View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF14614_low_57 (Length: 269)
Name: NF14614_low_57
Description: NF14614
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF14614_low_57 |
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Alignment Details
Target: chr3 (Bit Score: 209; Significance: 1e-114; HSPs: 1)
Name: chr3
Description:
Target: chr3; HSP #1
Raw Score: 209; E-Value: 1e-114
Query Start/End: Original strand, 14 - 254
Target Start/End: Original strand, 51704799 - 51705039
Alignment:
| Q |
14 |
agcataggcgggtaaaaatgttgtgtcatttcatcttttgtgttttggtgtgtggatatatgcccatatttctaatatgatatggtctgtttcttttact |
113 |
Q |
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| T |
51704799 |
agcacaggcgggtaaaaatgttgtgtcatttcatcttttgtgttttggtgtgtggatatatgcccatatttctaatatgatatggtttgtttcttttact |
51704898 |
T |
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| Q |
114 |
aatgattgttctcaagtaagttgannnnnnnnatttacaaaggataagtgataagtatctcgattgttcattcaattttagcatatgatacaagcacaac |
213 |
Q |
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|||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
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| T |
51704899 |
aatgattgttctcaagtaagttgattttttttatttacaaaggataagtgataagtatctcgattgttcattcaattttagcatatgatacaagcacaac |
51704998 |
T |
|
| Q |
214 |
ttagaaaagtcattaaaaggttatgttactgcagtgagaag |
254 |
Q |
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| T |
51704999 |
ttagaaaagtcattaaaaggttatgttactgcagtgagaag |
51705039 |
T |
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