View Alignment

This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.

Legend
 Query
 Query hiting target  Query hiting target's complemental strand
 Query's complemental strand hiting target  Query's complemental strand hiting target's complemental strand

Alignment Overview

Query: NF14614_low_37 (Length: 324)

Name: NF14614_low_37
Description: NF14614
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)


[»] NF14614_low_37
NF14614_low_37
[»] chr2 (33 HSPs)
chr2 (1-244)||(37009879-37010135)
chr2 (243-316)||(15228115-15228188)
chr2 (245-314)||(16108443-16108512)
chr2 (243-282)||(13197645-13197684)
chr2 (244-314)||(16805759-16805829)
chr2 (243-282)||(22897389-22897428)
chr2 (243-314)||(34883816-34883887)
chr2 (244-282)||(16845072-16845110)
chr2 (244-314)||(40607701-40607771)
chr2 (245-314)||(1359791-1359860)
chr2 (245-314)||(2438225-2438294)
chr2 (143-188)||(13238929-13238974)
chr2 (245-314)||(27560206-27560275)
chr2 (245-314)||(32120944-32121013)
chr2 (243-282)||(11201681-11201720)
chr2 (244-278)||(1360055-1360089)
chr2 (243-277)||(8841395-8841429)
chr2 (244-282)||(8990203-8990241)
chr2 (244-282)||(11865289-11865327)
chr2 (244-282)||(20252209-20252247)
chr2 (250-316)||(30466110-30466175)
chr2 (244-282)||(34062665-34062703)
chr2 (244-282)||(41450515-41450553)
chr2 (244-281)||(6027617-6027654)
chr2 (245-282)||(7491844-7491881)
chr2 (245-282)||(8716892-8716929)
chr2 (245-282)||(11852185-11852222)
chr2 (143-188)||(17220436-17220481)
chr2 (245-282)||(17408294-17408331)
chr2 (245-282)||(26334845-26334882)
chr2 (245-278)||(29239333-29239366)
chr2 (245-282)||(36131028-36131065)
chr2 (250-282)||(41968202-41968234)
[»] chr7 (29 HSPs)
chr7 (245-316)||(19920563-19920634)
chr7 (244-314)||(34979045-34979115)
chr7 (245-314)||(20074889-20074958)
chr7 (243-314)||(39871581-39871652)
chr7 (244-282)||(29177252-29177290)
chr7 (244-314)||(38858297-38858367)
chr7 (245-282)||(7703820-7703857)
chr7 (245-314)||(21295151-21295220)
chr7 (245-282)||(25247690-25247727)
chr7 (245-314)||(41252329-41252398)
chr7 (250-314)||(17317446-17317510)
chr7 (243-282)||(6387323-6387362)
chr7 (243-282)||(12930316-12930355)
chr7 (243-282)||(32814431-32814470)
chr7 (243-282)||(33858866-33858905)
chr7 (250-316)||(9299102-9299168)
chr7 (244-282)||(29286037-29286075)
chr7 (244-282)||(36698131-36698169)
chr7 (245-282)||(18751982-18752019)
chr7 (245-282)||(19292839-19292876)
chr7 (245-282)||(19845669-19845706)
chr7 (245-282)||(21119557-21119594)
chr7 (245-282)||(26255096-26255133)
chr7 (245-282)||(32872375-32872412)
chr7 (245-282)||(39197718-39197755)
chr7 (245-314)||(40300230-40300299)
chr7 (245-282)||(41026096-41026133)
chr7 (245-282)||(48521029-48521066)
chr7 (243-279)||(22991747-22991783)
[»] chr3 (37 HSPs)
chr3 (243-314)||(7051688-7051759)
chr3 (243-316)||(7181348-7181421)
chr3 (244-312)||(33868447-33868515)
chr3 (243-314)||(22103897-22103968)
chr3 (243-314)||(25149090-25149161)
chr3 (243-314)||(37728711-37728782)
chr3 (243-314)||(44543780-44543851)
chr3 (244-282)||(26221287-26221325)
chr3 (244-282)||(32963105-32963143)
chr3 (244-314)||(35868051-35868121)
chr3 (245-314)||(9499465-9499534)
chr3 (245-282)||(20656310-20656347)
chr3 (245-313)||(14428610-14428678)
chr3 (244-279)||(10044841-10044876)
chr3 (243-282)||(12050392-12050431)
chr3 (243-282)||(28673294-28673333)
chr3 (243-314)||(45745776-45745847)
chr3 (243-282)||(51284062-51284101)
chr3 (143-186)||(53078431-53078474)
chr3 (245-279)||(32978481-32978515)
chr3 (244-282)||(43868102-43868140)
chr3 (245-314)||(4024052-4024121)
chr3 (245-282)||(10220933-10220970)
chr3 (245-282)||(16435236-16435273)
chr3 (245-282)||(21458982-21459019)
chr3 (245-282)||(21756486-21756523)
chr3 (244-281)||(23776495-23776532)
chr3 (245-282)||(26593765-26593802)
chr3 (245-282)||(27646306-27646343)
chr3 (245-282)||(30041017-30041054)
chr3 (245-282)||(33212397-33212434)
chr3 (245-282)||(36005502-36005539)
chr3 (245-282)||(45252773-45252810)
chr3 (245-282)||(46049986-46050023)
chr3 (245-282)||(48887946-48887983)
chr3 (245-282)||(50517522-50517559)
chr3 (245-282)||(53164163-53164200)
[»] chr5 (22 HSPs)
chr5 (244-314)||(15190783-15190853)
chr5 (243-314)||(41641093-41641164)
chr5 (244-314)||(22527691-22527761)
chr5 (244-314)||(40004377-40004447)
chr5 (244-282)||(41384172-41384210)
chr5 (245-314)||(1265949-1266018)
chr5 (245-314)||(9828393-9828462)
chr5 (245-314)||(13660861-13660930)
chr5 (243-282)||(16127257-16127296)
chr5 (243-314)||(24857554-24857625)
chr5 (243-278)||(41383910-41383945)
chr5 (245-279)||(2106831-2106865)
chr5 (244-282)||(3686754-3686792)
chr5 (244-282)||(6673228-6673266)
chr5 (244-282)||(14913647-14913685)
chr5 (244-282)||(22657767-22657805)
chr5 (244-282)||(26894873-26894911)
chr5 (244-314)||(34662203-34662273)
chr5 (244-282)||(35547260-35547298)
chr5 (244-282)||(40643093-40643131)
chr5 (245-281)||(7951562-7951598)
chr5 (243-279)||(9020692-9020728)
[»] chr8 (29 HSPs)
chr8 (245-314)||(36177071-36177140)
chr8 (245-316)||(2944238-2944309)
chr8 (243-314)||(13153926-13153997)
chr8 (243-314)||(34490515-34490586)
chr8 (243-313)||(5774046-5774116)
chr8 (244-314)||(32675725-32675795)
chr8 (244-282)||(40529306-40529344)
chr8 (244-282)||(43654203-43654241)
chr8 (244-282)||(44748463-44748501)
chr8 (245-314)||(51063-51132)
chr8 (245-314)||(14699452-14699521)
chr8 (245-314)||(28192143-28192212)
chr8 (245-314)||(41014504-41014573)
chr8 (245-281)||(44502620-44502656)
chr8 (243-282)||(28572044-28572083)
chr8 (243-282)||(28579637-28579676)
chr8 (243-282)||(34568488-34568527)
chr8 (245-316)||(39029178-39029249)
chr8 (143-186)||(41408271-41408314)
chr8 (244-282)||(8251933-8251971)
chr8 (244-282)||(18754143-18754181)
chr8 (245-282)||(1774342-1774379)
chr8 (245-282)||(7758909-7758946)
chr8 (245-282)||(8951428-8951465)
chr8 (143-188)||(29970881-29970926)
chr8 (245-282)||(33745895-33745932)
chr8 (245-282)||(37023284-37023321)
chr8 (143-175)||(15677739-15677771)
chr8 (243-279)||(35179598-35179634)
[»] chr1 (29 HSPs)
chr1 (244-316)||(4102680-4102752)
chr1 (243-314)||(11741395-11741466)
chr1 (243-314)||(16576060-16576131)
chr1 (243-314)||(37951917-37951988)
chr1 (243-314)||(39497431-39497502)
chr1 (244-314)||(45039411-45039481)
chr1 (244-314)||(52431142-52431212)
chr1 (245-314)||(1039349-1039418)
chr1 (245-314)||(1046255-1046324)
chr1 (245-314)||(15811200-15811269)
chr1 (245-314)||(23541979-23542048)
chr1 (245-314)||(36694854-36694923)
chr1 (245-314)||(36710955-36711024)
chr1 (245-314)||(49907021-49907090)
chr1 (243-278)||(7784258-7784293)
chr1 (243-282)||(18237092-18237131)
chr1 (243-278)||(30289600-30289635)
chr1 (246-313)||(30289831-30289898)
chr1 (243-282)||(50007973-50008012)
chr1 (243-282)||(50246929-50246968)
chr1 (244-282)||(22567065-22567103)
chr1 (244-282)||(50008483-50008521)
chr1 (245-282)||(943637-943674)
chr1 (245-282)||(30290265-30290302)
chr1 (250-279)||(34503240-34503269)
chr1 (245-282)||(39363194-39363231)
chr1 (245-282)||(44649629-44649666)
chr1 (245-282)||(46075867-46075904)
chr1 (250-282)||(45285810-45285842)
[»] chr6 (12 HSPs)
chr6 (243-282)||(25197150-25197189)
chr6 (245-279)||(25024509-25024543)
chr6 (245-314)||(34301800-34301869)
chr6 (243-282)||(7772174-7772213)
chr6 (245-279)||(1730104-1730138)
chr6 (244-282)||(4844399-4844437)
chr6 (244-282)||(9341837-9341875)
chr6 (244-282)||(30248646-30248684)
chr6 (245-282)||(231105-231142)
chr6 (245-278)||(1779784-1779817)
chr6 (245-282)||(8743188-8743225)
chr6 (245-282)||(29036126-29036163)
[»] chr4 (33 HSPs)
chr4 (243-282)||(17610020-17610059)
chr4 (244-314)||(4035824-4035894)
chr4 (248-314)||(4549857-4549923)
chr4 (244-282)||(24754077-24754115)
chr4 (245-314)||(5375525-5375594)
chr4 (245-314)||(5743627-5743696)
chr4 (244-281)||(6462691-6462728)
chr4 (245-282)||(6753525-6753562)
chr4 (245-282)||(15241480-15241517)
chr4 (245-314)||(34273187-34273256)
chr4 (245-314)||(39144404-39144473)
chr4 (245-314)||(47806860-47806929)
chr4 (245-314)||(50352064-50352133)
chr4 (245-314)||(55632227-55632296)
chr4 (245-316)||(26625968-26626039)
chr4 (243-282)||(28298371-28298410)
chr4 (243-314)||(30050052-30050123)
chr4 (243-282)||(45742806-45742845)
chr4 (245-314)||(4455060-4455130)
chr4 (248-282)||(20747173-20747207)
chr4 (245-282)||(9328240-9328277)
chr4 (245-282)||(10588075-10588112)
chr4 (245-282)||(19282081-19282118)
chr4 (245-282)||(30771528-30771565)
chr4 (245-282)||(32032993-32033030)
chr4 (245-282)||(33413518-33413555)
chr4 (245-282)||(44294789-44294826)
chr4 (252-281)||(49490169-49490198)
chr4 (245-282)||(50533884-50533921)
chr4 (245-282)||(52977982-52978019)
chr4 (243-279)||(26889902-26889938)
chr4 (245-281)||(36901111-36901147)
chr4 (250-282)||(54623806-54623838)
[»] scaffold0457 (1 HSPs)
scaffold0457 (245-282)||(4663-4700)
[»] scaffold0019 (1 HSPs)
scaffold0019 (245-314)||(117846-117915)
[»] scaffold0250 (1 HSPs)
scaffold0250 (243-282)||(9426-9465)
[»] scaffold0008 (1 HSPs)
scaffold0008 (243-282)||(259122-259161)
[»] scaffold0604 (1 HSPs)
scaffold0604 (245-316)||(3749-3819)
[»] scaffold0122 (1 HSPs)
scaffold0122 (244-282)||(12064-12102)
[»] scaffold0121 (1 HSPs)
scaffold0121 (244-282)||(24630-24668)
[»] scaffold0029 (1 HSPs)
scaffold0029 (244-282)||(51682-51720)
[»] scaffold0012 (2 HSPs)
scaffold0012 (244-282)||(47639-47677)
scaffold0012 (245-278)||(47904-47937)


