View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
|
Alignment Overview
Query: NF14618_low_8 (Length: 343)
Name: NF14618_low_8
Description: NF14618
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF14618_low_8 |
 | |
|
| [»] scaffold0640 (1 HSPs) |
| | |
|
| [»] scaffold0271 (1 HSPs) |
| | |
|
| [»] scaffold0274 (2 HSPs) |
| | |
|
| [»] scaffold0648 (1 HSPs) |
| | |
|
Alignment Details
Target: scaffold0640 (Bit Score: 302; Significance: 1e-170; HSPs: 1)
Name: scaffold0640
Description:
Target: scaffold0640; HSP #1
Raw Score: 302; E-Value: 1e-170
Query Start/End: Original strand, 12 - 325
Target Start/End: Complemental strand, 7091 - 6778
Alignment:
| Q |
12 |
gatgaagcacataatagtattgaacttaagagtatttcacgcaccatgtaagttaactaacacatttgatctcaaaacaatgcaactcatttagattctg |
111 |
Q |
| |
|
|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||| |
|
|
| T |
7091 |
gatgaagcacataatagtattgaacttaagagtatttcacgcaccatgtaagttaactaacacatttgatctcaaaacaacgcaactcatttagattctg |
6992 |
T |
|
| Q |
112 |
gtttaacttttaaagtaggtcacccactccataatctgtcaaagttgtttaactttacaatcgaagtaacatagagcttgtcacccactctatcaataaa |
211 |
Q |
| |
|
|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
|
|
| T |
6991 |
gtttaacttttaaagtaggtcacccactccataatctgtcaaagttgtttaactttacaatcgaagtaacatagagcttgtcacccactctatcaataaa |
6892 |
T |
|
| Q |
212 |
ccgatagtatgcatgcctccattttgtaatgagaaacaaagaaccgaaaatccctcagaaaccaactgcaaatccaacccccatgccaagatacaatgac |
311 |
Q |
| |
|
|||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||| |||||||||||||||||||||| |
|
|
| T |
6891 |
ccgatagtatgcatgcctccattttgtaatgagaaacaaagaaccgaaaatcccccagaaaccaactgcaaatccaatccccatgccaagatacaatgac |
6792 |
T |
|
| Q |
312 |
tcttttgcagagtc |
325 |
Q |
| |
|
|||||||||||||| |
|
|
| T |
6791 |
tcttttgcagagtc |
6778 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: scaffold0271 (Bit Score: 298; Significance: 1e-167; HSPs: 1)
Name: scaffold0271
Description:
Target: scaffold0271; HSP #1
Raw Score: 298; E-Value: 1e-167
Query Start/End: Original strand, 12 - 325
Target Start/End: Complemental strand, 12189 - 11876
Alignment:
| Q |
12 |
gatgaagcacataatagtattgaacttaagagtatttcacgcaccatgtaagttaactaacacatttgatctcaaaacaatgcaactcatttagattctg |
111 |
Q |
| |
|
|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||| |
|
|
| T |
12189 |
gatgaagcacataatagtattgaacttaagagtatttcacgcaccatgtaagttaactaacacatttgatctcaaaacaacgcaactcatttagattctg |
12090 |
T |
|
| Q |
112 |
gtttaacttttaaagtaggtcacccactccataatctgtcaaagttgtttaactttacaatcgaagtaacatagagcttgtcacccactctatcaataaa |
211 |
Q |
| |
|
|||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
|
|
| T |
12089 |
gtttaacttttatagtaggtcacccactccataatctgtcaaagttgtttaactttacaatcgaagtaacatagagcttgtcacccactctatcaataaa |
11990 |
T |
|
| Q |
212 |
ccgatagtatgcatgcctccattttgtaatgagaaacaaagaaccgaaaatccctcagaaaccaactgcaaatccaacccccatgccaagatacaatgac |
311 |
Q |
| |
|
|||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||| |||||||||||||||||||||| |
|
|
| T |
11989 |
ccgatagtatgcatgcctccattttgtaatgagaaacaaagaaccgaaaatcccccagaaaccaactgcaaatccaatccccatgccaagatacaatgac |
11890 |
T |
|
| Q |
312 |
tcttttgcagagtc |
325 |
Q |
| |
|
|||||||||||||| |
|
|
| T |
11889 |
tcttttgcagagtc |
11876 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: scaffold0274 (Bit Score: 294; Significance: 1e-165; HSPs: 2)
Name: scaffold0274
Description:
Target: scaffold0274; HSP #1
Raw Score: 294; E-Value: 1e-165
Query Start/End: Original strand, 12 - 325
Target Start/End: Original strand, 1883 - 2195
Alignment:
| Q |
12 |
gatgaagcacataatagtattgaacttaagagtatttcacgcaccatgtaagttaactaacacatttgatctcaaaacaatgcaactcatttagattctg |
111 |
Q |
| |
|
|||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||| |
|
|
| T |
1883 |
