View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF14614_low_31 (Length: 357)
Name: NF14614_low_31
Description: NF14614
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF14614_low_31 |
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Alignment Details
Target: chr4 (Bit Score: 287; Significance: 1e-161; HSPs: 1)
Name: chr4
Description:
Target: chr4; HSP #1
Raw Score: 287; E-Value: 1e-161
Query Start/End: Original strand, 11 - 320
Target Start/End: Original strand, 45723690 - 45724004
Alignment:
| Q |
11 |
caaagggtgtctttattggtggtgggacaaagaaaacgttctcttttgtggtgcttgatgaggaagtggacaagaaagagaacaaaaagtggggttgctg |
110 |
Q |
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| T |
45723690 |
caaagggtgtctttattggtggtgggacaaagaaaacgttctcttttgtggtgcttgatgaggaagtggacaagaaagagaacaaaaagtggggttgctg |
45723789 |
T |
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| Q |
111 |
agtattgtatacagaactccccttgtatgaccattgcagtgaggaggaagaataaaaaacttggaggatatttgattactaccaaacgccataaaaactt |
210 |
Q |
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| T |
45723790 |
agtattgtatacagaactccccttgtatgaccattgcagtgaggaggaagaataaaaaacttggaggatatttgattactaccaaacgccataaaaactt |
45723889 |
T |
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| Q |
211 |
ttggcttttggctta-----atatgatacgatacgatatgacttatatcaatgaaattggttatgatgtttgtgggtttgtgtctaatacacataggtaa |
305 |
Q |
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| T |
45723890 |
ttggcttttggcttaatatgatatgatacgatacgatgtgacttatatcaatgaaattggttatgatgtttgtgggtttgtgtctaatacacataggtaa |
45723989 |
T |
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| Q |
306 |
gggtgtatctatctt |
320 |
Q |
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|||||||||||||| |
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| T |
45723990 |
aggtgtatctatctt |
45724004 |
T |
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