View Alignment

This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.

Legend
 Query
 Query hiting target  Query hiting target's complemental strand
 Query's complemental strand hiting target  Query's complemental strand hiting target's complemental strand

Alignment Overview

Query: NF14616_low_22 (Length: 334)

Name: NF14616_low_22
Description: NF14616
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)


[»] NF14616_low_22
NF14616_low_22
[»] chr7 (47 HSPs)
chr7 (33-147)||(48646057-48646171)
chr7 (33-145)||(10899074-10899186)
chr7 (51-147)||(44333147-44333243)
chr7 (33-147)||(7258283-7258397)
chr7 (45-147)||(35727707-35727809)
chr7 (33-147)||(48788673-48788787)
chr7 (46-147)||(43457465-43457566)
chr7 (33-143)||(8374926-8375036)
chr7 (33-147)||(30925009-30925123)
chr7 (33-147)||(46286511-46286625)
chr7 (183-290)||(48705644-48705750)
chr7 (33-147)||(48647444-48647558)
chr7 (45-147)||(48777264-48777366)
chr7 (45-147)||(8375596-8375698)
chr7 (45-147)||(44334462-44334564)
chr7 (45-126)||(13578333-13578414)
chr7 (33-123)||(7259685-7259775)
chr7 (45-147)||(12223712-12223814)
chr7 (45-147)||(35729099-35729201)
chr7 (33-139)||(42477397-42477502)
chr7 (47-147)||(45583692-45583792)
chr7 (48-135)||(8048800-8048887)
chr7 (33-115)||(44529068-44529150)
chr7 (45-107)||(44530624-44530686)
chr7 (192-277)||(33474361-33474445)
chr7 (44-128)||(12220050-12220134)
chr7 (45-147)||(39708111-39708213)
chr7 (33-102)||(45584497-45584566)
chr7 (55-147)||(21062825-21062917)
chr7 (33-145)||(33607624-33607736)
chr7 (55-147)||(34704917-34705009)
chr7 (45-147)||(5930146-5930247)
chr7 (56-120)||(10894385-10894449)
chr7 (34-94)||(43461730-43461789)
chr7 (33-147)||(19433935-19434049)
chr7 (43-135)||(24844593-24844685)
chr7 (33-97)||(32793229-32793293)
chr7 (33-139)||(8879544-8879651)
chr7 (33-99)||(25621722-25621788)
chr7 (45-123)||(34888936-34889014)
chr7 (35-120)||(24288869-24288954)
chr7 (48-126)||(7509487-7509565)
chr7 (83-158)||(24934799-24934876)
chr7 (41-127)||(27067811-27067896)
chr7 (41-127)||(27210417-27210502)
chr7 (33-66)||(33060899-33060932)
chr7 (156-228)||(5082481-5082552)
[»] chr2 (42 HSPs)
chr2 (33-147)||(31091528-31091642)
chr2 (45-147)||(32766252-32766354)
chr2 (33-147)||(2910108-2910222)
chr2 (34-147)||(40000336-40000449)
chr2 (45-144)||(17330243-17330342)
chr2 (11-143)||(31090176-31090308)
chr2 (45-147)||(24459459-24459561)
chr2 (44-134)||(17466840-17466930)
chr2 (33-147)||(24458068-24458182)
chr2 (33-147)||(32764946-32765060)
chr2 (33-147)||(39015013-39015127)
chr2 (46-147)||(34037687-34037788)
chr2 (33-113)||(14704048-14704128)
chr2 (33-147)||(39016384-39016496)
chr2 (46-147)||(21733785-21733889)
chr2 (34-119)||(7073675-7073760)
chr2 (52-147)||(5915012-5915107)
chr2 (192-263)||(7888572-7888643)
chr2 (33-147)||(34582671-34582785)
chr2 (45-146)||(38985002-38985103)
chr2 (200-276)||(10824259-10824334)
chr2 (202-294)||(803889-803980)
chr2 (45-125)||(7412122-7412202)
chr2 (46-128)||(2911505-2911587)
chr2 (45-103)||(17466093-17466151)
chr2 (45-161)||(12746214-12746332)
chr2 (33-104)||(26586296-26586367)
chr2 (45-104)||(31814357-31814416)
chr2 (42-124)||(15441981-15442063)
chr2 (33-147)||(38853763-38853877)
chr2 (46-136)||(21732131-21732216)
chr2 (47-135)||(5914324-5914412)
chr2 (192-238)||(445602-445648)
chr2 (45-147)||(8420021-8420123)
chr2 (45-123)||(33161799-33161877)
chr2 (192-276)||(6975837-6975919)
chr2 (89-158)||(14887555-14887626)
chr2 (36-147)||(33163462-33163574)
chr2 (195-241)||(33726405-33726451)
chr2 (195-240)||(2239607-2239652)
chr2 (45-126)||(11985720-11985801)
chr2 (46-118)||(43380617-43380689)
[»] chr8 (38 HSPs)
chr8 (33-147)||(32898446-32898560)
chr8 (33-143)||(35177407-35177517)
chr8 (33-147)||(35178805-35178919)
chr8 (33-147)||(1952971-1953084)
chr8 (33-126)||(5965443-5965536)
chr8 (183-276)||(43819551-43819643)
chr8 (156-274)||(7207194-7207310)
chr8 (47-128)||(41754810-41754891)
chr8 (192-294)||(24066973-24067074)
chr8 (48-147)||(30134574-30134673)
chr8 (56-147)||(41754006-41754097)
chr8 (33-99)||(45476218-45476284)
chr8 (200-294)||(617525-617617)
chr8 (200-294)||(623918-624010)
chr8 (33-147)||(5738024-5738138)
chr8 (33-147)||(10407585-10407699)
chr8 (192-294)||(42542994-42543095)
chr8 (41-107)||(28619554-28619620)
chr8 (52-128)||(1951970-1952045)
chr8 (41-145)||(31074004-31074108)
chr8 (33-85)||(45476564-45476616)
chr8 (207-294)||(589913-589998)
chr8 (33-116)||(28619028-28619111)
chr8 (46-144)||(33314872-33314970)
chr8 (45-118)||(5736879-5736952)
chr8 (83-139)||(28005359-28005415)
chr8 (83-139)||(28062662-28062718)
chr8 (184-230)||(12221022-12221068)
chr8 (33-103)||(28524810-28524880)
chr8 (50-104)||(41121160-41121214)
chr8 (83-157)||(59548-59624)
chr8 (194-294)||(27737704-27737803)
chr8 (194-233)||(8210174-8210213)
chr8 (45-92)||(10406269-10406316)
chr8 (44-123)||(24198966-24199045)
chr8 (195-241)||(4308834-4308880)
chr8 (45-107)||(12637771-12637833)
chr8 (33-126)||(8569437-8569530)
[»] chr1 (37 HSPs)
chr1 (33-139)||(7945555-7945661)
chr1 (35-147)||(32665773-32665885)
chr1 (33-143)||(5782426-5782536)
chr1 (33-144)||(9339657-9339768)
chr1 (33-116)||(9341026-9341109)
chr1 (33-128)||(10333187-10333282)
chr1 (44-135)||(52440571-52440662)
chr1 (45-147)||(10332994-10333096)
chr1 (33-147)||(22856688-22856802)
chr1 (33-147)||(6612427-6612541)
chr1 (192-276)||(51046645-51046728)
chr1 (45-128)||(5783122-5783205)
chr1 (45-141)||(7944169-7944265)
chr1 (194-263)||(32268033-32268102)
chr1 (33-147)||(52439487-52439597)
chr1 (45-104)||(6613992-6614051)
chr1 (182-274)||(13925101-13925191)
chr1 (44-145)||(1001164-1001265)
chr1 (47-143)||(3117661-3117757)
chr1 (53-145)||(44019996-44020088)
chr1 (33-147)||(8975167-8975281)
chr1 (33-147)||(44719358-44719472)
chr1 (200-277)||(1107386-1107462)
chr1 (46-107)||(25037926-25037987)
chr1 (46-107)||(25043138-25043199)
chr1 (48-128)||(534574-534653)
chr1 (200-294)||(39421026-39421126)
chr1 (45-104)||(50107216-50107275)
chr1 (45-147)||(11060797-11060899)
chr1 (182-230)||(12173173-12173221)
chr1 (33-145)||(51450011-51450122)
chr1 (48-95)||(34088485-34088532)
chr1 (156-230)||(46289632-46289705)
chr1 (202-262)||(3894800-3894861)
chr1 (227-294)||(46289579-46289645)
chr1 (194-240)||(27210749-27210795)
chr1 (195-257)||(41898878-41898940)
[»] chr6 (11 HSPs)
chr6 (33-147)||(30748007-30748121)
chr6 (33-147)||(31219161-31219275)
chr6 (48-147)||(31218963-31219062)
chr6 (182-294)||(1947417-1947528)
chr6 (183-294)||(16441775-16441885)
chr6 (33-147)||(23507957-23508070)
chr6 (200-263)||(19646027-19646090)
chr6 (41-135)||(12676479-12676573)
chr6 (62-122)||(6468811-6468871)
chr6 (200-263)||(5138503-5138565)
chr6 (200-294)||(27127493-27127586)
[»] chr5 (32 HSPs)
chr5 (33-147)||(8074459-8074573)
chr5 (33-147)||(4592869-4592983)
chr5 (45-147)||(28591127-28591229)
chr5 (33-147)||(546037-546150)
chr5 (33-135)||(25590451-25590552)
chr5 (33-147)||(2464677-2464791)
chr5 (41-147)||(9538058-9538164)
chr5 (33-147)||(16611736-16611850)
chr5 (45-134)||(19182971-19183060)
chr5 (33-147)||(2466775-2466889)
chr5 (33-147)||(14891148-14891258)
chr5 (48-147)||(21069297-21069396)
chr5 (61-147)||(18400198-18400284)
chr5 (33-145)||(9537033-9537144)
chr5 (33-117)||(19186221-19186305)
chr5 (48-147)||(40612675-40612774)
chr5 (36-134)||(8075837-8075935)
chr5 (41-145)||(18004648-18004752)
chr5 (41-136)||(544668-544762)
chr5 (33-128)||(32640315-32640410)
chr5 (33-123)||(32641727-32641817)
chr5 (85-147)||(13651173-13651234)
chr5 (42-147)||(16979000-16979105)
chr5 (50-109)||(4594118-4594176)
chr5 (42-147)||(13483029-13483133)
chr5 (46-92)||(14881010-14881056)
chr5 (45-147)||(31947050-31947152)
chr5 (50-147)||(13483174-13483275)
chr5 (192-259)||(28782706-28782773)
chr5 (33-115)||(28589739-28589821)
chr5 (207-263)||(10317259-10317315)
chr5 (110-147)||(24900410-24900447)
[»] chr3 (46 HSPs)
chr3 (33-147)||(17700526-17700640)
chr3 (45-147)||(48572993-48573095)
chr3 (33-147)||(17701920-17702034)
chr3 (33-147)||(36278960-36279074)
chr3 (33-147)||(52318318-52318432)
chr3 (34-123)||(11773053-11773142)
chr3 (45-147)||(2591635-2591737)
chr3 (45-147)||(45600952-45601053)
chr3 (33-147)||(47118052-47118166)
chr3 (33-147)||(55388081-55388195)
chr3 (45-147)||(2592020-2592122)
chr3 (33-147)||(19114541-19114655)
chr3 (182-294)||(21814202-21814312)
chr3 (48-147)||(34263813-34263912)
chr3 (33-116)||(36280318-36280401)
chr3 (45-147)||(33428448-33428550)
chr3 (33-147)||(50753825-50753939)
chr3 (45-146)||(20464078-20464179)
chr3 (194-294)||(15502622-15502721)
chr3 (33-147)||(47075352-47075466)
chr3 (33-119)||(53959101-53959187)
chr3 (45-147)||(55389482-55389584)
chr3 (195-294)||(41998907-41999005)
chr3 (198-276)||(1165784-1165861)
chr3 (33-147)||(3671047-3671160)
chr3 (45-107)||(48574472-48574534)
chr3 (34-118)||(49261539-49261620)
chr3 (45-147)||(52316987-52317089)
chr3 (45-141)||(48808380-48808476)
chr3 (194-276)||(15005830-15005911)
chr3 (45-147)||(19115160-19115261)
chr3 (182-279)||(3084012-3084107)
chr3 (195-294)||(34060751-34060850)
chr3 (80-146)||(19331117-19331183)
chr3 (60-147)||(53957683-53957769)
chr3 (41-123)||(36827484-36827566)
chr3 (56-130)||(47427885-47427959)
chr3 (44-147)||(47428575-47428672)
chr3 (194-276)||(21195283-21195364)
chr3 (46-116)||(33427791-33427860)
chr3 (33-118)||(39497244-39497329)
chr3 (45-143)||(40205893-40205992)
chr3 (197-264)||(54143822-54143889)
chr3 (199-253)||(22455369-22455423)
chr3 (45-75)||(48809667-48809697)
chr3 (192-241)||(28954253-28954302)
[»] chr4 (32 HSPs)
chr4 (45-147)||(53771062-53771164)
chr4 (45-147)||(47878497-47878599)
chr4 (45-158)||(47874559-47874674)
chr4 (36-147)||(31844730-31844841)
chr4 (33-147)||(42278057-42278171)
chr4 (33-147)||(53770341-53770455)
chr4 (45-147)||(26172955-26173057)
chr4 (33-145)||(39868932-39869042)
chr4 (41-147)||(4703226-4703332)
chr4 (33-147)||(48740021-48740135)
chr4 (48-128)||(54574452-54574532)
chr4 (182-277)||(4867772-4867866)
chr4 (41-143)||(26685431-26685528)
chr4 (192-277)||(45674164-45674248)
chr4 (33-95)||(19050298-19050360)
chr4 (33-147)||(39870675-39870789)
chr4 (54-147)||(19051253-19051346)
chr4 (33-107)||(50694797-50694871)
chr4 (49-103)||(54574822-54574876)
chr4 (77-158)||(42391933-42392016)
chr4 (45-107)||(21621871-21621933)
chr4 (45-143)||(26170652-26170750)
chr4 (45-126)||(4701794-4701875)
chr4 (192-249)||(45683989-45684046)
chr4 (68-143)||(44158516-44158591)
chr4 (45-139)||(21623130-21623224)
chr4 (208-294)||(29722067-29722152)
chr4 (156-230)||(35911151-35911224)
chr4 (46-103)||(2786273-2786330)
chr4 (34-95)||(25810415-25810476)
chr4 (194-275)||(45257608-45257688)
chr4 (45-105)||(6039171-6039231)
[»] scaffold0034 (1 HSPs)
scaffold0034 (45-147)||(116063-116165)
[»] scaffold0045 (2 HSPs)
scaffold0045 (194-275)||(62583-62663)
scaffold0045 (194-275)||(69915-69995)
[»] scaffold0767 (2 HSPs)
scaffold0767 (33-147)||(5607-5721)
scaffold0767 (46-143)||(6264-6361)
[»] scaffold0039 (3 HSPs)
scaffold0039 (33-143)||(79085-79195)
scaffold0039 (33-147)||(79684-79798)
scaffold0039 (50-143)||(74331-74424)
[»] scaffold0169 (1 HSPs)
scaffold0169 (194-262)||(9025-9093)
[»] scaffold0209 (1 HSPs)
scaffold0209 (200-294)||(29349-29441)
[»] scaffold0369 (1 HSPs)
scaffold0369 (33-97)||(9137-9201)
[»] scaffold0016 (1 HSPs)
scaffold0016 (83-158)||(36574-36650)


Alignment Details
Target: chr7 (Bit Score: 95; Significance: 2e-46; HSPs: 47)
Name: chr7
Description:

Target: chr7; HSP #1
Raw Score: 95; E-Value: 2e-46
Query Start/End: Original strand, 33 - 147
Target Start/End: Complemental strand, 48646171 - 48646057
Alignment:
Q  33 tttaacgacagagactaaagtgataacggaagtgcagagtcagagacttatttgtatttaatcctgagtcagggatctatgtgacagcgaggtgcacagt 132  Q
    |||||||||||||||||||||||||||||||||| |||||||| ||||||||||||||||||||||||||||||| |||||||||||||||||||| |||    
T  48646171 tttaacgacagagactaaagtgataacggaagtgtagagtcagggacttatttgtatttaatcctgagtcagggacctatgtgacagcgaggtgcatagt 48646072  T
Q  133 cagggactaaagtga 147  Q
    ||||||| |||||||    
T  48646071 cagggaccaaagtga 48646057  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #2
Raw Score: 89; E-Value: 7e-43
Query Start/End: Original strand, 33 - 145
Target Start/End: Original strand, 10899074 - 10899186
Alignment:
Q  33 tttaacgacagagactaaagtgataacggaagtgcagagtcagagacttatttgtatttaatcctgagtcagggatctatgtgacagcgaggtgcacagt 132  Q
    ||||||| ||| |||||||||||||||||||||||||||||||||||||||||||||||||||||| |||| |||||||||||||||||||||||| |||    
T  10899074 tttaacgtcagggactaaagtgataacggaagtgcagagtcagagacttatttgtatttaatcctgggtcaaggatctatgtgacagcgaggtgcagagt 10899173  T
Q  133 cagggactaaagt 145  Q
    ||||||| |||||    
T  10899174 cagggaccaaagt 10899186  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #3
Raw Score: 81; E-Value: 4e-38
Query Start/End: Original strand, 51 - 147
Target Start/End: Complemental strand, 44333243 - 44333147
Alignment:
Q  51 agtgataacggaagtgcagagtcagagacttatttgtatttaatcctgagtcagggatctatgtgacagcgaggtgcacagtcagggactaaagtga 147  Q
    ||||||||||||||||||||||||||||||||||||||||||||| ||||||||||| |||||||||||||||||||| |||||||||| |||||||    
T  44333243 agtgataacggaagtgcagagtcagagacttatttgtatttaatcatgagtcagggacctatgtgacagcgaggtgcagagtcagggaccaaagtga 44333147  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #4
Raw Score: 79; E-Value: 7e-37
Query Start/End: Original strand, 33 - 147
Target Start/End: Complemental strand, 7258397 - 7258283
Alignment:
Q  33 tttaacgacagagactaaagtgataacggaagtgcagagtcagagacttatttgtatttaatcctgagtcagggatctatgtgacagcgaggtgcacagt 132  Q
    ||||||| ||| ||||||||||||||| ||||||||||||||||||||||||||||||||||||||||| ||||| |||||||||| ||||||| | |||    
T  7258397 tttaacgtcagggactaaagtgataacagaagtgcagagtcagagacttatttgtatttaatcctgagttagggacctatgtgacaacgaggtgtagagt 7258298  T
Q  133 cagggactaaagtga 147  Q
    ||||||| |||||||    
T  7258297 cagggaccaaagtga 7258283  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #5
Raw Score: 79; E-Value: 7e-37
Query Start/End: Original strand, 45 - 147
Target Start/End: Complemental strand, 35727809 - 35727707
Alignment:
Q  45 gactaaagtgataacggaagtgcagagtcagagacttatttgtatttaatcctgagtcagggatctatgtgacagcgaggtgcacagtcagggactaaag 144  Q
    |||||||||||||||||| |||||||||||||||||||||| ||||||||||||||||||||| |||||||||||||||||||| |||||||||  ||||    
T  35727809 gactaaagtgataacggatgtgcagagtcagagacttatttatatttaatcctgagtcagggacctatgtgacagcgaggtgcagagtcagggatcaaag 35727710  T
Q  145 tga 147  Q
    |||    
T  35727709 tga 35727707  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #6
Raw Score: 79; E-Value: 7e-37
Query Start/End: Original strand, 33 - 147
Target Start/End: Original strand, 48788673 - 48788787
Alignment:
Q  33 tttaacgacagagactaaagtgataacggaagtgcagagtcagagacttatttgtatttaatcctgagtcagggatctatgtgacagcgaggtgcacagt 132  Q
    ||||||| ||||||||||||||||||||||||||||||||||||||||||||| ||||||||  ||||||||||| |||||||||||||||||||| |||    
T  48788673 tttaacgtcagagactaaagtgataacggaagtgcagagtcagagacttatttatatttaattatgagtcagggacctatgtgacagcgaggtgcaaagt 48788772  T
Q  133 cagggactaaagtga 147  Q
    || |||  |||||||    
T  48788773 caaggatcaaagtga 48788787  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #7
Raw Score: 74; E-Value: 6e-34
Query Start/End: Original strand, 46 - 147
Target Start/End: Complemental strand, 43457566 - 43457465
Alignment:
Q  46 actaaagtgataacggaagtgcagagtcagagacttatttgtatttaatcctgagtcagggatctatgtgacagcgaggtgcacagtcagggactaaagt 145  Q
    |||||||||||||||||||||||||||| | ||||||||||||||||||||||||||||||| ||||| ||||||||| |||| | ||||||||||||||    
T  43457566 actaaagtgataacggaagtgcagagtcggggacttatttgtatttaatcctgagtcagggacctatgcgacagcgagctgcagaatcagggactaaagt 43457467  T
Q  146 ga 147  Q
    ||    
T  43457466 ga 43457465  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #8
Raw Score: 71; E-Value: 4e-32
Query Start/End: Original strand, 33 - 143
Target Start/End: Complemental strand, 8375036 - 8374926
Alignment:
Q  33 tttaacgacagagactaaagtgataacggaagtgcagagtcagagacttatttgtatttaatcctgagtcagggatctatgtgacagcgaggtgcacagt 132  Q
    ||||||| || ||||||||||||||||||||||||| | ||||| |||| |||||||||||| ||||||||| || |||||||||||||||||||| |||    
T  8375036 tttaacgtcaaagactaaagtgataacggaagtgcaaaatcagaaacttttttgtatttaattctgagtcagagacctatgtgacagcgaggtgcagagt 8374937  T
Q  133 cagggactaaa 143  Q
    |||||||||||    
T  8374936 cagggactaaa 8374926  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #9
Raw Score: 71; E-Value: 4e-32
Query Start/End: Original strand, 33 - 147
Target Start/End: Original strand, 30925009 - 30925123
Alignment:
Q  33 tttaacgacagagactaaagtgataacggaagtgcagagtcagagacttatttgtatttaatcctgagtcagggatctatgtgacagcgaggtgcacagt 132  Q
    ||||||| ||||||||||||| |||||||||||||| |||||||||||||||||||||||||||||||||| ||| ||||||||| | ||| |||| | |    
T  30925009 tttaacgtcagagactaaagtaataacggaagtgcatagtcagagacttatttgtatttaatcctgagtcaaggacctatgtgactgggagctgcagaat 30925108  T
Q  133 cagggactaaagtga 147  Q
    |||||| ||||||||    
T  30925109 cagggattaaagtga 30925123  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #10
Raw Score: 71; E-Value: 4e-32
Query Start/End: Original strand, 33 - 147
Target Start/End: Complemental strand, 46286625 - 46286511
Alignment:
Q  33 tttaacgacagagactaaagtgataacggaagtgcagagtcagagacttatttgtatttaatcctgagtcagggatctatgtgacagcgaggtgcacagt 132  Q
    |||||||  ||||| |||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||| || | | |||||||| || | |||    
T  46286625 tttaacggtagagattaaagtgataacagaagtgcagagtcagagacttatttgtatttaatcctgagtcagggacctttctaacagcgagatgaagagt 46286526  T
Q  133 cagggactaaagtga 147  Q
    |||||||||||||||    
T  46286525 cagggactaaagtga 46286511  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #11
Raw Score: 68; E-Value: 2e-30
Query Start/End: Original strand, 183 - 290
Target Start/End: Original strand, 48705644 - 48705750
Alignment:
Q  183 gaaattattactttttaacttttagaaagttgaattcaacatttttcaccatttttcaagaaattatttctatttatgttcctcttaaccaatgcacaaa 282  Q
    |||||||  |||||||||||||||||||||||||||||||| ||||||||||||||||| |||||||||||||||||||| ||||||| |||||| | ||    
T  48705644 gaaattacaactttttaacttttagaaagttgaattcaacacttttcaccatttttcaacaaattatttctatttatgtt-ctcttaaacaatgccccaa 48705742  T
Q  283 ggacactc 290  Q
    || |||||    
T  48705743 ggccactc 48705750  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #12
Raw Score: 67; E-Value: 1e-29
Query Start/End: Original strand, 33 - 147
Target Start/End: Original strand, 48647444 - 48647558
Alignment:
Q  33 tttaacgacagagactaaagtgataacggaagtgcagagtcagagacttatttgtatttaatcctgagtcagggatctatgtgacagcgaggtgcacagt 132  Q
    ||||||| ||| |||||||||||||||  ||||||||||| |||||||||||||||||||||||||||||||||| |||||||| |||||| || | | |    
T  48647444 tttaacgtcagggactaaagtgataacaaaagtgcagagtgagagacttatttgtatttaatcctgagtcagggacctatgtgatagcgagctgtagaat 48647543  T
Q  133 cagggactaaagtga 147  Q
    ||||| |||||||||    
T  48647544 cagggtctaaagtga 48647558  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #13
Raw Score: 67; E-Value: 1e-29
Query Start/End: Original strand, 45 - 147
Target Start/End: Complemental strand, 48777366 - 48777264
Alignment:
Q  45 gactaaagtgataacggaagtgcagagtcagagacttatttgtatttaatcctgagtcagggatctatgtgacagcgaggtgcacagtcagggactaaag 144  Q
    ||||||||||||||||||||||||||||||| || |||||||||||||||| |||||||||||  |||||||||||||| |||| | |||| ||||||||    
T  48777366 gactaaagtgataacggaagtgcagagtcagggaattatttgtatttaatcatgagtcagggacttatgtgacagcgagctgcagaatcagagactaaag 48777267  T
Q  145 tga 147  Q
    |||    
T  48777266 tga 48777264  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #14
Raw Score: 63; E-Value: 2e-27
Query Start/End: Original strand, 45 - 147
Target Start/End: Original strand, 8375596 - 8375698
Alignment:
Q  45 gactaaagtgataacggaagtgcagagtcagagacttatttgtatttaatcctgagtcagggatctatgtgacagcgaggtgcacagtcagggactaaag 144  Q
    ||||||| |||||||||||||||||||||||| |||| ||||||||||||| ||||||||||| ||||||||||| | |||||  ||||||||||||| |    
T  8375596 gactaaattgataacggaagtgcagagtcagaaacttctttgtatttaatcatgagtcagggacctatgtgacagtgcggtgcgaagtcagggactaatg 8375695  T
Q  145 tga 147  Q
    |||    
T  8375696 tga 8375698  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #15
Raw Score: 63; E-Value: 2e-27
Query Start/End: Original strand, 45 - 147
Target Start/End: Original strand, 44334462 - 44334564
Alignment:
Q  45 gactaaagtgataacggaagtgcagagtcagagacttatttgtatttaatcctgagtcagggatctatgtgacagcgaggtgcacagtcagggactaaag 144  Q
    |||||||||||||| |||||||||||||||| ||||||||| ||||||||| ||||||||||| |||||| |||||||| |||| | ||||| |||||||    
T  44334462 gactaaagtgataatggaagtgcagagtcagggacttatttatatttaatcatgagtcagggacctatgtaacagcgagctgcagaatcaggaactaaag 44334561  T
Q  145 tga 147  Q
    |||    
T  44334562 tga 44334564  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #16
Raw Score: 62; E-Value: 9e-27
Query Start/End: Original strand, 45 - 126
Target Start/End: Original strand, 13578333 - 13578414
Alignment:
Q  45 gactaaagtgataacggaagtgcagagtcagagacttatttgtatttaatcctgagtcagggatctatgtgacagcgaggtg 126  Q
    ||||||||||||||||||||||||||||||| |||||||||||||||||| ||||||||| ||||| | |||||||||||||    
T  13578333 gactaaagtgataacggaagtgcagagtcagtgacttatttgtatttaattctgagtcagtgatctttatgacagcgaggtg 13578414  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #17
Raw Score: 59; E-Value: 6e-25
Query Start/End: Original strand, 33 - 123
Target Start/End: Original strand, 7259685 - 7259775
Alignment:
Q  33 tttaacgacagagactaaagtgataacggaagtgcagagtcagagacttatttgtatttaatcctgagtcagggatctatgtgacagcgag 123  Q
    ||||||| ||| |||||||||||||||||||||| |||||||| ||||||||||||||||||||||| |||| || | |||||||||||||    
T  7259685 tttaacgtcagggactaaagtgataacggaagtgtagagtcagggacttatttgtatttaatcctgaatcagagacccatgtgacagcgag 7259775  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #18
Raw Score: 59; E-Value: 6e-25
Query Start/End: Original strand, 45 - 147
Target Start/End: Original strand, 12223712 - 12223814
Alignment:
Q  45 gactaaagtgataacggaagtgcagagtcagagacttatttgtatttaatcctgagtcagggatctatgtgacagcgaggtgcacagtcagggactaaag 144  Q
    ||||||||| ||||||||| ||||||||||| ||||| ||| ||||||||||||||||||||| ||||||||||  || |||||  ||||||||||||||    
T  12223712 gactaaagtaataacggaactgcagagtcagggacttctttatatttaatcctgagtcagggacctatgtgacattgatgtgcagtgtcagggactaaag 12223811  T
Q  145 tga 147  Q
    |||    
T  12223812 tga 12223814  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #19
Raw Score: 59; E-Value: 6e-25
Query Start/End: Original strand, 45 - 147
Target Start/End: Original strand, 35729099 - 35729201
Alignment:
Q  45 gactaaagtgataacggaagtgcagagtcagagacttatttgtatttaatcctgagtcagggatctatgtgacagcgaggtgcacagtcagggactaaag 144  Q
    ||||| ||||||| ||||||||||||||||| ||||||||||||| ||||||| ||||| ||| ||||||||||||||| |||| | ||||||| |||||    
T  35729099 gactacagtgatagcggaagtgcagagtcagtgacttatttgtatgtaatcctaagtcaaggacctatgtgacagcgagctgcaaaatcagggaataaag 35729198  T
Q  145 tga 147  Q
    |||    
T  35729199 tga 35729201  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #20
Raw Score: 59; E-Value: 6e-25
Query Start/End: Original strand, 33 - 139
Target Start/End: Complemental strand, 42477502 - 42477397
Alignment:
Q  33 tttaacgacagagactaaagtgataacggaagtgcagagtcagagacttatttgtatttaatcctgagtcagggatctatgtgacagcgaggtgcacagt 132  Q
    ||||||| ||| || |||| ||||||||||||||||||||||| |||||||||||||||||||||||||||| || ||||| |||| ||||||||| |||    
T  42477502 tttaacgtcagggattaaaatgataacggaagtgcagagtcag-gacttatttgtatttaatcctgagtcagagacctatgcgacaacgaggtgcagagt 42477404  T
Q  133 cagggac 139  Q
    || ||||    
T  42477403 caaggac 42477397  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #21
Raw Score: 57; E-Value: 9e-24
Query Start/End: Original strand, 47 - 147
Target Start/End: Complemental strand, 45583792 - 45583692
Alignment:
Q  47 ctaaagtgataacggaagtgcagagtcagagacttatttgtatttaatcctgagtcagggatctatgtgacagcgaggtgcacagtcagggactaaagtg 146  Q
    |||||||||||||||||||||||| ||||  |||||| |||||||||| |||||||||||| |||||||| |||||  |||| | |||||||||||||||    
T  45583792 ctaaagtgataacggaagtgcagaatcaggaacttatctgtatttaattctgagtcagggacctatgtgatagcgaactgcagaatcagggactaaagtg 45583693  T
Q  147 a 147  Q
    |    
T  45583692 a 45583692  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #22
Raw Score: 56; E-Value: 4e-23
Query Start/End: Original strand, 48 - 135
Target Start/End: Original strand, 8048800 - 8048887
Alignment:
Q  48 taaagtgataacggaagtgcagagtcagagacttatttgtatttaatcctgagtcagggatctatgtgacagcgaggtgcacagtcag 135  Q
    |||||||||||||||||||||||||| ||||||| ||||||||||||| |||||||| || || |||| |||||||||||| ||||||    
T  8048800 taaagtgataacggaagtgcagagtcggagacttctttgtatttaatcttgagtcagagacctttgtgtcagcgaggtgcagagtcag 8048887  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #23
Raw Score: 55; E-Value: 1e-22
Query Start/End: Original strand, 33 - 115
Target Start/End: Complemental strand, 44529150 - 44529068
Alignment:
Q  33 tttaacgacagagactaaagtgataacggaagtgcagagtcagagacttatttgtatttaatcctgagtcagggatctatgtg 115  Q
    ||||||| ||| ||||||||||||||| ||||||  ||||| ||||||||||||||||||||| |||||||||||||||||||    
T  44529150 tttaacgtcagggactaaagtgataacagaagtgttgagtcggagacttatttgtatttaatcatgagtcagggatctatgtg 44529068  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #24
Raw Score: 55; E-Value: 1e-22
Query Start/End: Original strand, 45 - 107
Target Start/End: Original strand, 44530624 - 44530686
Alignment:
Q  45 gactaaagtgataacggaagtgcagagtcagagacttatttgtatttaatcctgagtcaggga 107  Q
    ||||||||||||||||||||||||||||||||||||||||| |||||||||||||||| ||||    
T  44530624 gactaaagtgataacggaagtgcagagtcagagacttatttatatttaatcctgagtcgggga 44530686  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #25
Raw Score: 54; E-Value: 5e-22
Query Start/End: Original strand, 192 - 277
Target Start/End: Original strand, 33474361 - 33474445
Alignment:
Q  192 actttttaacttttagaaagttgaattcaacatttttcaccatttttcaagaaattatttctatttatgttcctcttaaccaatgc 277  Q
    ||||||| |||||||||||||||||||||||| ||||||  ||||||||| ||||||||||||||| |||| ||||||||||||||    
T  33474361 actttttgacttttagaaagttgaattcaacacttttcataatttttcaacaaattatttctatttttgtt-ctcttaaccaatgc 33474445  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #26
Raw Score: 53; E-Value: 2e-21
Query Start/End: Original strand, 44 - 128
Target Start/End: Complemental strand, 12220134 - 12220050
Alignment:
Q  44 agactaaagtgataacggaagtgcagagtcagagacttatttgtatttaatcctgagtcagggatctatgtgacagcgaggtgca 128  Q
    |||||||||||||| | ||||||||||||||||||||| ||| ||||||||| ||||||||| |||| ||||||| |||||||||    
T  12220134 agactaaagtgatatcagaagtgcagagtcagagacttctttctatttaatcttgagtcaggaatctttgtgacaacgaggtgca 12220050  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #27
Raw Score: 51; E-Value: 3e-20
Query Start/End: Original strand, 45 - 147
Target Start/End: Complemental strand, 39708213 - 39708111
Alignment:
Q  45 gactaaagtgataacggaagtgcagagtcagagacttatttgtatttaatcctgagtcagggatctatgtgacagcgaggtgcacagtcagggactaaag 144  Q
    |||||||||||||||||||||||| |||| | ||||| |||||||| |||| ||||||| ||| || |||||| ||||||| || |||||| ||||||||    
T  39708213 gactaaagtgataacggaagtgcaaagtcggtgacttctttgtattcaatcttgagtcatggacctttgtgacggcgaggtacagagtcagagactaaag 39708114  T
Q  145 tga 147  Q
    |||    
T  39708113 tga 39708111  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #28
Raw Score: 50; E-Value: 1e-19
Query Start/End: Original strand, 33 - 102
Target Start/End: Original strand, 45584497 - 45584566
Alignment:
Q  33 tttaacgacagagactaaagtgataacggaagtgcagagtcagagacttatttgtatttaatcctgagtc 102  Q
    ||||||| ||| ||||||||||||||||||||||||||||||  | ||||||||||||||||||||||||    
T  45584497 tttaacgtcagggactaaagtgataacggaagtgcagagtcattggcttatttgtatttaatcctgagtc 45584566  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #29
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 55 - 147
Target Start/End: Complemental strand, 21062917 - 21062825
Alignment:
Q  55 ataacggaagtgcagagtcagagacttatttgtatttaatcctgagtcagggatctatgtgacagcgaggtgcacagtcagggactaaagtga 147  Q
    |||||||| |||||||| |   ||||| | ||||||||||||||||||| ||| || | ||||||||||||||| ||||||||||||||||||    
T  21062917 ataacggaggtgcagagccgaggacttctatgtatttaatcctgagtcaaggacctttatgacagcgaggtgcaaagtcagggactaaagtga 21062825  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #30
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 33 - 145
Target Start/End: Original strand, 33607624 - 33607736
Alignment:
Q  33 tttaacgacagagactaaagtgataacggaagtgcagagtcagagacttatttgtatttaatcctgagtcagggatctatgtgacagcgaggtgcacagt 132  Q
    ||||||| ||| | ||||| |||||||||||||||||| |||||||||| ||||||||||||||||| |||| || || ||| ||| ||| || || |||    
T  33607624 tttaacgtcagggtctaaaatgataacggaagtgcagaatcagagacttctttgtatttaatcctgaatcagagacctttgtaacatcgaagtacatagt 33607723  T
Q  133 cagggactaaagt 145  Q
     || |||||||||    
T  33607724 tagagactaaagt 33607736  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #31
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 55 - 147
Target Start/End: Complemental strand, 34705009 - 34704917
Alignment:
Q  55 ataacggaagtgcagagtcagagacttatttgtatttaatcctgagtcagggatctatgtgacagcgaggtgcacagtcagggactaaagtga 147  Q
    |||||| |||| || |||||||||||| |||||||||||||||||||||| |  || ||||||| ||||||||| |||| | |||||||||||    
T  34705009 ataacgaaagtacacagtcagagacttctttgtatttaatcctgagtcagaggcctttgtgacaacgaggtgcagagtcggagactaaagtga 34704917  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #32
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 45 - 147
Target Start/End: Original strand, 5930146 - 5930247
Alignment:
Q  45 gactaaagtgataacggaagtgcagagtcagagacttatttgtatttaatcctgagtcagggatctatgtgacagcgaggtgcacagtcagggactaaag 144  Q
    |||||||||||||||||||||||| |||| || | ||  |||||||||||||||||| ||||| || ||||| ||||| ||||| ||| || ||||||||    
T  5930146 gactaaagtgataacggaagtgcacagtc-gaaaatttcttgtatttaatcctgagttagggacctttgtgatagcgaagtgcaaagtaagagactaaag 5930244  T
Q  145 tga 147  Q
    |||    
T  5930245 tga 5930247  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #33
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 56 - 120
Target Start/End: Complemental strand, 10894449 - 10894385
Alignment:
Q  56 taacggaagtgcagagtcagagacttatttgtatttaatcctgagtcagggatctatgtgacagc 120  Q
    ||||||||||||||| | |||||||||||| ||||||||| ||||||||||| |||||| |||||    
T  10894449 taacggaagtgcagaattagagacttatttatatttaatcttgagtcagggacctatgtaacagc 10894385  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #34
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 34 - 94
Target Start/End: Original strand, 43461730 - 43461789
Alignment:
Q  34 ttaacgacagagactaaagtgataacggaagtgcagagtcagagacttatttgtatttaat 94  Q
    |||||| |||||||||||||||||||||||||||| ||||| | |||||||||||||||||    
T  43461730 ttaacgtcagagactaaagtgataacggaagtgcatagtca-aaacttatttgtatttaat 43461789  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #35
Raw Score: 39; E-Value: 0.0000000000005
Query Start/End: Original strand, 33 - 147
Target Start/End: Original strand, 19433935 - 19434049
Alignment:
Q  33 tttaacgacagagactaaagtgataacggaagtgcagagtcagagacttatttgtatttaatcctgagtcagggatctatgtgacagcgaggtgcacagt 132  Q
    ||||||| || |||||||||||||||| ||||||| ||||| | |||||  || ||||||||||| | |||| || || ||||||| |||| || | |||    
T  19433935 tttaacgccatagactaaagtgataactgaagtgcggagtcggtgacttccttatatttaatcctaaatcagagacctttgtgacaacgagatggagagt 19434034  T
Q  133 cagggactaaagtga 147  Q
     ||||||||||||||    
T  19434035 tagggactaaagtga 19434049  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #36
Raw Score: 37; E-Value: 0.000000000008
Query Start/End: Original strand, 43 - 135
Target Start/End: Complemental strand, 24844685 - 24844593
Alignment:
Q  43 gagactaaagtgataacggaagtgcagagtcagagacttatttgtatttaatcctgagtcagggatctatgtgacagcgaggtgcacagtcag 135  Q
    ||||||||| |||||| ||||||||| | |||  ||||  ||||||||||||||||||| | ||| ||  |||||||||||||||| ||||||    
T  24844685 gagactaaactgataatggaagtgcacattcaatgactactttgtatttaatcctgagttatggaccttggtgacagcgaggtgcagagtcag 24844593  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #37
Raw Score: 37; E-Value: 0.000000000008
Query Start/End: Original strand, 33 - 97
Target Start/End: Complemental strand, 32793293 - 32793229
Alignment:
Q  33 tttaacgacagagactaaagtgataacggaagtgcagagtcagagacttatttgtatttaatcct 97  Q
    ||||||| || |||||||||||||||| ||| |||||| |||  |||||||||||||||||||||    
T  32793293 tttaacgccaaagactaaagtgataaccgaaatgcagaatcaatgacttatttgtatttaatcct 32793229  T

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Target: chr7; HSP #38
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 33 - 139
Target Start/End: Original strand, 8879544 - 8879651
Alignment:
Q  33 tttaacgacagagactaaagtgataacggaagtgcagagtcagagacttatttgtatttaatcctgagtcagggatc-tatgtgacagcgaggtgcacag 131  Q
    ||||||| ||| ||||||||||||||| ||| |||| | ||||  |||  ||||||||||||||||||||||| | | | | ||||||| ||||||| ||    
T  8879544 tttaacgtcagggactaaagtgataacagaaatgcacattcaggaactactttgtatttaatcctgagtcaggaagcttttatgacagctaggtgcagag 8879643  T
Q  132 tcagggac 139  Q
    ||||||||    
T  8879644 tcagggac 8879651  T

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Target: chr7; HSP #39
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 33 - 99
Target Start/End: Original strand, 25621722 - 25621788
Alignment:
Q  33 tttaacgacagagactaaagtgataacggaagtgcagagtcagagacttatttgtatttaatcctga 99  Q
    ||||||| ||| ||||||||||||||| |||||||| | ||| | ||| ||||||||||||||||||    
T  25621722 tttaacgtcagtgactaaagtgataacagaagtgcacattcaaaaactaatttgtatttaatcctga 25621788  T

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Target: chr7; HSP #40
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 45 - 123
Target Start/End: Original strand, 34888936 - 34889014
Alignment:
Q  45 gactaaagtgataacggaagtgcagagtcagagacttatttgtatttaatcctgagtcagggatctatgtgacagcgag 123  Q
    |||||||||||||||||||||||||||| |  ||| | ||| ||||||||| ||||| || || || ||||||||||||    
T  34888936 gactaaagtgataacggaagtgcagagttaaggacatctttatatttaatcatgagtgagagacctttgtgacagcgag 34889014  T

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Target: chr7; HSP #41
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 35 - 120
Target Start/End: Original strand, 24288869 - 24288954
Alignment:
Q  35 taacgacagagactaaagtgataacggaagtgcagagtcagagacttatttgtatttaatcctgagtcagggatctatgtgacagc 120  Q
    ||||| |||||| ||||||||||| ||||||||| | |||  ||||  |||||| |||||||||||| || ||||| |||||||||    
T  24288869 taacgccagagaataaagtgataatggaagtgcacattcaaggactactttgtaattaatcctgagttagagatctttgtgacagc 24288954  T

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Target: chr7; HSP #42
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 48 - 126
Target Start/End: Original strand, 7509487 - 7509565
Alignment:
Q  48 taaagtgataacggaagtgcagagtcagagacttatttgtatttaatcctgagtcagggatctatgtgacagcgaggtg 126  Q
    |||||| |||||||||||||||| || ||||||| ||| ||||||||| ||| |||  || || ||||||| |||||||    
T  7509487 taaagtaataacggaagtgcagaatctgagacttctttatatttaatcatgaatcaaagacctttgtgacaacgaggtg 7509565  T

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Target: chr7; HSP #43
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 83 - 158
Target Start/End: Complemental strand, 24934876 - 24934799
Alignment:
Q  83 tttgtatttaatcctgagtcagggatctatgtgacagcgaggtgcacagtcagggactaaagtga--atttactcaaa 158  Q
    ||||||||||||||| |||||| || || |||||||||||  |||| ||| |||||| |||||||  |||||||||||    
T  24934876 tttgtatttaatcctaagtcagagacctttgtgacagcgatatgcagagttagggaccaaagtgaccatttactcaaa 24934799  T

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Target: chr7; HSP #44
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 41 - 127
Target Start/End: Complemental strand, 27067896 - 27067811
Alignment:
Q  41 cagagactaaagtgataacggaagtgcagagtcagagacttatttgtatttaatcctgagtcagggatctatgtgacagcgaggtgc 127  Q
    |||||||||||||||||| | ||||||| | |||| ||||  ||||  |||||||| ||||||| ||||| | ||||||||||||||    
T  27067896 cagagactaaagtgataatgaaagtgcacattcagggactactttgcttttaatcc-gagtcagagatctttatgacagcgaggtgc 27067811  T

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Target: chr7; HSP #45
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 41 - 127
Target Start/End: Original strand, 27210417 - 27210502
Alignment:
Q  41 cagagactaaagtgataacggaagtgcagagtcagagacttatttgtatttaatcctgagtcagggatctatgtgacagcgaggtgc 127  Q
    |||||||||||||||||| | ||||||| | |||| ||||  ||||  |||||||| ||||||| ||||| | ||||||||||||||    
T  27210417 cagagactaaagtgataatgaaagtgcacattcagggactactttgcttttaatcc-gagtcagagatctttatgacagcgaggtgc 27210502  T

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Target: chr7; HSP #46
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 33 - 66
Target Start/End: Complemental strand, 33060932 - 33060899
Alignment:
Q  33 tttaacgacagagactaaagtgataacggaagtg 66  Q
    ||||||| ||||||||||||||||||||||||||    
T  33060932 tttaacgtcagagactaaagtgataacggaagtg 33060899  T

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Target: chr7; HSP #47
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 156 - 228
Target Start/End: Original strand, 5082481 - 5082552
Alignment:
Q  156 aaactaaaagtaataattttgcacccggaaattattactttttaacttttagaaagttgaattcaacattttt 228  Q
    |||||||||||| || |||||||   ||||||||  ||||||| ||||||| |||||||||||||||| ||||    
T  5082481 aaactaaaagtagtagttttgcatt-ggaaattacaactttttgacttttaaaaagttgaattcaacactttt 5082552  T

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Target: chr2 (Bit Score: 91; Significance: 5e-44; HSPs: 42)
Name: chr2
Description:

Target: chr2; HSP #1
Raw Score: 91; E-Value: 5e-44
Query Start/End: Original strand, 33 - 147
Target Start/End: Original strand, 31091528 - 31091642
Alignment:
Q  33 tttaacgacagagactaaagtgataacggaagtgcagagtcagagacttatttgtatttaatcctgagtcagggatctatgtgacagcgaggtgcacagt 132  Q
    ||||||| ||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||| |||||||||||| ||||||| |||    
T  31091528 tttaacgtcagagactaaagtgataacggaagtgcagagtcagggacttatttgtatttaatcctgagtcagggacctatgtgacagcaaggtgcagagt 31091627  T
Q  133 cagggactaaagtga 147  Q
    ||||||| |||||||    
T  31091628 cagggaccaaagtga 31091642  T

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Target: chr2; HSP #2
Raw Score: 83; E-Value: 3e-39
Query Start/End: Original strand, 45 - 147
Target Start/End: Original strand, 32766252 - 32766354
Alignment:
Q  45 gactaaagtgataacggaagtgcagagtcagagacttatttgtatttaatcctgagtcagggatctatgtgacagcgaggtgcacagtcagggactaaag 144  Q
    ||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||| |||||||||| ||||||||| |||||||||| ||||    
T  32766252 gactaaagtgataacggaagtgcagagtcagggacttatttgtatttaatcctgagtcagggacctatgtgacaacgaggtgcagagtcagggaccaaag 32766351  T
Q  145 tga 147  Q
    |||    
T  32766352 tga 32766354  T

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Target: chr2; HSP #3
Raw Score: 75; E-Value: 2e-34
Query Start/End: Original strand, 33 - 147
Target Start/End: Complemental strand, 2910222 - 2910108
Alignment:
Q  33 tttaacgacagagactaaagtgataacggaagtgcagagtcagagacttatttgtatttaatcctgagtcagggatctatgtgacagcgaggtgcacagt 132  Q
    ||||||| ||| ||||||||||| || ||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||| |||| | |    
T  2910222 tttaacgtcagggactaaagtgacaaaggaagtgcagagtcagagacttatttgtatttaatcccgagtcagggatctatgtgacagcgagctgcaaaat 2910123  T
Q  133 cagggactaaagtga 147  Q
    ||  |||||||||||    
T  2910122 caaagactaaagtga 2910108  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #4
Raw Score: 74; E-Value: 6e-34
Query Start/End: Original strand, 34 - 147
Target Start/End: Original strand, 40000336 - 40000449
Alignment:
Q  34 ttaacgacagagactaaagtgataacggaagtgcagagtcagagacttatttgtatttaatcctgagtcagggatctatgtgacagcgaggtgcacagtc 133  Q
    |||||| ||| || |||||||||||||||||||||| || |||||||||||||||||||||||| | |||||||||||||| ||||||||||||| ||||    
T  40000336 ttaacgtcagggaataaagtgataacggaagtgcagggttagagacttatttgtatttaatcctcaatcagggatctatgtaacagcgaggtgcagagtc 40000435  T
Q  134 agggactaaagtga 147  Q
    |||||| |||||||    
T  40000436 agggaccaaagtga 40000449  T

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Target: chr2; HSP #5
Raw Score: 72; E-Value: 1e-32
Query Start/End: Original strand, 45 - 144
Target Start/End: Original strand, 17330243 - 17330342
Alignment:
Q  45 gactaaagtgataacggaagtgcagagtcagagacttatttgtatttaatcctgagtcagggatctatgtgacagcgaggtgcacagtcagggactaaag 144  Q
    ||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||| ||||||||||| ||| |||| | ||| |||||||||    
T  17330243 gactaaagtgataacggaaatgcagagtcagagacttatttgtatttaatcctgagtcagggacctatgtgacagtgagctgcagaatcaaggactaaag 17330342  T

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Target: chr2; HSP #6
Raw Score: 72; E-Value: 1e-32
Query Start/End: Original strand, 11 - 143
Target Start/End: Complemental strand, 31090308 - 31090176
Alignment:
Q  11 acctcatcacttaacnnnnnnntttaacgacagagactaaagtgataacggaagtgcagagtcagagacttatttgtatttaatcctgagtcagggatct 110  Q
    |||||||||||||||       ||||||| ||| ||||||| | ||||||||||||||||||||||||||||||| ||||||||||||||||| ||| ||    
T  31090308 acctcatcacttaacatatttttttaacgtcagggactaaaatcataacggaagtgcagagtcagagacttatttatatttaatcctgagtcaaggacct 31090209  T
Q  111 atgtgacagcgaggtgcacagtcagggactaaa 143  Q
    ||||||||||||| |||| | ||||||||||||    
T  31090208 atgtgacagcgagctgcagaatcagggactaaa 31090176  T

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Target: chr2; HSP #7
Raw Score: 71; E-Value: 4e-32
Query Start/End: Original strand, 45 - 147
Target Start/End: Original strand, 24459459 - 24459561
Alignment:
Q  45 gactaaagtgataacggaagtgcagagtcagagacttatttgtatttaatcctgagtcagggatctatgtgacagcgaggtgcacagtcagggactaaag 144  Q
    ||||||||||||||  ||||||||| ||||||||||||||||||||||||||||| ||||||| ||||||||||||||| |||| |||||||||| ||||    
T  24459459 gactaaagtgataatagaagtgcagggtcagagacttatttgtatttaatcctgattcagggacctatgtgacagcgagatgcagagtcagggaccaaag 24459558  T
Q  145 tga 147  Q
    |||    
T  24459559 tga 24459561  T