gatgaagcacataatagtattgaactta-gagtatttcacgcaccatgtaagttaactaacacatttgatctcaaaacaacgcaactcatttagattctg |
1981 |
T |
|
| Q |
112 |
gtttaacttttaaagtaggtcacccactccataatctgtcaaagttgtttaactttacaatcgaagtaacatagagcttgtcacccactctatcaataaa |
211 |
Q |
| |
|
|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
|
|
| T |
1982 |
gtttaacttttaaagtaggtcacccactccataatctgtcaaagttgtttaactttacaatcgaagtaacatagagcttgtcacccactctatcaataaa |
2081 |
T |
|
| Q |
212 |
ccgatagtatgcatgcctccattttgtaatgagaaacaaagaaccgaaaatccctcagaaaccaactgcaaatccaacccccatgccaagatacaatgac |
311 |
Q |
| |
|
|||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||| |||||||||||||||||||||| |
|
|
| T |
2082 |
ccgatagtatgcatgcctccattttgtaatgagaaacaaagaaccgaaaatcccccagaaaccaactgcaaatccaatccccatgccaagatacaatgac |
2181 |
T |
|
| Q |
312 |
tcttttgcagagtc |
325 |
Q |
| |
|
|||||||||||||| |
|
|
| T |
2182 |
tcttttgcagagtc |
2195 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: scaffold0274; HSP #2
Raw Score: 286; E-Value: 1e-160
Query Start/End: Original strand, 12 - 325
Target Start/End: Complemental strand, 22273 - 21961
Alignment:
| Q |
12 |
gatgaagcacataatagtattgaacttaagagtatttcacgcaccatgtaagttaactaacacatttgatctcaaaacaatgcaactcatttagattctg |
111 |
Q |
| |
|
|||||||||||||||| ||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||| |
|
|
| T |
22273 |
gatgaagcacataataatattgaactta-gagtatttcacgcaccatgtaagttaactaacacatttgatctcaaaacaacgcaactcatttagattctg |
22175 |
T |
|
| Q |
112 |
gtttaacttttaaagtaggtcacccactccataatctgtcaaagttgtttaactttacaatcgaagtaacatagagcttgtcacccactctatcaataaa |
211 |
Q |
| |
|
|||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
|
|
| T |
22174 |
gtttaacttttatagtaggtcacccactccataatctgtcaaagttgtttaactttacaatcgaagtaacatagagcttgtcacccactctatcaataaa |
22075 |
T |
|
| Q |
212 |
ccgatagtatgcatgcctccattttgtaatgagaaacaaagaaccgaaaatccctcagaaaccaactgcaaatccaacccccatgccaagatacaatgac |
311 |
Q |
| |
|
||||||||||||||||||||||||||||||||||||||||||||| |||||||| ||||||||||||||||||||||||||||||||||||||||||||| |
|
|
| T |
22074 |
ccgatagtatgcatgcctccattttgtaatgagaaacaaagaaccaaaaatcccccagaaaccaactgcaaatccaacccccatgccaagatacaatgac |
21975 |
T |
|
| Q |
312 |
tcttttgcagagtc |
325 |
Q |
| |
|
|||||||||||||| |
|
|
| T |
21974 |
tcttttgcagagtc |
21961 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: scaffold0648 (Bit Score: 291; Significance: 1e-163; HSPs: 1)
Name: scaffold0648
Description:
Target: scaffold0648; HSP #1
Raw Score: 291; E-Value: 1e-163
Query Start/End: Original strand, 12 - 325
Target Start/End: Original strand, 2411 - 2725
Alignment:
| Q |
12 |
gatgaagcacataatagtattgaacttaagagtatttcacgcaccatgtaagttaactaacacatttgatctcaaaacaatgcaactcatttagattctg |
111 |
Q |
| |
|
|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||| |
|
|
| T |
2411 |
gatgaagcacataatagtattgaacttaagagtatttcacgcaccatgtaagttaactaacacatttgatctcaaaacaacgcaactcatttagattctg |
2510 |
T |
|
| Q |
112 |
gtttaacttttaaagtaggtcacccactccataatctgtcaaagttgtttaactttacaatcgaagtaacatagagcttgtcacccactctatcaataaa |
211 |
Q |
| |
|
|||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
|
|
| T |
2511 |
gtttaacttttatagtaggtcacccactccataatctgtcaaagttgtttaactttacaatcgaagtaacatagagcttgtcacccactctatcaataaa |
2610 |
T |
|
| Q |
212 |
ccgatagtatgcatgcctccattttgtaatgagaaacaaagaaccgaaaat-ccctcagaaaccaactgcaaatccaacccccatgccaagatacaatga |
310 |
Q |
| |
|
||||||||||||||||||||||||||||||||||||||||||||| ||||| ||| |||||||||||||||||||||||||||||||||||||||||||| |
|
|
| T |
2611 |
ccgatagtatgcatgcctccattttgtaatgagaaacaaagaaccaaaaatacccccagaaaccaactgcaaatccaacccccatgccaagatacaatga |
2710 |
T |
|
| Q |
311 |
ctcttttgcagagtc |
325 |
Q |
| |
|
||||||||||||||| |
|
|
| T |
2711 |
ctcttttgcagagtc |
2725 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr3 (Bit Score: 99; Significance: 8e-49; HSPs: 28)
Name: chr3
Description:
Target: chr3; HSP #1
Raw Score: 99; E-Value: 8e-49
Query Start/End: Original strand, 158 - 316
Target Start/End: Complemental strand, 19355257 - 19355099
Alignment:
| Q |
158 |
gtttaactttacaatcgaagtaacatagagcttgtcacccactctatcaataaaccgatagtatgcatgcctccattttgtaatgagaaacaaagaaccg |
257 |
Q |
| |
|
|||||||||||| ||| |||||||||||| |||||||| ||||||||||| ||||||| |||||||||||||||||||| |||| ||||||||||||| | |
|
|
| T |
19355257 |
gtttaactttacgatcaaagtaacatagatcttgtcacgcactctatcaacaaaccgaaagtatgcatgcctccattttctaattagaaacaaagaacgg |
19355158 |
T |
|
| Q |
258 |
aaaatccctcagaaaccaactgcaaatccaacccccatgccaagatacaatgactcttt |
316 |
Q |
| |
|
||||||| |||||||| |||||||||||||| |||||||| ||||||||||| ||||| |
|
|
| T |
19355157 |
caaatcccccagaaacctactgcaaatccaactcccatgcctagatacaatgattcttt |
19355099 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr3; HSP #2
Raw Score: 94; E-Value: 8e-46
Query Start/End: Original strand, 159 - 316
Target Start/End: Original strand, 17725996 - 17726153
Alignment:
| Q |
159 |
tttaactttacaatcgaagtaacatagagcttgtcacccactctatcaataaaccgatagtatgcatgcctccattttgtaatgagaaacaaagaaccga |
258 |
Q |
| |
|
|||||||||||||| |||||||||||||||||||||| |||| ||||||||||| | |||||||||||||||||||| |||| |||||||||||||| |
|
|
| T |
17725996 |
tttaactttacaattaaagtaacatagagcttgtcacctactccatcaataaaccaaaagtatgcatgcctccattttctaataagaaacaaagaaccac |
17726095 |
T |
|
| Q |
259 |
aaatccctcagaaaccaactgcaaatccaacccccatgccaagatacaatgactcttt |
316 |
Q |
| |
|
||||||| |||||||| |||||||||||||| ||||| || ||||||||||| ||||| |
|
|
| T |
17726096 |
aaatcccccagaaacctactgcaaatccaactcccatccctagatacaatgattcttt |
17726153 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr3; HSP #3
Raw Score: 94; E-Value: 8e-46
Query Start/End: Original strand, 159 - 316
Target Start/End: Original strand, 19027225 - 19027382
Alignment:
| Q |
159 |
tttaactttacaatcgaagtaacatagagcttgtcacccactctatcaataaaccgatagtatgcatgcctccattttgtaatgagaaacaaagaaccga |
258 |
Q |
| |
|
|||||||||||||| |||||||||||||||||||||| |||| ||||||||||| | |||||||||||||||||||| |||| |||||||||||||| |
|
|
| T |
19027225 |
tttaactttacaattaaagtaacatagagcttgtcacctactccatcaataaaccaaaagtatgcatgcctccattttctaataagaaacaaagaaccac |
19027324 |
T |
|
| Q |
259 |
aaatccctcagaaaccaactgcaaatccaacccccatgccaagatacaatgactcttt |
316 |
Q |
| |
|
||||||| |||||||| |||||||||||||| ||||| || ||||||||||| ||||| |
|
|
| T |
19027325 |
aaatcccccagaaacctactgcaaatccaactcccatccctagatacaatgattcttt |
19027382 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr3; HSP #4
Raw Score: 94; E-Value: 8e-46
Query Start/End: Original strand, 157 - 310
Target Start/End: Complemental strand, 19377162 - 19377009
Alignment:
| Q |
157 |
tgtttaactttacaatcgaagtaacatagagcttgtcacccactctatcaataaaccgatagtatgcatgcctccattttgtaatgagaaacaaagaacc |
256 |
Q |
| |
|
||||||||||||| ||| ||||||||||||| |||||||| ||||||| ||||||| || ||||||||||||||||||| |||| |||||||||||||| |
|
|
| T |
19377162 |
tgtttaactttacgatcaaagtaacatagagtttgtcacctactctattaataaactgaaagtatgcatgcctccatttcctaataagaaacaaagaacc |
19377063 |
T |
|
| Q |
257 |
gaaaatccctcagaaaccaactgcaaatccaacccccatgccaagatacaatga |
310 |
Q |
| |
|
| ||||||| |||||||| |||||||||||||| |||||||| ||||||||||| |
|
|
| T |
19377062 |
gcaaatcccccagaaacctactgcaaatccaactcccatgcctagatacaatga |
19377009 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr3; HSP #5
Raw Score: 92; E-Value: 1e-44
Query Start/End: Original strand, 151 - 306
Target Start/End: Original strand, 14894841 - 14894996
Alignment:
| Q |
151 |
caaagttgtttaactttacaatcgaagtaacatagagcttgtcacccactctatcaataaaccgatagtatgcatgcctccattttgtaatgagaaacaa |
250 |
Q |
| |
|
||||||||||||||||| ||| |||||||||||||||||||||| |||| ||||||||||||| |||||||||||||||||||| |||| |||||||| |
|
|
| T |
14894841 |
caaagttgtttaactttgggatcaaagtaacatagagcttgtcacctactccatcaataaaccgaaagtatgcatgcctccattttctaataagaaacaa |
