View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF14614_low_26 (Length: 389)
Name: NF14614_low_26
Description: NF14614
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF14614_low_26 |
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Alignment Details
Target: chr1 (Bit Score: 267; Significance: 1e-149; HSPs: 1)
Name: chr1
Description:
Target: chr1; HSP #1
Raw Score: 267; E-Value: 1e-149
Query Start/End: Original strand, 6 - 371
Target Start/End: Complemental strand, 14198471 - 14198117
Alignment:
| Q |
6 |
aagaaaatcccttaaatttctcttcttccccctcttatggtacctcagtgattttcactctcaaagtgtttcctatttatttcacaatcctaaattcgcg |
105 |
Q |
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| T |
14198471 |
aagaaaatcccttaaatttctcttcttccccctcttatggtacctcaatgattttcactctcaaagtgtttcctatttatttcacaatcctaaattcgta |
14198372 |
T |
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| Q |
106 |
tcacaaaaccctcaacccaaaacattttggagtttcatctttgttggtgttgactctcacccgataatctcacaagaagaactctacacaagaaccatga |
205 |
Q |
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|||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||| ||||||||||||||||||||| |
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| T |
14198371 |
ctacaaaaccctcaacccaaaacattttggagtttcatctttgttggtgttgactctcgcccgataatctcacaagaataactctacacaagaaccatga |
14198272 |
T |
|
| Q |
206 |
acttctctttgtgtttcctttccttgcctcccagtattgtctacaagtatctttctacaaaaggcaccaacccttttcaaagaatcacctcttataattc |
305 |
Q |
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||||||| ||||||||||||| |||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||| |||| |
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| T |
14198271 |
acttctc--tgtgtttcctttctttgcctcccagtcttgtctacaagtatctttctacaaaaggcaccaacccttttcaaagaatcaccttttat----- |
14198179 |
T |
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| Q |
306 |
tccaaattctccaagatttcatctttgcgggcgtcttgcatccctgtgcttccagctagtggaagc |
371 |
Q |
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| T |
14198178 |
----agttctccaagatttcatctttgtgggcgtcttgcatccccgtgcttccaactagtggaagc |
14198117 |
T |
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