View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF14616_high_33 (Length: 219)
Name: NF14616_high_33
Description: NF14616
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF14616_high_33 |
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Alignment Details
Target: chr8 (Bit Score: 188; Significance: 1e-102; HSPs: 1)
Name: chr8
Description:
Target: chr8; HSP #1
Raw Score: 188; E-Value: 1e-102
Query Start/End: Original strand, 12 - 203
Target Start/End: Original strand, 34223136 - 34223327
Alignment:
| Q |
12 |
gaatatgaatgaaaggaaaagagaagggaaagaagatctaggaacaaataaacaaacgaaacgcaccttggtgggccaataaaaccatcgataataatat |
111 |
Q |
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| T |
34223136 |
gaatatgaatgaaaggaaaagaaaagggaaagaagatctaggaacaaataaacaaacgaaacgcaccttggtgggccaataaaaccatcgataataatat |
34223235 |
T |
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| Q |
112 |
gagctacatgcactccttgaggctgaaattctctagcaaggcattgtgatagtgctctcaaagcgaatttcccacagcctgtctcatgcata |
203 |
Q |
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|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
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| T |
34223236 |
gagctacatgcactccttgaggctgaaattctctagcaaggcattgtgatagtgctctcaaagcgaatttcccacagcctgtctcatgcata |
34223327 |
T |
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