14894940 |
T |
|
| Q |
251 |
agaaccgaaaatccctcagaaaccaactgcaaatccaacccccatgccaagataca |
306 |
Q |
| |
|
|||||| ||||||| || ||||| ||||||||||||| |||||||||||||||| |
|
|
| T |
14894941 |
agaaccagaaatcccccaaaaacctactgcaaatccaattcccatgccaagataca |
14894996 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr3; HSP #6
Raw Score: 89; E-Value: 7e-43
Query Start/End: Original strand, 159 - 307
Target Start/End: Complemental strand, 18166697 - 18166549
Alignment:
| Q |
159 |
tttaactttacaatcgaagtaacatagagcttgtcacccactctatcaataaaccgatagtatgcatgcctccattttgtaatgagaaacaaagaaccga |
258 |
Q |
| |
|
||||||||||| || |||||||||||||||||||||| |||||||||||||||||| |||||||||| ||||||||| |||| |||||||||||||| |
|
|
| T |
18166697 |
tttaactttacgttcaaagtaacatagagcttgtcaccaactctatcaataaaccgaaagtatgcatgtctccattttctaataagaaacaaagaaccac |
18166598 |
T |
|
| Q |
259 |
aaatccctcagaaaccaactgcaaatccaacccccatgccaagatacaa |
307 |
Q |
| |
|
||||||| |||||||| |||||||||||||| |||||||| || ||||| |
|
|
| T |
18166597 |
aaatcccccagaaacctactgcaaatccaactcccatgcctaggtacaa |
18166549 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr3; HSP #7
Raw Score: 87; E-Value: 1e-41
Query Start/End: Original strand, 159 - 317
Target Start/End: Complemental strand, 17943495 - 17943337
Alignment:
| Q |
159 |
tttaactttacaatcgaagtaacatagagcttgtcacccactctatcaataaaccgatagtatgcatgcctccattttgtaatgagaaacaaagaaccga |
258 |
Q |
| |
|
||||||||||| ||| ||||||||||||| ||||| ||||||||||||||||||||| || ||||||||||||||||| |||| | |||||||||||| |
|
|
| T |
17943495 |
tttaactttacgatcaaagtaacatagagtttgtcgcccactctatcaataaaccgaaagcatgcatgcctccattttctaataaaaaacaaagaaccac |
17943396 |
T |
|
| Q |
259 |
aaatccctcagaaaccaactgcaaatccaacccccatgccaagatacaatgactctttt |
317 |
Q |
| |
|
||||||| || ||||| ||||||||||||||||||||||||| |||| ||| |||||| |
|
|
| T |
17943395 |
aaatcccccaaaaacctgctgcaaatccaacccccatgccaaggtacagtgattctttt |
17943337 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr3; HSP #8
Raw Score: 83; E-Value: 3e-39
Query Start/End: Original strand, 158 - 316
Target Start/End: Complemental strand, 19426232 - 19426074
Alignment:
| Q |
158 |
gtttaactttacaatcgaagtaacatagagcttgtcacccactctatcaataaaccgatagtatgcatgcctccattttgtaatgagaaacaaagaaccg |
257 |
Q |
| |
|
|||||||||||| ||| |||||||||||| ||| |||| ||||||||||| ||||||| ||||||||||| |||||||| |||| || ||||||||||| |
|
|
| T |
19426232 |
gtttaactttacgatcaaagtaacatagatcttatcacgcactctatcaacaaaccgaaagtatgcatgcttccattttctaataaggaacaaagaacca |
19426133 |
T |
|
| Q |
258 |
aaaatccctcagaaaccaactgcaaatccaacccccatgccaagatacaatgactcttt |
316 |
Q |
| |
|
||||||| |||||||| |||||||||||||| ||||| || ||||||||||| ||||| |
|
|
| T |
19426132 |
caaatcccccagaaacctactgcaaatccaactcccatccctagatacaatgattcttt |
19426074 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr3; HSP #9
Raw Score: 82; E-Value: 1e-38
Query Start/End: Original strand, 152 - 317
Target Start/End: Complemental strand, 25464601 - 25464436
Alignment:
| Q |
152 |
aaagttgtttaactttacaatcgaagtaacatagagcttgtcacccactctatcaataaaccgatagtatgcatgcctccattttgtaatgagaaacaaa |
251 |
Q |
| |
|
||||| |||||||||||| ||| ||||||||||||| ||||||| ||||| || |||||||||| ||||||||||||||||||| |||| | ||||||| |
|
|
| T |
25464601 |
aaagtggtttaactttacgatcaaagtaacatagagtttgtcactcactccattaataaaccgaaagtatgcatgcctccatttcctaataaaaaacaaa |
25464502 |
T |
|
| Q |
252 |
gaaccgaaaatccctcagaaaccaactgcaaatccaacccccatgccaagatacaatgactctttt |
317 |
Q |
| |
|
||||| ||||||| |||||||| | |||||||||||| |||| ||| ||||||||||| |||||| |
|
|
| T |
25464501 |
gaaccacaaatcccccagaaacctattgcaaatccaactcccaagcctagatacaatgattctttt |
25464436 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr3; HSP #10
Raw Score: 80; E-Value: 2e-37
Query Start/End: Original strand, 159 - 314
