View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF14614_low_48 (Length: 292)
Name: NF14614_low_48
Description: NF14614
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF14614_low_48 |
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Alignment Details
Target: chr1 (Bit Score: 269; Significance: 1e-150; HSPs: 1)
Name: chr1
Description:
Target: chr1; HSP #1
Raw Score: 269; E-Value: 1e-150
Query Start/End: Original strand, 19 - 287
Target Start/End: Complemental strand, 4124217 - 4123949
Alignment:
| Q |
19 |
tcattcatctccctcaatgggttctcaaccaacgccgtgaacgtaaaaacctcgacatcctcgaacgcaaaggtatcatcaatccacctgaaccgtatgt |
118 |
Q |
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| T |
4124217 |
tcattcatctccctcaatgggttctcaaccaacgccgtgaacgtaaaaacctcgacatcctcgaacgcaaaggtatcatcaatccacctgaaccgtatgt |
4124118 |
T |
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| Q |
119 |
atgttctgtctgtggtagaaaatgtaaaactaacgtagatcttaagaaacacttcaaacagcttcatcaacgtgagagacagaagaagctgaaccgtttg |
218 |
Q |
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| T |
4124117 |
atgttctgtctgtggtagaaaatgtaaaactaacgtagatcttaagaaacacttcaaacagcttcatcaacgtgagagacagaagaagctgaaccgtttg |
4124018 |
T |
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| Q |
219 |
aattctttgaaggggaagaagaggcagaagtataaggagaggtttgtgagtggtgatgacaagtataat |
287 |
Q |
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| T |
4124017 |
aattctttgaaggggaagaagaggcagaagtataaggagaggtttgtgagtggtgatgacaagtataat |
4123949 |
T |
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