Alignment Details
Target: chr2 (Bit Score: 173; Significance: 5e-93; HSPs: 33)
Name: chr2
Description:

Target: chr2; HSP #1
Raw Score: 173; E-Value: 5e-93
Query Start/End: Original strand, 1 - 244
Target Start/End: Original strand, 37009879 - 37010135
Alignment:
Q  1 acaaaataattggtcaccaaaggtattgatttagagaccaaattcacgagcttgttgataaataatacattcctagctaagtcgattttgtgtagaccca 100  Q
    ||||||||||||||||| ||||||||||||||| |||||||||||||||||||||||||||| ||||||||| |||||||||||||||||||||||||||    
T  37009879 acaaaataattggtcacgaaaggtattgatttaaagaccaaattcacgagcttgttgataaaaaatacattcgtagctaagtcgattttgtgtagaccca 37009978  T
Q  101 aaattaaaaatgagtataaatatgattttaagcgtgtgtt-------------gtaattgattttgattgaattaaatttgtaaaattgatgttagttaa 187  Q
    ||||||| ||||||||||||||||||||||||||||||||              ||| ||||||||||||||||||||||||||||||||| ||||||||    
T  37009979 aaattaagaatgagtataaatatgattttaagcgtgtgtttcattctatattattaactgattttgattgaattaaatttgtaaaattgattttagttaa 37010078  T
Q  188 acattaatgtatgatcaaacaatttttgtttgagttggtttacgataaaagagagaa 244  Q
    ||||||||||||||||||||||||||||||||||| |||||| ||||||||||||||    
T  37010079 acattaatgtatgatcaaacaatttttgtttgagtaggtttaggataaaagagagaa 37010135  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #2
Raw Score: 42; E-Value: 0.000000000000008
Query Start/End: Original strand, 243 - 316
Target Start/End: Complemental strand, 15228188 - 15228115
Alignment:
Q  243 aatactccctccgtccctaattataagattcttttgagaannnnnnnngttcctttttataagacccctttgct 316  Q
    ||||||||||||||||||||||||||||| ||||||||||        || |||||||||||||||||||||||    
T  15228188 aatactccctccgtccctaattataagatccttttgagaattttttttgtccctttttataagacccctttgct 15228115  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #3
Raw Score: 42; E-Value: 0.000000000000008
Query Start/End: Original strand, 245 - 314
Target Start/End: Complemental strand, 16108512 - 16108443
Alignment:
Q  245 tactccctccgtccctaattataagattcttttgagaannnnnnnngttcctttttataagacccctttg 314  Q
    ||||||||||||||||||||||||||||||||||||||        || |||||||||||||||||||||    
T  16108512 tactccctccgtccctaattataagattcttttgagaattttttttgtccctttttataagacccctttg 16108443  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #4
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 243 - 282
Target Start/End: Complemental strand, 13197684 - 13197645
Alignment:
Q  243 aatactccctccgtccctaattataagattcttttgagaa 282  Q
    ||||||||||||||||||||||||||||||||||||||||    
T  13197684 aatactccctccgtccctaattataagattcttttgagaa 13197645  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #5
Raw Score: 39; E-Value: 0.0000000000005
Query Start/End: Original strand, 244 - 314
Target Start/End: Complemental strand, 16805829 - 16805759
Alignment:
Q  244 atactccctccgtccctaattataagattcttttgagaannnnnnnngttcctttttataagacccctttg 314  Q
    |||||||||||||||||||||||||||| ||||||||||        || |||||||||||||||||||||    
T  16805829 atactccctccgtccctaattataagatccttttgagaattttttttgtccctttttataagacccctttg 16805759  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #6
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 243 - 282
Target Start/End: Original strand, 22897389 - 22897428
Alignment:
Q  243 aatactccctccgtccctaattataagattcttttgagaa 282  Q
    ||||||||||||||||||||||||||||| ||||||||||    
T  22897389 aatactccctccgtccctaattataagatccttttgagaa 22897428  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #7
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 243 - 314
Target Start/End: Complemental strand, 34883887 - 34883816
Alignment:
Q  243 aatactccctccgtccctaattataagattcttttgagaannnnnnnngttcctttttataagacccctttg 314  Q
    ||||||||||||||||||||||||||||  ||||||||||        || |||||||||||||||||||||    
T  34883887 aatactccctccgtccctaattataagacccttttgagaattttttttgtccctttttataagacccctttg 34883816  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #8
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 244 - 282
Target Start/End: Complemental strand, 16845110 - 16845072
Alignment:
Q  244 atactccctccgtccctaattataagattcttttgagaa 282  Q
    |||||||||||||||||||||||||||| ||||||||||    
T  16845110 atactccctccgtccctaattataagatccttttgagaa 16845072  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #9
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 244 - 314
Target Start/End: Original strand, 40607701 - 40607771
Alignment:
Q  244 atactccctccgtccctaattataagattcttttgagaannnnnnnngttcctttttataagacccctttg 314  Q
    |||||||||||||||||||||||||||  ||||||||||        || |||||||||||||||||||||    
T  40607701 atactccctccgtccctaattataagacccttttgagaaatttttttgtccctttttataagacccctttg 40607771  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #10
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 245 - 314
Target Start/End: Original strand, 1359791 - 1359860
Alignment:
Q  245 tactccctccgtccctaattataagattcttttgagaannnnnnnngttcctttttataagacccctttg 314  Q
    ||||||||||||||||||||||||||| |||| |||||        || |||||||||||||||||||||    
T  1359791 tactccctccgtccctaattataagatcctttggagaattttttttgtccctttttataagacccctttg 1359860  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #11
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 245 - 314
Target Start/End: Original strand, 2438225 - 2438294
Alignment:
Q  245 tactccctccgtccctaattataagattcttttgagaannnnnnnngttcctttttataagacccctttg 314  Q
    ||||||||||||||||||||||||||  ||||||||||        || |||||||||||||||||||||    
T  2438225 tactccctccgtccctaattataagacccttttgagaattttttttgtccctttttataagacccctttg 2438294  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #12
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 143 - 188
Target Start/End: Complemental strand, 13238974 - 13238929
Alignment:
Q  143 aattgattttgattgaattaaatttgtaaaattgatgttagttaaa 188  Q
    ||||||||||||||||||| | |||||||||||||| |||||||||    
T  13238974 aattgattttgattgaattcattttgtaaaattgattttagttaaa 13238929  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #13
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 245 - 314
Target Start/End: Original strand, 27560206 - 27560275
Alignment:
Q  245 tactccctccgtccctaattataagattcttttgagaannnnnnnngttcctttttataagacccctttg 314  Q
    ||||||||||||||||||||||||||  ||||||||||        || |||||||||||||||||||||    
T  27560206 tactccctccgtccctaattataagacccttttgagaaaaatttttgtccctttttataagacccctttg 27560275  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #14
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 245 - 314
Target Start/End: Original strand, 32120944 - 32121013
Alignment:
Q  245 tactccctccgtccctaattataagattcttttgagaannnnnnnngttcctttttataagacccctttg 314  Q
    ||||||||||||||||||||||||||| ||||||| ||        || |||||||||||||||||||||    
T  32120944 tactccctccgtccctaattataagatccttttgaaaaaaaaatttgtccctttttataagacccctttg 32121013  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #15
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 243 - 282
Target Start/End: Original strand, 11201681 - 11201720
Alignment:
Q  243 aatactccctccgtccctaattataagattcttttgagaa 282  Q
    ||||||||||||||||||||||||||||  ||||||||||    
T  11201681 aatactccctccgtccctaattataagacccttttgagaa 11201720  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #16
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 244 - 278
Target Start/End: Complemental strand, 1360089 - 1360055
Alignment:
Q  244 atactccctccgtccctaattataagattcttttg 278  Q
    ||||||||||||||||||||||||||| |||||||    
T  1360089 atactccctccgtccctaattataagactcttttg 1360055  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #17
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 243 - 277
Target Start/End: Original strand, 8841395 - 8841429
Alignment:
Q  243 aatactccctccgtccctaattataagattctttt 277  Q
    |||||||||||||||||||||||||||| ||||||    
T  8841395 aatactccctccgtccctaattataagactctttt 8841429  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #18
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 244 - 282
Target Start/End: Original strand, 8990203 - 8990241
Alignment:
Q  244 atactccctccgtccctaattataagattcttttgagaa 282  Q
    ||||||||||||||||||||||||||||  |||||||||    
T  8990203 atactccctccgtccctaattataagatctttttgagaa 8990241  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #19
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 244 - 282
Target Start/End: Complemental strand, 11865327 - 11865289
Alignment:
Q  244 atactccctccgtccctaattataagattcttttgagaa 282  Q
    ||||| ||||||||||||||||||||| |||||||||||    
T  11865327 atactacctccgtccctaattataagactcttttgagaa 11865289  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #20
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 244 - 282
Target Start/End: Original strand, 20252209 - 20252247
Alignment:
Q  244 atactccctccgtccctaattataagattcttttgagaa 282  Q
    |||||||||||||||||||||||||||  ||||||||||    
T  20252209 atactccctccgtccctaattataagacccttttgagaa 20252247  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #21
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 250 - 316
Target Start/End: Original strand, 30466110 - 30466175
Alignment:
Q  250 cctccgtccctaattataagattcttttgagaannnnnnnngttcctttttataagacccctttgct 316  Q
    |||||||||||||||||||||| ||||||||||         |||||||||||||||||||||||||    
T  30466110 cctccgtccctaattataagatccttttgagaatttttttt-ttcctttttataagacccctttgct 30466175  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #22
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 244 - 282
Target Start/End: Complemental strand, 34062703 - 34062665
Alignment:
Q  244 atactccctccgtccctaattataagattcttttgagaa 282  Q
    |||||||||||||||||||||||||||  ||||||||||    
T  34062703 atactccctccgtccctaattataagacccttttgagaa 34062665  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #23
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 244 - 282
Target Start/End: Original strand, 41450515 - 41450553
Alignment:
Q  244 atactccctccgtccctaattataagattcttttgagaa 282  Q
    |||||||||||||||||||||||||||  ||||||||||    
T  41450515 atactccctccgtccctaattataagacccttttgagaa 41450553  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #24
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 244 - 281
Target Start/End: Original strand, 6027617 - 6027654
Alignment:
Q  244 atactccctccgtccctaattataagattcttttgaga 281  Q
    ||||| |||||||||||||||||||||| |||||||||    
T  6027617 atactacctccgtccctaattataagatccttttgaga 6027654  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #25
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 245 - 282
Target Start/End: Original strand, 7491844 - 7491881
Alignment:
Q  245 tactccctccgtccctaattataagattcttttgagaa 282  Q
    ||||||||||||||||||||||||||  ||||||||||    
T  7491844 tactccctccgtccctaattataagacccttttgagaa 7491881  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #26
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 245 - 282
Target Start/End: Complemental strand, 8716929 - 8716892
Alignment:
Q  245 tactccctccgtccctaattataagattcttttgagaa 282  Q
    ||||||||||||||||||||||||||  ||||||||||    
T  8716929 tactccctccgtccctaattataagacccttttgagaa 8716892  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #27
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 245 - 282
Target Start/End: Complemental strand, 11852222 - 11852185
Alignment:
Q  245 tactccctccgtccctaattataagattcttttgagaa 282  Q
    |||| |||||||||||||||||||||| ||||||||||    
T  11852222 tactacctccgtccctaattataagatccttttgagaa 11852185  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #28
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 143 - 188
Target Start/End: Complemental strand, 17220481 - 17220436
Alignment:
Q  143 aattgattttgattgaattaaatttgtaaaattgatgttagttaaa 188  Q
    ||||||||||||||||||||  |||||||||||||  |||||||||    
T  17220481 aattgattttgattgaattagttttgtaaaattgactttagttaaa 17220436  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #29
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 245 - 282
Target Start/End: Complemental strand, 17408331 - 17408294
Alignment:
Q  245 tactccctccgtccctaattataagattcttttgagaa 282  Q
    ||||||||||||||||||||||||||  ||||||||||    
T  17408331 tactccctccgtccctaattataagacccttttgagaa 17408294  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #30
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 245 - 282
Target Start/End: Complemental strand, 26334882 - 26334845
Alignment:
Q  245 tactccctccgtccctaattataagattcttttgagaa 282  Q
    |||| ||||||||||||||||||||| |||||||||||    
T  26334882 tactacctccgtccctaattataagactcttttgagaa 26334845  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #31
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 245 - 278
Target Start/End: Original strand, 29239333 - 29239366
Alignment:
Q  245 tactccctccgtccctaattataagattcttttg 278  Q
    |||||||||||||||||||||||||| |||||||    
T  29239333 tactccctccgtccctaattataagactcttttg 29239366  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #32
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 245 - 282
Target Start/End: Complemental strand, 36131065 - 36131028
Alignment:
Q  245 tactccctccgtccctaattataagattcttttgagaa 282  Q
    ||||||||||||||||||||||||||  ||||||||||    
T  36131065 tactccctccgtccctaattataagacccttttgagaa 36131028  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #33
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 250 - 282
Target Start/End: Complemental strand, 41968234 - 41968202
Alignment:
Q  250 cctccgtccctaattataagattcttttgagaa 282  Q
    |||||||||||||||||||||| ||||||||||    
T  41968234 cctccgtccctaattataagatccttttgagaa 41968202  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7 (Bit Score: 40; Significance: 0.0000000000001; HSPs: 29)
Name: chr7
Description:

Target: chr7; HSP #1
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 245 - 316
Target Start/End: Original strand, 19920563 - 19920634
Alignment:
Q  245 tactccctccgtccctaattataagattcttttgagaannnnnnnngttcctttttataagacccctttgct 316  Q
    ||||||||||||||||||||||||||  ||||||||||        ||||||||||||||||||||||||||    
T  19920563 tactccctccgtccctaattataagacccttttgagaattttttttgttcctttttataagacccctttgct 19920634  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #2
Raw Score: 39; E-Value: 0.0000000000005
Query Start/End: Original strand, 244 - 314
Target Start/End: Complemental strand, 34979115 - 34979045
Alignment:
Q  244 atactccctccgtccctaattataagattcttttgagaannnnnnnngttcctttttataagacccctttg 314  Q
    ||||||||||||||||||||||||||| |||||||||||        || |||||||||||||||||||||    
T  34979115 atactccctccgtccctaattataagactcttttgagaattttttttgtccctttttataagacccctttg 34979045  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #3
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 245 - 314
Target Start/End: Original strand, 20074889 - 20074958
Alignment:
Q  245 tactccctccgtccctaattataagattcttttgagaannnnnnnngttcctttttataagacccctttg 314  Q
    |||||||||||||||||||||||| |||||||||||||        || |||||||||||||||||||||    
T  20074889 tactccctccgtccctaattataatattcttttgagaatatttgttgtccctttttataagacccctttg 20074958  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #4
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 243 - 314
Target Start/End: Complemental strand, 39871652 - 39871581
Alignment:
Q  243 aatactccctccgtccctaattataagattcttttgagaannnnnnnngttcctttttataagacccctttg 314  Q
    ||||||||||||||||||||||||||||  ||||||||||        || |||||||||||||||||||||    
T  39871652 aatactccctccgtccctaattataagacccttttgagaaatttttttgtccctttttataagacccctttg 39871581  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #5
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 244 - 282
Target Start/End: Complemental strand, 29177290 - 29177252
Alignment:
Q  244 atactccctccgtccctaattataagattcttttgagaa 282  Q
    |||||||||||||||||||||||||||| ||||||||||    
T  29177290 atactccctccgtccctaattataagatccttttgagaa 29177252  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #6
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 244 - 314
Target Start/End: Original strand, 38858297 - 38858367
Alignment:
Q  244 atactccctccgtccctaattataagattcttttgagaannnnnnnngttcctttttataagacccctttg 314  Q
    |||||||||||||||||||||||||||  ||||||||||        || |||||||||||||||||||||    
T  38858297 atactccctccgtccctaattataagacccttttgagaattttttttgtccctttttataagacccctttg 38858367  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #7
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 245 - 282
Target Start/End: Complemental strand, 7703857 - 7703820
Alignment:
Q  245 tactccctccgtccctaattataagattcttttgagaa 282  Q
    |||||||||||||| |||||||||||||||||||||||    
T  7703857 tactccctccgtccttaattataagattcttttgagaa 7703820  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #8
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 245 - 314
Target Start/End: Original strand, 21295151 - 21295220
Alignment:
Q  245 tactccctccgtccctaattataagattcttttgagaannnnnnnngttcctttttataagacccctttg 314  Q
    ||||||||||||||||||||||||||  ||||||||||        || |||||||||||||||||||||    
T  21295151 tactccctccgtccctaattataagacccttttgagaattttttttgtccctttttataagacccctttg 21295220  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #9
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 245 - 282
Target Start/End: Complemental strand, 25247727 - 25247690
Alignment:
Q  245 tactccctccgtccctaattataagattcttttgagaa 282  Q
    |||||||||||||||||||||||||| |||||||||||    
T  25247727 tactccctccgtccctaattataagactcttttgagaa 25247690  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #10
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 245 - 314
Target Start/End: Complemental strand, 41252398 - 41252329
Alignment:
Q  245 tactccctccgtccctaattataagattcttttgagaannnnnnnngttcctttttataagacccctttg 314  Q
    ||||||||||||||||||||||||||  ||||||||||        || |||||||||||||||||||||    
T  41252398 tactccctccgtccctaattataagacccttttgagaattttttttgtccctttttataagacccctttg 41252329  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #11
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 250 - 314
Target Start/End: Original strand, 17317446 - 17317510
Alignment:
Q  250 cctccgtccctaattataagattcttttgagaannnnnnnngttcctttttataagacccctttg 314  Q
    |||||||||||||||||||||| ||||||||||        || |||||||||||||||||||||    
T  17317446 cctccgtccctaattataagatccttttgagaattttttttgtccctttttataagacccctttg 17317510  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #12
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 243 - 282
Target Start/End: Original strand, 6387323 - 6387362
Alignment:
Q  243 aatactccctccgtccctaattataagattcttttgagaa 282  Q
    ||||||||||||||| |||||||||||| |||||||||||    
T  6387323 aatactccctccgtctctaattataagactcttttgagaa 6387362  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #13
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 243 - 282
Target Start/End: Original strand, 12930316 - 12930355
Alignment:
Q  243 aatactccctccgtccctaattataagattcttttgagaa 282  Q
    |||||| ||||||||||||||||||||| |||||||||||    
T  12930316 aatactacctccgtccctaattataagactcttttgagaa 12930355  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #14
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 243 - 282
Target Start/End: Original strand, 32814431 - 32814470
Alignment:
Q  243 aatactccctccgtccctaattataagattcttttgagaa 282  Q
    ||||||||||||||||||||||||||||  ||||||||||    
T  32814431 aatactccctccgtccctaattataagacccttttgagaa 32814470  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #15
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 243 - 282
Target Start/End: Complemental strand, 33858905 - 33858866
Alignment:
Q  243 aatactccctccgtccctaattataagattcttttgagaa 282  Q
    ||||||||||||||||||||||||||||  ||||||||||    
T  33858905 aatactccctccgtccctaattataagacccttttgagaa 33858866  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #16
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 250 - 316
Target Start/End: Original strand, 9299102 - 9299168
Alignment:
Q  250 cctccgtccctaattataagattcttttgagaannnnnnnngttcctttttataagacccctttgct 316  Q
    |||||||||||||||||||||| ||||||||||        || |||||||||||| ||||||||||    
T  9299102 cctccgtccctaattataagatacttttgagaattttttttgtccctttttataagtcccctttgct 9299168  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #17
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 244 - 282
Target Start/End: Complemental strand, 29286075 - 29286037
Alignment:
Q  244 atactccctccgtccctaattataagattcttttgagaa 282  Q
    |||||||||||||||||||||||||||  ||||||||||    
T  29286075 atactccctccgtccctaattataagacccttttgagaa 29286037  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #18
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 244 - 282
Target Start/End: Complemental strand, 36698169 - 36698131
Alignment:
Q  244 atactccctccgtccctaattataagattcttttgagaa 282  Q
    |||||||||||||||||||||||||||  ||||||||||    
T  36698169 atactccctccgtccctaattataagacccttttgagaa 36698131  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #19
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 245 - 282
Target Start/End: Complemental strand, 18752019 - 18751982
Alignment:
Q  245 tactccctccgtccctaattataagattcttttgagaa 282  Q
    |||| ||||||||||||||||||||| |||||||||||    
T  18752019 tactacctccgtccctaattataagactcttttgagaa 18751982  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #20
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 245 - 282
Target Start/End: Original strand, 19292839 - 19292876
Alignment:
Q  245 tactccctccgtccctaattataagattcttttgagaa 282  Q
    |||| |||||||||||||||||||||| ||||||||||    
T  19292839 tactacctccgtccctaattataagatccttttgagaa 19292876  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #21
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 245 - 282
Target Start/End: Complemental strand, 19845706 - 19845669
Alignment:
Q  245 tactccctccgtccctaattataagattcttttgagaa 282  Q
    |||| |||||||||||||||||||||| ||||||||||    
T  19845706 tactacctccgtccctaattataagatccttttgagaa 19845669  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #22
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 245 - 282
Target Start/End: Original strand, 21119557 - 21119594
Alignment:
Q  245 tactccctccgtccctaattataagattcttttgagaa 282  Q
    |||| |||||||||||||||||||||| ||||||||||    
T  21119557 tactacctccgtccctaattataagatccttttgagaa 21119594  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #23
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 245 - 282
Target Start/End: Original strand, 26255096 - 26255133
Alignment:
Q  245 tactccctccgtccctaattataagattcttttgagaa 282  Q
    ||||||||||||||||||||||||||  ||||||||||    
T  26255096 tactccctccgtccctaattataagacccttttgagaa 26255133  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #24
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 245 - 282
Target Start/End: Complemental strand, 32872412 - 32872375
Alignment:
Q  245 tactccctccgtccctaattataagattcttttgagaa 282  Q
    ||||||||||||||||||||||||||  ||||||||||    
T  32872412 tactccctccgtccctaattataagacccttttgagaa 32872375  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #25
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 245 - 282
Target Start/End: Original strand, 39197718 - 39197755
Alignment:
Q  245 tactccctccgtccctaattataagattcttttgagaa 282  Q
    ||||||||||||||||||||||||||  ||||||||||    
T  39197718 tactccctccgtccctaattataagacccttttgagaa 39197755  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #26
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 245 - 314
Target Start/End: Original strand, 40300230 - 40300299
Alignment:
Q  245 tactccctccgtccctaattataagattcttttgagaannnnnnnngttcctttttataagacccctttg 314  Q
    ||||||||||||||||||||||||||  |||||||||         || |||||||||||||||||||||    
T  40300230 tactccctccgtccctaattataagacccttttgagatttttttttgtccctttttataagacccctttg 40300299  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #27
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 245 - 282
Target Start/End: Complemental strand, 41026133 - 41026096
Alignment:
Q  245 tactccctccgtccctaattataagattcttttgagaa 282  Q
    ||||||||||||||||||||||||||  ||||||||||    
T  41026133 tactccctccgtccctaattataagacccttttgagaa 41026096  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #28
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 245 - 282
Target Start/End: Original strand, 48521029 - 48521066
Alignment:
Q  245 tactccctccgtccctaattataagattcttttgagaa 282  Q
    ||||||||||||||||||||||||||  ||||||||||    
T  48521029 tactccctccgtccctaattataagacccttttgagaa 48521066  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #29
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 243 - 279
Target Start/End: Complemental strand, 22991783 - 22991747
Alignment:
Q  243 aatactccctccgtccctaattataagattcttttga 279  Q
    |||||| |||||||||||||||||||||| |||||||    
T  22991783 aatactacctccgtccctaattataagatccttttga 22991747  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3 (Bit Score: 40; Significance: 0.0000000000001; HSPs: 37)
Name: chr3
Description:

Target: chr3; HSP #1
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 243 - 314
Target Start/End: Complemental strand, 7051759 - 7051688
Alignment:
Q  243 aatactccctccgtccctaattataagattcttttgagaannnnnnnngttcctttttataagacccctttg 314  Q
    ||||||||||||||||||||||||||||| ||||||||||        || |||||||||||||||||||||    
T  7051759 aatactccctccgtccctaattataagatccttttgagaattttttttgtccctttttataagacccctttg 7051688  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #2
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 243 - 316
Target Start/End: Original strand, 7181348 - 7181421
Alignment:
Q  243 aatactccctccgtccctaattataagattcttttgagaannnnnnnngttcctttttataagacccctttgct 316  Q
    ||||||||||||||||||||||||||||  ||||||||||        || |||||||||||||||||||||||    
T  7181348 aatactccctccgtccctaattataagacccttttgagaaatttttttgtccctttttataagacccctttgct 7181421  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #3
Raw Score: 37; E-Value: 0.000000000007
Query Start/End: Original strand, 244 - 312
Target Start/End: Original strand, 33868447 - 33868515
Alignment:
Q  244 atactccctccgtccctaattataagattcttttgagaannnnnnnngttcctttttataagacccctt 312  Q
    |||||||||||||||||||||||||||| ||||||||||        || |||||||||||||||||||    
T  33868447 atactccctccgtccctaattataagatccttttgagaattttttttgtccctttttataagacccctt 33868515  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #4
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 243 - 314
Target Start/End: Complemental strand, 22103968 - 22103897
Alignment:
Q  243 aatactccctccgtccctaattataagattcttttgagaannnnnnnngttcctttttataagacccctttg 314  Q
    ||||||||||||||||||||||||||||  ||||||||||        || |||||||||||||||||||||    
T  22103968 aatactccctccgtccctaattataagacccttttgagaattttttttgtccctttttataagacccctttg 22103897  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #5
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 243 - 314
Target Start/End: Complemental strand, 25149161 - 25149090
Alignment:
Q  243 aatactccctccgtccctaattataagattcttttgagaannnnnnnngttcctttttataagacccctttg 314  Q
    ||||||||||||||||||||||||||||  ||||||||||        || |||||||||||||||||||||    
T  25149161 aatactccctccgtccctaattataagacccttttgagaattttttttgtccctttttataagacccctttg 25149090  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #6
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 243 - 314
Target Start/End: Original strand, 37728711 - 37728782
Alignment:
Q  243 aatactccctccgtccctaattataagattcttttgagaannnnnnnngttcctttttataagacccctttg 314  Q
    ||||||||||||||||||||||||||||  ||||||||||        || |||||||||||||||||||||    
T  37728711 aatactccctccgtccctaattataagacccttttgagaatatttgttgtccctttttataagacccctttg 37728782  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #7
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 243 - 314
Target Start/End: Original strand, 44543780 - 44543851
Alignment:
Q  243 aatactccctccgtccctaattataagattcttttgagaannnnnnnngttcctttttataagacccctttg 314  Q
    ||||||||||||||||||||||||||||  ||||||||||        || |||||||||||||||||||||    
T  44543780 aatactccctccgtccctaattataagacccttttgagaatttcttttgtccctttttataagacccctttg 44543851  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #8
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 244 - 282
Target Start/End: Original strand, 26221287 - 26221325
Alignment:
Q  244 atactccctccgtccctaattataagattcttttgagaa 282  Q
    ||||||||||||||||||||||||||| |||||||||||    
T  26221287 atactccctccgtccctaattataagactcttttgagaa 26221325  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #9
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 244 - 282
Target Start/End: Complemental strand, 32963143 - 32963105
Alignment:
Q  244 atactccctccgtccctaattataagattcttttgagaa 282  Q
    |||||||||||||||||||||||||||| ||||||||||    
T  32963143 atactccctccgtccctaattataagatccttttgagaa 32963105  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #10
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 244 - 314
Target Start/End: Complemental strand, 35868121 - 35868051
Alignment:
Q  244 atactccctccgtccctaattataagattcttttgagaannnnnnnngttcctttttataagacccctttg 314  Q
    |||||||||||||||||||||||||||  ||||||||||        || |||||||||||||||||||||    
T  35868121 atactccctccgtccctaattataagacccttttgagaattttttttgtccctttttataagacccctttg 35868051  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #11
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 245 - 314
Target Start/End: Complemental strand, 9499534 - 9499465
Alignment:
Q  245 tactccctccgtccctaattataagattcttttgagaannnnnnnngttcctttttataagacccctttg 314  Q
    ||||||||||||||||||||||||||  ||||||||||        || |||||||||||||||||||||    
T  9499534 tactccctccgtccctaattataagacccttttgagaattttttttgtccctttttataagacccctttg 9499465  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #12
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 245 - 282
Target Start/End: Complemental strand, 20656347 - 20656310
Alignment:
Q  245 tactccctccgtccctaattataagattcttttgagaa 282  Q
    |||||||||||| |||||||||||||||||||||||||    
T  20656347 tactccctccgttcctaattataagattcttttgagaa 20656310  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #13
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 245 - 313
Target Start/End: Original strand, 14428610 - 14428678
Alignment:
Q  245 tactccctccgtccctaattataagattcttttgagaannnnnnnngttcctttttataagaccccttt 313  Q
    ||||||||||||||||||||||||||  ||||||||||        || ||||||||||||||||||||    
T  14428610 tactccctccgtccctaattataagacccttttgagaaatttttttgtccctttttataagaccccttt 14428678  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #14
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 244 - 279
Target Start/End: Original strand, 10044841 - 10044876
Alignment:
Q  244 atactccctccgtccctaattataagattcttttga 279  Q
    |||||||||||||||||||||||||||| |||||||    
T  10044841 atactccctccgtccctaattataagatccttttga 10044876  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #15
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 243 - 282
Target Start/End: Complemental strand, 12050431 - 12050392
Alignment:
Q  243 aatactccctccgtccctaattataagattcttttgagaa 282  Q
    ||||||||||||||||||||||||||||  ||||||||||    
T  12050431 aatactccctccgtccctaattataagacccttttgagaa 12050392  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #16
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 243 - 282
Target Start/End: Complemental strand, 28673333 - 28673294
Alignment:
Q  243 aatactccctccgtccctaattataagattcttttgagaa 282  Q
    |||||| |||||||||||||||||||||| ||||||||||    
T  28673333 aatactacctccgtccctaattataagatccttttgagaa 28673294  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #17
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 243 - 314
Target Start/End: Original strand, 45745776 - 45745847
Alignment:
Q  243 aatactccctccgtccctaattataagattcttttgagaannnnnnnngttcctttttataagacccctttg 314  Q
    ||||||||||||||||| |||||||||| |||||||| ||        || |||||||||||||||||||||    
T  45745776 aatactccctccgtcccaaattataagactcttttgaaaaaaaaaattgtccctttttataagacccctttg 45745847  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #18
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 243 - 282
Target Start/End: Complemental strand, 51284101 - 51284062
Alignment:
Q  243 aatactccctccgtccctaattataagattcttttgagaa 282  Q
    ||||||||||||||||||||||||||||  ||||||||||    
T  51284101 aatactccctccgtccctaattataagacccttttgagaa 51284062  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #19
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 143 - 186
Target Start/End: Complemental strand, 53078474 - 53078431
Alignment:
Q  143 aattgattttgattgaattaaatttgtaaaattgatgttagtta 186  Q
    ||||||||||||||||||||| |||||| ||||||| |||||||    
T  53078474 aattgattttgattgaattaattttgtagaattgattttagtta 53078431  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #20
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 245 - 279
Target Start/End: Original strand, 32978481 - 32978515
Alignment:
Q  245 tactccctccgtccctaattataagattcttttga 279  Q
    ||||||||||||||||||||||||||| |||||||    
T  32978481 tactccctccgtccctaattataagatccttttga 32978515  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #21
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 244 - 282
Target Start/End: Original strand, 43868102 - 43868140
Alignment:
Q  244 atactccctccgtccctaattataagattcttttgagaa 282  Q
    |||||||||||||||||||||||||||  ||||||||||    
T  43868102 atactccctccgtccctaattataagacccttttgagaa 43868140  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #22
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 245 - 314
Target Start/End: Original strand, 4024052 - 4024121
Alignment:
Q  245 tactccctccgtccctaattataagattcttttgagaannnnnnnngttcctttttataagacccctttg 314  Q
    ||||||||||||||||||||||||||  |||||||||         || |||||||||||||||||||||    
T  4024052 tactccctccgtccctaattataagacccttttgagatttttttttgtccctttttataagacccctttg 4024121  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #23
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 245 - 282
Target Start/End: Original strand, 10220933 - 10220970
Alignment:
Q  245 tactccctccgtccctaattataagattcttttgagaa 282  Q
    ||||||||||||||||||||||||||  ||||||||||    
T  10220933 tactccctccgtccctaattataagacccttttgagaa 10220970  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #24
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 245 - 282
Target Start/End: Complemental strand, 16435273 - 16435236
Alignment:
Q  245 tactccctccgtccctaattataagattcttttgagaa 282  Q
    ||||||||||||| ||||||||||||| ||||||||||    
T  16435273 tactccctccgtctctaattataagatccttttgagaa 16435236  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #25
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 245 - 282
Target Start/End: Original strand, 21458982 - 21459019
Alignment:
Q  245 tactccctccgtccctaattataagattcttttgagaa 282  Q
    |||| |||||||||||||||||||||| ||||||||||    
T  21458982 tactacctccgtccctaattataagatccttttgagaa 21459019  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #26
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 245 - 282
Target Start/End: Original strand, 21756486 - 21756523
Alignment:
Q  245 tactccctccgtccctaattataagattcttttgagaa 282  Q
    ||||||||||||||||||||||||||  ||||||||||    
T  21756486 tactccctccgtccctaattataagacccttttgagaa 21756523  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #27
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 244 - 281
Target Start/End: Complemental strand, 23776532 - 23776495
Alignment:
Q  244 atactccctccgtccctaattataagattcttttgaga 281  Q
    ||||| ||||||||||||||||||||||| ||||||||    
T  23776532 atactacctccgtccctaattataagatttttttgaga 23776495  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #28
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 245 - 282
Target Start/End: Complemental strand, 26593802 - 26593765
Alignment:
Q  245 tactccctccgtccctaattataagattcttttgagaa 282  Q
    ||||||||||||||||||||||||||  ||||||||||    
T  26593802 tactccctccgtccctaattataagacccttttgagaa 26593765  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #29
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 245 - 282
Target Start/End: Complemental strand, 27646343 - 27646306
Alignment:
Q  245 tactccctccgtccctaattataagattcttttgagaa 282  Q
    |||| |||||||||||||||||||||| ||||||||||    
T  27646343 tactacctccgtccctaattataagatccttttgagaa 27646306  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #30
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 245 - 282
Target Start/End: Complemental strand, 30041054 - 30041017
Alignment:
Q  245 tactccctccgtccctaattataagattcttttgagaa 282  Q
    |||||||||||| ||||||||||||| |||||||||||    
T  30041054 tactccctccgttcctaattataagactcttttgagaa 30041017  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #31
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 245 - 282
Target Start/End: Original strand, 33212397 - 33212434
Alignment:
Q  245 tactccctccgtccctaattataagattcttttgagaa 282  Q
    |||| |||||||||||||||||||||| ||||||||||    
T  33212397 tactacctccgtccctaattataagatccttttgagaa 33212434  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #32
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 245 - 282
Target Start/End: Original strand, 36005502 - 36005539
Alignment:
Q  245 tactccctccgtccctaattataagattcttttgagaa 282  Q
    |||| ||||||||||||||||||||||| |||||||||    
T  36005502 tacttcctccgtccctaattataagatttttttgagaa 36005539  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #33
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 245 - 282
Target Start/End: Original strand, 45252773 - 45252810
Alignment:
Q  245 tactccctccgtccctaattataagattcttttgagaa 282  Q
    ||||||||||||||||||||||||||  ||||||||||    
T  45252773 tactccctccgtccctaattataagacccttttgagaa 45252810  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #34
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 245 - 282
Target Start/End: Complemental strand, 46050023 - 46049986
Alignment:
Q  245 tactccctccgtccctaattataagattcttttgagaa 282  Q
    ||||||||||||||||||||||||||  ||||||||||    
T  46050023 tactccctccgtccctaattataagacccttttgagaa 46049986  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #35
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 245 - 282
Target Start/End: Complemental strand, 48887983 - 48887946
Alignment:
Q  245 tactccctccgtccctaattataagattcttttgagaa 282  Q
    |||| ||||||||| |||||||||||||||||||||||    
T  48887983 tactacctccgtccataattataagattcttttgagaa 48887946  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #36
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 245 - 282
Target Start/End: Complemental strand, 50517559 - 50517522
Alignment:
Q  245 tactccctccgtccctaattataagattcttttgagaa 282  Q
    |||| |||||||||||||||||||||| ||||||||||    
T  50517559 tactacctccgtccctaattataagatccttttgagaa 50517522  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #37
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 245 - 282
Target Start/End: Original strand, 53164163 - 53164200
Alignment:
Q  245 tactccctccgtccctaattataagattcttttgagaa 282  Q
    |||| |||||||||||||||||||||| ||||||||||    
T  53164163 tactacctccgtccctaattataagatccttttgagaa 53164200  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5 (Bit Score: 39; Significance: 0.0000000000005; HSPs: 22)
Name: chr5
Description:

Target: chr5; HSP #1
Raw Score: 39; E-Value: 0.0000000000005
Query Start/End: Original strand, 244 - 314
Target Start/End: Complemental strand, 15190853 - 15190783
Alignment:
Q  244 atactccctccgtccctaattataagattcttttgagaannnnnnnngttcctttttataagacccctttg 314  Q
    ||||||||||||||||||||||||||| |||||||||||        || |||||||||||||||||||||    
T  15190853 atactccctccgtccctaattataagactcttttgagaattttttttgtccctttttataagacccctttg 15190783  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #2
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 243 - 314
Target Start/End: Original strand, 41641093 - 41641164
Alignment:
Q  243 aatactccctccgtccctaattataagattcttttgagaannnnnnnngttcctttttataagacccctttg 314  Q
    |||||||||||||||||||||||||||||  |||||||||        || |||||||||||||||||||||    
T  41641093 aatactccctccgtccctaattataagatcattttgagaattttttttgtccctttttataagacccctttg 41641164  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #3
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 244 - 314
Target Start/End: Original strand, 22527691 - 22527761
Alignment:
Q  244 atactccctccgtccctaattataagattcttttgagaannnnnnnngttcctttttataagacccctttg 314  Q
    |||||||||||||||||||||||||||  ||||||||||        || |||||||||||||||||||||    
T  22527691 atactccctccgtccctaattataagacccttttgagaattttttttgtccctttttataagacccctttg 22527761  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #4
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 244 - 314
Target Start/End: Complemental strand, 40004447 - 40004377
Alignment:
Q  244 atactccctccgtccctaattataagattcttttgagaannnnnnnngttcctttttataagacccctttg 314  Q
    |||||||||||||||||||||||||||  ||||||||||        || |||||||||||||||||||||    
T  40004447 atactccctccgtccctaattataagacccttttgagaattttttttgtccctttttataagacccctttg 40004377  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #5
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 244 - 282
Target Start/End: Complemental strand, 41384210 - 41384172
Alignment:
Q  244 atactccctccgtccctaattataagattcttttgagaa 282  Q
    |||||||||||||||||||||||||||| ||||||||||    
T  41384210 atactccctccgtccctaattataagatccttttgagaa 41384172  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #6
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 245 - 314
Target Start/End: Original strand, 1265949 - 1266018
Alignment:
Q  245 tactccctccgtccctaattataagattcttttgagaannnnnnnngttcctttttataagacccctttg 314  Q
    ||||||||||||||||||||||||||  ||||||||||        || |||||||||||||||||||||    
T  1265949 tactccctccgtccctaattataagacccttttgagaattttttttgtccctttttataagacccctttg 1266018  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #7
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 245 - 314
Target Start/End: Original strand, 9828393 - 9828462
Alignment:
Q  245 tactccctccgtccctaattataagattcttttgagaannnnnnnngttcctttttataagacccctttg 314  Q
    ||||||||||||||||||||||||||  ||||||||||        || |||||||||||||||||||||    
T  9828393 tactccctccgtccctaattataagacccttttgagaattttttttgtccctttttataagacccctttg 9828462  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #8
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 245 - 314
Target Start/End: Original strand, 13660861 - 13660930
Alignment:
Q  245 tactccctccgtccctaattataagattcttttgagaannnnnnnngttcctttttataagacccctttg 314  Q
    ||||||||||||| ||||||||||||| ||||||||||        || |||||||||||||||||||||    
T  13660861 tactccctccgtctctaattataagatccttttgagaattttttttgtccctttttataagacccctttg 13660930  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #9
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 243 - 282
Target Start/End: Original strand, 16127257 - 16127296
Alignment:
Q  243 aatactccctccgtccctaattataagattcttttgagaa 282  Q
    ||||||||||||||||||||||||||||  ||||||||||    
T  16127257 aatactccctccgtccctaattataagacccttttgagaa 16127296  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #10
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 243 - 314
Target Start/End: Original strand, 24857554 - 24857625
Alignment:
Q  243 aatactccctccgtccctaattataagattcttttgagaannnnnnnngttcctttttataagacccctttg 314  Q
    |||||| ||||||||||||||||||||| |||||||| ||        || |||||||||||||||||||||    
T  24857554 aatactacctccgtccctaattataagactcttttgaaaaaataatttgtccctttttataagacccctttg 24857625  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #11
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 243 - 278
Target Start/End: Original strand, 41383910 - 41383945
Alignment:
Q  243 aatactccctccgtccctaattataagattcttttg 278  Q
    ||||||||||||||||||||||||||||| ||||||    
T  41383910 aatactccctccgtccctaattataagatccttttg 41383945  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #12
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 245 - 279
Target Start/End: Original strand, 2106831 - 2106865
Alignment:
Q  245 tactccctccgtccctaattataagattcttttga 279  Q
    |||||||||||||| ||||||||||||||||||||    
T  2106831 tactccctccgtccataattataagattcttttga 2106865  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #13
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 244 - 282
Target Start/End: Complemental strand, 3686792 - 3686754
Alignment:
Q  244 atactccctccgtccctaattataagattcttttgagaa 282  Q
    ||||||| ||||||||||||||||||| |||||||||||    
T  3686792 atactccttccgtccctaattataagactcttttgagaa 3686754  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #14
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 244 - 282
Target Start/End: Complemental strand, 6673266 - 6673228
Alignment:
Q  244 atactccctccgtccctaattataagattcttttgagaa 282  Q
    |||||||||||||||||||||||||||  ||||||||||    
T  6673266 atactccctccgtccctaattataagacccttttgagaa 6673228  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #15
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 244 - 282
Target Start/End: Original strand, 14913647 - 14913685
Alignment:
Q  244 atactccctccgtccctaattataagattcttttgagaa 282  Q
    |||||||||||||||||||||||||||  ||||||||||    
T  14913647 atactccctccgtccctaattataagacccttttgagaa 14913685  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #16
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 244 - 282
Target Start/End: Original strand, 22657767 - 22657805
Alignment:
Q  244 atactccctccgtccctaattataagattcttttgagaa 282  Q
    ||||| |||||||||||||||||||||| ||||||||||    
T  22657767 atactacctccgtccctaattataagatccttttgagaa 22657805  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #17
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 244 - 282
Target Start/End: Complemental strand, 26894911 - 26894873
Alignment:
Q  244 atactccctccgtccctaattataagattcttttgagaa 282  Q
    |||||||||||||||||||||||||||  ||||||||||    
T  26894911 atactccctccgtccctaattataagacccttttgagaa 26894873  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #18
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 244 - 314
Target Start/End: Original strand, 34662203 - 34662273
Alignment:
Q  244 atactccctccgtccctaattataagattcttttgagaannnnnnnngttcctttttataagacccctttg 314  Q
    |||||||||||||||||||||||||||  |||||||||         || |||||||||||||||||||||    
T  34662203 atactccctccgtccctaattataagacccttttgagagttttttttgtccctttttataagacccctttg 34662273  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #19
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 244 - 282
Target Start/End: Original strand, 35547260 - 35547298
Alignment:
Q  244 atactccctccgtccctaattataagattcttttgagaa 282  Q
    ||||| ||||||||||||||||||||||| |||||||||    
T  35547260 atactacctccgtccctaattataagatttttttgagaa 35547298  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #20
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 244 - 282
Target Start/End: Original strand, 40643093 - 40643131
Alignment:
Q  244 atactccctccgtccctaattataagattcttttgagaa 282  Q
    ||||| |||||||||||||||||||||| ||||||||||    
T  40643093 atactacctccgtccctaattataagatccttttgagaa 40643131  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #21
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 245 - 281
Target Start/End: Original strand, 7951562 - 7951598
Alignment:
Q  245 tactccctccgtccctaattataagattcttttgaga 281  Q
    ||||||||||||||||||||||||||  |||||||||    
T  7951562 tactccctccgtccctaattataagacccttttgaga 7951598  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #22
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 243 - 279
Target Start/End: Original strand, 9020692 - 9020728
Alignment:
Q  243 aatactccctccgtccctaattataagattcttttga 279  Q
    ||||||||||||||||||||||||||||  |||||||    
T  9020692 aatactccctccgtccctaattataagacccttttga 9020728  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8 (Bit Score: 38; Significance: 0.000000000002; HSPs: 29)
Name: chr8
Description:

Target: chr8; HSP #1
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 245 - 314
Target Start/End: Complemental strand, 36177140 - 36177071
Alignment:
Q  245 tactccctccgtccctaattataagattcttttgagaannnnnnnngttcctttttataagacccctttg 314  Q
    |||||||||||||||||||||||||| |||||||||||        || |||||||||||||||||||||    
T  36177140 tactccctccgtccctaattataagactcttttgagaattttttttgtccctttttataagacccctttg 36177071  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #2
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 245 - 316
Target Start/End: Complemental strand, 2944309 - 2944238
Alignment:
Q  245 tactccctccgtccctaattataagattcttttgagaannnnnnnngttcctttttataagacccctttgct 316  Q
    ||||||||||||||||||||||||||  ||||||||||        || |||||||||||||||||||||||    
T  2944309 tactccctccgtccctaattataagacccttttgagaattttttttgtccctttttataagacccctttgct 2944238  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #3
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 243 - 314
Target Start/End: Original strand, 13153926 - 13153997
Alignment:
Q  243 aatactccctccgtccctaattataagattcttttgagaannnnnnnngttcctttttataagacccctttg 314  Q
    ||||||||||||||||||||||||||||  ||||||||||        || |||||||||||||||||||||    
T  13153926 aatactccctccgtccctaattataagacccttttgagaattttttttgtccctttttataagacccctttg 13153997  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #4
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 243 - 314
Target Start/End: Original strand, 34490515 - 34490586
Alignment:
Q  243 aatactccctccgtccctaattataagattcttttgagaannnnnnnngttcctttttataagacccctttg 314  Q
    |||||||||||||||||||||||||||||  |||||||||        || |||||||||||||||||||||    
T  34490515 aatactccctccgtccctaattataagatctttttgagaattttttttgtccctttttataagacccctttg 34490586  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #5
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 243 - 313
Target Start/End: Original strand, 5774046 - 5774116
Alignment:
Q  243 aatactccctccgtccctaattataagattcttttgagaannnnnnnngttcctttttataagaccccttt 313  Q
    |||||| ||||||||||||||||||||| |||||||||||        || ||||||||||||||||||||    
T  5774046 aatactacctccgtccctaattataagactcttttgagaattttttttgtccctttttataagaccccttt 5774116  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #6
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 244 - 314
Target Start/End: Complemental strand, 32675795 - 32675725
Alignment:
Q  244 atactccctccgtccctaattataagattcttttgagaannnnnnnngttcctttttataagacccctttg 314  Q
    |||||||||||||||||||||||||||  ||||||||||        || |||||||||||||||||||||    
T  32675795 atactccctccgtccctaattataagacccttttgagaaaaaaatttgtccctttttataagacccctttg 32675725  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #7
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 244 - 282
Target Start/End: Original strand, 40529306 - 40529344
Alignment:
Q  244 atactccctccgtccctaattataagattcttttgagaa 282  Q
    |||||||||||||||||||||||||||| ||||||||||    
T  40529306 atactccctccgtccctaattataagatccttttgagaa 40529344  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #8
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 244 - 282
Target Start/End: Complemental strand, 43654241 - 43654203
Alignment:
Q  244 atactccctccgtccctaattataagattcttttgagaa 282  Q
    ||||||||||||||||||||||||||| |||||||||||    
T  43654241 atactccctccgtccctaattataagactcttttgagaa 43654203  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #9
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 244 - 282
Target Start/End: Complemental strand, 44748501 - 44748463
Alignment:
Q  244 atactccctccgtccctaattataagattcttttgagaa 282  Q
    ||||| |||||||||||||||||||||||||||||||||    
T  44748501 atactacctccgtccctaattataagattcttttgagaa 44748463  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #10
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 245 - 314
Target Start/End: Complemental strand, 51132 - 51063
Alignment:
Q  245 tactccctccgtccctaattataagattcttttgagaannnnnnnngttcctttttataagacccctttg 314  Q
    ||||||||||||||||||||||||||  ||||||||||        || |||||||||||||||||||||    
T  51132 tactccctccgtccctaattataagacccttttgagaattttttttgtccctttttataagacccctttg 51063  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #11
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 245 - 314
Target Start/End: Original strand, 14699452 - 14699521
Alignment:
Q  245 tactccctccgtccctaattataagattcttttgagaannnnnnnngttcctttttataagacccctttg 314  Q
    |||| |||||||||||||||||||||| ||||||||||        || |||||||||||||||||||||    
T  14699452 tacttcctccgtccctaattataagatccttttgagaattttttttgtccctttttataagacccctttg 14699521  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #12
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 245 - 314
Target Start/End: Complemental strand, 28192212 - 28192143
Alignment:
Q  245 tactccctccgtccctaattataagattcttttgagaannnnnnnngttcctttttataagacccctttg 314  Q
    ||||||||||||||||||||||||||  ||||||||||        || |||||||||||||||||||||    
T  28192212 tactccctccgtccctaattataagacccttttgagaattttttttgtccctttttataagacccctttg 28192143  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #13
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 245 - 314
Target Start/End: Original strand, 41014504 - 41014573
Alignment:
Q  245 tactccctccgtccctaattataagattcttttgagaannnnnnnngttcctttttataagacccctttg 314  Q
    |||||||||||||||||||||||||||  ||||||||         ||||||||||||||||||||||||    
T  41014504 tactccctccgtccctaattataagatctttttgagatttttttttgttcctttttataagacccctttg 41014573  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #14
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 245 - 281
Target Start/End: Original strand, 44502620 - 44502656
Alignment:
Q  245 tactccctccgtccctaattataagattcttttgaga 281  Q
    ||||||||||||||||||||||||||| |||||||||    
T  44502620 tactccctccgtccctaattataagatccttttgaga 44502656  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #15
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 243 - 282
Target Start/End: Original strand, 28572044 - 28572083
Alignment:
Q  243 aatactccctccgtccctaattataagattcttttgagaa 282  Q
    ||||||||||||||||||||||||||||  ||||||||||    
T  28572044 aatactccctccgtccctaattataagacccttttgagaa 28572083  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #16
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 243 - 282
Target Start/End: Original strand, 28579637 - 28579676
Alignment:
Q  243 aatactccctccgtccctaattataagattcttttgagaa 282  Q
    ||||||||||||||||||||||||||||  ||||||||||    
T  28579637 aatactccctccgtccctaattataagacccttttgagaa 28579676  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #17
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 243 - 282
Target Start/End: Original strand, 34568488 - 34568527
Alignment:
Q  243 aatactccctccgtccctaattataagattcttttgagaa 282  Q
    ||||||||||||||||||||||||||||  ||||||||||    
T  34568488 aatactccctccgtccctaattataagacccttttgagaa 34568527  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #18
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 245 - 316
Target Start/End: Original strand, 39029178 - 39029249
Alignment:
Q  245 tactccctccgtccctaattataagattcttttgagaannnnnnnngttcctttttataagacccctttgct 316  Q
    ||||||||||||||||||||||||||  ||||||||||        || | |||||||||||||||||||||    
T  39029178 tactccctccgtccctaattataagacccttttgagaaaattttttgtccttttttataagacccctttgct 39029249  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #19
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 143 - 186
Target Start/End: Complemental strand, 41408314 - 41408271
Alignment:
Q  143 aattgattttgattgaattaaatttgtaaaattgatgttagtta 186  Q
    ||||||||||||||||||||| |||||| ||||||| |||||||    
T  41408314 aattgattttgattgaattaattttgtagaattgattttagtta 41408271  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #20
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 244 - 282
Target Start/End: Complemental strand, 8251971 - 8251933
Alignment:
Q  244 atactccctccgtccctaattataagattcttttgagaa 282  Q
    |||||||||||||||||||||||||||  ||||||||||    
T  8251971 atactccctccgtccctaattataagacccttttgagaa 8251933  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #21
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 244 - 282
Target Start/End: Original strand, 18754143 - 18754181
Alignment:
Q  244 atactccctccgtccctaattataagattcttttgagaa 282  Q
    |||||||||||||||||||||||||||  ||||||||||    
T  18754143 atactccctccgtccctaattataagacccttttgagaa 18754181  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #22
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 245 - 282
Target Start/End: Original strand, 1774342 - 1774379
Alignment:
Q  245 tactccctccgtccctaattataagattcttttgagaa 282  Q
    ||||||||||||||||||||||||||  ||||||||||    
T  1774342 tactccctccgtccctaattataagacccttttgagaa 1774379  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #23
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 245 - 282
Target Start/End: Complemental strand, 7758946 - 7758909
Alignment:
Q  245 tactccctccgtccctaattataagattcttttgagaa 282  Q
    ||||||||||||||||||||||||||  ||||||||||    
T  7758946 tactccctccgtccctaattataagacacttttgagaa 7758909  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #24
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 245 - 282
Target Start/End: Complemental strand, 8951465 - 8951428
Alignment:
Q  245 tactccctccgtccctaattataagattcttttgagaa 282  Q
    ||||||||||||||||||||||||||  ||||||||||    
T  8951465 tactccctccgtccctaattataagacccttttgagaa 8951428  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #25
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 143 - 188
Target Start/End: Complemental strand, 29970926 - 29970881
Alignment:
Q  143 aattgattttgattgaattaaatttgtaaaattgatgttagttaaa 188  Q
    ||||||||||||| ||||| |||||||| ||||||| |||||||||    
T  29970926 aattgattttgatagaattgaatttgtataattgattttagttaaa 29970881  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #26
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 245 - 282
Target Start/End: Complemental strand, 33745932 - 33745895
Alignment:
Q  245 tactccctccgtccctaattataagattcttttgagaa 282  Q
    |||||||||||| |||||||||||||| ||||||||||    
T  33745932 tactccctccgttcctaattataagatccttttgagaa 33745895  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #27
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 245 - 282
Target Start/End: Complemental strand, 37023321 - 37023284
Alignment:
Q  245 tactccctccgtccctaattataagattcttttgagaa 282  Q
    |||| ||||||||||||||||||||| |||||||||||    
T  37023321 tactgcctccgtccctaattataagactcttttgagaa 37023284  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #28
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 143 - 175
Target Start/End: Original strand, 15677739 - 15677771
Alignment:
Q  143 aattgattttgattgaattaaatttgtaaaatt 175  Q
    ||||||||||||||||||||||||| |||||||    
T  15677739 aattgattttgattgaattaaatttataaaatt 15677771  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #29
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 243 - 279
Target Start/End: Original strand, 35179598 - 35179634
Alignment:
Q  243 aatactccctccgtccctaattataagattcttttga 279  Q
    |||||| ||||||||||||||||||||| ||||||||    
T  35179598 aatactacctccgtccctaattataagactcttttga 35179634  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1 (Bit Score: 37; Significance: 0.000000000007; HSPs: 29)
Name: chr1
Description:

Target: chr1; HSP #1
Raw Score: 37; E-Value: 0.000000000007
Query Start/End: Original strand, 244 - 316
Target Start/End: Complemental strand, 4102752 - 4102680
Alignment:
Q  244 atactccctccgtccctaattataagattcttttgagaannnnnnnngttcctttttataagacccctttgct 316  Q
    |||||||||||||||||||||||||||  ||||||||||        || |||||||||||||||||||||||    
T  4102752 atactccctccgtccctaattataagacccttttgagaattttttttgtccctttttataagacccctttgct 4102680  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #2
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 243 - 314
Target Start/End: Original strand, 11741395 - 11741466
Alignment:
Q  243 aatactccctccgtccctaattataagattcttttgagaannnnnnnngttcctttttataagacccctttg 314  Q
    ||||||||||||||||||||||||||||  ||||||||||        || |||||||||||||||||||||    
T  11741395 aatactccctccgtccctaattataagacccttttgagaattttttttgtccctttttataagacccctttg 11741466  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #3
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 243 - 314
Target Start/End: Complemental strand, 16576131 - 16576060
Alignment:
Q  243 aatactccctccgtccctaattataagattcttttgagaannnnnnnngttcctttttataagacccctttg 314  Q
    |||||||||||||||||||||||||||| |||||||| ||        || |||||||||||||||||||||    
T  16576131 aatactccctccgtccctaattataagactcttttgataattttttttgtccctttttataagacccctttg 16576060  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #4
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 243 - 314
Target Start/End: Complemental strand, 37951988 - 37951917
Alignment:
Q  243 aatactccctccgtccctaattataagattcttttgagaannnnnnnngttcctttttataagacccctttg 314  Q
    ||||||||||||||||||||||||||||  ||||||||||        || |||||||||||||||||||||    
T  37951988 aatactccctccgtccctaattataagacccttttgagaattttttttgtccctttttataagacccctttg 37951917  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #5
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 243 - 314
Target Start/End: Original strand, 39497431 - 39497502
Alignment:
Q  243 aatactccctccgtccctaattataagattcttttgagaannnnnnnngttcctttttataagacccctttg 314  Q
    ||||||||||||||||||||||||||||  ||||||||||        || |||||||||||||||||||||    
T  39497431 aatactccctccgtccctaattataagacccttttgagaattttttttgtccctttttataagacccctttg 39497502  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #6
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 244 - 314
Target Start/End: Original strand, 45039411 - 45039481
Alignment:
Q  244 atactccctccgtccctaattataagattcttttgagaannnnnnnngttcctttttataagacccctttg 314  Q
    |||||||||||||||||||||||||||  ||||||||||        || |||||||||||||||||||||    
T  45039411 atactccctccgtccctaattataagacccttttgagaattttttttgtccctttttataagacccctttg 45039481  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #7
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 244 - 314
Target Start/End: Complemental strand, 52431212 - 52431142
Alignment:
Q  244 atactccctccgtccctaattataagattcttttgagaannnnnnnngttcctttttataagacccctttg 314  Q
    |||||||||||||||||||||||||||  ||||||||||        || |||||||||||||||||||||    
T  52431212 atactccctccgtccctaattataagacccttttgagaattttttttgtccctttttataagacccctttg 52431142  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #8
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 245 - 314
Target Start/End: Complemental strand, 1039418 - 1039349
Alignment:
Q  245 tactccctccgtccctaattataagattcttttgagaannnnnnnngttcctttttataagacccctttg 314  Q
    ||||||||||||||||||||||||||  ||||||||||        || |||||||||||||||||||||    
T  1039418 tactccctccgtccctaattataagacccttttgagaattttttttgtccctttttataagacccctttg 1039349  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #9
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 245 - 314
Target Start/End: Complemental strand, 1046324 - 1046255
Alignment:
Q  245 tactccctccgtccctaattataagattcttttgagaannnnnnnngttcctttttataagacccctttg 314  Q
    ||||||||||||||||||||||||||  ||||||||||        || |||||||||||||||||||||    
T  1046324 tactccctccgtccctaattataagacccttttgagaattttttttgtccctttttataagacccctttg 1046255  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #10
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 245 - 314
Target Start/End: Complemental strand, 15811269 - 15811200
Alignment:
Q  245 tactccctccgtccctaattataagattcttttgagaannnnnnnngttcctttttataagacccctttg 314  Q
    ||||||||||||||||||||||||||  ||||||||||        || |||||||||||||||||||||    
T  15811269 tactccctccgtccctaattataagacccttttgagaattttttttgtccctttttataagacccctttg 15811200  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #11
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 245 - 314
Target Start/End: Original strand, 23541979 - 23542048
Alignment:
Q  245 tactccctccgtccctaattataagattcttttgagaannnnnnnngttcctttttataagacccctttg 314  Q
    ||||||||||||||||||||||||||  ||||||||||        || |||||||||||||||||||||    
T  23541979 tactccctccgtccctaattataagacccttttgagaattttttttgtccctttttataagacccctttg 23542048  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #12
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 245 - 314
Target Start/End: Original strand, 36694854 - 36694923
Alignment:
Q  245 tactccctccgtccctaattataagattcttttgagaannnnnnnngttcctttttataagacccctttg 314  Q
    ||||||||||||||||||||||||||  ||||||||||        || |||||||||||||||||||||    
T  36694854 tactccctccgtccctaattataagacccttttgagaattttttttgtccctttttataagacccctttg 36694923  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #13
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 245 - 314
Target Start/End: Original strand, 36710955 - 36711024
Alignment:
Q  245 tactccctccgtccctaattataagattcttttgagaannnnnnnngttcctttttataagacccctttg 314  Q
    ||||||||||||||||||||||||||  ||||||||||        || |||||||||||||||||||||    
T  36710955 tactccctccgtccctaattataagacccttttgagaattttttttgtccctttttataagacccctttg 36711024  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #14
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 245 - 314
Target Start/End: Original strand, 49907021 - 49907090
Alignment:
Q  245 tactccctccgtccctaattataagattcttttgagaannnnnnnngttcctttttataagacccctttg 314  Q
    ||||||||||||||||||||||||||  ||||||||||        || |||||||||||||||||||||    
T  49907021 tactccctccgtccctaattataagacccttttgagaattttttttgtccctttttataagacccctttg 49907090  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #15
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 243 - 278
Target Start/End: Complemental strand, 7784293 - 7784258
Alignment:
Q  243 aatactccctccgtccctaattataagattcttttg 278  Q
    |||||||||||||||||||||||||||| |||||||    
T  7784293 aatactccctccgtccctaattataagactcttttg 7784258  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #16
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 243 - 282
Target Start/End: Original strand, 18237092 - 18237131
Alignment:
Q  243 aatactccctccgtccctaattataagattcttttgagaa 282  Q
    |||||| ||||||||||||||||||||| |||||||||||    
T  18237092 aatactacctccgtccctaattataagactcttttgagaa 18237131  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #17
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 243 - 278
Target Start/End: Original strand, 30289600 - 30289635
Alignment:
Q  243 aatactccctccgtccctaattataagattcttttg 278  Q
    |||||||||||||||||||||||||||| |||||||    
T  30289600 aatactccctccgtccctaattataagactcttttg 30289635  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #18
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 246 - 313
Target Start/End: Complemental strand, 30289898 - 30289831
Alignment:
Q  246 actccctccgtccctaattataagattcttttgagaannnnnnnngttcctttttataagaccccttt 313  Q
    |||||||||||||||||||||||||  ||||||||||        || ||||||||||||||||||||    
T  30289898 actccctccgtccctaattataagacccttttgagaattttttttgtccctttttataagaccccttt 30289831  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #19
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 243 - 282
Target Start/End: Original strand, 50007973 - 50008012
Alignment:
Q  243 aatactccctccgtccctaattataagattcttttgagaa 282  Q
    ||||||||||| |||||||||||||||| |||||||||||    
T  50007973 aatactccctctgtccctaattataagactcttttgagaa 50008012  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #20
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 243 - 282
Target Start/End: Complemental strand, 50246968 - 50246929
Alignment:
Q  243 aatactccctccgtccctaattataagattcttttgagaa 282  Q
    |||||||||||||||| |||||||||||| ||||||||||    
T  50246968 aatactccctccgtccgtaattataagatccttttgagaa 50246929  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #21
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 244 - 282
Target Start/End: Original strand, 22567065 - 22567103
Alignment:
Q  244 atactccctccgtccctaattataagattcttttgagaa 282  Q
    ||||| |||||||||||||||||||||| ||||||||||    
T  22567065 atactacctccgtccctaattataagatccttttgagaa 22567103  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #22
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 244 - 282
Target Start/End: Complemental strand, 50008521 - 50008483
Alignment:
Q  244 atactccctccgtccctaattataagattcttttgagaa 282  Q
    ||||||||||||||||||||||||||||  |||||||||    
T  50008521 atactccctccgtccctaattataagatcattttgagaa 50008483  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #23
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 245 - 282
Target Start/End: Complemental strand, 943674 - 943637
Alignment:
Q  245 tactccctccgtccctaattataagattcttttgagaa 282  Q
    ||||||||||||||||||||||||||  ||||||||||    
T  943674 tactccctccgtccctaattataagacccttttgagaa 943637  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #24
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 245 - 282
Target Start/End: Original strand, 30290265 - 30290302
Alignment:
Q  245 tactccctccgtccctaattataagattcttttgagaa 282  Q
    ||||||||||||||||||||||||||  ||||||||||    
T  30290265 tactccctccgtccctaattataagacccttttgagaa 30290302  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #25
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 250 - 279
Target Start/End: Original strand, 34503240 - 34503269
Alignment:
Q  250 cctccgtccctaattataagattcttttga 279  Q
    ||||||||||||||||||||||||||||||    
T  34503240 cctccgtccctaattataagattcttttga 34503269  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #26
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 245 - 282
Target Start/End: Complemental strand, 39363231 - 39363194
Alignment:
Q  245 tactccctccgtccctaattataagattcttttgagaa 282  Q
    ||||||||||||||||||||||||||  ||||||||||    
T  39363231 tactccctccgtccctaattataagacccttttgagaa 39363194  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #27
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 245 - 282
Target Start/End: Original strand, 44649629 - 44649666
Alignment:
Q  245 tactccctccgtccctaattataagattcttttgagaa 282  Q
    ||||||||||||||||||||||||||  ||||||||||    
T  44649629 tactccctccgtccctaattataagacccttttgagaa 44649666  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #28
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 245 - 282
Target Start/End: Complemental strand, 46075904 - 46075867
Alignment:
Q  245 tactccctccgtccctaattataagattcttttgagaa 282  Q
    ||||||||||||||||||||||||||  ||||||||||    
T  46075904 tactccctccgtccctaattataagacccttttgagaa 46075867  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #29
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 250 - 282
Target Start/End: Complemental strand, 45285842 - 45285810
Alignment:
Q  250 cctccgtccctaattataagattcttttgagaa 282  Q
    ||||||||||||||||||||| |||||||||||    
T  45285842 cctccgtccctaattataagactcttttgagaa 45285810  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6 (Bit Score: 36; Significance: 0.00000000003; HSPs: 12)
Name: chr6
Description:

Target: chr6; HSP #1
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 243 - 282
Target Start/End: Original strand, 25197150 - 25197189
Alignment:
Q  243 aatactccctccgtccctaattataagattcttttgagaa 282  Q
    ||||||||||||||||||||||||||||| ||||||||||    
T  25197150 aatactccctccgtccctaattataagatccttttgagaa 25197189  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #2
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 245 - 279
Target Start/End: Complemental strand, 25024543 - 25024509
Alignment:
Q  245 tactccctccgtccctaattataagattcttttga 279  Q
    |||||||||||||||||||||||||||||||||||    
T  25024543 tactccctccgtccctaattataagattcttttga 25024509  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #3
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 245 - 314
Target Start/End: Complemental strand, 34301869 - 34301800
Alignment:
Q  245 tactccctccgtccctaattataagattcttttgagaannnnnnnngttcctttttataagacccctttg 314  Q
    ||||||||||||||||||||||||||  ||||||||||        || |||||||||||||||||||||    
T  34301869 tactccctccgtccctaattataagacccttttgagaattttttttgtccctttttataagacccctttg 34301800  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #4
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 243 - 282
Target Start/End: Original strand, 7772174 - 7772213
Alignment:
Q  243 aatactccctccgtccctaattataagattcttttgagaa 282  Q
    |||||| ||||||||||||||||||||| |||||||||||    
T  7772174 aatactacctccgtccctaattataagactcttttgagaa 7772213  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #5
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 245 - 279
Target Start/End: Complemental strand, 1730138 - 1730104
Alignment:
Q  245 tactccctccgtccctaattataagattcttttga 279  Q
    ||||||||||||||||||||||||||| |||||||    
T  1730138 tactccctccgtccctaattataagatccttttga 1730104  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #6
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 244 - 282
Target Start/End: Original strand, 4844399 - 4844437
Alignment:
Q  244 atactccctccgtccctaattataagattcttttgagaa 282  Q
    |||||||||||||||||||||||||||  ||||||||||    
T  4844399 atactccctccgtccctaattataagacccttttgagaa 4844437  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #7
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 244 - 282
Target Start/End: Original strand, 9341837 - 9341875
Alignment:
Q  244 atactccctccgtccctaattataagattcttttgagaa 282  Q
    ||||| |||||||||||||||||||||| ||||||||||    
T  9341837 atactacctccgtccctaattataagatccttttgagaa 9341875  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #8
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 244 - 282
Target Start/End: Original strand, 30248646 - 30248684
Alignment:
Q  244 atactccctccgtccctaattataagattcttttgagaa 282  Q
    |||||||||||||||||||||||||||  ||||||||||    
T  30248646 atactccctccgtccctaattataagacccttttgagaa 30248684  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #9
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 245 - 282
Target Start/End: Complemental strand, 231142 - 231105
Alignment:
Q  245 tactccctccgtccctaattataagattcttttgagaa 282  Q
    ||||||||||||||||||||||||||  ||||||||||    
T  231142 tactccctccgtccctaattataagacccttttgagaa 231105  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #10
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 245 - 278
Target Start/End: Original strand, 1779784 - 1779817
Alignment:
Q  245 tactccctccgtccctaattataagattcttttg 278  Q
    ||||||||||||||||||||||||||| ||||||    
T  1779784 tactccctccgtccctaattataagatccttttg 1779817  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #11
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 245 - 282
Target Start/End: Original strand, 8743188 - 8743225
Alignment:
Q  245 tactccctccgtccctaattataagattcttttgagaa 282  Q
    ||||||||||||||||||||||||||  ||||||||||    
T  8743188 tactccctccgtccctaattataagacccttttgagaa 8743225  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #12
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 245 - 282
Target Start/End: Original strand, 29036126 - 29036163
Alignment:
Q  245 tactccctccgtccctaattataagattcttttgagaa 282  Q
    |||||||||||| |||||||||||||| ||||||||||    
T  29036126 tactccctccgttcctaattataagatccttttgagaa 29036163  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4 (Bit Score: 36; Significance: 0.00000000003; HSPs: 33)
Name: chr4
Description:

Target: chr4; HSP #1
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 243 - 282
Target Start/End: Complemental strand, 17610059 - 17610020
Alignment:
Q  243 aatactccctccgtccctaattataagattcttttgagaa 282  Q
    ||||||||||||||||||||||||||||| ||||||||||    
T  17610059 aatactccctccgtccctaattataagatccttttgagaa 17610020  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #2
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 244 - 314
Target Start/End: Original strand, 4035824 - 4035894
Alignment:
Q  244 atactccctccgtccctaattataagattcttttgagaannnnnnnngttcctttttataagacccctttg 314  Q
    |||||||||||||||||||||||||||  ||||||||||        || |||||||||||||||||||||    
T  4035824 atactccctccgtccctaattataagacccttttgagaattttttttgtccctttttataagacccctttg 4035894  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #3
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 248 - 314
Target Start/End: Complemental strand, 4549923 - 4549857
Alignment:
Q  248 tccctccgtccctaattataagattcttttgagaannnnnnnngttcctttttataagacccctttg 314  Q
    ||||||||||||||||||||||| |||||||||||        ||||||||||||||||||| ||||    
T  4549923 tccctccgtccctaattataagactcttttgagaattttttttgttcctttttataagacccttttg 4549857  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #4
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 244 - 282
Target Start/End: Original strand, 24754077 - 24754115
Alignment:
Q  244 atactccctccgtccctaattataagattcttttgagaa 282  Q
    |||||||||||||||||||||||||||| ||||||||||    
T  24754077 atactccctccgtccctaattataagatccttttgagaa 24754115  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #5
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 245 - 314
Target Start/End: Complemental strand, 5375594 - 5375525
Alignment:
Q  245 tactccctccgtccctaattataagattcttttgagaannnnnnnngttcctttttataagacccctttg 314  Q
    ||||||||||||||||||||||||||  ||||||||||        || |||||||||||||||||||||    
T  5375594 tactccctccgtccctaattataagacccttttgagaattttttttgtccctttttataagacccctttg 5375525  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #6
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 245 - 314
Target Start/End: Complemental strand, 5743696 - 5743627
Alignment:
Q  245 tactccctccgtccctaattataagattcttttgagaannnnnnnngttcctttttataagacccctttg 314  Q
    ||||||||||||||||||||||||||  ||||||||||        || |||||||||||||||||||||    
T  5743696 tactccctccgtccctaattataagacccttttgagaaaaaaatttgtccctttttataagacccctttg 5743627  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #7
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 244 - 281
Target Start/End: Complemental strand, 6462728 - 6462691
Alignment:
Q  244 atactccctccgtccctaattataagattcttttgaga 281  Q
    ||||| ||||||||||||||||||||||||||||||||    
T  6462728 atactacctccgtccctaattataagattcttttgaga 6462691  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #8
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 245 - 282
Target Start/End: Original strand, 6753525 - 6753562
Alignment:
Q  245 tactccctccgtccctaattataagattcttttgagaa 282  Q
    ||||||||||||||||||||||||||| ||||||||||    
T  6753525 tactccctccgtccctaattataagatccttttgagaa 6753562  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #9
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 245 - 282
Target Start/End: Original strand, 15241480 - 15241517
Alignment:
Q  245 tactccctccgtccctaattataagattcttttgagaa 282  Q
    |||||||||||||||||||||||||| |||||||||||    
T  15241480 tactccctccgtccctaattataagactcttttgagaa 15241517  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #10
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 245 - 314
Target Start/End: Complemental strand, 34273256 - 34273187
Alignment:
Q  245 tactccctccgtccctaattataagattcttttgagaannnnnnnngttcctttttataagacccctttg 314  Q
    ||||||||||||||||||||||||||  ||||||||||        || |||||||||||||||||||||    
T  34273256 tactccctccgtccctaattataagacccttttgagaattttttttgtccctttttataagacccctttg 34273187  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #11
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 245 - 314
Target Start/End: Original strand, 39144404 - 39144473
Alignment:
Q  245 tactccctccgtccctaattataagattcttttgagaannnnnnnngttcctttttataagacccctttg 314  Q
    ||||||||||||||||||||||||||| ||||| ||||        ||||||||||||||||| ||||||    
T  39144404 tactccctccgtccctaattataagatccttttaagaattttttttgttcctttttataagactcctttg 39144473  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #12
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 245 - 314
Target Start/End: Original strand, 47806860 - 47806929
Alignment:
Q  245 tactccctccgtccctaattataagattcttttgagaannnnnnnngttcctttttataagacccctttg 314  Q
    ||||||||||||||||||||||||||  ||||||||||        || |||||||||||||||||||||    
T  47806860 tactccctccgtccctaattataagacccttttgagaattttttttgtccctttttataagacccctttg 47806929  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #13
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 245 - 314
Target Start/End: Original strand, 50352064 - 50352133
Alignment:
Q  245 tactccctccgtccctaattataagattcttttgagaannnnnnnngttcctttttataagacccctttg 314  Q
    ||||||||||||| ||||||||||||| ||||||||||        || |||||||||||||||||||||    
T  50352064 tactccctccgtctctaattataagatccttttgagaattttttttgtccctttttataagacccctttg 50352133  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #14
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 245 - 314
Target Start/End: Complemental strand, 55632296 - 55632227
Alignment:
Q  245 tactccctccgtccctaattataagattcttttgagaannnnnnnngttcctttttataagacccctttg 314  Q
    ||||||||||||| ||||||||||||| ||||||||||        || |||||||||||||||||||||    
T  55632296 tactccctccgtctctaattataagatccttttgagaattttttttgtccctttttataagacccctttg 55632227  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #15
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 245 - 316
Target Start/End: Complemental strand, 26626039 - 26625968
Alignment:
Q  245 tactccctccgtccctaattataagattcttttgagaannnnnnnngttcctttttataagacccctttgct 316  Q
    ||||||||||||||||||||||||||  |||||||||         || |||||||||||||||||||||||    
T  26626039 tactccctccgtccctaattataagacccttttgagatttttttttgtccctttttataagacccctttgct 26625968  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #16
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 243 - 282
Target Start/End: Complemental strand, 28298410 - 28298371
Alignment:
Q  243 aatactccctccgtccctaattataagattcttttgagaa 282  Q
    |||||| |||||||||||||||||||||| ||||||||||    
T  28298410 aatactacctccgtccctaattataagatccttttgagaa 28298371  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #17
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 243 - 314
Target Start/End: Complemental strand, 30050123 - 30050052
Alignment:
Q  243 aatactccctccgtccctaattataagattcttttgagaannnnnnnngttcctttttataagacccctttg 314  Q
    |||||| ||||||||||||||||||||| |||||||| ||        || |||||||||||||||||||||    
T  30050123 aatactacctccgtccctaattataagactcttttgaaaaaaaatttggtccctttttataagacccctttg 30050052  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #18
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 243 - 282
Target Start/End: Complemental strand, 45742845 - 45742806
Alignment:
Q  243 aatactccctccgtccctaattataagattcttttgagaa 282  Q
    ||||||||||||||||||||||||||||  ||||||||||    
T  45742845 aatactccctccgtccctaattataagacccttttgagaa 45742806  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #19
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 245 - 314
Target Start/End: Original strand, 4455060 - 4455130
Alignment:
Q  245 tactccctccgtccctaattataagattcttttgagaannnnnnnngtt-cctttttataagacccctttg 314  Q
    |||||| ||||||||||||||||||| |||||||||||        ||| |||||||||||||||||||||    
T  4455060 tactccatccgtccctaattataagactcttttgagaattttttttgttccctttttataagacccctttg 4455130  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #20
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 248 - 282
Target Start/End: Original strand, 20747173 - 20747207
Alignment:
Q  248 tccctccgtccctaattataagattcttttgagaa 282  Q
    |||||||||||||||||||||||||| ||||||||    
T  20747173 tccctccgtccctaattataagattcctttgagaa 20747207  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #21
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 245 - 282
Target Start/End: Complemental strand, 9328277 - 9328240
Alignment:
Q  245 tactccctccgtccctaattataagattcttttgagaa 282  Q
    ||||||||||||||||||||||||||  ||||||||||    
T  9328277 tactccctccgtccctaattataagacccttttgagaa 9328240  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #22
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 245 - 282
Target Start/End: Original strand, 10588075 - 10588112
Alignment:
Q  245 tactccctccgtccctaattataagattcttttgagaa 282  Q
    |||||||||||||||||||||||| || ||||||||||    
T  10588075 tactccctccgtccctaattataacatccttttgagaa 10588112  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #23
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 245 - 282
Target Start/End: Complemental strand, 19282118 - 19282081
Alignment:
Q  245 tactccctccgtccctaattataagattcttttgagaa 282  Q
    |||||||| |||||||||||||||||| ||||||||||    
T  19282118 tactccctacgtccctaattataagatccttttgagaa 19282081  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #24
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 245 - 282
Target Start/End: Original strand, 30771528 - 30771565
Alignment:
Q  245 tactccctccgtccctaattataagattcttttgagaa 282  Q
    ||||||||||||||||||||||||||  ||||||||||    
T  30771528 tactccctccgtccctaattataagacccttttgagaa 30771565  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #25
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 245 - 282
Target Start/End: Complemental strand, 32033030 - 32032993
Alignment:
Q  245 tactccctccgtccctaattataagattcttttgagaa 282  Q
    ||||||||||||||||||||||||||  ||||||||||    
T  32033030 tactccctccgtccctaattataagacccttttgagaa 32032993  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #26
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 245 - 282
Target Start/End: Original strand, 33413518 - 33413555
Alignment:
Q  245 tactccctccgtccctaattataagattcttttgagaa 282  Q
    ||||||||||||||||||||||||||  ||||||||||    
T  33413518 tactccctccgtccctaattataagacccttttgagaa 33413555  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #27
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 245 - 282
Target Start/End: Original strand, 44294789 - 44294826
Alignment:
Q  245 tactccctccgtccctaattataagattcttttgagaa 282  Q
    ||||||||||||||||||||||||||  ||||||||||    
T  44294789 tactccctccgtccctaattataagacccttttgagaa 44294826  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #28
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 252 - 281
Target Start/End: Complemental strand, 49490198 - 49490169
Alignment:
Q  252 tccgtccctaattataagattcttttgaga 281  Q
    ||||||||||||||||||||||||||||||    
T  49490198 tccgtccctaattataagattcttttgaga 49490169  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #29
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 245 - 282
Target Start/End: Original strand, 50533884 - 50533921
Alignment:
Q  245 tactccctccgtccctaattataagattcttttgagaa 282  Q
    |||||||||||||||||||||||||||  |||||||||    
T  50533884 tactccctccgtccctaattataagatcattttgagaa 50533921  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #30
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 245 - 282
Target Start/End: Original strand, 52977982 - 52978019
Alignment:
Q  245 tactccctccgtccctaattataagattcttttgagaa 282  Q
    ||||||||||||||||||||||||||  ||||||||||    
T  52977982 tactccctccgtccctaattataagacccttttgagaa 52978019  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #31
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 243 - 279
Target Start/End: Complemental strand, 26889938 - 26889902
Alignment:
Q  243 aatactccctccgtccctaattataagattcttttga 279  Q
    |||||| |||||||||||||||||||||| |||||||    
T  26889938 aatactacctccgtccctaattataagatccttttga 26889902  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #32
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 245 - 281
Target Start/End: Complemental strand, 36901147 - 36901111
Alignment:
Q  245 tactccctccgtccctaattataagattcttttgaga 281  Q
    |||| |||||||||||||||||||||| |||||||||    
T  36901147 tactacctccgtccctaattataagatccttttgaga 36901111  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #33
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 250 - 282
Target Start/End: Original strand, 54623806 - 54623838
Alignment:
Q  250 cctccgtccctaattataagattcttttgagaa 282  Q
    |||||||||||||||||||||| ||||||||||    
T  54623806 cctccgtccctaattataagatccttttgagaa 54623838  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0457 (Bit Score: 34; Significance: 0.0000000005; HSPs: 1)
Name: scaffold0457
Description:

Target: scaffold0457; HSP #1
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 245 - 282
Target Start/End: Complemental strand, 4700 - 4663
Alignment:
Q  245 tactccctccgtccctaattataagattcttttgagaa 282  Q
    |||| |||||||||||||||||||||||||||||||||    
T  4700 tactacctccgtccctaattataagattcttttgagaa 4663  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0019 (Bit Score: 34; Significance: 0.0000000005; HSPs: 1)
Name: scaffold0019
Description:

Target: scaffold0019; HSP #1
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 245 - 314
Target Start/End: Original strand, 117846 - 117915
Alignment:
Q  245 tactccctccgtccctaattataagattcttttgagaannnnnnnngttcctttttataagacccctttg 314  Q
    |||| |||||||||||||||||||||| ||||||||||        || |||||||||||||||||||||    
T  117846 tacttcctccgtccctaattataagatccttttgagaattttttttgtccctttttataagacccctttg 117915  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0250 (Bit Score: 32; Significance: 0.000000007; HSPs: 1)
Name: scaffold0250
Description:

Target: scaffold0250; HSP #1
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 243 - 282
Target Start/End: Complemental strand, 9465 - 9426
Alignment:
Q  243 aatactccctccgtccctaattataagattcttttgagaa 282  Q
    |||||| |||||||||||||||||||||| ||||||||||    
T  9465 aatactacctccgtccctaattataagatccttttgagaa 9426  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0008 (Bit Score: 32; Significance: 0.000000007; HSPs: 1)
Name: scaffold0008
Description:

Target: scaffold0008; HSP #1
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 243 - 282
Target Start/End: Complemental strand, 259161 - 259122
Alignment:
Q  243 aatactccctccgtccctaattataagattcttttgagaa 282  Q
    ||||||||||||||||||||||||||||  ||||||||||    
T  259161 aatactccctccgtccctaattataagacccttttgagaa 259122  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0604 (Bit Score: 31; Significance: 0.00000003; HSPs: 1)
Name: scaffold0604
Description:

Target: scaffold0604; HSP #1
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 245 - 316
Target Start/End: Complemental strand, 3819 - 3749
Alignment:
Q  245 tactccctccgtccctaattataagattcttttgagaannnnnnnngttcctttttataagacccctttgct 316  Q
    ||||||||||||||||||||||||||  ||||||||||        || |||||||||||||||||||||||    
T  3819 tactccctccgtccctaattataagacccttttgagaa-tttttttgtccctttttataagacccctttgct 3749  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0122 (Bit Score: 31; Significance: 0.00000003; HSPs: 1)
Name: scaffold0122
Description:

Target: scaffold0122; HSP #1
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 244 - 282
Target Start/End: Original strand, 12064 - 12102
Alignment:
Q  244 atactccctccgtccctaattataagattcttttgagaa 282  Q
    |||||||||||||||||||||||||||  ||||||||||    
T  12064 atactccctccgtccctaattataagacccttttgagaa 12102  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0121 (Bit Score: 31; Significance: 0.00000003; HSPs: 1)
Name: scaffold0121
Description:

Target: scaffold0121; HSP #1
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 244 - 282
Target Start/End: Complemental strand, 24668 - 24630
Alignment:
Q  244 atactccctccgtccctaattataagattcttttgagaa 282  Q
    ||||||||||||| |||||||||||||| ||||||||||    
T  24668 atactccctccgttcctaattataagatccttttgagaa 24630  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0029 (Bit Score: 31; Significance: 0.00000003; HSPs: 1)
Name: scaffold0029
Description:

Target: scaffold0029; HSP #1
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 244 - 282
Target Start/End: Complemental strand, 51720 - 51682
Alignment:
Q  244 atactccctccgtccctaattataagattcttttgagaa 282  Q
    |||||||||||||||||||||||||||  ||||||||||    
T  51720 atactccctccgtccctaattataagacccttttgagaa 51682  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0012 (Bit Score: 31; Significance: 0.00000003; HSPs: 2)
Name: scaffold0012
Description:

Target: scaffold0012; HSP #1
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 244 - 282
Target Start/End: Original strand, 47639 - 47677
Alignment:
Q  244 atactccctccgtccctaattataagattcttttgagaa 282  Q
    |||||||||||||||||||||||||||  ||||||||||    
T  47639 atactccctccgtccctaattataagacccttttgagaa 47677  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0012; HSP #2
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 245 - 278
Target Start/End: Complemental strand, 47937 - 47904
Alignment:
Q  245 tactccctccgtccctaattataagattcttttg 278  Q
    ||||||||||||||||||||||||||| ||||||    
T  47937 tactccctccgtccctaattataagatccttttg 47904  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]



© Oklahoma State University