Target Start/End: Complemental strand, 18117497 - 18117342
Alignment:
| Q |
159 |
tttaactttacaatcgaagtaacatagagcttgtcacccactctatcaataaaccgatagtatgcatgcctccattttgtaatgagaaacaaagaaccga |
258 |
Q |
| |
|
||||||||||| ||| ||||||||||||| | ||||||||||||||||| |||||| |||| |||||||||||||| |||| ||||||| |||||| |
|
|
| T |
18117497 |
tttaactttacgatcaaagtaacatagagatagtcacccactctatcaactaaccgaaagtacgcatgcctccatttcctaataagaaacatagaaccac |
18117398 |
T |
|
| Q |
259 |
aaatccctcagaaaccaactgcaaatccaacccccatgccaagatacaatgactct |
314 |
Q |
| |
|
||||||| |||||||| ||||||||||| || |||||||| ||||||||||||||| |
|
|
| T |
18117397 |
aaatcccccagaaacctactgcaaatcccactcccatgcctagatacaatgactct |
18117342 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr3; HSP #11
Raw Score: 80; E-Value: 2e-37
Query Start/End: Original strand, 159 - 306
Target Start/End: Original strand, 18872337 - 18872484
Alignment:
| Q |
159 |
tttaactttacaatcgaagtaacatagagcttgtcacccactctatcaataaaccgatagtatgcatgcctccattttgtaatgagaaacaaagaaccga |
258 |
Q |
| |
|
|||||||||| ||| |||||||||||||||||||||| |||| || ||||||| | ||||||||||||||||||| |||| |||||||||||||| |
|
|
| T |
18872337 |
tttaactttatcatcaaagtaacatagagcttgtcacctactccatatataaaccaaaagtatgcatgcctccatttcctaataagaaacaaagaaccac |
18872436 |
T |
|
| Q |
259 |
aaatccctcagaaaccaactgcaaatccaacccccatgccaagataca |
306 |
Q |
| |
|
||||||| |||||||| |||||||||||||| |||||||||||||||| |
|
|
| T |
18872437 |
aaatcccccagaaacctactgcaaatccaactcccatgccaagataca |
18872484 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr3; HSP #12
Raw Score: 78; E-Value: 3e-36
Query Start/End: Original strand, 157 - 310
Target Start/End: Complemental strand, 19335555 - 19335402
Alignment:
| Q |
157 |
tgtttaactttacaatcgaagtaacatagagcttgtcacccactctatcaataaaccgatagtatgcatgcctccattttgtaatgagaaacaaagaacc |
256 |
Q |
| |
|
|||| |||||||| ||| |||||||||||| ||||||||||||||||| || ||||||| |||| ||||||||||||||| |||| |||||||||||||| |
|
|
| T |
19335555 |
tgttcaactttacgatcaaagtaacatagatcttgtcacccactctataaacaaaccgaaagtaagcatgcctccattttctaataagaaacaaagaacc |
19335456 |
T |
|
| Q |
257 |
gaaaatccctcagaaaccaactgcaaatccaacccccatgccaagatacaatga |
310 |
Q |
| |
|
||||||| |||||||| ||||||||||||| | ||| || ||||||||||| |
|
|
| T |
19335455 |
acaaatcccccagaaacctgctgcaaatccaactctcatccctagatacaatga |
19335402 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr3; HSP #13
Raw Score: 75; E-Value: 2e-34
Query Start/End: Original strand, 159 - 317
Target Start/End: Complemental strand, 19401267 - 19401109
Alignment:
| Q |
159 |
tttaactttacaatcgaagtaacatagagcttgtcacccactctatcaataaaccgatagtatgcatgcctccattttgtaatgagaaacaaagaaccga |
258 |
Q |
| |
|
||||||||||| ||| |||| ||||||||| ||| |||||||| || || |||||| | |||||||||||||||||| ||||||||||||||||||| |
|
|
| T |
19401267 |
tttaactttaccatcaaagttacatagagcctgttacccactccatatatgaaccgaaaatatgcatgcctccattttctaatgagaaacaaagaaccac |
19401168 |
T |
|
| Q |
259 |
aaatccctcagaaaccaactgcaaatccaacccccatgccaagatacaatgactctttt |
317 |
Q |
| |
|
||||||| |||||||| ||||||||||| || ||||||||||| ||||| || |||||| |
|
|
| T |
19401167 |
aaatcccccagaaacctactgcaaatcccactcccatgccaaggtacaacgattctttt |
19401109 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr3; HSP #14
Raw Score: 72; E-Value: 1e-32
Query Start/End: Original strand, 159 - 314
Target Start/End: Complemental strand, 18105037 - 18104882
Alignment:
| Q |
159 |
tttaactttacaatcgaagtaacatagagcttgtcacccactctatcaataaaccgatagtatgcatgcctccattttgtaatgagaaacaaagaaccga |
258 |
Q |
| |
|
||||||||||| ||| ||||||||||||| | |||||||||||||| || |||||| ||||||||||||||||||| |||| ||||||| |||||||| |
|
|
| T |
18105037 |
tttaactttacgatcaaagtaacatagagatagtcacccactctattaactaaccgaaagtatgcatgcctccatttcctaataagaaacatagaaccga |
18104938 |
T |
|
| Q |
259 |
aaatccctcagaaaccaactgcaaatccaacccccatgccaagatacaatgactct |
314 |
Q |
| |
|