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Target: chr2; HSP #8
Raw Score: 67; E-Value: 1e-29
Query Start/End: Original strand, 44 - 134
Target Start/End: Original strand, 17466840 - 17466930
Alignment:
Q  44 agactaaagtgataacggaagtgcagagtcagagacttatttgtatttaatcctgagtcagggatctatgtgacagcgaggtgcacagtca 134  Q
    |||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||| |   ||||||||||||||||||| |||||    
T  17466840 agactaaagtgataacggaagtgcagagtcagagacttctttgtatttaatcctgagtcagcggcttatgtgacagcgaggtgcagagtca 17466930  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #9
Raw Score: 67; E-Value: 1e-29
Query Start/End: Original strand, 33 - 147
Target Start/End: Complemental strand, 24458182 - 24458068
Alignment:
Q  33 tttaacgacagagactaaagtgataacggaagtgcagagtcagagacttatttgtatttaatcctgagtcagggatctatgtgacagcgaggtgcacagt 132  Q
    |||||||  ||||||||||||||||||| ||||| ||||||||| |||||||||||||||||  ||||||||||| |||||||| |||||| |||| | |    
T  24458182 tttaacgttagagactaaagtgataacgaaagtgtagagtcagaaacttatttgtatttaattttgagtcagggacctatgtgatagcgagctgcataat 24458083  T
Q  133 cagggactaaagtga 147  Q
    |||||||||||||||    
T  24458082 cagggactaaagtga 24458068  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #10
Raw Score: 67; E-Value: 1e-29
Query Start/End: Original strand, 33 - 147
Target Start/End: Complemental strand, 32765060 - 32764946
Alignment:
Q  33 tttaacgacagagactaaagtgataacggaagtgcagagtcagagacttatttgtatttaatcctgagtcagggatctatgtgacagcgaggtgcacagt 132  Q
    ||||||| ||| || |||||||||||||||||||||||||||| |||||||||||||||||||||||||||| || |||| ||||| | || |||| | |    
T  32765060 tttaacgtcagggattaaagtgataacggaagtgcagagtcagggacttatttgtatttaatcctgagtcagagacctatatgacaactagctgcagaat 32764961  T
Q  133 cagggactaaagtga 147  Q
    |||||||||||||||    
T  32764960 cagggactaaagtga 32764946  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #11
Raw Score: 67; E-Value: 1e-29
Query Start/End: Original strand, 33 - 147
Target Start/End: Complemental strand, 39015127 - 39015013
Alignment:
Q  33 tttaacgacagagactaaagtgataacggaagtgcagagtcagagacttatttgtatttaatcctgagtcagggatctatgtgacagcgaggtgcacagt 132  Q
    |||||||  ||| |||||| |||||| | ||||||||||||| |||| ||||||||||||||||||||||| ||||||||||| |||||||||||| |||    
T  39015127 tttaacgttagaaactaaaatgataatgaaagtgcagagtcaaagacgtatttgtatttaatcctgagtcaaggatctatgtggcagcgaggtgcagagt 39015028  T
Q  133 cagggactaaagtga 147  Q
    ||||||| |||||||    
T  39015027 cagggacaaaagtga 39015013  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #12
Raw Score: 62; E-Value: 9e-27
Query Start/End: Original strand, 46 - 147
Target Start/End: Original strand, 34037687 - 34037788
Alignment:
Q  46 actaaagtgataacggaagtgcagagtcagagacttatttgtatttaatcctgagtcagggatctatgtgacagcgaggtgcacagtcagggactaaagt 145  Q
    |||||||||||||| |||||||||||||| |||||||||||||||||||||||||| | ||| || | ||||||| ||||||| ||||| ||||||||||    
T  34037687 actaaagtgataacagaagtgcagagtcatagacttatttgtatttaatcctgagttatggacctttatgacagcaaggtgcagagtcaaggactaaagt 34037786  T
Q  146 ga 147  Q
    ||    
T  34037787 ga 34037788  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #13
Raw Score: 61; E-Value: 4e-26
Query Start/End: Original strand, 33 - 113
Target Start/End: Complemental strand, 14704128 - 14704048
Alignment:
Q  33 tttaacgacagagactaaagtgataacggaagtgcagagtcagagacttatttgtatttaatcctgagtcagggatctatg 113  Q
    ||||||| ||| |||||||||||||||||||||||||||| || ||||||||||||||||||||||||||||||| |||||    
T  14704128 tttaacgtcagggactaaagtgataacggaagtgcagagtgagggacttatttgtatttaatcctgagtcagggacctatg 14704048  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #14
Raw Score: 61; E-Value: 4e-26
Query Start/End: Original strand, 33 - 147
Target Start/End: Original strand, 39016384 - 39016496
Alignment:
Q  33 tttaacgacagagactaaagtgataacggaagtgcagagtcagagacttatttgtatttaatcctgagtc--agggatctatgtgacagcgaggtgcaca 130  Q
    ||||||| ||||||||||||||||||||||||||||||||    ||||||||||||||||||||||||||  || ||| |||||||||||||| |||| |    
T  39016384 tttaacgtcagagactaaagtgataacggaagtgcagagt----gacttatttgtatttaatcctgagtcagagagatgtatgtgacagcgagctgcaga 39016479  T
Q  131 gtcagggactaaagtga 147  Q
     |||| |||||||||||    
T  39016480 atcagagactaaagtga 39016496  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #15
Raw Score: 55; E-Value: 1e-22
Query Start/End: Original strand, 46 - 147
Target Start/End: Original strand, 21733785 - 21733889
Alignment:
Q  46 actaaagtgataacggaagtgcagagtcagagacttatttgtatttaatc---ctgagtcagggatctatgtgacagcgaggtgcacagtcagggactaa 142  Q
    ||||||||||| ||||||||||||||||||||||||||||||||||||||    ||||||||||| || ||||||| ||| || || ||||||||||||     
T  21733785 actaaagtgatgacggaagtgcagagtcagagacttatttgtatttaatcatgatgagtcagggacctttgtgacaacgatgtacaaagtcagggactag 21733884  T
Q  143 agtga 147  Q
    |||||    
T  21733885 agtga 21733889  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #16
Raw Score: 54; E-Value: 5e-22
Query Start/End: Original strand, 34 - 119
Target Start/End: Complemental strand, 7073760 - 7073675
Alignment:
Q  34 ttaacgacagagactaaagtgataacggaagtgcagagtcagagacttatttgtatttaatcctgagtcagggatctatgtgacag 119  Q
    |||||| ||| |||||||||||||||||||||||||| ||||||||||||||||||||||||| || |||| || ||||| |||||    
T  7073760 ttaacgtcagggactaaagtgataacggaagtgcagaatcagagacttatttgtatttaatcccgaatcagagacctatgcgacag 7073675  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #17
Raw Score: 52; E-Value: 9e-21
Query Start/End: Original strand, 52 - 147
Target Start/End: Original strand, 5915012 - 5915107
Alignment:
Q  52 gtgataacggaagtgcagagtcagagacttatttgtatttaatcctgagtcagggatctatgtgacagcgaggtgcacagtcagggactaaagtga 147  Q
    ||||||||||||||||||||| || ||||| |||||||||||| ||||||||  || |||| ||| ||||||||||| ||||| ||||||||||||    
T  5915012 gtgataacggaagtgcagagttagtgacttctttgtatttaattctgagtcaaagacctatttgaaagcgaggtgcagagtcatggactaaagtga 5915107  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #18
Raw Score: 52; E-Value: 9e-21
Query Start/End: Original strand, 192 - 263
Target Start/End: Complemental strand, 7888643 - 7888572
Alignment:
Q  192 actttttaacttttagaaagttgaattcaacatttttcaccatttttcaagaaattatttctatttatgttc 263  Q
    ||||||| ||||||| ||| || ||||||||| |||||||||||||||||||||||||||||||||||||||    
T  7888643 acttttttacttttataaaattaaattcaacacttttcaccatttttcaagaaattatttctatttatgttc 7888572  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #19
Raw Score: 51; E-Value: 3e-20
Query Start/End: Original strand, 33 - 147
Target Start/End: Original strand, 34582671 - 34582785
Alignment:
Q  33 tttaacgacagagactaaagtgataacggaagtgcagagtcagagacttatttgtatttaatcctgagtcagggatctatgtgacagcgaggtgcacagt 132  Q
    ||||||| ||| |||||||||||||||||||||||| | |||| ||||  |||||||||||||| ||||||  || || ||| ||||| ||||||| |||    
T  34582671 tttaacgtcagggactaaagtgataacggaagtgcacattcagggactactttgtatttaatcccgagtcaatgacctttgtaacagcaaggtgcagagt 34582770  T
Q  133 cagggactaaagtga 147  Q
    |||||||||| ||||    
T  34582771 cagggactaacgtga 34582785  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #20
Raw Score: 50; E-Value: 1e-19
Query Start/End: Original strand, 45 - 146
Target Start/End: Original strand, 38985002 - 38985103
Alignment:
Q  45 gactaaagtgataacggaagtgcagagtcagagacttatttgtatttaatcctgagtcagggatctatgtgacagcgaggtgcacagtcagggactaaag 144  Q
    ||||||||||||||||||||||||||||||  ||||| |||||||||||| | ||||||   |||| |||||||| |||||||| ||| |||| ||||||    
T  38985002 gactaaagtgataacggaagtgcagagtcaaggacttctttgtatttaattccgagtcataaatctttgtgacagtgaggtgcaaagttaggggctaaag 38985101  T
Q  145 tg 146  Q
    ||    
T  38985102 tg 38985103  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #21
Raw Score: 49; E-Value: 5e-19
Query Start/End: Original strand, 200 - 276
Target Start/End: Original strand, 10824259 - 10824334
Alignment:
Q  200 acttttagaaagttgaattcaacatttttcaccatttttcaagaaattatttctatttatgttcctcttaaccaatg 276  Q
    |||||||||||||| ||||||||||||||||||| ||| ||| ||||||||| |||||||||| |||||||||||||    
T  10824259 acttttagaaagttaaattcaacatttttcaccactttccaacaaattatttttatttatgtt-ctcttaaccaatg 10824334  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #22
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 202 - 294
Target Start/End: Complemental strand, 803980 - 803889
Alignment:
Q  202 ttttagaaagttgaattcaacatttttcaccatttttcaagaaattatttctatttatgttcctcttaaccaatgcacaaaggacactcttta 294  Q
    ||||||||| |||||||||| | ||||||||| ||||||| ||||||||| |||||||||| |||||||||||||| | || | |||||||||    
T  803980 ttttagaaatttgaattcaatacttttcaccacttttcaacaaattatttttatttatgtt-ctcttaaccaatgctccaatggcactcttta 803889  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #23
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 45 - 125
Target Start/End: Complemental strand, 7412202 - 7412122
Alignment:
Q  45 gactaaagtgataacggaagtgcagagtcagagacttatttgtatttaatcctgagtcagggatctatgtgacagcgaggt 125  Q
    ||||||||||||||||||||||||   |||| ||||| ||| ||||||||| |||||||| ||||||||||||| ||||||    
T  7412202 gactaaagtgataacggaagtgcactatcagtgacttctttatatttaatcttgagtcagagatctatgtgacaacgaggt 7412122  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #24
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 46 - 128
Target Start/End: Original strand, 2911505 - 2911587
Alignment:
Q  46 actaaagtgataacggaagtgcagagtcagagacttatttgtatttaatcctgagtcagggatctatgtgacagcgaggtgca 128  Q
    ||||||||||||||||||||||| |||||||||||||||| |||||||   ||||||| ||   |||||||||||||| ||||    
T  2911505 actaaagtgataacggaagtgcaaagtcagagacttatttatatttaactttgagtcatggccttatgtgacagcgagctgca 2911587  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #25
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 45 - 103
Target Start/End: Complemental strand, 17466151 - 17466093
Alignment:
Q  45 gactaaagtgataacggaagtgcagagtcagagacttatttgtatttaatcctgagtca 103  Q
    ||||||||||| ||||||||||||||||||||||  | |||||||||||||||||||||    
T  17466151 gactaaagtgaaaacggaagtgcagagtcagagatatctttgtatttaatcctgagtca 17466093  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #26
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 45 - 161
Target Start/End: Original strand, 12746214 - 12746332
Alignment:
Q  45 gactaaagtgataacggaagtgcagagtcagagacttatttgtatttaatcctgagtcagggatctatgtgacagcgaggtgcacagtcagggactaaag 144  Q
    |||||||||||||||||||| ||| | ||||  |||  ||||||||||||||||||||||| | || |  ||| |||||||||| ||||| | || ||||    
T  12746214 gactaaagtgataacggaagggcacattcaggaactactttgtatttaatcctgagtcaggaacctttaagactgcgaggtgcagagtcaagaaccaaag 12746313  T
Q  145 tga--atttactcaaacta 161  Q
    |||  ||||||||||||||    
T  12746314 tgaccatttactcaaacta 12746332  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #27
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 33 - 104
Target Start/End: Original strand, 26586296 - 26586367
Alignment:
Q  33 tttaacgacagagactaaagtgataacggaagtgcagagtcagagacttatttgtatttaatcctgagtcag 104  Q
    ||||||| |||||||||||||||||||||||||||| | ||| |||||  ||| ||||||||| ||||||||    
T  26586296 tttaacgccagagactaaagtgataacggaagtgcacattcaaagactactttatatttaatcttgagtcag 26586367  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #28
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 45 - 104
Target Start/End: Original strand, 31814357 - 31814416
Alignment:
Q  45 gactaaagtgataacggaagtgcagagtcagagacttatttgtatttaatcctgagtcag 104  Q
    |||||||||||||||||||||||||||||| | |||| ||| |||||||| |||||||||    
T  31814357 gactaaagtgataacggaagtgcagagtcaaaaacttctttatatttaattctgagtcag 31814416  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #29
Raw Score: 39; E-Value: 0.0000000000005
Query Start/End: Original strand, 42 - 124
Target Start/End: Original strand, 15441981 - 15442063
Alignment:
Q  42 agagactaaagtgataacggaagtgcagagtcagagacttatttgtatttaatcctgagtcagggatctatgtgacagcgagg 124  Q
    |||||||||||||||||   ||||||| | |||  ||||  ||||||||||||||||||||||| |||| |||||||||||||    
T  15441981 agagactaaagtgataataaaagtgcacattcaaggactactttgtatttaatcctgagtcaggaatctttgtgacagcgagg 15442063  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #30
Raw Score: 39; E-Value: 0.0000000000005
Query Start/End: Original strand, 33 - 147
Target Start/End: Complemental strand, 38853877 - 38853763
Alignment:
Q  33 tttaacgacagagactaaagtgataacggaagtgcagagtcagagacttatttgtatttaatcctgagtcagggatctatgtgacagcgaggtgcacagt 132  Q
    ||||||| ||| ||||||| |||||||||||||||| | | || ||||  |||||||||||||||||||||| || || | |||||  || ||| | |||    
T  38853877 tttaacgtcagtgactaaattgataacggaagtgcacatttagggactactttgtatttaatcctgagtcagagacctttatgacaatgaagtgtagagt 38853778  T
Q  133 cagggactaaagtga 147  Q
    ||||||| |||||||    
T  38853777 cagggaccaaagtga 38853763  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #31
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 46 - 136
Target Start/End: Complemental strand, 21732216 - 21732131
Alignment:
Q  46 actaaagtgataacggaagtgcagagtcagagacttatttgtatttaatcctgagtcagggatctatgtgacagcgaggtgcacagtcagg 136  Q
    |||||||| ||||||||||| ||||||||   |||||||||||||||||||||||||  ||| || ||||| | ||||||||| |||||||    
T  21732216 actaaagtaataacggaagtacagagtca---acttatttgtatttaatcctgagtc--ggacctttgtgataacgaggtgcaaagtcagg 21732131  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #32
Raw Score: 37; E-Value: 0.000000000008
Query Start/End: Original strand, 47 - 135
Target Start/End: Complemental strand, 5914412 - 5914324
Alignment:
Q  47 ctaaagtgataacggaagtgcagagtcagagacttatttgtatttaatcctgagtcagggatctatgtgacagcgaggtgcacagtcag 135  Q
    ||||||||||||||| |||||| |||||  ||||| ||||||||||||  |||||||| || |||| | ||| ||||||||| ||||||    
T  5914412 ctaaagtgataacgggagtgcaaagtcactgacttctttgtatttaattgtgagtcagagacctatatcacaacgaggtgcaaagtcag 5914324  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #33
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 192 - 238
Target Start/End: Original strand, 445602 - 445648
Alignment:
Q  192 actttttaacttttagaaagttgaattcaacatttttcaccattttt 238  Q
    ||||||| |||||||| ||||||||||||||| ||||||||||||||    
T  445602 actttttgacttttaggaagttgaattcaacacttttcaccattttt 445648  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #34
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 45 - 147
Target Start/End: Complemental strand, 8420123 - 8420021
Alignment:
Q  45 gactaaagtgataacggaagtgcagagtcagagacttatttgtatttaatcctgagtcagggatctatgtgacagcgaggtgcacagtcagggactaaag 144  Q
    ||||||| ||||||| |||||||| | |||| ||||  ||||||||||||| ||| |||||||  | |||||| ||||  |||| |||||||||| ||||    
T  8420123 gactaaactgataacagaagtgcacattcagggactactttgtatttaatcttgactcagggacatttgtgaccgcgaaatgcagagtcagggaccaaag 8420024  T
Q  145 tga 147  Q
    |||    
T  8420023 tga 8420021  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #35
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 45 - 123
Target Start/End: Complemental strand, 33161877 - 33161799
Alignment:
Q  45 gactaaagtgataacggaagtgcagagtcagagacttatttgtatttaatcctgagtcagggatctatgtgacagcgag 123  Q
    ||||||||||||||||||||| || |||| ||||||| |||| |||||||||| || ||| || || ||||||| ||||    
T  33161877 gactaaagtgataacggaagtacatagtctgagacttctttgcatttaatcctaaggcagagacctttgtgacaacgag 33161799  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #36
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 192 - 276
Target Start/End: Complemental strand, 6975919 - 6975837
Alignment:
Q  192 actttttaacttttagaaagttgaattcaacatttttcaccatttttcaagaaattatttctatttatgttcctcttaaccaatg 276  Q
    |||||| ||||| |||| ||||||||||||||||||||||||  |||||| | ||||||| ||||| |||| |||||| ||||||    
T  6975919 acttttaaacttctagagagttgaattcaacatttttcacca-ctttcaacatattatttttatttttgtt-ctcttagccaatg 6975837  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #37
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 89 - 158
Target Start/End: Original strand, 14887555 - 14887626
Alignment:
Q  89 tttaatcctgagtcagggatctatgtgacagcgaggtgcacagtcagggactaaagtga--atttactcaaa 158  Q
    ||||||||||||||||||| ||  |||||||||||||||| |||  ||||| |||||||  |||||||||||    
T  14887555 tttaatcctgagtcagggaccttcgtgacagcgaggtgcagagtttgggaccaaagtgaccatttactcaaa 14887626  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #38
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 36 - 147
Target Start/End: Original strand, 33163462 - 33163574
Alignment:
Q  36 aacgacagagactaaagtgataacggaagtgcagagtcagagac-ttatttgtatttaatcctgagtcagggatctatgtgacagcgaggtgcacagtca 134  Q
    |||| ||||||||||||||||||||||| |||| ||||| | || || ||||||||||||  |||||||| || || || |||| || |||| | |||||    
T  33163462 aacgtcagagactaaagtgataacggaaatgcatagtcaaatactttttttgtatttaattatgagtcagagaactttgcgacaacgtggtgtagagtca 33163561  T
Q  135 gggactaaagtga 147  Q
      |||||||||||    
T  33163562 aagactaaagtga 33163574  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #39
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 195 - 241
Target Start/End: Original strand, 33726405 - 33726451
Alignment:
Q  195 ttttaacttttagaaagttgaattcaacatttttcaccatttttcaa 241  Q
    ||||||||||||||||||| |||| |  |||||||||||||||||||    
T  33726405 ttttaacttttagaaagttaaatttattatttttcaccatttttcaa 33726451  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #40
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 195 - 240
Target Start/End: Original strand, 2239607 - 2239652
Alignment:
Q  195 ttttaacttttagaaagttgaattcaacatttttcaccatttttca 240  Q
    |||||||||||| |||||| |||||| ||||||| |||||||||||    
T  2239607 ttttaacttttaaaaagttaaattcatcattttttaccatttttca 2239652  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #41
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 45 - 126
Target Start/End: Complemental strand, 11985801 - 11985720
Alignment:
Q  45 gactaaagtgataacggaagtgcagagtcagagacttatttgtatttaatcctgagtcagggatctatgtgacagcgaggtg 126  Q
    ||||||| |||||||| || ||||   |||||||||  |||||||||||||||||||||| || || | | |||||||||||    
T  11985801 gactaaactgataacgaaaatgcaccttcagagactactttgtatttaatcctgagtcagagacctttataacagcgaggtg 11985720  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #42
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 46 - 118
Target Start/End: Complemental strand, 43380689 - 43380617
Alignment:
Q  46 actaaagtgataacggaagtgcagagtcagagacttatttgtatttaatcctgagtcagggatctatgtgaca 118  Q
    ||||||||||||||  ||  ||| |||||||||||| | ||||||||||| |||||||| || || |||||||    
T  43380689 actaaagtgataacataaacgcacagtcagagacttctatgtatttaatcatgagtcagagacctttgtgaca 43380617  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8 (Bit Score: 83; Significance: 3e-39; HSPs: 38)
Name: chr8
Description:

Target: chr8; HSP #1
Raw Score: 83; E-Value: 3e-39
Query Start/End: Original strand, 33 - 147
Target Start/End: Original strand, 32898446 - 32898560
Alignment:
Q  33 tttaacgacagagactaaagtgataacggaagtgcagagtcagagacttatttgtatttaatcctgagtcagggatctatgtgacagcgaggtgcacagt 132  Q
    ||||||| ||| ||||||||||||||||||||||||||||||| ||||||||||||||||||||| ||||||||| ||||||||||| ||| |||| |||    
T  32898446 tttaacgtcagggactaaagtgataacggaagtgcagagtcagggacttatttgtatttaatcctaagtcagggacctatgtgacagtgagttgcagagt 32898545  T
Q  133 cagggactaaagtga 147  Q
    |||||||||||||||    
T  32898546 cagggactaaagtga 32898560  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #2
Raw Score: 75; E-Value: 2e-34
Query Start/End: Original strand, 33 - 143
Target Start/End: Complemental strand, 35177517 - 35177407
Alignment:
Q  33 tttaacgacagagactaaagtgataacggaagtgcagagtcagagacttatttgtatttaatcctgagtcagggatctatgtgacagcgaggtgcacagt 132  Q
    ||||||| ||| ||||||||||||||||||||||||||||||| |||||||||||||||||||| |||||||||| ||||||||||||||| |||| | |    
T  35177517 tttaacgtcagggactaaagtgataacggaagtgcagagtcagggacttatttgtatttaatccggagtcagggacctatgtgacagcgagctgcagaat 35177418  T
Q  133 cagggactaaa 143  Q
     ||||||||||    
T  35177417 tagggactaaa 35177407  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #3
Raw Score: 75; E-Value: 2e-34
Query Start/End: Original strand, 33 - 147
Target Start/End: Original strand, 35178805 - 35178919
Alignment:
Q  33 tttaacgacagagactaaagtgataacggaagtgcagagtcagagacttatttgtatttaatcctgagtcagggatctatgtgacagcgaggtgcacagt 132  Q
    ||||||| ||| |||||||||||||||||||||||||| |||| ||||||||||||||||||||||||||||||| | || ||||||||| ||||| |||    
T  35178805 tttaacgtcagggactaaagtgataacggaagtgcagaatcagggacttatttgtatttaatcctgagtcagggaccaatatgacagcgatgtgcagagt 35178904  T
Q  133 cagggactaaagtga 147  Q
    ||||||| |||||||    
T  35178905 cagggaccaaagtga 35178919  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #4
Raw Score: 67; E-Value: 1e-29
Query Start/End: Original strand, 33 - 147
Target Start/End: Original strand, 1952971 - 1953084
Alignment:
Q  33 tttaacgacagagactaaagtgataacggaagtgcagagtcagagacttatttgtatttaatcctgagtcagggatctatgtgacagcgaggtgcacagt 132  Q
    ||||||| ||||||||||||||||||||||||| |||||||| |||||||||||||| ||||||| |||||| ||||||| ||||| |||| |||| | |    
T  1952971 tttaacgtcagagactaaagtgataacggaagtacagagtcatagacttatttgtatgtaatcct-agtcagagatctatatgacaacgagctgcagaat 1953069  T
Q  133 cagggactaaagtga 147  Q
    |||||||||||||||    
T  1953070 cagggactaaagtga 1953084  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #5
Raw Score: 66; E-Value: 4e-29
Query Start/End: Original strand, 33 - 126
Target Start/End: Original strand, 5965443 - 5965536
Alignment:
Q  33 tttaacgacagagactaaagtgataacggaagtgcagagtcagagacttatttgtatttaatcctgagtcagggatctatgtgacagcgaggtg 126  Q
    ||||||| |||||||||||||||||||||||||||||||||| |||||| |||||||||||||||||||||||||  | ||||||| |||||||    
T  5965443 tttaacgtcagagactaaagtgataacggaagtgcagagtcaaagacttctttgtatttaatcctgagtcagggacatttgtgacaacgaggtg 5965536  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #6
Raw Score: 62; E-Value: 9e-27
Query Start/End: Original strand, 183 - 276
Target Start/End: Original strand, 43819551 - 43819643
Alignment:
Q  183 gaaattattactttttaacttttagaaagttgaattcaacatttttcaccatttttcaagaaattatttctatttatgttcctcttaaccaatg 276  Q
    |||||||  ||||||| ||||||||||||||||||||||||||||||| |||||||||| |||||||||||||| ||||| |||||||||||||    
T  43819551 gaaattacaactttttgacttttagaaagttgaattcaacatttttcatcatttttcaacaaattatttctattcatgtt-ctcttaaccaatg 43819643  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #7
Raw Score: 59; E-Value: 6e-25
Query Start/End: Original strand, 156 - 274
Target Start/End: Original strand, 7207194 - 7207310
Alignment:
Q  156 aaactaaaagtaataattttgcacccggaaattattactttttaacttttagaaagttgaattcaacatttttcaccatttttcaagaaattatttctat 255  Q
    |||||||||||| ||||||||||   |||| |||  ||||||||||||||||||| |||||||||||| |||||| |||||||||| ||||||||| |||    
T  7207194 aaactaaaagtagtaattttgcattgggaa-ttacaactttttaacttttagaaatttgaattcaacacttttcatcatttttcaacaaattatttatat 7207292  T
Q  256 ttatgttcctcttaaccaa 274  Q
    ||||||| |||||||||||    
T  7207293 ttatgtt-ctcttaaccaa 7207310  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #8
Raw Score: 58; E-Value: 2e-24
Query Start/End: Original strand, 47 - 128
Target Start/End: Original strand, 41754810 - 41754891
Alignment:
Q  47 ctaaagtgataacggaagtgcagagtcagagacttatttgtatttaatcctgagtcagggatctatgtgacagcgaggtgca 128  Q
    ||||||| |||||||||||| ||||||||  |||| |||||||||||||||||||||| |||||||||||||||||||||||    
T  41754810 ctaaagtaataacggaagtgtagagtcaggaacttgtttgtatttaatcctgagtcagagatctatgtgacagcgaggtgca 41754891  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #9
Raw Score: 55; E-Value: 1e-22
Query Start/End: Original strand, 192 - 294
Target Start/End: Original strand, 24066973 - 24067074
Alignment:
Q  192 actttttaacttttagaaagttgaattcaacatttttcaccatttttcaagaaattatttctatttatgttcctcttaaccaatgcacaaaggacactct 291  Q
    |||||||||||||||||| ||||||||||||| ||||||||||||  ||| ||||||||| ||||||||||  ||||||| ||||| | |||||||||||    
T  24066973 actttttaacttttagaaggttgaattcaacacttttcaccatttcccaacaaattatttatatttatgtt-ttcttaacaaatgccccaaggacactct 24067071  T
Q  292 tta 294  Q
    |||    
T  24067072 tta 24067074  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #10
Raw Score: 52; E-Value: 9e-21
Query Start/End: Original strand, 48 - 147
Target Start/End: Complemental strand, 30134673 - 30134574
Alignment:
Q  48 taaagtgataacggaagtgcagagtcagagacttatttgtatttaatcctgagtcagggatctatgtgacagcgaggtgcacagtcagggactaaagtga 147  Q
    |||||||||||| |||||||||||||| | |||| ||||||||||||| |||||  |||| || ||||||||||||||||| ||| | ||||||||||||    
T  30134673 taaagtgataacagaagtgcagagtcacacacttctttgtatttaatcatgagtaggggacctttgtgacagcgaggtgcagagttaaggactaaagtga 30134574  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #11
Raw Score: 52; E-Value: 9e-21
Query Start/End: Original strand, 56 - 147
Target Start/End: Complemental strand, 41754097 - 41754006
Alignment:
Q  56 taacggaagtgcagagtcagagacttatttgtatttaatcctgagtcagggatctatgtgacagcgaggtgcacagtcagggactaaagtga 147  Q
    ||||| ||||| |||||||| ||||| ||| ||||||||||||||||||||| |||||||||||| ||||||| |  |||||||||||||||    
T  41754097 taacgaaagtgtagagtcagggacttgtttatatttaatcctgagtcagggacctatgtgacagcaaggtgcagaaccagggactaaagtga 41754006  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #12
Raw Score: 51; E-Value: 3e-20
Query Start/End: Original strand, 33 - 99
Target Start/End: Complemental strand, 45476284 - 45476218
Alignment:
Q  33 tttaacgacagagactaaagtgataacggaagtgcagagtcagagacttatttgtatttaatcctga 99  Q
    |||||||  |||||||||||||||||| |||||||||||||||||||||||||||||||||| ||||    
T  45476284 tttaacgggagagactaaagtgataacagaagtgcagagtcagagacttatttgtatttaattctga 45476218  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #13
Raw Score: 47; E-Value: 8e-18
Query Start/End: Original strand, 200 - 294
Target Start/End: Original strand, 617525 - 617617
Alignment:
Q  200 acttttagaaagttgaattcaacatttttcaccatttttcaagaaattatttctatttatgttcctcttaaccaatgcacaaaggacactcttta 294  Q
    ||||||||||||||||||| ||||||| ||||||||||| || ||||||||| |||||||||| |||||||| ||||  | ||||||||||||||    
T  617525 acttttagaaagttgaatt-aacatttctcaccattttttaacaaattatttttatttatgtt-ctcttaacgaatgttccaaggacactcttta 617617  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #14
Raw Score: 47; E-Value: 8e-18
Query Start/End: Original strand, 200 - 294
Target Start/End: Original strand, 623918 - 624010
Alignment:
Q  200 acttttagaaagttgaattcaacatttttcaccatttttcaagaaattatttctatttatgttcctcttaaccaatgcacaaaggacactcttta 294  Q
    ||||||||||||||||||| ||||||| ||||||||||| || ||||||||| |||||||||| |||||||| ||||  | ||||||||||||||    
T  623918 acttttagaaagttgaatt-aacatttctcaccattttttaacaaattatttttatttatgtt-ctcttaacgaatgttccaaggacactcttta 624010  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #15
Raw Score: 47; E-Value: 8e-18
Query Start/End: Original strand, 33 - 147
Target Start/End: Original strand, 5738024 - 5738138
Alignment:
Q  33 tttaacgacagagactaaagtgataacggaagtgcagagtcagagacttatttgtatttaatcctgagtcagggatctatgtgacagcgaggtgcacagt 132  Q
    ||||||| || ||||| |||||||||||||||| ||||||||   |||| ||||||||||||| ||||||| ||| |||||| ||| |||  |||| |||    
T  5738024 tttaacgccaaagactgaagtgataacggaagtacagagtcaataacttctttgtatttaatcttgagtcatggacctatgtcacaacgatatgcaaagt 5738123  T
Q  133 cagggactaaagtga 147  Q
    |||| ||||||||||    
T  5738124 caggaactaaagtga 5738138  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #16
Raw Score: 47; E-Value: 8e-18
Query Start/End: Original strand, 33 - 147
Target Start/End: Original strand, 10407585 - 10407699
Alignment:
Q  33 tttaacgacagagactaaagtgataacggaagtgcagagtcagagacttatttgtatttaatcctgagtcagggatctatgtgacagcgaggtgcacagt 132  Q
    ||||||| |||  ||||||||||||||||||||||| ||| |  ||||||||||| ||||||||| |||||  || ||||||||||| ||| |||| | |    
T  10407585 tttaacgtcaggaactaaagtgataacggaagtgcaaagttatggacttatttgtgtttaatcctaagtcaatgacctatgtgacagtgagctgcagaat 10407684  T
Q  133 cagggactaaagtga 147  Q
    ||| |||||||||||    
T  10407685 cagagactaaagtga 10407699  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #17
Raw Score: 47; E-Value: 8e-18
Query Start/End: Original strand, 192 - 294
Target Start/End: Original strand, 42542994 - 42543095
Alignment:
Q  192 actttttaacttttagaaagttgaattcaacatttttcaccatttttcaagaaattatttctatttatgttcctcttaaccaatgcacaaaggacactct 291  Q
    ||||||| ||||||||| |||||||||||||| ||||||| |||||| || ||||| ||| ||||||||||| | ||||||||||| | |||| ||||||    
T  42542994 acttttttacttttagagagttgaattcaacacttttcactatttttaaacaaattgtttttatttatgttcat-ttaaccaatgccccaagggcactct 42543092  T
Q  292 tta 294  Q
    |||    
T  42543093 tta 42543095  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #18
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 41 - 107
Target Start/End: Original strand, 28619554 - 28619620
Alignment:
Q  41 cagagactaaagtgataacggaagtgcagagtcagagacttatttgtatttaatcctgagtcaggga 107  Q
    ||||||||||||||||||  ||||||||||||||  ||| | |||||||||||||||||||||||||    
T  28619554 cagagactaaagtgataatagaagtgcagagtcaatgacctctttgtatttaatcctgagtcaggga 28619620  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #19
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 52 - 128
Target Start/End: Complemental strand, 1952045 - 1951970
Alignment:
Q  52 gtgataacggaagtgcagagtcagagacttatttgtatttaatcctgagtcagggatctatgtgacagcgaggtgca 128  Q
    ||||||| | || |||||||||||| |||||||||||||||||||||||||| |||||||||| | ||| |||||||    
T  1952045 gtgataatgaaaatgcagagtcagaaacttatttgtatttaatcctgagtca-ggatctatgtaatagcaaggtgca 1951970  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #20
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 41 - 145
Target Start/End: Complemental strand, 31074108 - 31074004
Alignment:
Q  41 cagagactaaagtgataacggaagtgcagagtcagagacttatttgtatttaatcctgagtcagggatctatgtgacagcgaggtgcacagtcagggact 140  Q
    ||||||||||||||||||| |||||||| | ||||| |||  |||| ||||||||| ||||||| ||  | ||||||||| || |||| ||||||||| |    
T  31074108 cagagactaaagtgataacagaagtgcacattcagaaactactttgcatttaatccagagtcagagacttttgtgacagcaagatgcagagtcagggatt 31074009  T
Q  141 aaagt 145  Q
    |||||    
T  31074008 aaagt 31074004  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #21
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 33 - 85
Target Start/End: Original strand, 45476564 - 45476616
Alignment:
Q  33 tttaacgacagagactaaagtgataacggaagtgcagagtcagagacttattt 85  Q
    ||||||||||||||||||||||||||  ||||||||||||||| |||||||||    
T  45476564 tttaacgacagagactaaagtgataagagaagtgcagagtcagcgacttattt 45476616  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #22
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 207 - 294
Target Start/End: Complemental strand, 589998 - 589913
Alignment:
Q  207 gaaagttgaattcaacatttttcaccatttttcaagaaattatttctatttatgttcctcttaaccaatgcacaaaggacactcttta 294  Q
    |||||||||||| ||||||| ||||||||||| || ||||||||| |||||||||| |||||||| ||||  | ||||||||||||||    
T  589998 gaaagttgaatt-aacatttctcaccattttttaacaaattatttttatttatgtt-ctcttaacgaatgttccaaggacactcttta 589913  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #23
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 33 - 116
Target Start/End: Complemental strand, 28619111 - 28619028
Alignment:
Q  33 tttaacgacagagactaaagtgataacggaagtgcagagtcagagacttatttgtatttaatcctgagtcagggatctatgtga 116  Q
    ||||||| | |||||||||||||||||| |||||||||||||  || || ||||||||||||| || |||||||| || |||||    
T  28619111 tttaacggccgagactaaagtgataacgaaagtgcagagtcaatgatttctttgtatttaatcatgggtcagggacctttgtga 28619028  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #24
Raw Score: 39; E-Value: 0.0000000000005
Query Start/End: Original strand, 46 - 144
Target Start/End: Complemental strand, 33314970 - 33314872
Alignment:
Q  46 actaaagtgataacggaagtgcagagtcagagacttatttgtatttaatcctgagtcagggatctatgtgacagcgaggtgcacagtcagggactaaag 144  Q
    |||||||||||||| |||||  ||| ||   ||||||||||||||||||| |||||||| || || || |||||||||||||| ||| |||||| ||||    
T  33314970 actaaagtgataaccgaagtatagaatcgatgacttatttgtatttaatcttgagtcagagacctttgagacagcgaggtgcaaagtaagggaccaaag 33314872  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #25
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 45 - 118
Target Start/End: Complemental strand, 5736952 - 5736879
Alignment:
Q  45 gactaaagtgataacggaagtgcagagtcagagacttatttgtatttaatcctgagtcagggatctatgtgaca 118  Q
    |||||||||||||||| ||||| ||||| ||||| || |||||||||||| |||| |||| ||| |||||||||    
T  5736952 gactaaagtgataacgaaagtgtagagttagagatttctttgtatttaattctgaatcagagatttatgtgaca 5736879  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #26
Raw Score: 37; E-Value: 0.000000000008
Query Start/End: Original strand, 83 - 139
Target Start/End: Complemental strand, 28005415 - 28005359
Alignment:
Q  83 tttgtatttaatcctgagtcagggatctatgtgacagcgaggtgcacagtcagggac 139  Q
    ||||||||| |||||||||||||||||| ||||||| ||||||| | ||||||||||    
T  28005415 tttgtatttgatcctgagtcagggatctttgtgacaacgaggtgtagagtcagggac 28005359  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #27
Raw Score: 37; E-Value: 0.000000000008
Query Start/End: Original strand, 83 - 139
Target Start/End: Complemental strand, 28062718 - 28062662
Alignment:
Q  83 tttgtatttaatcctgagtcagggatctatgtgacagcgaggtgcacagtcagggac 139  Q
    ||||||||| |||||||||||||||||| ||||||| ||||||| | ||||||||||    
T  28062718 tttgtatttgatcctgagtcagggatctttgtgacaacgaggtgtagagtcagggac 28062662  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #28
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 184 - 230
Target Start/End: Original strand, 12221022 - 12221068
Alignment:
Q  184 aaattattactttttaacttttagaaagttgaattcaacatttttca 230  Q
    ||||||| |||||| |||||||| |||||||||||||||||||||||    
T  12221022 aaattataacttttaaacttttaaaaagttgaattcaacatttttca 12221068  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #29
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 33 - 103
Target Start/End: Complemental strand, 28524880 - 28524810
Alignment:
Q  33 tttaacgacagagactaaagtgataacggaagtgcagagtcagagacttatttgtatttaatcctgagtca 103  Q
    ||||||| ||||||||||| |||||||||||||||| | |||  || |  |||||||||||||||||||||    
T  28524880 tttaacgtcagagactaaaatgataacggaagtgcacattcaaggattactttgtatttaatcctgagtca 28524810  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #30
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 50 - 104
Target Start/End: Complemental strand, 41121214 - 41121160
Alignment:
Q  50 aagtgataacggaagtgcagagtcagagacttatttgtatttaatcctgagtcag 104  Q
    |||||||||  |||||||| |||||||||||| ||||||||||||| ||||||||    
T  41121214 aagtgataatagaagtgcatagtcagagacttctttgtatttaatcatgagtcag 41121160  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #31
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 83 - 157
Target Start/End: Complemental strand, 59624 - 59548
Alignment:
Q  83 tttgtatttaatcctgagtcagggatctatgtgacagcgaggtgcacagtcagggactaaagtga--atttactcaa 157  Q
    |||||| || |||||||||||||||   | |||||||||||||| | ||||||||||||||||||  ||||||||||    
T  59624 tttgtagtttatcctgagtcagggactaaagtgacagcgaggtgtaaagtcagggactaaagtgactatttactcaa 59548  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #32
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 194 - 294
Target Start/End: Complemental strand, 27737803 - 27737704
Alignment:
Q  194 tttttaacttttagaaagttgaattcaacatttttcaccatttttcaagaaattatttctatttatgttcctcttaaccaatgcacaaaggacactcttt 293  Q
    ||||| |||||||||||||| ||||||||| |||| |  |||||| || | |||||||||| ||||||| |||||||| ||||  | || ||||||||||    
T  27737803 tttttgacttttagaaagttaaattcaacacttttaattattttttaacatattatttctaattatgtt-ctcttaactaatgttccaaagacactcttt 27737705  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #33
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 194 - 233
Target Start/End: Original strand, 8210174 - 8210213
Alignment:
Q  194 tttttaacttttagaaagttgaattcaacatttttcacca 233  Q
    ||||||||||||| ||||||||||||| ||||||||||||    
T  8210174 tttttaacttttaaaaagttgaattcatcatttttcacca 8210213  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #34
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 45 - 92
Target Start/End: Complemental strand, 10406316 - 10406269
Alignment:
Q  45 gactaaagtgataacggaagtgcagagtcagagacttatttgtattta 92  Q
    ||||||||||||||  ||||||||||||||||||||| ||| ||||||    
T  10406316 gactaaagtgataatagaagtgcagagtcagagacttgtttttattta 10406269  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #35
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 44 - 123
Target Start/End: Complemental strand, 24199045 - 24198966
Alignment:
Q  44 agactaaagtgataacggaagtgcagagtcagagacttatttgtatttaatcctgagtcagggatctatgtgacagcgag 123  Q
    ||||||||||||||||||||||||| | |||  || |  ||||||||||||||||| |||  || || ||||||||||||    
T  24199045 agactaaagtgataacggaagtgcacattcaatgattactttgtatttaatcctgaatcaaagacctttgtgacagcgag 24198966  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #36
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 195 - 241
Target Start/End: Original strand, 4308834 - 4308880
Alignment:
Q  195 ttttaacttttagaaagttgaattcaacatttttcaccatttttcaa 241  Q
    |||||||||||| |||||| |||||| ||||||| ||||||||||||    
T  4308834 ttttaacttttataaagttaaattcatcattttttaccatttttcaa 4308880  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #37
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 45 - 107
Target Start/End: Original strand, 12637771 - 12637833
Alignment:
Q  45 gactaaagtgataacggaagtgcagagtcagagacttatttgtatttaatcctgagtcaggga 107  Q
    |||||||||||||||||||||||| | ||||  |||  |||||||| |||||||||| |||||    
T  12637771 gactaaagtgataacggaagtgcacattcaggaactactttgtattcaatcctgagttaggga 12637833  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #38
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 33 - 126
Target Start/End: Complemental strand, 8569530 - 8569437
Alignment:
Q  33 tttaacgacagagactaaagtgataacggaagtgcagagtcagagacttatttgtatttaatcctgagtcagggatctatgtgacagcgaggtg 126  Q
    ||||||| ||| ||||||| |||||||| ||||||| | ||| | |||  ||||||||||||| |||||||  || || ||||| |||||||||    
T  8569530 tttaacgtcagggactaaactgataacgaaagtgcacattcataaactactttgtatttaatcatgagtcaaagacctttgtgagagcgaggtg 8569437  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1 (Bit Score: 83; Significance: 3e-39; HSPs: 37)
Name: chr1
Description:

Target: chr1; HSP #1
Raw Score: 83; E-Value: 3e-39
Query Start/End: Original strand, 33 - 139
Target Start/End: Original strand, 7945555 - 7945661
Alignment:
Q  33 tttaacgacagagactaaagtgataacggaagtgcagagtcagagacttatttgtatttaatcctgagtcagggatctatgtgacagcgaggtgcacagt 132  Q
    ||||||| ||| |||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||| | |||||||||||||||||||| |||    
T  7945555 tttaacgtcagggactaaagtgataacggaagtgcatagtcagagacttatttgtatttaatcctgagtcaggaacctatgtgacagcgaggtgcagagt 7945654  T
Q  133 cagggac 139  Q
    |||||||    
T  7945655 cagggac 7945661  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #2
Raw Score: 77; E-Value: 1e-35
Query Start/End: Original strand, 35 - 147
Target Start/End: Original strand, 32665773 - 32665885
Alignment:
Q  35 taacgacagagactaaagtgataacggaagtgcagagtcagagacttatttgtatttaatcctgagtcagggatctatgtgacagcgaggtgcacagtca 134  Q
    ||||| ||| |||||||||||||||||||||||||||||| |||||||||||||||||||| |||||||| || ||||||||||||||| |||| | |||    
T  32665773 taacgccagggactaaagtgataacggaagtgcagagtcaaagacttatttgtatttaatcatgagtcagagacctatgtgacagcgagctgcagaatca 32665872  T
Q  135 gggactaaagtga 147  Q
    |||||||||||||    
T  32665873 gggactaaagtga 32665885  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #3
Raw Score: 75; E-Value: 2e-34
Query Start/End: Original strand, 33 - 143
Target Start/End: Complemental strand, 5782536 - 5782426
Alignment:
Q  33 tttaacgacagagactaaagtgataacggaagtgcagagtcagagacttatttgtatttaatcctgagtcagggatctatgtgacagcgaggtgcacagt 132  Q
    ||||||| |||||||||||||||||| ||||||||| | |||||||||| ||||||||||||| |||||||| || |||||||||||||||||||| |||    
T  5782536 tttaacgtcagagactaaagtgataagggaagtgcataatcagagacttctttgtatttaatcatgagtcagagacctatgtgacagcgaggtgcagagt 5782437  T
Q  133 cagggactaaa 143  Q
    |||||||||||    
T  5782436 cagggactaaa 5782426  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #4
Raw Score: 68; E-Value: 2e-30
Query Start/End: Original strand, 33 - 144
Target Start/End: Complemental strand, 9339768 - 9339657
Alignment:
Q  33 tttaacgacagagactaaagtgataacggaagtgcagagtcagagacttatttgtatttaatcctgagtcagggatctatgtgacagcgaggtgcacagt 132  Q
    ||||||| ||| ||||||||||||||||||||||||||||| | || |||||||||||||||||||||||||||| |||||| ||| |||| |||| | |    
T  9339768 tttaacgtcagggactaaagtgataacggaagtgcagagtcggggatttatttgtatttaatcctgagtcagggacctatgtaacaacgagctgcagaat 9339669  T
Q  133 cagggactaaag 144  Q
    ||||||||||||    
T  9339668 cagggactaaag 9339657  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #5
Raw Score: 68; E-Value: 2e-30
Query Start/End: Original strand, 33 - 116
Target Start/End: Original strand, 9341026 - 9341109
Alignment:
Q  33 tttaacgacagagactaaagtgataacggaagtgcagagtcagagacttatttgtatttaatcctgagtcagggatctatgtga 116  Q
    ||||||| ||||||||||||||||||| |||||||| |||||||||||||||||||||||||||||||||||||| ||||||||    
T  9341026 tttaacgtcagagactaaagtgataacagaagtgcaaagtcagagacttatttgtatttaatcctgagtcagggacctatgtga 9341109  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #6
Raw Score: 68; E-Value: 2e-30
Query Start/End: Original strand, 33 - 128
Target Start/End: Original strand, 10333187 - 10333282
Alignment:
Q  33 tttaacgacagagactaaagtgataacggaagtgcagagtcagagacttatttgtatttaatcctgagtcagggatctatgtgacagcgaggtgca 128  Q
    |||||||  |||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||| || |||||| |||||||| ||||    
T  10333187 tttaacgctagagactaaagtgataacggaagtgcagagtcagagacttatttgtatttaatcttgagtcagagacctatgtaacagcgagctgca 10333282  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #7
Raw Score: 68; E-Value: 2e-30
Query Start/End: Original strand, 44 - 135
Target Start/End: Original strand, 52440571 - 52440662
Alignment:
Q  44 agactaaagtgataacggaagtgcagagtcagagacttatttgtatttaatcctgagtcagggatctatgtgacagcgaggtgcacagtcag 135  Q
    ||||||||||||||| |||||||||||||||||||||||||| ||||||||||||| ||||||| |||||||||||||| ||||| ||||||    
T  52440571 agactaaagtgataatggaagtgcagagtcagagacttatttatatttaatcctgactcagggacctatgtgacagcgatgtgcaaagtcag 52440662  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #8
Raw Score: 67; E-Value: 1e-29
Query Start/End: Original strand, 45 - 147
Target Start/End: Complemental strand, 10333096 - 10332994
Alignment:
Q  45 gactaaagtgataacggaagtgcagagtcagagacttatttgtatttaatcctgagtcagggatctatgtgacagcgaggtgcacagtcagggactaaag 144  Q
    ||||||| |||||||||||||||||||| || ||||||||| ||||||||||||| ||| ||| |||||||||| ||||||||| |||||||||||||||    
T  10333096 gactaaaatgataacggaagtgcagagtaagggacttatttatatttaatcctgaatcaaggacctatgtgacaacgaggtgcaaagtcagggactaaag 10332997  T
Q  145 tga 147  Q
    |||    
T  10332996 tga 10332994  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #9
Raw Score: 67; E-Value: 1e-29
Query Start/End: Original strand, 33 - 147
Target Start/End: Complemental strand, 22856802 - 22856688
Alignment:
Q  33 tttaacgacagagactaaagtgataacggaagtgcagagtcagagacttatttgtatttaatcctgagtcagggatctatgtgacagcgaggtgcacagt 132  Q
    ||||||| | |||||||||||||||||||||||||||||| |||||||| ||||||||||||||||||||| | |||| ||| ||| || |||||| |||    
T  22856802 tttaacgtcggagactaaagtgataacggaagtgcagagttagagacttctttgtatttaatcctgagtcaagaatctttgtaacaacgtggtgcagagt 22856703  T
Q  133 cagggactaaagtga 147  Q
    ||| |||||||||||    
T  22856702 cagtgactaaagtga 22856688  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #10
Raw Score: 63; E-Value: 2e-27
Query Start/End: Original strand, 33 - 147
Target Start/End: Complemental strand, 6612541 - 6612427
Alignment:
Q  33 tttaacgacagagactaaagtgataacggaagtgcagagtcagagacttatttgtatttaatcctgagtcagggatctatgtgacagcgaggtgcacagt 132  Q
    ||||||| ||| || ||||||||||| |||||||||||||||||||||| ||||||||||||| |||||||| ||  | | | ||||||||||||| |||    
T  6612541 tttaacgtcagggattaaagtgataatggaagtgcagagtcagagacttgtttgtatttaatcatgagtcagagacatttataacagcgaggtgcagagt 6612442  T
Q  133 cagggactaaagtga 147  Q
    |||||||||||||||    
T  6612441 cagggactaaagtga 6612427  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #11
Raw Score: 61; E-Value: 4e-26
Query Start/End: Original strand, 192 - 276
Target Start/End: Complemental strand, 51046728 - 51046645
Alignment:
Q  192 actttttaacttttagaaagttgaattcaacatttttcaccatttttcaagaaattatttctatttatgttcctcttaaccaatg 276  Q
    ||||||| ||||||| |||||||||||||||| ||||||||||||||||| |||||||||||||||||||| |||||||||||||    
T  51046728 actttttgacttttaaaaagttgaattcaacacttttcaccatttttcaacaaattatttctatttatgtt-ctcttaaccaatg 51046645  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #12
Raw Score: 60; E-Value: 1e-25
Query Start/End: Original strand, 45 - 128
Target Start/End: Original strand, 5783122 - 5783205
Alignment:
Q  45 gactaaagtgataacggaagtgcagagtcagagacttatttgtatttaatcctgagtcagggatctatgtgacagcgaggtgca 128  Q
    ||||||||||||||||||||||||||||||  ||||| |||||||||||| |||||||  ||||||||||||||||||||||||    
T  5783122 gactaaagtgataacggaagtgcagagtcatggacttctttgtatttaattctgagtcgaggatctatgtgacagcgaggtgca 5783205  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #13
Raw Score: 57; E-Value: 9e-24
Query Start/End: Original strand, 45 - 141
Target Start/End: Complemental strand, 7944265 - 7944169
Alignment:
Q  45 gactaaagtgataacggaagtgcagagtcagagacttatttgtatttaatcctgagtcagggatctatgtgacagcgaggtgcacagtcagggacta 141  Q
    ||||||| |||||||| |||||||||||||  ||||||||||||||||||  ||||||||||| ||||||||||||||| |||| | ||||||||||    
T  7944265 gactaaattgataacgaaagtgcagagtcaaggacttatttgtatttaattttgagtcagggacctatgtgacagcgagttgcaaaatcagggacta 7944169  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #14
Raw Score: 54; E-Value: 5e-22
Query Start/End: Original strand, 194 - 263
Target Start/End: Original strand, 32268033 - 32268102
Alignment:
Q  194 tttttaacttttagaaagttgaattcaacatttttcaccatttttcaagaaattatttctatttatgttc 263  Q
    ||||| |||||||||||||||||||||||| ||||||||||||||||| ||||||||| |||||||||||    
T  32268033 tttttgacttttagaaagttgaattcaacacttttcaccatttttcaacaaattatttttatttatgttc 32268102  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #15
Raw Score: 54; E-Value: 5e-22
Query Start/End: Original strand, 33 - 147
Target Start/End: Complemental strand, 52439597 - 52439487
Alignment:
Q  33 tttaacgacagagactaaagtgataacggaagtgcagagtcagagacttatttgtatttaatcctgagtcagggatctatgtgacagcgaggtgcacagt 132  Q
    ||||||| ||| ||||||||||||||||||| |||||||    |||||||| |||||||||||||||| ||| || ||||||||||||||| |||| | |    
T  52439597 tttaacgtcagggactaaagtgataacggaaatgcagag----agacttatctgtatttaatcctgagccagagacctatgtgacagcgagctgcagaat 52439502  T
Q  133 cagggactaaagtga 147  Q
    ||||| |||||||||    
T  52439501 caggggctaaagtga 52439487  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #16
Raw Score: 52; E-Value: 9e-21
Query Start/End: Original strand, 45 - 104
Target Start/End: Original strand, 6613992 - 6614051
Alignment:
Q  45 gactaaagtgataacggaagtgcagagtcagagacttatttgtatttaatcctgagtcag 104  Q
    ||||||| ||||||| ||||||||||||||||||||||||||||||||||||||||||||    
T  6613992 gactaaaatgataactgaagtgcagagtcagagacttatttgtatttaatcctgagtcag 6614051  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #17
Raw Score: 49; E-Value: 5e-19
Query Start/End: Original strand, 182 - 274
Target Start/End: Original strand, 13925101 - 13925191
Alignment:
Q  182 ggaaattattactttttaacttttagaaagttgaattcaacatttttcaccatttttcaagaaattatttctatttatgttcctcttaaccaa 274  Q
    ||||||||  ||||||| ||||||||| ||||||||| |||| ||||||| ||||||||| |||||||||||||||||||| |||||||||||    
T  13925101 ggaaattacaactttttgacttttagatagttgaatt-aacacttttcactatttttcaacaaattatttctatttatgtt-ctcttaaccaa 13925191  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #18
Raw Score: 46; E-Value: 3e-17
Query Start/End: Original strand, 44 - 145
Target Start/End: Complemental strand, 1001265 - 1001164
Alignment:
Q  44 agactaaagtgataacggaagtgcagagtcagagacttatttgtatttaatcctgagtcagggatctatgtgacagcgaggtgcacagtcagggactaaa 143  Q
    |||||||| ||||||| |||||||| | |||||||||  |||||||||||||| |||||| ||| || |||| || ||||||||| ||||| ||||||||    
T  1001265 agactaaactgataacagaagtgcacattcagagactactttgtatttaatcccgagtcatggacctttgtggcaacgaggtgcaaagtcatggactaaa 1001166  T
Q  144 gt 145  Q
    ||    
T  1001165 gt 1001164  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #19
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 47 - 143
Target Start/End: Complemental strand, 3117757 - 3117661
Alignment:
Q  47 ctaaagtgataacggaagtgcagagtcagagacttatttgtatttaatcctgagtcagggatctatgtgacagcgaggtgcacagtcagggactaaa 143  Q
    |||||||||||||||||||| ||||||||||| || ||||||||||||| |||||||| || || ||||| | ||| ||| | ||| ||||||||||    
T  3117757 ctaaagtgataacggaagtggagagtcagagatttctttgtatttaatcttgagtcagagacctttgtgataacgatgtgaagagttagggactaaa 3117661  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #20
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 53 - 145
Target Start/End: Complemental strand, 44020088 - 44019996
Alignment:
Q  53 tgataacggaagtgcagagtcagagacttatttgtatttaatcctgagtcagggatctatgtgacagcgaggtgcacagtcagggactaaagt 145  Q
    |||||||| |||||||||||||||||||| ||| ||||||||| |||||||| ||  | ||||||| |||| |||| |||||||||| |||||    
T  44020088 tgataacgtaagtgcagagtcagagacttctttatatttaatcttgagtcagagacttttgtgacaacgagttgcaaagtcagggaccaaagt 44019996  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #21
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 33 - 147
Target Start/End: Complemental strand, 8975281 - 8975167
Alignment:
Q  33 tttaacgacagagactaaagtgataacggaagtgcagagtcagagacttatttgtatttaatcctgagtcagggatctatgtgacagcgaggtgcacagt 132  Q
    ||||||| || ||||||||||||||||| ||||||| | |||  ||||  ||| ||||||||| ||||||||||| || ||||||| | ||||||| |||    
T  8975281 tttaacgccaaagactaaagtgataacgaaagtgcatattcatggactactttatatttaatcttgagtcagggacctttgtgacaacaaggtgcaaagt 8975182  T
Q  133 cagggactaaagtga 147  Q
     |||||| |||||||    
T  8975181 tagggaccaaagtga 8975167  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #22
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 33 - 147
Target Start/End: Complemental strand, 44719472 - 44719358
Alignment:
Q  33 tttaacgacagagactaaagtgataacggaagtgcagagtcagagacttatttgtatttaatcctgagtcagggatctatgtgacagcgaggtgcacagt 132  Q
    ||||| ||||||||||||| |||||||||||||||| | ||| | |||  ||| ||||||||||||||| || ||||| ||||||| |||| |||| |||    
T  44719472 tttaaagacagagactaaaatgataacggaagtgcatattcataaactactttatatttaatcctgagttagagatctttgtgacaacgagatgcaaagt 44719373  T
Q  133 cagggactaaagtga 147  Q
    || |||  |||||||    
T  44719372 caaggatcaaagtga 44719358  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #23
Raw Score: 42; E-Value: 0.000000000000008
Query Start/End: Original strand, 200 - 277
Target Start/End: Complemental strand, 1107462 - 1107386
Alignment:
Q  200 acttttagaaagttgaattcaacatttttcaccatttttcaagaaattatttctatttatgttcctcttaaccaatgc 277  Q
    |||||||| ||||||||||||||| |||||||| ||| | || ||||||||| |||||||||| ||||||||||||||    
T  1107462 acttttaggaagttgaattcaacacttttcaccgtttattaacaaattatttttatttatgtt-ctcttaaccaatgc 1107386  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #24
Raw Score: 42; E-Value: 0.000000000000008
Query Start/End: Original strand, 46 - 107
Target Start/End: Complemental strand, 25037987 - 25037926
Alignment:
Q  46 actaaagtgataacggaagtgcagagtcagagacttatttgtatttaatcctgagtcaggga 107  Q
    ||||||||||||||| |||| ||||||||| ||||| ||||||||||||| |||||||||||    
T  25037987 actaaagtgataacgtaagtccagagtcagtgacttctttgtatttaatcatgagtcaggga 25037926  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #25
Raw Score: 42; E-Value: 0.000000000000008
Query Start/End: Original strand, 46 - 107
Target Start/End: Complemental strand, 25043199 - 25043138
Alignment:
Q  46 actaaagtgataacggaagtgcagagtcagagacttatttgtatttaatcctgagtcaggga 107  Q
    ||||||||||||||| |||| ||||||||| ||||| ||||||||||||| |||||||||||    
T  25043199 actaaagtgataacgtaagtccagagtcagtgacttctttgtatttaatcatgagtcaggga 25043138  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #26
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 48 - 128
Target Start/End: Original strand, 534574 - 534653
Alignment:
Q  48 taaagtgataacggaagtgcagagtcagagacttatttgtatttaatcctgagtcagggatctatgtgacagcgaggtgca 128  Q
    |||||||||||| |||||| |||||||| ||||| ||||||||||||||||| ||| | | |||||| |||||||||||||    
T  534574 taaagtgataacagaagtgtagagtcag-gacttgtttgtatttaatcctgaatcaagaacctatgtaacagcgaggtgca 534653  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #27
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 200 - 294
Target Start/End: Original strand, 39421026 - 39421126
Alignment:
Q  200 acttttagaaagttgaattcaacatttttca-------ccatttttcaagaaattatttctatttatgttcctcttaaccaatgcacaaaggacactctt 292  Q
    |||||||||||||||||||||||| ||||||       || |||||||| |||||||||||||||||||| |||||||||||||  | ||||||||| ||    
T  39421026 acttttagaaagttgaattcaacacttttcagtttccaccgtttttcaacaaattatttctatttatgtt-ctcttaaccaatgtcccaaggacactgtt 39421124  T
Q  293 ta 294  Q
    ||    
T  39421125 ta 39421126  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #28
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 45 - 104
Target Start/End: Original strand, 50107216 - 50107275
Alignment:
Q  45 gactaaagtgataacggaagtgcagagtcagagacttatttgtatttaatcctgagtcag 104  Q
    |||||||||||||||||||||||| | |||||||||  ||||||||||||||||| ||||    
T  50107216 gactaaagtgataacggaagtgcacattcagagactattttgtatttaatcctgaatcag 50107275  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #29
Raw Score: 39; E-Value: 0.0000000000005
Query Start/End: Original strand, 45 - 147
Target Start/End: Original strand, 11060797 - 11060899
Alignment:
Q  45 gactaaagtgataacggaagtgcagagtcagagacttatttgtatttaatcctgagtcagggatctatgtgacagcgaggtgcacagtcagggactaaag 144  Q
    |||||||||||||||| ||||||  | |||| ||||  ||||||||||||  ||||||| ||| || ||||||||||||||||| ||||| |||  ||||    
T  11060797 gactaaagtgataacgaaagtgcccattcagggactattttgtatttaattttgagtcatggacctttgtgacagcgaggtgcatagtcaaggatcaaag 11060896  T
Q  145 tga 147  Q
    |||    
T  11060897 tga 11060899  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #30
Raw Score: 37; E-Value: 0.000000000008
Query Start/End: Original strand, 182 - 230
Target Start/End: Complemental strand, 12173221 - 12173173
Alignment:
Q  182 ggaaattattactttttaacttttagaaagttgaattcaacatttttca 230  Q
    ||||||||| ||||||| ||||||| |||||||||||||||||||||||    
T  12173221 ggaaattataactttttgacttttacaaagttgaattcaacatttttca 12173173  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #31
Raw Score: 37; E-Value: 0.000000000008
Query Start/End: Original strand, 33 - 145
Target Start/End: Complemental strand, 51450122 - 51450011
Alignment:
Q  33 tttaacgacagagactaaagtgataacggaagtgcagagtcagagacttatttgtatttaatcctgagtcagggatctatgtgacagcgaggtgcacagt 132  Q
    ||||||| |||| |||||| ||||| || ||||||||||||||| |||| |||| |||||||  ||||| ||| | || |||||| |||||||||| |||    
T  51450122 tttaacgtcagatactaaaatgata-cgaaagtgcagagtcagaaacttctttgcatttaattatgagttaggaacctttgtgacggcgaggtgcagagt 51450024  T
Q  133 cagggactaaagt 145  Q
    ||| | |||||||    
T  51450023 cagcggctaaagt 51450011  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #32
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 48 - 95
Target Start/End: Original strand, 34088485 - 34088532
Alignment:
Q  48 taaagtgataacggaagtgcagagtcagagacttatttgtatttaatc 95  Q
    ||||||||||  |||||||||||||||||||||| |||||||||||||    
T  34088485 taaagtgatagtggaagtgcagagtcagagacttctttgtatttaatc 34088532  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #33
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 156 - 230
Target Start/End: Complemental strand, 46289705 - 46289632
Alignment:
Q  156 aaactaaaagtaataattttgcacccggaaattattactttttaacttttagaaagttgaattcaacatttttca 230  Q
    |||||||||||| || |||||||   ||||||||  ||||||||||||||| ||||| |||||||||||||||||    
T  46289705 aaactaaaagtagtagttttgcatt-ggaaattacaactttttaacttttaaaaagtcgaattcaacatttttca 46289632  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #34
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 202 - 262
Target Start/End: Original strand, 3894800 - 3894861
Alignment:
Q  202 ttttagaaagttgaattcaacatttttcaccatttttc-aagaaattatttctatttatgtt 262  Q
    ||||| |||| | ||||||||||||||||| ||||||| || ||||||||||||||||||||    
T  3894800 ttttaaaaagctaaattcaacatttttcactatttttctaacaaattatttctatttatgtt 3894861  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #35
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 227 - 294
Target Start/End: Complemental strand, 46289645 - 46289579
Alignment:
Q  227 ttcaccatttttcaagaaattatttctatttatgttcctcttaaccaatgcacaaaggacactcttta 294  Q
    |||| |||||||||| ||||||||||||||||| || || ||||||||||| | || |||||||||||    
T  46289645 ttcaacatttttcaacaaattatttctatttatatt-cttttaaccaatgccctaaagacactcttta 46289579  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #36
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 194 - 240
Target Start/End: Original strand, 27210749 - 27210795
Alignment:
Q  194 tttttaacttttagaaagttgaattcaacatttttcaccatttttca 240  Q
    ||||||||||||| |||||| |||| | |||||||||||||||||||    
T  27210749 tttttaacttttaaaaagttaaattgatcatttttcaccatttttca 27210795  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #37
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 195 - 257
Target Start/End: Complemental strand, 41898940 - 41898878
Alignment:
Q  195 ttttaacttttagaaagttgaattcaacatttttcaccatttttcaagaaattatttctattt 257  Q
    |||||||||||| |||||| |||||| || |||| |||||||||||| | | |||||||||||    
T  41898940 ttttaacttttaaaaagttaaattcatcactttttaccatttttcaatacaatatttctattt 41898878  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6 (Bit Score: 79; Significance: 7e-37; HSPs: 11)
Name: chr6
Description:

Target: chr6; HSP #1
Raw Score: 79; E-Value: 7e-37
Query Start/End: Original strand, 33 - 147
Target Start/End: Complemental strand, 30748121 - 30748007
Alignment:
Q  33 tttaacgacagagactaaagtgataacggaagtgcagagtcagagacttatttgtatttaatcctgagtcagggatctatgtgacagcgaggtgcacagt 132  Q
    ||||||| ||| |||||||||||||||| ||||| |||||||||||||| ||||||||||||||| ||||||||| |||||||||||||||||||| | |    
T  30748121 tttaacggcagcgactaaagtgataacgaaagtgtagagtcagagacttgtttgtatttaatcctaagtcagggacctatgtgacagcgaggtgcagaat 30748022  T
Q  133 cagggactaaagtga 147  Q
    |||||||||||||||    
T  30748021 cagggactaaagtga 30748007  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #2
Raw Score: 67; E-Value: 1e-29
Query Start/End: Original strand, 33 - 147
Target Start/End: Original strand, 31219161 - 31219275
Alignment:
Q  33 tttaacgacagagactaaagtgataacggaagtgcagagtcagagacttatttgtatttaatcctgagtcagggatctatgtgacagcgaggtgcacagt 132  Q
    ||||||| ||||||||||||||||||||||||||  |||||||  |||| ||||||||||||||||||| |  || |||||||||||||||||||| |||    
T  31219161 tttaacgtcagagactaaagtgataacggaagtgtcgagtcaggaacttctttgtatttaatcctgagttaatgacctatgtgacagcgaggtgcagagt 31219260  T
Q  133 cagggactaaagtga 147  Q
    |||||| ||||||||    
T  31219261 cagggattaaagtga 31219275  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #3
Raw Score: 64; E-Value: 6e-28
Query Start/End: Original strand, 48 - 147
Target Start/End: Complemental strand, 31219062 - 31218963
Alignment:
Q  48 taaagtgataacggaagtgcagagtcagagacttatttgtatttaatcctgagtcagggatctatgtgacagcgaggtgcacagtcagggactaaagtga 147  Q
    ||||||||||||||||||||||||||||  |||| ||||||||||||||||||| | ||| |||||||||||||||||||| |||||| || ||||||||    
T  31219062 taaagtgataacggaagtgcagagtcaggaacttctttgtatttaatcctgagttaaggacctatgtgacagcgaggtgcagagtcagagattaaagtga 31218963  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #4
Raw Score: 57; E-Value: 9e-24
Query Start/End: Original strand, 182 - 294
Target Start/End: Original strand, 1947417 - 1947528
Alignment:
Q  182 ggaaattattactttttaacttttagaaagttgaattcaacatttttcaccatttttcaagaaattatttctatttatgttcctcttaaccaatgcacaa 281  Q
    ||||||||  ||||||| ||||||||||||||||||| |||| |||| |||||||| ||| |||||||||||||||||||| ||||||||||||||   |    
T  1947417 ggaaattacaactttttgacttttagaaagttgaatttaacactttttaccattttccaacaaattatttctatttatgtt-ctcttaaccaatgcctca 1947515  T
Q  282 aggacactcttta 294  Q
    || ||||||||||    
T  1947516 agaacactcttta 1947528  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #5
Raw Score: 56; E-Value: 4e-23
Query Start/End: Original strand, 183 - 294
Target Start/End: Complemental strand, 16441885 - 16441775
Alignment:
Q  183 gaaattattactttttaacttttagaaagttgaattcaacatttttcaccatttttcaagaaattatttctatttatgttcctcttaaccaatgcacaaa 282  Q
    |||||||  ||||||| ||||||||||| |||||||||||||||||||||| ||||||| ||||||||| ||||||| || || ||||||||||  ||||    
T  16441885 gaaattacaacttttttacttttagaaatttgaattcaacatttttcaccacttttcaacaaattatttatatttatatt-cttttaaccaatgtccaaa 16441787  T
Q  283 ggacactcttta 294  Q
    | ||||||||||    
T  16441786 gaacactcttta 16441775  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #6
Raw Score: 51; E-Value: 3e-20
Query Start/End: Original strand, 33 - 147
Target Start/End: Complemental strand, 23508070 - 23507957
Alignment:
Q  33 tttaacgacagagactaaagtgataacggaagtgcagagtcagagacttatttgtatttaatcctgagtcagggatctatgtgacagcgaggtgcacagt 132  Q
    ||||||||||| |||||||||||||| ||||||| | ||||| ||| || ||||||||||||||||| ||||| | ||||||||||| |||||| | ||     
T  23508070 tttaacgacagggactaaagtgataaaggaagtgtaaagtcatagatttgtttgtatttaatcctgaatcaggaacctatgtgacagggaggtgtagag- 23507972  T
Q  133 cagggactaaagtga 147  Q
    ||| |||||||||||    
T  23507971 cagagactaaagtga 23507957  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #7
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 200 - 263
Target Start/End: Original strand, 19646027 - 19646090
Alignment:
Q  200 acttttagaaagttgaattcaacatttttcaccatttttcaagaaattatttctatttatgttc 263  Q
    ||||||| |||||||||||||||| ||||||||||||||||| ||||| |||||||||||||||    
T  19646027 acttttaaaaagttgaattcaacacttttcaccatttttcaacaaattttttctatttatgttc 19646090  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #8
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 41 - 135
Target Start/End: Original strand, 12676479 - 12676573
Alignment:
Q  41 cagagactaaagtgataacggaagtgcagagtcagagacttatttgtatttaatcctgagtcagggatctatgtgacagcgaggtgcacagtcag 135  Q
    ||||||||||| |||||||  ||||||| | | |||||||  |||||||||||||||||| ||| || |  ||||||| ||||||||| ||||||    
T  12676479 cagagactaaactgataacaaaagtgcacatttagagactactttgtatttaatcctgagacagagaccattgtgacaacgaggtgcagagtcag 12676573  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #9
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 62 - 122
Target Start/End: Original strand, 6468811 - 6468871
Alignment:
Q  62 aagtgcagagtcagagacttatttgtatttaatcctgagtcagggatctatgtgacagcga 122  Q
    ||||||| | |||||||||  ||||||||||||| ||||||||||| || |||||||||||    
T  6468811 aagtgcacattcagagactattttgtatttaatcatgagtcagggacctttgtgacagcga 6468871  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #10
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 200 - 263
Target Start/End: Original strand, 5138503 - 5138565
Alignment:
Q  200 acttttagaaagttgaattcaacatttttcaccatttttcaagaaattatttctatttatgttc 263  Q
    ||||||||||| |||||||||||||||||||  |||||| || ||| ||||| |||||||||||    
T  5138503 acttttagaaatttgaattcaacatttttca-tattttttaataaaatatttgtatttatgttc 5138565  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #11
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 200 - 294
Target Start/End: Complemental strand, 27127586 - 27127493
Alignment:
Q  200 acttttagaaagttgaattcaacatttttcaccatttttcaagaaattatttctatttatgttcctcttaaccaatgcacaaaggacactcttta 294  Q
    ||||||| |||||| |||||| ||||||||||||||| |||| | | ||||||||||| |  || |||||| |||||||  | ||||||||||||    
T  27127586 acttttaaaaagttaaattcatcatttttcaccatttctcaatacaatatttctattt-ttatcatcttaaacaatgcatcatggacactcttta 27127493  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5 (Bit Score: 79; Significance: 7e-37; HSPs: 32)
Name: chr5
Description:

Target: chr5; HSP #1
Raw Score: 79; E-Value: 7e-37
Query Start/End: Original strand, 33 - 147
Target Start/End: Complemental strand, 8074573 - 8074459
Alignment:
Q  33 tttaacgacagagactaaagtgataacggaagtgcagagtcagagacttatttgtatttaatcctgagtcagggatctatgtgacagcgaggtgcacagt 132  Q
    ||||||| |||  |||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||  |||||||||||||| |||| | |    
T  8074573 tttaacgtcaggaactaaagtgataacggaagtgcagagtcagggacttatttgtatttaatcctgagtcagggacttatgtgacagcgagctgcataat 8074474  T
Q  133 cagggactaaagtga 147  Q
    |||||||||||||||    
T  8074473 cagggactaaagtga 8074459  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #2
Raw Score: 75; E-Value: 2e-34
Query Start/End: Original strand, 33 - 147
Target Start/End: Complemental strand, 4592983 - 4592869
Alignment:
Q  33 tttaacgacagagactaaagtgataacggaagtgcagagtcagagacttatttgtatttaatcctgagtcagggatctatgtgacagcgaggtgcacagt 132  Q
    ||||||| ||| ||||||||||||||||||||||||||||||| ||||||||||||||||||| |||||||||||  |||||||||||||| | || | |    
T  4592983 tttaacgtcagggactaaagtgataacggaagtgcagagtcagggacttatttgtatttaatcttgagtcagggacttatgtgacagcgagctacataat 4592884  T
Q  133 cagggactaaagtga 147  Q
    |||||||||||||||    
T  4592883 cagggactaaagtga 4592869  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #3
Raw Score: 75; E-Value: 2e-34
Query Start/End: Original strand, 45 - 147
Target Start/End: Original strand, 28591127 - 28591229
Alignment:
Q  45 gactaaagtgataacggaagtgcagagtcagagacttatttgtatttaatcctgagtcagggatctatgtgacagcgaggtgcacagtcagggactaaag 144  Q
    |||||||||||||| |||||||||||||||| || |||||||||||||||||||||||||||| |||||||||||||||||||| |||||||||  ||||    
T  28591127 gactaaagtgataaaggaagtgcagagtcagggatttatttgtatttaatcctgagtcagggacctatgtgacagcgaggtgcagagtcagggatcaaag 28591226  T
Q  145 tga 147  Q
    |||    
T  28591227 tga 28591229  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #4
Raw Score: 71; E-Value: 4e-32
Query Start/End: Original strand, 33 - 147
Target Start/End: Original strand, 546037 - 546150
Alignment:
Q  33 tttaacgacagagactaaagtgataacggaagtgcagagtcagagacttatttgtatttaatcctgagtcagggatctatgtgacagcgaggtgcacagt 132  Q
    ||||||| ||| ||||||||||||||||||||||||||||||  ||||||| ||||||||||||||||||||||| ||||||||||||||| |||| | |    
T  546037 tttaacgtcagggactaaagtgataacggaagtgcagagtcaaggacttatctgtatttaatcctgagtcagggacctatgtgacagcgagctgcaaaat 546136  T
Q  133 cagggactaaagtga 147  Q
    | |||||||||||||    
T  546137 c-gggactaaagtga 546150  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #5
Raw Score: 71; E-Value: 4e-32
Query Start/End: Original strand, 33 - 135
Target Start/End: Complemental strand, 25590552 - 25590451
Alignment:
Q  33 tttaacgacagagactaaagtgataacggaagtgcagagtcagagacttatttgtatttaatcctgagtcagggatctatgtgacagcgaggtgcacagt 132  Q
    ||||||| |||||| |||||||||||| |||||||||| ||||||||||||||||||||||||| |||||||||| |||||||||||||||||||| |||    
T  25590552 tttaacgtcagagattaaagtgataacagaagtgcagaatcagagacttatttgtatttaatcc-gagtcagggacctatgtgacagcgaggtgcagagt 25590454  T
Q  133 cag 135  Q
    |||    
T  25590453 cag 25590451  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #6
Raw Score: 67; E-Value: 1e-29
Query Start/End: Original strand, 33 - 147
Target Start/End: Complemental strand, 2464791 - 2464677
Alignment:
Q  33 tttaacgacagagactaaagtgataacggaagtgcagagtcagagacttatttgtatttaatcctgagtcagggatctatgtgacagcgaggtgcacagt 132  Q
    ||||||| |||||||||||||||||||| ||||||||||| || ||||||||||||||||||| ||||||| ||| |||| |||||||||| |||| | |    
T  2464791 tttaacgtcagagactaaagtgataacgtaagtgcagagttagggacttatttgtatttaatcatgagtcatggacctatatgacagcgagctgcagaat 2464692  T
Q  133 cagggactaaagtga 147  Q
    ||| |||||||||||    
T  2464691 cagtgactaaagtga 2464677  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #7
Raw Score: 67; E-Value: 1e-29
Query Start/End: Original strand, 41 - 147
Target Start/End: Original strand, 9538058 - 9538164
Alignment:
Q  41 cagagactaaagtgataacggaagtgcagagtcagagacttatttgtatttaatcctgagtcagggatctatgtgacagcgaggtgcacagtcagggact 140  Q
    ||||||||||| |||||||||||||||| | |||||||||| ||||||||||||||||||||||||| |||| ||||| |||| |||| ||||||||||     
T  9538058 cagagactaaaatgataacggaagtgcacaatcagagacttctttgtatttaatcctgagtcagggacctatatgacaacgagatgcagagtcagggacc 9538157  T
Q  141 aaagtga 147  Q
    |||||||    
T  9538158 aaagtga 9538164  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #8
Raw Score: 67; E-Value: 1e-29
Query Start/End: Original strand, 33 - 147
Target Start/End: Complemental strand, 16611850 - 16611736
Alignment:
Q  33 tttaacgacagagactaaagtgataacggaagtgcagagtcagagacttatttgtatttaatcctgagtcagggatctatgtgacagcgaggtgcacagt 132  Q
    ||||||| |||||||||||||||||||||||||||| | |||||| ||| |||||||||||||||||||||| || |||||||||||||||||| | |||    
T  16611850 tttaacgtcagagactaaagtgataacggaagtgcataatcagaggcttctttgtatttaatcctgagtcagagacctatgtgacagcgaggtgtagagt 16611751  T
Q  133 cagggactaaagtga 147  Q
    || | | ||||||||    
T  16611750 caagaattaaagtga 16611736  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #9
Raw Score: 66; E-Value: 4e-29
Query Start/End: Original strand, 45 - 134
Target Start/End: Complemental strand, 19183060 - 19182971
Alignment:
Q  45 gactaaagtgataacggaagtgcagagtcagagacttatttgtatttaatcctgagtcagggatctatgtgacagcgaggtgcacagtca 134  Q
    |||||||||||||||||||||| ||||||||  ||||||||||||||||||||||||||| || |||||||||||||||||||| |||||    
T  19183060 gactaaagtgataacggaagtgtagagtcaggaacttatttgtatttaatcctgagtcagagacctatgtgacagcgaggtgcaaagtca 19182971  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #10
Raw Score: 63; E-Value: 2e-27
Query Start/End: Original strand, 33 - 147
Target Start/End: Original strand, 2466775 - 2466889
Alignment:
Q  33 tttaacgacagagactaaagtgataacggaagtgcagagtcagagacttatttgtatttaatcctgagtcagggatctatgtgacagcgaggtgcacagt 132  Q
    ||||||| ||| |||||||||||||||||||||||||||| || ||||||||| ||||||||||||| |||  || |||||||| ||||||||||| |||    
T  2466775 tttaacgtcagggactaaagtgataacggaagtgcagagttagggacttatttttatttaatcctgaatcaatgacctatgtgatagcgaggtgcagagt 2466874  T
Q  133 cagggactaaagtga 147  Q
    ||| ||| |||||||    
T  2466875 cagagaccaaagtga 2466889  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #11
Raw Score: 62; E-Value: 9e-27
Query Start/End: Original strand, 33 - 147
Target Start/End: Original strand, 14891148 - 14891258
Alignment:
Q  33 tttaacgacagagactaaagtgataacggaagtgcagagtcagagacttatttgtatttaatcctgagtcagggatctatgtgacagcgaggtgcacagt 132  Q
    ||||||| |||||||||||||||||||||||||| ||||||||||||    ||| |||||||| |||||||| || |||||||||||||||||||| |||    
T  14891148 tttaacgtcagagactaaagtgataacggaagtgtagagtcagagac----ttgcatttaatcatgagtcagagacctatgtgacagcgaggtgcagagt 14891243  T
Q  133 cagggactaaagtga 147  Q
     |||||| |||||||    
T  14891244 gagggaccaaagtga 14891258  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #12
Raw Score: 60; E-Value: 1e-25
Query Start/End: Original strand, 48 - 147
Target Start/End: Complemental strand, 21069396 - 21069297
Alignment:
Q  48 taaagtgataacggaagtgcagagtcagagacttatttgtatttaatcctgagtcagggatctatgtgacagcgaggtgcacagtcagggactaaagtga 147  Q
    |||||||| ||| ||||||||||||||  |||||||||||||||||||||||||||| || || ||||||| ||||||||| |||||| |||||||||||    
T  21069396 taaagtgaaaacagaagtgcagagtcaaggacttatttgtatttaatcctgagtcagagacctctgtgacaacgaggtgcagagtcagagactaaagtga 21069297  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #13
Raw Score: 59; E-Value: 6e-25
Query Start/End: Original strand, 61 - 147
Target Start/End: Complemental strand, 18400284 - 18400198
Alignment:
Q  61 gaagtgcagagtcagagacttatttgtatttaatcctgagtcagggatctatgtgacagcgaggtgcacagtcagggactaaagtga 147  Q
    ||||||||||||||| ||||| ||| ||||||||||||||||| ||| ||||||||||| |||||||| ||||||||||||||||||    
T  18400284 gaagtgcagagtcagtgacttctttttatttaatcctgagtcaaggacctatgtgacagtgaggtgcagagtcagggactaaagtga 18400198  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #14
Raw Score: 57; E-Value: 9e-24
Query Start/End: Original strand, 33 - 145
Target Start/End: Complemental strand, 9537144 - 9537033
Alignment:
Q  33 tttaacgacagagactaaagtgataacggaagtgcagagtcagagacttatttgtatttaatcctgagtcagggatctatgtgacagcgaggtgcacagt 132  Q
    ||||||| ||| |||||||||||||| ||||||||| |||||  ||||| |||||||||||| || |||||| || |||||||||||||||||||| |||    
T  9537144 tttaacgtcagtgactaaagtgataatggaagtgcacagtcat-gacttctttgtatttaattctaagtcagagacctatgtgacagcgaggtgcagagt 9537046  T
Q  133 cagggactaaagt 145  Q
     ||||||||||||    
T  9537045 gagggactaaagt 9537033  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #15
Raw Score: 57; E-Value: 9e-24
Query Start/End: Original strand, 33 - 117
Target Start/End: Original strand, 19186221 - 19186305
Alignment:
Q  33 tttaacgacagagactaaagtgataacggaagtgcagagtcagagacttatttgtatttaatcctgagtcagggatctatgtgac 117  Q
    ||||||||||  ||||||||||||||||||| || |||||||||||||| ||||||||||||||| ||||||||| |||||||||    
T  19186221 tttaacgacaaggactaaagtgataacggaaatgtagagtcagagacttgtttgtatttaatcctaagtcagggacctatgtgac 19186305  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #16
Raw Score: 56; E-Value: 4e-23
Query Start/End: Original strand, 48 - 147
Target Start/End: Original strand, 40612675 - 40612774
Alignment:
Q  48 taaagtgataacggaagtgcagagtcagagacttatttgtatttaatcctgagtcagggatctatgtgacagcgaggtgcacagtcagggactaaagtga 147  Q
    ||||||||||||||||||||||||||||  |  ||| ||||||||||||||||||||||| ||| ||||||| ||| |||| | ||||||||||||||||    
T  40612675 taaagtgataacggaagtgcagagtcaggaaaatatctgtatttaatcctgagtcagggacctacgtgacagtgagctgcaaaatcagggactaaagtga 40612774  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #17
Raw Score: 55; E-Value: 1e-22
Query Start/End: Original strand, 36 - 134
Target Start/End: Original strand, 8075837 - 8075935
Alignment:
Q  36 aacgacagagactaaagtgataacggaagtgcagagtcagagacttatttgtatttaatcctgagtcagggatctatgtgacagcgaggtgcacagtca 134  Q
    |||| ||| |||||||||||||||| ||||||||| ||||| |||| ||||||||||||| ||| |||||||||||| | ||||||||||||| |||||    
T  8075837 aacgtcagggactaaagtgataacgaaagtgcagaatcagatacttttttgtatttaatcttgaatcagggatctatctaacagcgaggtgcagagtca 8075935  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #18
Raw Score: 53; E-Value: 2e-21
Query Start/End: Original strand, 41 - 145
Target Start/End: Complemental strand, 18004752 - 18004648
Alignment:
Q  41 cagagactaaagtgataacggaagtgcagagtcagagacttatttgtatttaatcctgagtcagggatctatgtgacagcgaggtgcacagtcagggact 140  Q
    |||||||||||||||||||||||||||||||||| |||| | ||||||||||||||| ||  |  ||  | |||||||| |||||||| |||||||||||    
T  18004752 cagagactaaagtgataacggaagtgcagagtcatagacctctttgtatttaatcctaagctatagacttttgtgacagtgaggtgcagagtcagggact 18004653  T
Q  141 aaagt 145  Q
    |||||    
T  18004652 aaagt 18004648  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #19
Raw Score: 52; E-Value: 9e-21
Query Start/End: Original strand, 41 - 136
Target Start/End: Complemental strand, 544762 - 544668
Alignment:
Q  41 cagagactaaagtgataacggaagtgcagagtcagagacttatttgtatttaatcctgagtcagggatctatgtgacagcgaggtgcacagtcagg 136  Q
    |||| |||||| | ||||||||||||||||||||| |||||||||||||||||||||||||||| || |||| ||||| ||| ||||| |||||||    
T  544762 cagaaactaaatttataacggaagtgcagagtcagtgacttatttgtatttaatcctgagtcagagacctatctgaca-cgaagtgcagagtcagg 544668  T

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Target: chr5; HSP #20
Raw Score: 52; E-Value: 9e-21
Query Start/End: Original strand, 33 - 128
Target Start/End: Complemental strand, 32640410 - 32640315
Alignment:
Q  33 tttaacgacagagactaaagtgataacggaagtgcagagtcagagacttatttgtatttaatcctgagtcagggatctatgtgacagcgaggtgca 128  Q
    ||||||| ||||||||||||||||||| |||||  ||||| || ||||||||||||||||||||||||| | ||  ||||||||||| ||||||||    
T  32640410 tttaacgtcagagactaaagtgataacagaagtttagagttagggacttatttgtatttaatcctgagttatggtcctatgtgacagtgaggtgca 32640315  T

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Target: chr5; HSP #21
Raw Score: 51; E-Value: 3e-20
Query Start/End: Original strand, 33 - 123
Target Start/End: Original strand, 32641727 - 32641817
Alignment:
Q  33 tttaacgacagagactaaagtgataacggaagtgcagagtcagagacttatttgtatttaatcctgagtcagggatctatgtgacagcgag 123  Q
    ||||||| ||| || ||||||||||||||||||||||||||||  |||||||||||||||||| ||||| ||||| ||| |||||| ||||    
T  32641727 tttaacgtcagggattaaagtgataacggaagtgcagagtcagcaacttatttgtatttaatcttgagtaagggacctacgtgacaacgag 32641817  T

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Target: chr5; HSP #22
Raw Score: 47; E-Value: 8e-18
Query Start/End: Original strand, 85 - 147
Target Start/End: Original strand, 13651173 - 13651234
Alignment:
Q  85 tgtatttaatcctgagtcagggatctatgtgacagcgaggtgcacagtcagggactaaagtga 147  Q
    ||||||||||||||||||||||| |||||||||||| ||||||||||||| ||||||||||||    
T  13651173 tgtatttaatcctgagtcagggacctatgtgacagc-aggtgcacagtcaaggactaaagtga 13651234  T

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Target: chr5; HSP #23
Raw Score: 46; E-Value: 3e-17
Query Start/End: Original strand, 42 - 147
Target Start/End: Complemental strand, 16979105 - 16979000
Alignment:
Q  42 agagactaaagtgataacggaagtgcagagtcagagacttatttgtatttaatcctgagtcagggatctatgtgacagcgaggtgcacagtcagggacta 141  Q
    |||||||||| |||||||| |||| |||||| || |||||||||| ||||||| ||||||||  || || |||| |||| ||||||| ||||| ||||||    
T  16979105 agagactaaaatgataacgtaagtacagagttagggacttatttgcatttaattctgagtcaatgacctttgtggcagcaaggtgcaaagtcaaggacta 16979006  T
Q  142 aagtga 147  Q
    ||||||    
T  16979005 aagtga 16979000  T

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Target: chr5; HSP #24
Raw Score: 44; E-Value: 5e-16
Query Start/End: Original strand, 50 - 109
Target Start/End: Original strand, 4594118 - 4594176
Alignment:
Q  50 aagtgataacggaagtgcagagtcagagacttatttgtatttaatcctgagtcagggatc 109  Q
    ||||||||| |||||||||||||||  |||||||||||||||||||||||||||||||||    
T  4594118 aagtgataatggaagtgcagagtcat-gacttatttgtatttaatcctgagtcagggatc 4594176  T

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Target: chr5; HSP #25
Raw Score: 42; E-Value: 0.000000000000008
Query Start/End: Original strand, 42 - 147
Target Start/End: Complemental strand, 13483133 - 13483029
Alignment:
Q  42 agagactaaagtgataacggaagtgcagagtcagagacttatttgtatttaatcctgagtcagggatctatgtgacagcgaggtgcacagtcagggacta 141  Q
    |||||| |||||||||||| ||||||||||| |||||||| ||| ||||||||| ||||||||| | |||| |||  ||||| | || |||| |||||||    
T  13483133 agagacaaaagtgataacgaaagtgcagagtaagagacttctttatatttaatcatgagtcaggaacctatctgaatgcgagatacagagtc-gggacta 13483035  T
Q  142 aagtga 147  Q
    ||||||    
T  13483034 aagtga 13483029  T

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Target: chr5; HSP #26
Raw Score: 39; E-Value: 0.0000000000005
Query Start/End: Original strand, 46 - 92
Target Start/End: Complemental strand, 14881056 - 14881010
Alignment:
Q  46 actaaagtgataacggaagtgcagagtcagagacttatttgtattta 92  Q
    |||||||||||||||||||||||||||||| ||||||||||| ||||    
T  14881056 actaaagtgataacggaagtgcagagtcagggacttatttgtgttta 14881010  T

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Target: chr5; HSP #27
Raw Score: 39; E-Value: 0.0000000000005
Query Start/End: Original strand, 45 - 147
Target Start/End: Original strand, 31947050 - 31947152
Alignment:
Q  45 gactaaagtgataacggaagtgcagagtcagagacttatttgtatttaatcctgagtcagggatctatgtgacagcgaggtgcacagtcagggactaaag 144  Q
    |||||||||||||||||||||  ||||||| |||||| ||||||||||||  | ||| ||| |||||| ||||| | | ||||| | |||| ||||||||    
T  31947050 gactaaagtgataacggaagtctagagtcatagacttgtttgtatttaattttaagtaaggaatctatatgacaacaaagtgcagaatcagagactaaag 31947149  T
Q  145 tga 147  Q
    |||    
T  31947150 tga 31947152  T

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Target: chr5; HSP #28
Raw Score: 37; E-Value: 0.000000000008
Query Start/End: Original strand, 50 - 147
Target Start/End: Original strand, 13483174 - 13483275
Alignment:
Q  50 aagtgataacggaagtgcagagtcagagacttatttgtatttaat----cctgagtcagggatctatgtgacagcgaggtgcacagtcagggactaaagt 145  Q
    ||||||||||||||||||| |||||||||||| ||||||||||||    | |||||||  || ||| ||| |||||||||||| |||||  |||||| ||    
T  13483174 aagtgataacggaagtgcaaagtcagagacttgtttgtatttaattaatcatgagtcaaagacctacgtggcagcgaggtgcagagtcaaagactaacgt 13483273  T
Q  146 ga 147  Q
    ||    
T  13483274 ga 13483275  T

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Target: chr5; HSP #29
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 192 - 259
Target Start/End: Original strand, 28782706 - 28782773
Alignment:
Q  192 actttttaacttttagaaagttgaattcaacatttttcaccatttttcaagaaattatttctatttat 259  Q
    ||||||| ||||||| || ||||||||||||| |||| || |||||| || |||||||||||||||||    
T  28782706 acttttttacttttaaaatgttgaattcaacactttttacaattttttaacaaattatttctatttat 28782773  T

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Target: chr5; HSP #30
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 33 - 115
Target Start/End: Complemental strand, 28589821 - 28589739
Alignment:
Q  33 tttaacgacagagactaaagtgataacggaagtgcagagtcagagacttatttgtatttaatcctgagtcagggatctatgtg 115  Q
    ||||||| ||||||||||| || |||||||||| || ||||| | |  ||||||||||||||  ||||||||||| |||||||    
T  28589821 tttaacgtcagagactaaaatggtaacggaagtacaaagtcaaaaatgtatttgtatttaattatgagtcagggacctatgtg 28589739  T

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Target: chr5; HSP #31
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 207 - 263
Target Start/End: Original strand, 10317259 - 10317315
Alignment:
Q  207 gaaagttgaattcaacatttttcaccatttttcaagaaattatttctatttatgttc 263  Q
    ||||||||||||||||| |||||| |||||||||| | ||| ||||||||| |||||    
T  10317259 gaaagttgaattcaacacttttcatcatttttcaacacattctttctatttttgttc 10317315  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #32
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 110 - 147
Target Start/End: Original strand, 24900410 - 24900447
Alignment:
Q  110 tatgtgacagcgaggtgcacagtcagggactaaagtga 147  Q
    ||||||||||||||||||| |||||||||| |||||||    
T  24900410 tatgtgacagcgaggtgcagagtcagggaccaaagtga 24900447  T

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Target: chr3 (Bit Score: 79; Significance: 7e-37; HSPs: 46)
Name: chr3
Description:

Target: chr3; HSP #1
Raw Score: 79; E-Value: 7e-37
Query Start/End: Original strand, 33 - 147
Target Start/End: Complemental strand, 17700640 - 17700526
Alignment:
Q  33 tttaacgacagagactaaagtgataacggaagtgcagagtcagagacttatttgtatttaatcctgagtcagggatctatgtgacagcgaggtgcacagt 132  Q
    ||||||| ||| ||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||| | |||||||||| ||||||||| |||    
T  17700640 tttaacgtcagggactaaagtgataacggaagtgcagagtcagggacttatttgtatttaatcctgagtcaggaacctatgtgacaacgaggtgcagagt 17700541  T
Q  133 cagggactaaagtga 147  Q
    ||  |||||||||||    
T  17700540 caaagactaaagtga 17700526  T

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Target: chr3; HSP #2
Raw Score: 79; E-Value: 7e-37
Query Start/End: Original strand, 45 - 147
Target Start/End: Complemental strand, 48573095 - 48572993
Alignment:
Q  45 gactaaagtgataacggaagtgcagagtcagagacttatttgtatttaatcctgagtcagggatctatgtgacagcgaggtgcacagtcagggactaaag 144  Q
    ||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||| |||||||| | ||||||||| |||||||||| ||||    
T  48573095 gactaaagtgataacggaagtgcagagtcagaggcttatttgtatttaatcctgagtcagggacctatgtgataacgaggtgcagagtcagggaccaaag 48572996  T
Q  145 tga 147  Q
    |||    
T  48572995 tga 48572993  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #3
Raw Score: 75; E-Value: 2e-34
Query Start/End: Original strand, 33 - 147
Target Start/End: Original strand, 17701920 - 17702034
Alignment:
Q  33 tttaacgacagagactaaagtgataacggaagtgcagagtcagagacttatttgtatttaatcctgagtcagggatctatgtgacagcgaggtgcacagt 132  Q
    ||||||| ||| ||||||||||||||||||||||||||||||| ||||||||||||||||||| ||||||||||| |||| |||||||||| |||| | |    
T  17701920 tttaacgtcagggactaaagtgataacggaagtgcagagtcagggacttatttgtatttaatcttgagtcagggacctatatgacagcgagctgcagaat 17702019  T
Q  133 cagggactaaagtga 147  Q
    ||| |||||||||||    
T  17702020 cagagactaaagtga 17702034  T

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Target: chr3; HSP #4
Raw Score: 75; E-Value: 2e-34
Query Start/End: Original strand, 33 - 147
Target Start/End: Complemental strand, 36279074 - 36278960
Alignment:
Q  33 tttaacgacagagactaaagtgataacggaagtgcagagtcagagacttatttgtatttaatcctgagtcagggatctatgtgacagcgaggtgcacagt 132  Q
    ||||||| ||| ||||||| ||||||||||||||||||||||||||||||||||||||||||||||| ||||||| |||||||||| |||| || | | |    
T  36279074 tttaacgtcagggactaaaatgataacggaagtgcagagtcagagacttatttgtatttaatcctgaatcagggacctatgtgacaacgagctgtataat 36278975  T
Q  133 cagggactaaagtga 147  Q
    |||||||||||||||    
T  36278974 cagggactaaagtga 36278960  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #5
Raw Score: 75; E-Value: 2e-34
Query Start/End: Original strand, 33 - 147
Target Start/End: Original strand, 52318318 - 52318432
Alignment:
Q  33 tttaacgacagagactaaagtgataacggaagtgcagagtcagagacttatttgtatttaatcctgagtcagggatctatgtgacagcgaggtgcacagt 132  Q
    ||||||| ||| ||||||||| ||| | ||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||| ||||| |||    
T  52318318 tttaacgtcagggactaaagtaatatcagaagtgcagagtcagggacttatttgtatttaatcctgagtcagggatctatgtgacagcgaagtgcagagt 52318417  T
Q  133 cagggactaaagtga 147  Q
    ||| ||| |||||||    
T  52318418 cagagaccaaagtga 52318432  T

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Target: chr3; HSP #6
Raw Score: 74; E-Value: 6e-34
Query Start/End: Original strand, 34 - 123
Target Start/End: Original strand, 11773053 - 11773142
Alignment:
Q  34 ttaacgacagagactaaagtgataacggaagtgcagagtcagagacttatttgtatttaatcctgagtcagggatctatgtgacagcgag 123  Q
    |||||| ||| |||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||| |||||||||||||||    
T  11773053 ttaacgccagggactaaagtgataacggaagtgtagagtcagagacttatttgtatttaatcctgagtcagggacctatgtgacagcgag 11773142  T

