 4712  T
Q  282 gcccctcaaaataaaaaattacatcatttagac 314  Q
     |||||||||||  ||||||||||| |||||||    
T  4713 acccctcaaaatccaaaattacatcgtttagac 4745  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0182 (Bit Score: 43; Significance: 0.000000000000003; HSPs: 1)
Name: scaffold0182
Description:

Target: scaffold0182; HSP #1
Raw Score: 43; E-Value: 0.000000000000003
Query Start/End: Original strand, 82 - 140
Target Start/End: Original strand, 23246 - 23303
Alignment:
Q  82 ttgtaacatggatagtcattttagagaacaatattaatcttcctaactctcatcattct 140  Q
    |||||||||||||||||||||||| || |||||||||||||||||||||||||| ||||    
T  23246 ttgtaacatggatagtcattttaggga-caatattaatcttcctaactctcatccttct 23303  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0006 (Bit Score: 37; Significance: 0.00000000001; HSPs: 2)
Name: scaffold0006
Description:

Target: scaffold0006; HSP #1
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 82 - 213
Target Start/End: Complemental strand, 59985 - 59855
Alignment:
Q  82 ttgtaacatggatagtcattttagagaacaatattaatcttcctaactc-tcatcattctgttttgagtcattgttacctgttcttagtcaaaaatcagg 180  Q
    ||||||||| ||||||||||||| ||| ||||||||||||||||||||| |    | ||  ||| | |||||||||| | ||||||||||||||||  |     
T  59985 ttgtaacatagatagtcattttaaaga-caatattaatcttcctaactcatggatagtcattttag-gtcattgttagccgttcttagtcaaaaatttga 59888  T
Q  181 ttttcgggctacttgatcggattgctccgaaac 213  Q
    |||||||| ||||||||| |||| |||||||||    
T  59887 ttttcgggttacttgatcagatttctccgaaac 59855  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0006; HSP #2
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 82 - 130
Target Start/End: Original strand, 59504 - 59551
Alignment:
Q  82 ttgtaacatggatagtcattttagagaacaatattaatcttcctaactc 130  Q
    |||| |||||||||||||||||| || |||||||||||||| |||||||    
T  59504 ttgtgacatggatagtcatttta-aggacaatattaatctttctaactc 59551  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]



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