||||||| |||| || ||||||||||| || |||||||| | |||||| |||||| |
|
|
| T |
18104937 |
aaatccccaagaatcctactgcaaatcccactcccatgcctaaatacaacgactct |
18104882 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr3; HSP #15
Raw Score: 72; E-Value: 1e-32
Query Start/End: Original strand, 159 - 314
Target Start/End: Complemental strand, 18148359 - 18148204
Alignment:
| Q |
159 |
tttaactttacaatcgaagtaacatagagcttgtcacccactctatcaataaaccgatagtatgcatgcctccattttgtaatgagaaacaaagaaccga |
258 |
Q |
| |
|
||||||||||| ||| |||||||||||| | ||||||||||||||||| |||||| |||| |||||||||||||| |||| |||||||||||||| |
|
|
| T |
18148359 |
tttaactttacgatcacagtaacatagagatagtcacccactctatcaactaaccgaaagtacgcatgcctccatttcctaataagaaacaaagaaccac |
18148260 |
T |
|
| Q |
259 |
aaatccctcagaaaccaactgcaaatccaacccccatgccaagatacaatgactct |
314 |
Q |
| |
|
||||||| |||||||| ||||||||||| || |||||||| | |||||| |||||| |
|
|
| T |
18148259 |
aaatcccccagaaacctactgcaaatcccactcccatgcctaaatacaacgactct |
18148204 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr3; HSP #16
Raw Score: 72; E-Value: 1e-32
Query Start/End: Original strand, 159 - 326
Target Start/End: Complemental strand, 19394690 - 19394523
Alignment:
| Q |
159 |
tttaactttacaatcgaagtaacatagagcttgtcacccactctatcaataaaccgatagtatgcatgcctccattttgtaatgagaaacaaagaaccga |
258 |
Q |
| |
|
||||||||||| || || ||||||||||||||||||| |||| || |||| |||| || |||||||||||||||| |||| |||||||||||||| |
|
|
| T |
19394690 |
tttaactttaccgtcaaaataacatagagcttgtcacctactccatatataacccgaaagcatgcatgcctccatttcctaataagaaacaaagaaccac |
19394591 |
T |
|
| Q |
259 |
aaatccctcagaaaccaactgcaaatccaacccccatgccaagatacaatgactcttttgcagagtct |
326 |
Q |
| |
|
||||||| |||||||| |||||||||||||| ||||| || ||||||||||| |||||| ||||||| |
|
|
| T |
19394590 |
aaatcccccagaaacctactgcaaatccaactcccatccctagatacaatgattcttttatagagtct |
19394523 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr3; HSP #17
Raw Score: 71; E-Value: 4e-32
Query Start/End: Original strand, 159 - 317
Target Start/End: Complemental strand, 17951364 - 17951206
Alignment:
| Q |
159 |
tttaactttacaatcgaagtaacatagagcttgtcacccactctatcaataaaccgatagtatgcatgcctccattttgtaatgagaaacaaagaaccga |
258 |
Q |
| |
|
||||||||||| || |||| ||||||||| ||| |||||||| || ||||||||| |||||||||||||||||||| ||| |||||||||||||| |
|
|
| T |
17951364 |
tttaactttaccttcaaagttacatagagcctgttacccactccatatataaaccgaaagtatgcatgcctccattttcgaataagaaacaaagaaccac |
17951265 |
T |
|
| Q |
259 |
aaatccctcagaaaccaactgcaaatccaacccccatgccaagatacaatgactctttt |
317 |
Q |
| |
|
||||||| |||||||| ||||||||||| || ||||| ||||| |||||||| |||||| |
|
|
| T |
17951264 |
aaatcccccagaaacctactgcaaatcccactcccataccaaggtacaatgattctttt |
17951206 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr3; HSP #18
Raw Score: 71; E-Value: 4e-32
Query Start/End: Original strand, 159 - 317
Target Start/End: Complemental strand, 18017563 - 18017405
Alignment:
| Q |
159 |
tttaactttacaatcgaagtaacatagagcttgtcacccactctatcaataaaccgatagtatgcatgcctccattttgtaatgagaaacaaagaaccga |
258 |
Q |
| |
|
||||||||||| ||| |||| ||||| || ||| |||||||| || ||||||||| | |||||||||||||||||| ||||||||||||||||||| |
|
|
| T |
18017563 |
tttaactttaccatcaaagttacataaagtctgttacccactccatatataaaccgaaaatatgcatgcctccattttctaatgagaaacaaagaaccac |
18017464 |
T |
|
| Q |
259 |
aaatccctcagaaaccaactgcaaatccaacccccatgccaagatacaatgactctttt |
317 |
Q |
| |
|
||||||| |||||||| ||||||| ||||| |||||||| ||||||||||| |||||| |
|
|
| T |
18017463 |
aaatcccccagaaacctgctgcaaagccaactcccatgcctagatacaatgattctttt |
18017405 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr3; HSP #19
Raw Score: 71; E-Value: 4e-32
Query Start/End: Original strand, 159 - 317
Target Start/End: Complemental strand, 19352933 - 19352775
Alignment:
| Q |
159 |
tttaactttacaatcgaagtaacatagagcttgtcacccactctatcaataaaccgatagtatgcatgcctccattttgtaatgagaaacaaagaaccga |