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Target: chr3; HSP #7
Raw Score: 71; E-Value: 4e-32
Query Start/End: Original strand, 45 - 147
Target Start/End: Complemental strand, 2591737 - 2591635
Alignment:
Q  45 gactaaagtgataacggaagtgcagagtcagagacttatttgtatttaatcctgagtcagggatctatgtgacagcgaggtgcacagtcagggactaaag 144  Q
    |||||||||||| | |||||||||||||||||||||| ||||||||||||||||||||||||| |||||||||||| || |||| | |||||||||||||    
T  2591737 gactaaagtgatcatggaagtgcagagtcagagacttgtttgtatttaatcctgagtcagggacctatgtgacagcaagctgcagaatcagggactaaag 2591638  T
Q  145 tga 147  Q
    |||    
T  2591637 tga 2591635  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #8
Raw Score: 71; E-Value: 4e-32
Query Start/End: Original strand, 45 - 147
Target Start/End: Original strand, 45600952 - 45601053
Alignment:
Q  45 gactaaagtgataacggaagtgcagagtcagagacttatttgtatttaatcctgagtcagggatctatgtgacagcgaggtgcacagtcagggactaaag 144  Q
    ||||||||||||||||||||||||||||||| ||||| ||||||||||||||||| ||||||| ||||||||||||||||  || |||||||||||||||    
T  45600952 gactaaagtgataacggaagtgcagagtcag-gacttctttgtatttaatcctgaatcagggacctatgtgacagcgagggacagagtcagggactaaag 45601050  T
Q  145 tga 147  Q
    |||    
T  45601051 tga 45601053  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #9
Raw Score: 71; E-Value: 4e-32
Query Start/End: Original strand, 33 - 147
Target Start/End: Original strand, 47118052 - 47118166
Alignment:
Q  33 tttaacgacagagactaaagtgataacggaagtgcagagtcagagacttatttgtatttaatcctgagtcagggatctatgtgacagcgaggtgcacagt 132  Q
    ||||||| ||| |||||||||||||||| |||||||||||||||||||| |||| ||||||||||||||| ||||  ||| ||||| ||||||||| |||    
T  47118052 tttaacgtcagggactaaagtgataacgaaagtgcagagtcagagacttctttgcatttaatcctgagtcggggacttatatgacaacgaggtgcagagt 47118151  T
Q  133 cagggactaaagtga 147  Q
    |||||||||||||||    
T  47118152 cagggactaaagtga 47118166  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #10
Raw Score: 71; E-Value: 4e-32
Query Start/End: Original strand, 33 - 147
Target Start/End: Complemental strand, 55388195 - 55388081
Alignment:
Q  33 tttaacgacagagactaaagtgataacggaagtgcagagtcagagacttatttgtatttaatcctgagtcagggatctatgtgacagcgaggtgcacagt 132  Q
    ||||||| ||| ||||||||||||||||| |||||||||||||  ||||||||||||||||||||||||||| || |||| |||||||||| |||| | |    
T  55388195 tttaacgtcagggactaaagtgataacgggagtgcagagtcagtaacttatttgtatttaatcctgagtcagagacctatatgacagcgagctgcagaat 55388096  T
Q  133 cagggactaaagtga 147  Q
    |||||||||||||||    
T  55388095 cagggactaaagtga 55388081  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #11
Raw Score: 67; E-Value: 1e-29
Query Start/End: Original strand, 45 - 147
Target Start/End: Original strand, 2592020 - 2592122
Alignment:
Q  45 gactaaagtgataacggaagtgcagagtcagagacttatttgtatttaatcctgagtcagggatctatgtgacagcgaggtgcacagtcagggactaaag 144  Q
    |||||||||||||||||||||   ||||||| ||||||||||||||||||||||||||||||| ||||||||||||||| |||| | | |||||||||||    
T  2592020 gactaaagtgataacggaagtattgagtcagggacttatttgtatttaatcctgagtcagggacctatgtgacagcgagctgcagaattagggactaaag 2592119  T
Q  145 tga 147  Q
    |||    
T  2592120 tga 2592122  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #12
Raw Score: 67; E-Value: 1e-29
Query Start/End: Original strand, 33 - 147
Target Start/End: Complemental strand, 19114655 - 19114541
Alignment:
Q  33 tttaacgacagagactaaagtgataacggaagtgcagagtcagagacttatttgtatttaatcctgagtcagggatctatgtgacagcgaggtgcacagt 132  Q
    |||||||  ||||||||||||||||||||||||||| ||| || ||||| ||||||||||||| ||||||||||| || ||||||| ||| ||||| |||    
T  19114655 tttaacgtaagagactaaagtgataacggaagtgcaaagttagtgacttctttgtatttaatcttgagtcagggacctctgtgacaacgaagtgcagagt 19114556  T
Q  133 cagggactaaagtga 147  Q
    |||||||||||||||    
T  19114555 cagggactaaagtga 19114541  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #13
Raw Score: 65; E-Value: 1e-28
Query Start/End: Original strand, 182 - 294
Target Start/End: Original strand, 21814202 - 21814312
Alignment:
Q  182 ggaaattattactttttaacttttagaaagttgaattcaacatttttcaccatttttcaagaaattatttctatttatgttcctcttaaccaatgcacaa 281  Q
    ||||||||| ||||||| ||||||||||| |||||||||||| ||||||||| ||||||| ||||||||||||||||||||  ||||||||||||| |||    
T  21814202 ggaaattataactttttgacttttagaaaattgaattcaacacttttcaccacttttcaacaaattatttctatttatgtt-atcttaaccaatgcccaa 21814300  T
Q  282 aggacactcttta 294  Q
    | |||||||||||    
T  21814301 a-gacactcttta 21814312  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #14
Raw Score: 64; E-Value: 6e-28
Query Start/End: Original strand, 48 - 147
Target Start/End: Complemental strand, 34263912 - 34263813
Alignment:
Q  48 taaagtgataacggaagtgcagagtcagagacttatttgtatttaatcctgagtcagggatctatgtgacagcgaggtgcacagtcagggactaaagtga 147  Q
    ||||||||||| ||||||| |||||||||||||||||||||||||||||||| ||| ||| || ||||||||||||||||| |||||||| | |||||||    
T  34263912 taaagtgataatggaagtgtagagtcagagacttatttgtatttaatcctgaatcaaggacctctgtgacagcgaggtgcagagtcaggggccaaagtga 34263813  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #15
Raw Score: 64; E-Value: 6e-28
Query Start/End: Original strand, 33 - 116
Target Start/End: Original strand, 36280318 - 36280401
Alignment:
Q  33 tttaacgacagagactaaagtgataacggaagtgcagagtcagagacttatttgtatttaatcctgagtcagggatctatgtga 116  Q
    ||||||| ||| ||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||| || ||||||||    
T  36280318 tttaacgtcagggactaaagtgataacggaagtgcagagtcagagacttatttatatttaatcctgagtcagagacctatgtga 36280401  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #16
Raw Score: 63; E-Value: 2e-27
Query Start/End: Original strand, 45 - 147
Target Start/End: Original strand, 33428448 - 33428550
Alignment:
Q  45 gactaaagtgataacggaagtgcagagtcagagacttatttgtatttaatcctgagtcagggatctatgtgacagcgaggtgcacagtcagggactaaag 144  Q
    ||||||||||| ||||||| ||||||||||  ||||| |||||||||||| |||||||||||| |||||||||| ||||||||| |||||||||| ||||    
T  33428448 gactaaagtgacaacggaaatgcagagtcaaggacttctttgtatttaattctgagtcagggacctatgtgacaacgaggtgcagagtcagggacgaaag 33428547  T
Q  145 tga 147  Q
    |||    
T  33428548 tga 33428550  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #17
Raw Score: 63; E-Value: 2e-27
Query Start/End: Original strand, 33 - 147
Target Start/End: Complemental strand, 50753939 - 50753825
Alignment:
Q  33 tttaacgacagagactaaagtgataacggaagtgcagagtcagagacttatttgtatttaatcctgagtcagggatctatgtgacagcgaggtgcacagt 132  Q
    ||||||| ||| ||||||||||||||| |||||| ||||||||| |||| ||| ||||||||||||| | ||||| |||||||||||||||||||| ||     
T  50753939 tttaacggcagggactaaagtgataacagaagtgtagagtcagaaacttgtttatatttaatcctgaattagggacctatgtgacagcgaggtgcagagc 50753840  T
Q  133 cagggactaaagtga 147  Q
     ||||||||||||||    
T  50753839 tagggactaaagtga 50753825  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #18
Raw Score: 62; E-Value: 9e-27
Query Start/End: Original strand, 45 - 146
Target Start/End: Complemental strand, 20464179 - 20464078
Alignment:
Q  45 gactaaagtgataacggaagtgcagagtcagagacttatttgtatttaatcctgagtcagggatctatgtgacagcgaggtgcacagtcagggactaaag 144  Q
    ||||||||||||||| ||||||||||||||| ||||| ||||||||||||| |||| |||||| || ||||||| ||||||||| |||| ||||||||||    
T  20464179 gactaaagtgataacagaagtgcagagtcagggacttctttgtatttaatcatgagccagggacctttgtgacaacgaggtgcagagtcggggactaaag 20464080  T
Q  145 tg 146  Q
    ||    
T  20464079 tg 20464078  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #19
Raw Score: 61; E-Value: 4e-26
Query Start/End: Original strand, 194 - 294
Target Start/End: Complemental strand, 15502721 - 15502622
Alignment:
Q  194 tttttaacttttagaaagttgaattcaacatttttcaccatttttcaagaaattatttctatttatgttcctcttaaccaatgcacaaaggacactcttt 293  Q
    ||||||||||||| ||||||||||||||||||||| |||||||||||| ||||||||||||||| |||| |||||||||||||    |||||||||||||    
T  15502721 tttttaacttttaaaaagttgaattcaacattttttaccatttttcaacaaattatttctatttttgtt-ctcttaaccaatgtctcaaggacactcttt 15502623  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #20
Raw Score: 59; E-Value: 6e-25
Query Start/End: Original strand, 33 - 147
Target Start/End: Original strand, 47075352 - 47075466
Alignment:
Q  33 tttaacgacagagactaaagtgataacggaagtgcagagtcagagacttatttgtatttaatcctgagtcagggatctatgtgacagcgaggtgcacagt 132  Q
    ||||||| |||||||||||||||||||||||||| |||||||| |  || ||||||||||||| ||||| | ||| |||||||||| ||||||||| |||    
T  47075352 tttaacgtcagagactaaagtgataacggaagtgtagagtcaggggtttctttgtatttaatcttgagtgacggacctatgtgacaacgaggtgcagagt 47075451  T
Q  133 cagggactaaagtga 147  Q
    || ||| ||||||||    
T  47075452 caaggattaaagtga 47075466  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #21
Raw Score: 59; E-Value: 6e-25
Query Start/End: Original strand, 33 - 119
Target Start/End: Original strand, 53959101 - 53959187
Alignment:
Q  33 tttaacgacagagactaaagtgataacggaagtgcagagtcagagacttatttgtatttaatcctgagtcagggatctatgtgacag 119  Q
    ||||||| ||||||||||||||||||||||||||||||||||   |||||||||||||||||| |||||||| || |||||||||||    
T  53959101 tttaacgtcagagactaaagtgataacggaagtgcagagtcatgaacttatttgtatttaatcatgagtcagagacctatgtgacag 53959187  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #22
Raw Score: 59; E-Value: 6e-25
Query Start/End: Original strand, 45 - 147
Target Start/End: Original strand, 55389482 - 55389584
Alignment:
Q  45 gactaaagtgataacggaagtgcagagtcagagacttatttgtatttaatcctgagtcagggatctatgtgacagcgaggtgcacagtcagggactaaag 144  Q
    |||||||||||||||||||||| |||||||| |||||| |||||||||||  |||||||  || |||||||||||||||||||| ||| |||||| ||||    
T  55389482 gactaaagtgataacggaagtgtagagtcagggacttaattgtatttaattttgagtcaatgacctatgtgacagcgaggtgcagagttagggaccaaag 55389581  T
Q  145 tga 147  Q
    |||    
T  55389582 tga 55389584  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #23
Raw Score: 56; E-Value: 4e-23
Query Start/End: Original strand, 195 - 294
Target Start/End: Original strand, 41998907 - 41999005
Alignment:
Q  195 ttttaacttttagaaagttgaattcaacatttttcaccatttttcaagaaattatttctatttatgttcctcttaaccaatgcacaaaggacactcttta 294  Q
    |||| ||||||| ||||||||||| |||| ||||||||||||||||| |||||||||||||||||||| |||||||||||||  | |||| |||||||||    
T  41998907 tttttacttttataaagttgaatttaacacttttcaccatttttcaacaaattatttctatttatgtt-ctcttaaccaatgtcccaagggcactcttta 41999005  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #24
Raw Score: 55; E-Value: 1e-22
Query Start/End: Original strand, 198 - 276
Target Start/End: Original strand, 1165784 - 1165861
Alignment:
Q  198 taacttttagaaagttgaattcaacatttttcaccatttttcaagaaattatttctatttatgttcctcttaaccaatg 276  Q
    ||||||||||||||||||||||||||||||||| || ||||||| |||||||||||||||||||| ||| |||||||||    
T  1165784 taacttttagaaagttgaattcaacatttttcatcacttttcaacaaattatttctatttatgtt-ctcataaccaatg 1165861  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #25
Raw Score: 55; E-Value: 1e-22
Query Start/End: Original strand, 33 - 147
Target Start/End: Complemental strand, 3671160 - 3671047
Alignment:
Q  33 tttaacgacagagactaaagtgataacggaagtgcagagtcagagacttatttgtatttaatcctgagtcagggatctatgtgacagcgaggtgcacagt 132  Q
    ||||||| ||| || ||||||||||||||||||| ||||||| ||||||||||||||||||| ||||||||| || || ||||| || |||||||| |||    
T  3671160 tttaacggcagggattaaagtgataacggaagtggagagtcatagacttatttgtatttaattctgagtcagagacctttgtgatagagaggtgcaaagt 3671061  T
Q  133 cagggactaaagtga 147  Q
    || ||| ||||||||    
T  3671060 caagga-taaagtga 3671047  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #26
Raw Score: 55; E-Value: 1e-22
Query Start/End: Original strand, 45 - 107
Target Start/End: Original strand, 48574472 - 48574534
Alignment:
Q  45 gactaaagtgataacggaagtgcagagtcagagacttatttgtatttaatcctgagtcaggga 107  Q
    |||||||||||||||| |||||||||||||| |||||||||||||||||||||||||||||||    
T  48574472 gactaaagtgataacgaaagtgcagagtcagggacttatttgtatttaatcctgagtcaggga 48574534  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #27
Raw Score: 55; E-Value: 1e-22
Query Start/End: Original strand, 34 - 118
Target Start/End: Original strand, 49261539 - 49261620
Alignment:
Q  34 ttaacgacagagactaaagtgataacggaagtgcagagtcagagacttatttgtatttaatcctgagtcagggatctatgtgaca 118  Q
    |||||| ||||||||||||||||||||||| |||||||| ||||||   ||||||||||||||||||||||||| ||||||||||    
T  49261539 ttaacgtcagagactaaagtgataacggaaatgcagagttagagac---tttgtatttaatcctgagtcagggacctatgtgaca 49261620  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #28
Raw Score: 55; E-Value: 1e-22
Query Start/End: Original strand, 45 - 147
Target Start/End: Complemental strand, 52317089 - 52316987
Alignment:
Q  45 gactaaagtgataacggaagtgcagagtcagagacttatttgtatttaatcctgagtcagggatctatgtgacagcgaggtgcacagtcagggactaaag 144  Q
    ||||||| |||||||||| ||||||||| | |||||||||||||||||||| |||||||| || |||| |||||||||| |||| | |||| ||||||||    
T  52317089 gactaaaatgataacggaggtgcagagttaaagacttatttgtatttaatcatgagtcagagacctatatgacagcgagctgcagaatcagagactaaag 52316990  T
Q  145 tga 147  Q
    |||    
T  52316989 tga 52316987  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #29
Raw Score: 53; E-Value: 2e-21
Query Start/End: Original strand, 45 - 141
Target Start/End: Complemental strand, 48808476 - 48808380
Alignment:
Q  45 gactaaagtgataacggaagtgcagagtcagagacttatttgtatttaatcctgagtcagggatctatgtgacagcgaggtgcacagtcagggacta 141  Q
    ||||||||||| |||||||||||||||| ||  ||||||||||||||||||||||||||| || |||| | |||||||| |||| | ||||||||||    
T  48808476 gactaaagtgacaacggaagtgcagagttaggaacttatttgtatttaatcctgagtcagagacctatctaacagcgagctgcagaatcagggacta 48808380  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #30
Raw Score: 51; E-Value: 3e-20
Query Start/End: Original strand, 194 - 276
Target Start/End: Original strand, 15005830 - 15005911
Alignment:
Q  194 tttttaacttttagaaagttgaattcaacatttttcaccatttttcaagaaattatttctatttatgttcctcttaaccaatg 276  Q
    ||||||||||||| |||||||||||||||| |||| |||||||||| | ||||||||||| |||||||| |||||||||||||    
T  15005830 tttttaacttttacaaagttgaattcaacactttttaccatttttccataaattatttctgtttatgtt-ctcttaaccaatg 15005911  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #31
Raw Score: 51; E-Value: 3e-20
Query Start/End: Original strand, 45 - 147
Target Start/End: Original strand, 19115160 - 19115261
Alignment:
Q  45 gactaaagtgataacggaagtgcagagtcagagacttatttgtatttaatcctgagtcagggatctatgtgacagcgaggtgcacagtcagggactaaag 144  Q
    ||||||||| | ||||||||||||||||||  ||||| ||||||||||||||||||| | ||| |||||||||| ||||||||| ||||| | |||||||    
T  19115160 gactaaagtaaaaacggaagtgcagagtcat-gacttctttgtatttaatcctgagtgaaggacctatgtgacatcgaggtgcagagtcacgaactaaag 19115258  T
Q  145 tga 147  Q
    |||    
T  19115259 tga 19115261  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #32
Raw Score: 50; E-Value: 1e-19
Query Start/End: Original strand, 182 - 279
Target Start/End: Original strand, 3084012 - 3084107
Alignment:
Q  182 ggaaattattactttttaacttttagaaagttgaattcaacatttttcaccatttttcaagaaattatttctatttatgttcctcttaaccaatgcac 279  Q
    ||||||||  ||||||||| |||||||||||| || |||||| |||| |||||||||||| ||||||| |||||||||||| ||||||||||||||||    
T  3084012 ggaaattacaactttttaa-ttttagaaagttaaactcaacactttttaccatttttcaacaaattatatctatttatgtt-ctcttaaccaatgcac 3084107  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #33
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 195 - 294
Target Start/End: Complemental strand, 34060850 - 34060751
Alignment:
Q  195 ttttaacttttagaaagttgaattcaacatttttcaccatttttcaagaaattatttctatttatgttcctcttaaccaatgcacaaaggacactcttta 294  Q
    |||||||||||| |||||| |||||| || ||||||||||||||||| | | ||||| ||||| |  || ||||||||||||||| ||||||||||||||    
T  34060850 ttttaacttttaaaaagttaaattcatcacttttcaccatttttcaatacaatatttttattttttatcttcttaaccaatgcaccaaggacactcttta 34060751  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #34
Raw Score: 47; E-Value: 8e-18
Query Start/End: Original strand, 80 - 146
Target Start/End: Complemental strand, 19331183 - 19331117
Alignment:
Q  80 ttatttgtatttaatcctgagtcagggatctatgtgacagcgaggtgcacagtcagggactaaagtg 146  Q
    |||||||||||||||||||||||||||| |||||||||||| ||||||| ||||||| || ||||||    
T  19331183 ttatttgtatttaatcctgagtcagggacctatgtgacagcaaggtgcagagtcaggaacgaaagtg 19331117  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #35
Raw Score: 44; E-Value: 5e-16
Query Start/End: Original strand, 60 - 147
Target Start/End: Complemental strand, 53957769 - 53957683
Alignment:
Q  60 ggaagtgcagagtcagagacttatttgtatttaatcctgagtcagggatctatgtgacagcgaggtgcacagtcagggactaaagtga 147  Q
    ||||||||||||||| |||||||||||||||| ||||||||||||| | |||||| |||||||| |||| | ||| | ||||||||||    
T  53957769 ggaagtgcagagtcatagacttatttgtattt-atcctgagtcaggaacctatgtaacagcgagttgcagaatcaagtactaaagtga 53957683  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #36
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 41 - 123
Target Start/End: Original strand, 36827484 - 36827566
Alignment:
Q  41 cagagactaaagtgataacggaagtgcagagtcagagacttatttgtatttaatcctgagtcagggatctatgtgacagcgag 123  Q
    |||||||||||||||||||||||||| | | ||||||| |  ||| ||||||||||||||||| |||||| ||| ||||||||    
T  36827484 cagagactaaagtgataacggaagtgtacattcagagattattttatatttaatcctgagtcaaggatctttgtcacagcgag 36827566  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #37
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 56 - 130
Target Start/End: Complemental strand, 47427959 - 47427885
Alignment:
Q  56 taacggaagtgcagagtcagagacttatttgtatttaatcctgagtcagggatctatgtgacagcgaggtgcaca 130  Q
    ||||| ||||||| |||||| ||||| ||||||||||||  ||||||| ||| ||||||||||||||||||||||    
T  47427959 taacgtaagtgcacagtcagggacttctttgtatttaattttgagtcaaggacctatgtgacagcgaggtgcaca 47427885  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #38
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 44 - 147
Target Start/End: Original strand, 47428575 - 47428672
Alignment:
Q  44 agactaaagtgataacggaagtgcagagtcagagacttatttgtatttaatcctgagtcagggatctatgtgacagcgaggtgcacagtcagggactaaa 143  Q
    ||||| |||||||||||||||||||||||||  ||||| |||      |||| ||||||| ||| ||||||||||| |||||||| ||||||||| ||||    
T  47428575 agactgaagtgataacggaagtgcagagtcaatgacttcttt------aatcttgagtcacggacctatgtgacagagaggtgcaaagtcagggattaaa 47428668  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #39
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 194 - 276
Target Start/End: Complemental strand, 21195364 - 21195283
Alignment:
Q  194 tttttaacttttagaaagttgaattcaacatttttcaccatttttcaagaaattatttctatttatgttcctcttaaccaatg 276  Q
    ||||||||||||| ||||||||||||| || |||||| || ||| ||| ||  ||||||||||| ||||||| ||||||||||    
T  21195364 tttttaacttttaaaaagttgaattcaccacttttcatcactttccaacaagatatttctatttttgttcct-ttaaccaatg 21195283  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #40
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 46 - 116
Target Start/End: Complemental strand, 33427860 - 33427791
Alignment:
Q  46 actaaagtgataacggaagtgcagagtcagagacttatttgtatttaatcctgagtcagggatctatgtga 116  Q
    ||||||||||||||| |||||||||||||| |  | |||||||||||||||||| ||| ||| ||||||||    
T  33427860 actaaagtgataacgaaagtgcagagtcag-ggttaatttgtatttaatcctgaatcaaggacctatgtga 33427791  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #41
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 33 - 118
Target Start/End: Complemental strand, 39497329 - 39497244
Alignment:
Q  33 tttaacgacagagactaaagtgataacggaagtgcagagtcagagacttatttgtatttaatcctgagtcagggatctatgtgaca 118  Q
    |||||||||||||| |||| |||||||| ||||||| | |||   |||  ||||||||||||||||||||| ||| || |||||||    
T  39497329 tttaacgacagagattaaactgataacgaaagtgcacattcaataactattttgtatttaatcctgagtcatggacctttgtgaca 39497244  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #42
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 45 - 143
Target Start/End: Complemental strand, 40205992 - 40205893
Alignment:
Q  45 gactaaagtgataacggaagtgcagagtcagagacttatttgtatttaatcctgagtc-agggatctatgtgacagcgaggtgcacagtcagggactaaa 143  Q
    ||||||| |||||||||||||||| | |||||||||  ||||| ||||||| |||||| || || || | |||||||||| | || |||| |||||||||    
T  40205992 gactaaactgataacggaagtgcacattcagagactactttgtttttaatcgtgagtcaagagacctttatgacagcgagctacagagtccgggactaaa 40205893  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #43
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 197 - 264
Target Start/End: Complemental strand, 54143889 - 54143822
Alignment:
Q  197 ttaacttttagaaagttgaattcaacatttttcaccatttttcaagaaattatttctatttatgttcc 264  Q
    |||||||||| ||||||||||| | ||||||||| || ||||||| ||  ||||||||||| ||||||    
T  54143889 ttaacttttaaaaagttgaatttaccatttttcatcacttttcaataagatatttctatttttgttcc 54143822  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #44
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 199 - 253
Target Start/End: Complemental strand, 22455423 - 22455369
Alignment:
Q  199 aacttttagaaagttgaattcaacatttttcaccatttttcaagaaattatttct 253  Q
    |||||||||||||||||||| || ||||||||||| |||| || | |||||||||    
T  22455423 aacttttagaaagttgaatttaatatttttcaccactttttaatacattatttct 22455369  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #45
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 45 - 75
Target Start/End: Original strand, 48809667 - 48809697
Alignment:
Q  45 gactaaagtgataacggaagtgcagagtcag 75  Q
    |||||||||||||||||||||||||||||||    
T  48809667 gactaaagtgataacggaagtgcagagtcag 48809697  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #46
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 192 - 241
Target Start/End: Original strand, 28954253 - 28954302
Alignment:
Q  192 actttttaacttttagaaagttgaattcaacatttttcaccatttttcaa 241  Q
    |||||| |||||||||| |||||||||||||| ||| |||||||| ||||    
T  28954253 acttttaaacttttagacagttgaattcaacactttccaccatttatcaa 28954302  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4 (Bit Score: 75; Significance: 2e-34; HSPs: 32)
Name: chr4
Description:

Target: chr4; HSP #1
Raw Score: 75; E-Value: 2e-34
Query Start/End: Original strand, 45 - 147
Target Start/End: Original strand, 53771062 - 53771164
Alignment:
Q  45 gactaaagtgataacggaagtgcagagtcagagacttatttgtatttaatcctgagtcagggatctatgtgacagcgaggtgcacagtcagggactaaag 144  Q
    ||||||||||||||||||||||||||||||| | ||| |||||||||||| |||||||||||| |||||||||| ||||||||| |||||||||||||||    
T  53771062 gactaaagtgataacggaagtgcagagtcaggggcttctttgtatttaattctgagtcagggacctatgtgacaacgaggtgcagagtcagggactaaag 53771161  T
Q  145 tga 147  Q
    |||    
T  53771162 tga 53771164  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #2
Raw Score: 71; E-Value: 4e-32
Query Start/End: Original strand, 45 - 147
Target Start/End: Original strand, 47878497 - 47878599
Alignment:
Q  45 gactaaagtgataacggaagtgcagagtcagagacttatttgtatttaatcctgagtcagggatctatgtgacagcgaggtgcacagtcagggactaaag 144  Q
    |||||||||||||||||||||| |||||||| |||||||||||||||||||| |||||||||| |||||| ||||||||||||| |||||||||  ||||    
T  47878497 gactaaagtgataacggaagtgtagagtcagggacttatttgtatttaatccagagtcagggacctatgtaacagcgaggtgcagagtcagggatcaaag 47878596  T
Q  145 tga 147  Q
    |||    
T  47878597 tga 47878599  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #3
Raw Score: 69; E-Value: 6e-31
Query Start/End: Original strand, 45 - 158
Target Start/End: Complemental strand, 47874674 - 47874559
Alignment:
Q  45 gactaaagtgataacggaagtgcagagtcagagacttatttgtatttaatcctgagtcagggatctatgtgacagcgaggtgcacagtcagggactaaag 144  Q
    |||||||||||||||||||||||||| |||| ||||||||||||||||||| ||||||||||| |||||||| |||||| |||| | |||| ||||||||    
T  47874674 gactaaagtgataacggaagtgcagaatcagggacttatttgtatttaatcttgagtcagggacctatgtgatagcgagctgcagaatcagagactaaag 47874575  T
Q  145 tga--atttactcaaa 158  Q
    |||  |||||||||||    
T  47874574 tgactatttactcaaa 47874559  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #4
Raw Score: 68; E-Value: 2e-30
Query Start/End: Original strand, 36 - 147
Target Start/End: Complemental strand, 31844841 - 31844730
Alignment:
Q  36 aacgacagagactaaagtgataacggaagtgcagagtcagagacttatttgtatttaatcctgagtcagggatctatgtgacagcgaggtgcacagtcag 135  Q
    |||||||| ||| |||||||||| ||||||| ||||| || ||||| ||||||||||||||||||||||||| |||||||||||||||||||| ||  ||    
T  31844841 aacgacagtgaccaaagtgataagggaagtgtagagttagggacttgtttgtatttaatcctgagtcagggacctatgtgacagcgaggtgcagagctag 31844742  T
Q  136 ggactaaagtga 147  Q
    ||||||||||||    
T  31844741 ggactaaagtga 31844730  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #5
Raw Score: 67; E-Value: 1e-29
Query Start/End: Original strand, 33 - 147
Target Start/End: Complemental strand, 42278171 - 42278057
Alignment:
Q  33 tttaacgacagagactaaagtgataacggaagtgcagagtcagagacttatttgtatttaatcctgagtcagggatctatgtgacagcgaggtgcacagt 132  Q
    ||||||| ||| || ||||||||||||||||||||||||||||  ||||||||||||||||||| |||||||||| |||||||||||| || |||| | |    
T  42278171 tttaacgtcagggattaaagtgataacggaagtgcagagtcaggaacttatttgtatttaatcccgagtcagggacctatgtgacagcaagctgcagaat 42278072  T
Q  133 cagggactaaagtga 147  Q
    || ||||||||||||    
T  42278071 caaggactaaagtga 42278057  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #6
Raw Score: 67; E-Value: 1e-29
Query Start/End: Original strand, 33 - 147
Target Start/End: Complemental strand, 53770455 - 53770341
Alignment:
Q  33 tttaacgacagagactaaagtgataacggaagtgcagagtcagagacttatttgtatttaatcctgagtcagggatctatgtgacagcgaggtgcacagt 132  Q
    ||||||| ||||||||| |||||||| ||||||||||||||| |||||| |||||||||||| |||||||||| | ||||||||  |||||||||| |||    
T  53770455 tttaacggcagagactagagtgataatggaagtgcagagtcatagacttctttgtatttaattctgagtcaggaacctatgtgaatgcgaggtgcagagt 53770356  T
Q  133 cagggactaaagtga 147  Q
    ||| |||||||||||    
T  53770355 cagagactaaagtga 53770341  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #7
Raw Score: 63; E-Value: 2e-27
Query Start/End: Original strand, 45 - 147
Target Start/End: Original strand, 26172955 - 26173057
Alignment:
Q  45 gactaaagtgataacggaagtgcagagtcagagacttatttgtatttaatcctgagtcagggatctatgtgacagcgaggtgcacagtcagggactaaag 144  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||| ||| || | ||||||  ||||||| |||  ||||||||||    
T  26172955 gactaaagtgataacggaagtgcagagtcagagacttatttgtatttaatcttgagtcaaggacctttctgacagtaaggtgcatagttggggactaaag 26173054  T
Q  145 tga 147  Q
    |||    
T  26173055 tga 26173057  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #8
Raw Score: 61; E-Value: 4e-26
Query Start/End: Original strand, 33 - 145
Target Start/End: Complemental strand, 39869042 - 39868932
Alignment:
Q  33 tttaacgacagagactaaagtgataacggaagtgcagagtcagagacttatttgtatttaatcctgagtcagggatctatgtgacagcgaggtgcacagt 132  Q
    ||||||| ||||||||||||||||||||||||||||||||| || |||| ||||||||||||  ||||||||||| || ||| ||||||||||||| |||    
T  39869042 tttaacgtcagagactaaagtgataacggaagtgcagagtc-ga-acttgtttgtatttaattatgagtcagggacctttgtaacagcgaggtgcagagt 39868945  T
Q  133 cagggactaaagt 145  Q
    ||| |||||||||    
T  39868944 cagagactaaagt 39868932  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #9
Raw Score: 59; E-Value: 6e-25
Query Start/End: Original strand, 41 - 147
Target Start/End: Original strand, 4703226 - 4703332
Alignment:
Q  41 cagagactaaagtgataacggaagtgcagagtcagagacttatttgtatttaatcctgagtcagggatctatgtgacagcgaggtgcacagtcagggact 140  Q
    |||||||||||||||||||||||||| | ||||| |||||| |||||||||||| |||||| ||||| ||||||||||||||| || | ||||||  |||    
T  4703226 cagagactaaagtgataacggaagtgtacagtcaaagacttctttgtatttaattctgagttagggacctatgtgacagcgagatgtagagtcagtaact 4703325  T
Q  141 aaagtga 147  Q
    |||||||    
T  4703326 aaagtga 4703332  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #10
Raw Score: 55; E-Value: 1e-22
Query Start/End: Original strand, 33 - 147
Target Start/End: Original strand, 48740021 - 48740135
Alignment:
Q  33 tttaacgacagagactaaagtgataacggaagtgcagagtcagagacttatttgtatttaatcctgagtcagggatctatgtgacagcgaggtgcacagt 132  Q
    ||||||| ||| ||||||||||||||| ||||||||||||  | ||||| ||||||||||||  ||||||||||||||| ||||||  |||||||| ||     
T  48740021 tttaacgtcagggactaaagtgataacagaagtgcagagttggggacttctttgtatttaattatgagtcagggatctacgtgacaatgaggtgcagaga 48740120  T
Q  133 cagggactaaagtga 147  Q
    || ||||||||||||    
T  48740121 catggactaaagtga 48740135  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #11
Raw Score: 53; E-Value: 2e-21
Query Start/End: Original strand, 48 - 128
Target Start/End: Complemental strand, 54574532 - 54574452
Alignment:
Q  48 taaagtgataacggaagtgcagagtcagagacttatttgtatttaatcctgagtcagggatctatgtgacagcgaggtgca 128  Q
    ||||||||||||||||||||||||| |   ||||||||||||||||||||||||||| || ||||||||||||||| ||||    
T  54574532 taaagtgataacggaagtgcagagttaagaacttatttgtatttaatcctgagtcagagacctatgtgacagcgagatgca 54574452  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #12
Raw Score: 52; E-Value: 9e-21
Query Start/End: Original strand, 182 - 277
Target Start/End: Complemental strand, 4867866 - 4867772
Alignment:
Q  182 ggaaattattactttttaacttttagaaagttgaattcaacatttttcaccatttttcaagaaattatttctatttatgttcctcttaaccaatgc 277  Q
    ||||||||  ||||||| ||||||| ||| |||||||||||| ||||||||| ||||||| ||||||||| |||||||||| ||||||||||||||    
T  4867866 ggaaattacaactttttgacttttaaaaatttgaattcaacacttttcaccacttttcaacaaattatttttatttatgtt-ctcttaaccaatgc 4867772  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #13
Raw Score: 51; E-Value: 3e-20
Query Start/End: Original strand, 41 - 143
Target Start/End: Original strand, 26685431 - 26685528
Alignment:
Q  41 cagagactaaagtgataacggaagtgcagagtcagagacttatttgtatttaatcctgagtcagggatctatgtgacagcgaggtgcacagtcagggact 140  Q
    |||||||||||||||||||||||||||| |||||  ||||| | |||||||||     ||| ||||| |||||||||||||||||||| |||||||||||    
T  26685431 cagagactaaagtgataacggaagtgcatagtcaaggacttctatgtatttaa-----agtgagggacctatgtgacagcgaggtgcagagtcagggact 26685525  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #14
Raw Score: 50; E-Value: 1e-19
Query Start/End: Original strand, 192 - 277
Target Start/End: Complemental strand, 45674248 - 45674164
Alignment:
Q  192 actttttaacttttagaaagttgaattcaacatttttcaccatttttcaagaaattatttctatttatgttcctcttaaccaatgc 277  Q
    ||||||||||||| |||||||||||||||||| ||||||| ||||||||| |||||| |||||||||| || || |||||||||||    
T  45674248 actttttaactttaagaaagttgaattcaacacttttcactatttttcaacaaattaattctatttat-tttcttttaaccaatgc 45674164  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #15
Raw Score: 47; E-Value: 8e-18
Query Start/End: Original strand, 33 - 95
Target Start/End: Complemental strand, 19050360 - 19050298
Alignment:
Q  33 tttaacgacagagactaaagtgataacggaagtgcagagtcagagacttatttgtatttaatc 95  Q
    ||||||| | ||||||||||||||||||||||||||||||| ||||||| |||||||||||||    
T  19050360 tttaacgtcggagactaaagtgataacggaagtgcagagtccgagacttctttgtatttaatc 19050298  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #16
Raw Score: 47; E-Value: 8e-18
Query Start/End: Original strand, 33 - 147
Target Start/End: Original strand, 39870675 - 39870789
Alignment:
Q  33 tttaacgacagagactaaagtgataacggaagtgcagagtcagagacttatttgtatttaatcctgagtcagggatctatgtgacagcgaggtgcacagt 132  Q
    ||||||| | |||||| |||||||| ||||||||||||||||| || || | ||| ||||||| ||| ||||| |  ||||||||||||||||||| |||    
T  39870675 tttaacgcctgagactgaagtgatatcggaagtgcagagtcagtgatttctctgtgtttaatcttgactcaggaacttatgtgacagcgaggtgcagagt 39870774  T
Q  133 cagggactaaagtga 147  Q
    ||| || ||||||||    
T  39870775 cagagattaaagtga 39870789  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #17
Raw Score: 46; E-Value: 3e-17
Query Start/End: Original strand, 54 - 147
Target Start/End: Original strand, 19051253 - 19051346
Alignment:
Q  54 gataacggaagtgcagagtcagagacttatttgtatttaatcctgagtcagggatctatgtgacagcgaggtgcacagtcagggactaaagtga 147  Q
    ||||||| ||||| |||||||||||||| |||||||||||||  ||||||| || || |||| || ||||||| | ||||||||||||||||||    
T  19051253 gataacgaaagtgtagagtcagagacttctttgtatttaatctcgagtcagtgacctttgtgccaacgaggtgtagagtcagggactaaagtga 19051346  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #18
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 33 - 107
Target Start/End: Complemental strand, 50694871 - 50694797
Alignment:
Q  33 tttaacgacagagactaaagtgataacggaagtgcagagtcagagacttatttgtatttaatcctgagtcaggga 107  Q
    ||||||| ||| |||||||| ||||||||||||||||| ||||| |||||||| ||||||||  |||||||||||    
T  50694871 tttaacgtcagggactaaagagataacggaagtgcagaatcagaaacttatttatatttaattttgagtcaggga 50694797  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #19
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 49 - 103
Target Start/End: Original strand, 54574822 - 54574876
Alignment:
Q  49 aaagtgataacggaagtgcagagtcagagacttatttgtatttaatcctgagtca 103  Q
    ||||||||||| |||||||||||| ||||| ||||||||||||||||||||||||    
T  54574822 aaagtgataacagaagtgcagagttagagatttatttgtatttaatcctgagtca 54574876  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #20
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 77 - 158
Target Start/End: Original strand, 42391933 - 42392016
Alignment:
Q  77 gacttatttgtatttaatcctgagtcagggatctatgtgacagcgaggtgcacagtcagggactaaagtga--atttactcaaa 158  Q
    |||| |||||||||||||| |||||||| || ||||||||||| |||||||  |||||| |||||||||||  |||||||||||    
T  42391933 gactaatttgtatttaatcatgagtcagagacctatgtgacagtgaggtgcggagtcagagactaaagtgatcatttactcaaa 42392016  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #21
Raw Score: 39; E-Value: 0.0000000000005
Query Start/End: Original strand, 45 - 107
Target Start/End: Complemental strand, 21621933 - 21621871
Alignment:
Q  45 gactaaagtgataacggaagtgcagagtcagagacttatttgtatttaatcctgagtcaggga 107  Q
    |||||||||||||||||||||||| | |||  ||||  |||||||||||||||||||||||||    
T  21621933 gactaaagtgataacggaagtgcacattcaatgactattttgtatttaatcctgagtcaggga 21621871  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #22
Raw Score: 39; E-Value: 0.0000000000005
Query Start/End: Original strand, 45 - 143
Target Start/End: Complemental strand, 26170750 - 26170652
Alignment:
Q  45 gactaaagtgataacggaagtgcagagtcagagacttatttgtatttaatcctgagtcagggatctatgtgacagcgaggtgcacagtcagggactaaa 143  Q
    |||||||||||||| ||||||||||||| ||  |||||||||||||||||| | ||||||  |  | ||| ||| ||||||||| |||||| |||||||    
T  26170750 gactaaagtgataatggaagtgcagagtaaggaacttatttgtatttaatcttaagtcagatacttttgtaacaacgaggtgcaaagtcagagactaaa 26170652  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #23
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 45 - 126
Target Start/End: Complemental strand, 4701875 - 4701794
Alignment:
Q  45 gactaaagtgataacggaagtgcagagtcagagacttatttgtatttaatcctgagtcagggatctatgtgacagcgaggtg 126  Q
    ||||||||||||| |||||||||| |||| | ||||| ||||||||||||| | |||||  || || |||||||||||||||    
T  4701875 gactaaagtgatagcggaagtgcatagtcggggacttctttgtatttaatcataagtcatagacctttgtgacagcgaggtg 4701794  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #24
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 192 - 249
Target Start/End: Original strand, 45683989 - 45684046
Alignment:
Q  192 actttttaacttttagaaagttgaattcaacatttttcaccatttttcaagaaattat 249  Q
    ||||||||||||||| ||| |||||||||||| ||||||||| ||||||| |||||||    
T  45683989 actttttaacttttataaatttgaattcaacacttttcaccacttttcaacaaattat 45684046  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #25
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 68 - 143
Target Start/End: Complemental strand, 44158591 - 44158516
Alignment:
Q  68 agagtcagagacttatttgtatttaatcctgagtcagggatctatgtgacagcgaggtgcacagtcagggactaaa 143  Q
    |||||||| ||||| ||||||||||||||||||||||| | || ||| ||| ||||||||| |||| ||| |||||    
T  44158591 agagtcagggacttctttgtatttaatcctgagtcaggaacctctgtaacaacgaggtgcagagtcgggggctaaa 44158516  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #26
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 45 - 139
Target Start/End: Original strand, 21623130 - 21623224
Alignment:
Q  45 gactaaagtgataacggaagtgcagagtcagagacttatttgtatttaatcctgagtcagggatctatgtgacagcgaggtgcacagtcagggac 139  Q
    ||||||||||||||| |||||||| | |||  ||||  ||||||||||||||||| ||||||| |  ||||||| |||| |||| ||||| ||||    
T  21623130 gactaaagtgataacagaagtgcacattcaaggactattttgtatttaatcctgaatcagggaacattgtgacaacgagatgcagagtcaaggac 21623224  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #27
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 208 - 294
Target Start/End: Complemental strand, 29722152 - 29722067
Alignment:
Q  208 aaagttgaattcaacatttttcaccatttttcaagaaattatttctatttatgttcctcttaaccaatgcacaaaggacactcttta 294  Q
    |||||| |||||| ||||||||||||| |||||| | | ||| ||||||| |||||| | |||||||||| | |||| |||||||||    
T  29722152 aaagttaaattcatcatttttcaccatatttcaacacaatatatctatttttgttcc-cctaaccaatgccctaagggcactcttta 29722067  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #28
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 156 - 230
Target Start/End: Original strand, 35911151 - 35911224
Alignment:
Q  156 aaactaaaagtaataattttgcacccggaaattattactttttaacttttagaaagttgaattcaacatttttca 230  Q
    |||||||||||| ||||||||||   | ||||||| ||||||| ||||||| ||| |||||||||||| ||||||    
T  35911151 aaactaaaagtagtaattttgcatt-gaaaattataactttttgacttttaaaaatttgaattcaacacttttca 35911224  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #29
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 46 - 103
Target Start/End: Complemental strand, 2786330 - 2786273
Alignment:
Q  46 actaaagtgataacggaagtgcagagtcagagacttatttgtatttaatcctgagtca 103  Q
    |||||| |||||||||||||||| | |||  || | ||||||||||||||||||||||    
T  2786330 actaaaatgataacggaagtgcacattcaaggagtaatttgtatttaatcctgagtca 2786273  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #30
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 34 - 95
Target Start/End: Original strand, 25810415 - 25810476
Alignment:
Q  34 ttaacgacagagactaaagtgataacggaagtgcagagtcagagacttatttgtatttaatc 95  Q
    |||||| ||||||||||||||||| |||||||||| | ||| || ||  |||||||||||||    
T  25810415 ttaacgtcagagactaaagtgatagcggaagtgcacattcataggctactttgtatttaatc 25810476  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #31
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 194 - 275
Target Start/End: Complemental strand, 45257688 - 45257608
Alignment:
Q  194 tttttaacttttagaaagttgaattcaacatttttcaccatttttcaagaaattatttctatttatgttcctcttaaccaat 275  Q
    |||||| |||||| ||||||||||||| || |||||| || ||  ||| ||| ||||||||||| |||| ||||||||||||    
T  45257688 tttttagcttttaaaaagttgaattcaccacttttcaacacttcccaacaaaatatttctatttttgtt-ctcttaaccaat 45257608  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #32
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 45 - 105
Target Start/End: Complemental strand, 6039231 - 6039171
Alignment:
Q  45 gactaaagtgataacggaagtgcagagtcagagacttatttgtatttaatcctgagtcagg 105  Q
    ||||||| ||||| | |||||||| || ||||||||||||| ||||||||  |||||||||    
T  6039231 gactaaaatgataccagaagtgcatagccagagacttatttatatttaattttgagtcagg 6039171  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0034 (Bit Score: 71; Significance: 4e-32; HSPs: 1)
Name: scaffold0034
Description:

Target: scaffold0034; HSP #1
Raw Score: 71; E-Value: 4e-32
Query Start/End: Original strand, 45 - 147
Target Start/End: Complemental strand, 116165 - 116063
Alignment:
Q  45 gactaaagtgataacggaagtgcagagtcagagacttatttgtatttaatcctgagtcagggatctatgtgacagcgaggtgcacagtcagggactaaag 144  Q
    |||||||||||||||||||||||| |||||| ||||||||||||||||||||||||||||||| ||||||||||||||| |||| | | ||| |||||||    
T  116165 gactaaagtgataacggaagtgcatagtcagggacttatttgtatttaatcctgagtcagggacctatgtgacagcgagctgcagaatgaggaactaaag 116066  T
Q  145 tga 147  Q
    |||    
T  116065 tga 116063  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0045 (Bit Score: 62; Significance: 9e-27; HSPs: 2)
Name: scaffold0045
Description:

Target: scaffold0045; HSP #1
Raw Score: 62; E-Value: 9e-27
Query Start/End: Original strand, 194 - 275
Target Start/End: Complemental strand, 62663 - 62583
Alignment:
Q  194 tttttaacttttagaaagttgaattcaacatttttcaccatttttcaagaaattatttctatttatgttcctcttaaccaat 275  Q
    |||||||||||||||||||||||||||||| ||||||||||||||||| ||||||||||||||||||||  |||||||||||    
T  62663 tttttaacttttagaaagttgaattcaacacttttcaccatttttcaaaaaattatttctatttatgtt-atcttaaccaat 62583  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0045; HSP #2
Raw Score: 62; E-Value: 9e-27
Query Start/End: Original strand, 194 - 275
Target Start/End: Complemental strand, 69995 - 69915
Alignment:
Q  194 tttttaacttttagaaagttgaattcaacatttttcaccatttttcaagaaattatttctatttatgttcctcttaaccaat 275  Q
    |||||||||||||||||||||||||||||| ||||||||||||||||| ||||||||||||||||||||  |||||||||||    
T  69995 tttttaacttttagaaagttgaattcaacacttttcaccatttttcaaaaaattatttctatttatgtt-atcttaaccaat 69915  T

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Target: scaffold0767 (Bit Score: 59; Significance: 6e-25; HSPs: 2)
Name: scaffold0767
Description:

Target: scaffold0767; HSP #1
Raw Score: 59; E-Value: 6e-25
Query Start/End: Original strand, 33 - 147
Target Start/End: Complemental strand, 5721 - 5607
Alignment:
Q  33 tttaacgacagagactaaagtgataacggaagtgcagagtcagagacttatttgtatttaatcctgagtcagggatctatgtgacagcgaggtgcacagt 132  Q
    ||||||| |||||||||||||||||||||||||| |||||||| ||||| |||||||||||| ||||||||| ||  | ||| ||| ||||||||| |||    
T  5721 tttaacgccagagactaaagtgataacggaagtgtagagtcagggacttctttgtatttaattctgagtcagagacatttgtcacaacgaggtgcaaagt 5622  T
Q  133 cagggactaaagtga 147  Q
     || |||||||||||    
T  5621 gagtgactaaagtga 5607  T

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Target: scaffold0767; HSP #2
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 46 - 143
Target Start/End: Original strand, 6264 - 6361
Alignment:
Q  46 actaaagtgataacggaagtgcagagtcagagacttatttgtatttaatcctgagtcagggatctatgtgacagcgaggtgcacagtcagggactaaa 143  Q
    |||||||||||||||||||| ||| ||||  || || ||| |||||||| |||| ||| ||| || | ||| ||||| ||||| ||||| ||||||||    
T  6264 actaaagtgataacggaagtacagtgtcatcgatttctttatatttaattctgaatcatggacctctatgatagcgaagtgcagagtcaaggactaaa 6361  T

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Target: scaffold0039 (Bit Score: 55; Significance: 1e-22; HSPs: 3)
Name: scaffold0039
Description:

Target: scaffold0039; HSP #1
Raw Score: 55; E-Value: 1e-22
Query Start/End: Original strand, 33 - 143
Target Start/End: Complemental strand, 79195 - 79085
Alignment:
Q  33 tttaacgacagagactaaagtgataacggaagtgcagagtcagagacttatttgtatttaatcctgagtcagggatctatgtgacagcgaggtgcacagt 132  Q
    ||||||| || |||||||||||||| |||| ||||| |||||  ||||| ||| ||||||||| ||||||| ||| |||||||||||||||||||| |||    
T  79195 tttaacgtcaaagactaaagtgatatcggaggtgcaaagtcaaggacttctttttatttaatcatgagtcaaggacctatgtgacagcgaggtgcagagt 79096  T
Q  133 cagggactaaa 143  Q
    |||| ||||||    
T  79095 caggaactaaa 79085  T

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Target: scaffold0039; HSP #2
Raw Score: 47; E-Value: 8e-18
Query Start/End: Original strand, 33 - 147
Target Start/End: Original strand, 79684 - 79798
Alignment:
Q  33 tttaacgacagagactaaagtgataacggaagtgcagagtcagagacttatttgtatttaatcctgagtcagggatctatgtgacagcgaggtgcacagt 132  Q
    ||||||| || |||||||| ||||||  ||| |||||||||| |||||| ||||||||||||| ||||||||| |  ||||| ||| ||||||||  |||    
T  79684 tttaacgtcaaagactaaaatgataatagaaatgcagagtcaaagacttctttgtatttaatcatgagtcaggaacttatgtaacaacgaggtgccgagt 79783  T
Q  133 cagggactaaagtga 147  Q
    |||||| ||||||||    
T  79784 cagggattaaagtga 79798  T

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Target: scaffold0039; HSP #3
Raw Score: 42; E-Value: 0.000000000000008
Query Start/End: Original strand, 50 - 143
Target Start/End: Original strand, 74331 - 74424
Alignment:
Q  50 aagtgataacggaagtgcagagtcagagacttatttgtatttaatcctgagtcagggatctatgtgacagcgaggtgcacagtcagggactaaa 143  Q
    |||||||| | || ||| |||||||  ||||| ||||||||||||| ||||| ||||| ||||||||||| ||| |||| ||||||||||||||    
T  74331 aagtgatatcagaggtgtagagtcaaggacttctttgtatttaatcatgagttagggacctatgtgacagtgagttgcagagtcagggactaaa 74424  T

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Target: scaffold0169 (Bit Score: 53; Significance: 2e-21; HSPs: 1)
Name: scaffold0169
Description:

Target: scaffold0169; HSP #1
Raw Score: 53; E-Value: 2e-21
Query Start/End: Original strand, 194 - 262
Target Start/End: Complemental strand, 9093 - 9025
Alignment:
Q  194 tttttaacttttagaaagttgaattcaacatttttcaccatttttcaagaaattatttctatttatgtt 262  Q
    ||||| ||||||| |||||||||||||||| ||||||||||||||||| ||||||||||||||||||||    
T  9093 tttttgacttttaaaaagttgaattcaacacttttcaccatttttcaacaaattatttctatttatgtt 9025  T

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Target: scaffold0209 (Bit Score: 47; Significance: 8e-18; HSPs: 1)
Name: scaffold0209
Description:

Target: scaffold0209; HSP #1
Raw Score: 47; E-Value: 8e-18
Query Start/End: Original strand, 200 - 294
Target Start/End: Original strand, 29349 - 29441
Alignment:
Q  200 acttttagaaagttgaattcaacatttttcaccatttttcaagaaattatttctatttatgttcctcttaaccaatgcacaaaggacactcttta 294  Q
    ||||||||||||||||||| ||||||| ||||||||||| || ||||||||| |||||||||| |||||||| ||||  | ||||||||||||||    
T  29349 acttttagaaagttgaatt-aacatttctcaccattttttaacaaattatttttatttatgtt-ctcttaacgaatgttccaaggacactcttta 29441  T

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Target: scaffold0369 (Bit Score: 33; Significance: 0.000000002; HSPs: 1)
Name: scaffold0369
Description:

Target: scaffold0369; HSP #1
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 33 - 97
Target Start/End: Original strand, 9137 - 9201
Alignment:
Q  33 tttaacgacagagactaaagtgataacggaagtgcagagtcagagacttatttgtatttaatcct 97  Q
    ||||||| ||||||||||| |||||||  ||||||| | |||||||||  |||||||||||||||    
T  9137 tttaacgtcagagactaaactgataacaaaagtgcaaattcagagactattttgtatttaatcct 9201  T

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Target: scaffold0016 (Bit Score: 31; Significance: 0.00000003; HSPs: 1)
Name: scaffold0016
Description:

Target: scaffold0016; HSP #1
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 83 - 158
Target Start/End: Original strand, 36574 - 36650
Alignment:
Q  83 tttgtatttaatcctgagtcagggatctatgtgacagcgaggtgcacagtcagggactaaagtg--aatttactcaaa 158  Q
    |||||||||||||| |||| || || || ||||||| |||||||||  ||||||||||||||||  ||||||||||||    
T  36574 tttgtatttaatcccgagttagagacctttgtgaca-cgaggtgcagggtcagggactaaagtgacaatttactcaaa 36650  T

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