258 |
Q |
| |
|
||||||||||| || |||| ||||| ||| ||| |||||||| || ||||||||| | |||||||||||||||||| |||| |||||||||||||| |
|
|
| T |
19352933 |
tttaactttaccattaaagttacataaagcctgttacccactccatatataaaccgaaaatatgcatgcctccattttctaataagaaacaaagaaccac |
19352834 |
T |
|
| Q |
259 |
aaatccctcagaaaccaactgcaaatccaacccccatgccaagatacaatgactctttt |
317 |
Q |
| |
|
||||||| |||||||| ||||||||||||| |||||||| ||||||||||| |||||| |
|
|
| T |
19352833 |
aaatcccccagaaacctgctgcaaatccaactcccatgcctagatacaatgattctttt |
19352775 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr3; HSP #20
Raw Score: 68; E-Value: 3e-30
Query Start/End: Original strand, 146 - 317
Target Start/End: Complemental strand, 16678761 - 16678590
Alignment:
| Q |
146 |
tctgtcaaagttgtttaactttacaatcgaagtaacatagagcttgtcacccactctatcaataaaccgatagtatgcatgcctccattttgtaatgaga |
245 |
Q |
| |
|
||||| |||||| ||||||||||| ||| |||| ||||| |||||||| ||||||| ||||||||| ||||||||| ||||||||||| |||| ||| |
|
|
| T |
16678761 |
tctgtgaaagttatttaactttaccatcaaagttacatacagcttgtcgcccactccatcaataaattgatagtatgtgtgcctccatttcctaataaga |
16678662 |
T |
|
| Q |
246 |
aacaaagaaccgaaaatccctcagaaaccaactgcaaatccaacccccatgccaagatacaatgactctttt |
317 |
Q |
| |
|
||||||||||| |||| || |||||||| || ||||| ||||| |||| ||| ||||||||||| |||||| |
|
|
| T |
16678661 |
aacaaagaaccacaaataccccagaaacctaccgcaaaaccaactcccaagcccagatacaatgattctttt |
16678590 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr3; HSP #21
Raw Score: 68; E-Value: 3e-30
Query Start/End: Original strand, 159 - 314
Target Start/End: Complemental strand, 19382434 - 19382279
Alignment:
| Q |
159 |
tttaactttacaatcgaagtaacatagagcttgtcacccactctatcaataaaccgatagtatgcatgcctccattttgtaatgagaaacaaagaaccga |
258 |
Q |
| |
|
||||||||||| || || ||||||||||||||||||| |||| || ||||||||| ||||||||||||||||||| |||| ||||| |||||||| |
|
|
| T |
19382434 |
tttaactttaccgtcaaaataacatagagcttgtcacctactccatagataaaccgaaagtatgcatgcctccatttcctaataagaaataaagaaccac |
19382335 |
T |
|
| Q |
259 |
aaatccctcagaaaccaactgcaaatccaacccccatgccaagatacaatgactct |
314 |
Q |
| |
|
||||||| || ||||| ||| |||||||||| |||||||| |||||||| |||||| |
|
|
| T |
19382334 |
aaatcccccaaaaacctactccaaatccaactcccatgcctagatacaacgactct |
19382279 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr3; HSP #22
Raw Score: 67; E-Value: 1e-29
Query Start/End: Original strand, 159 - 317
Target Start/End: Complemental strand, 19465893 - 19465735
Alignment:
| Q |
159 |
tttaactttacaatcgaagtaacatagagcttgtcacccactctatcaataaaccgatagtatgcatgcctccattttgtaatgagaaacaaagaaccga |
258 |
Q |
| |
|
||||||||||| || |||||||||||||||||||||| | || || ||||||||| ||||||||||||||||||| |||| |||||||||||||| |
|
|
| T |
19465893 |
tttaactttaccgtcaaagtaacatagagcttgtcacctattccatatataaaccgaaagtatgcatgcctccatttcctaataagaaacaaagaaccac |
19465794 |
T |
|
| Q |
259 |
aaatccctcagaaaccaactgcaaatccaacccccatgccaagatacaatgactctttt |
317 |
Q |
| |
|
||||||| |||||||| ||||||||||||| ||| | | ||||||||||| |||||| |
|
|
| T |
19465793 |
aaatcccccagaaacctgctgcaaatccaactcccgtccttagatacaatgattctttt |
19465735 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr3; HSP #23
Raw Score: 66; E-Value: 4e-29
Query Start/End: Original strand, 159 - 316
Target Start/End: Complemental strand, 19415725 - 19415568
Alignment:
| Q |
159 |
tttaactttacaatcgaagtaacatagagcttgtcacccactctatcaataaaccgatagtatgcatgcctccattttgtaatgagaaacaaagaaccga |
258 |
Q |
| |
|
||||||||||| | | ||||||||||||| ||| | ||||||||||||||||||| ||||||||||||| |||||| |||| ||||| | |||||| |
|
|
| T |
19415725 |
tttaactttacgaccaaagtaacatagagattgccggccactctatcaataaaccggaagtatgcatgcctgcattttctaataagaaaaatagaaccac |
19415626 |
T |
|
| Q |
259 |
aaatccctcagaaaccaactgcaaatccaacccccatgccaagatacaatgactcttt |
316 |
Q |
| |
|
||||||| |||||||| ||||||||||| || ||||| || ||||||||||| ||||| |
|
|
| T |
19415625 |
aaatcccccagaaacctactgcaaatcccactcccattcctagatacaatgaatcttt |
19415568 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr3; HSP #24
Raw Score: 64; E-Value: 6e-28
Query Start/End: Original strand, 159 - 314
Target Start/End: Complemental strand, 19438487 - 19438332
Alignment:
| Q |
159 |
tttaactttacaatcgaagtaacatagagcttgtcacccactctatcaataaaccgatagtatgcatgcctccattttgtaatgagaaacaaagaaccga |
258 |
Q |
| |
|
||||||||||| ||| |||||||||| || | ||||| |||| |||||| |||||| |||| |||||||||||||| |||| ||||||| |||||| |
|
|
| T |
19438487 |
tttaactttactatcaaagtaacataaagatagtcacacactgtatcaactaaccgaaagtacgcatgcctccatttcctaataagaaacatagaaccac |
19438388 |
T |
|
| Q |
259 |
aaatccctcagaaaccaactgcaaatccaacccccatgccaagatacaatgactct |
314 |
Q |
| |
|
||||||| || ||||| |||||||||||||| |||||||| |||||||| |||||| |
|
|
| T |
19438387 |
aaatcccccaaaaacctactgcaaatccaactcccatgcctagatacaacgactct |
19438332 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr3; HSP #25
Raw Score: 60; E-Value: 1e-25
Query Start/End: Original strand, 159 - 314
Target Start/End: Complemental strand, 19462721 - 19462566
Alignment:
| Q |
159 |
tttaactttacaatcgaagtaacatagagcttgtcacccactctatcaataaaccgatagtatgcatgcctccattttgtaatgagaaacaaagaaccga |
258 |
Q |
| |
|
||||||||||| || ||||||||||||| ||||||||||||||||| |||||| |||| |||||||||||||| ||| |||||||||||||| |
|
|
| T |
19462721 |
tttaactttacggtcaaagtaacatagagaaagtcacccactctatcaactaaccgaaagtacgcatgcctccatttccgaataagaaacaaagaaccac |
19462622 |
T |
|
| Q |
259 |
aaatccctcagaaaccaactgcaaatccaacccccatgccaagatacaatgactct |
314 |
Q |
| |
|
|||| || |||||||| ||||||||||| || |||||||| | |||||| |||||| |
|
|
| T |
19462621 |
aaatgccccagaaacctactgcaaatcccactcccatgcctaaatacaacgactct |
19462566 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr3; HSP #26
Raw Score: 56; E-Value: 4e-23
Query Start/End: Original strand, 162 - 317
Target Start/End: Complemental strand, 18109968 - 18109813
Alignment:
| Q |
162 |
aactttacaatcgaagtaacatagagcttgtcacccactctatcaataaaccgatagtatgcatgcctccattttgtaatgagaaacaaagaaccgaaaa |
261 |
Q |
| |
|
|||||||| ||| | || ||||||||| ||| |||||||| || ||||| ||| ||||||||||||||||||| | || | |||||||||||| ||| |
|
|
| T |
18109968 |
aactttaccatcaatgttacatagagcctgttacccactccatatataaaacgaaagtatgcatgcctccatttcctgataacaaacaaagaaccacaaa |
18109869 |
T |
|
| Q |
262 |
tccctcagaaaccaactgcaaatccaacccccatgccaagatacaatgactctttt |
317 |
Q |
| |
|
|||| |||||||| ||||||||||| || ||||| ||||| |||||||| |||||| |
|
|
| T |
18109868 |
tcccccagaaacctactgcaaatcccactcccataccaaggtacaatgattctttt |
18109813 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr3; HSP #27
Raw Score: 56; E-Value: 4e-23
Query Start/End: Original strand, 159 - 294
Target Start/End: Complemental strand, 19456837 - 19456702
Alignment:
| Q |
159 |
tttaactttacaatcgaagtaacatagagcttgtcacccactctatcaataaaccgatagtatgcatgcctccattttgtaatgagaaacaaagaaccga |
258 |
Q |
| |
|
||||||||||| ||| |||| ||||||| | ||| |||||||| || |||| || | ||||||||||||||||||| |||| |||||||||||||| |
|
|
| T |
19456837 |
tttaactttaccatcaaagttacatagaccctgttacccactccatatataacccaaaagtatgcatgcctccatttcctaataagaaacaaagaaccac |
19456738 |
T |
|
| Q |
259 |
aaatccctcagaaaccaactgcaaatccaaccccca |
294 |
Q |
| |
|
||||||| |||||||| |||||||||||||| |||| |
|
|
| T |
19456737 |
aaatcccccagaaacctactgcaaatccaactccca |
19456702 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr3; HSP #28
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 161 - 252
Target Start/End: Original strand, 24493241 - 24493332
Alignment:
| Q |
161 |
taactttacaatcgaagtaacatagagcttgtcacccactctatcaataaaccgatagtatgcatgcctccattttgtaatgagaaacaaag |
252 |
Q |
| |
|
|||||| || ||| |||| ||||||| | |||||||||||| ||| |||||||| ||||| || ||||||||||| |||| ||||| |||| |
|
|
| T |
24493241 |
taacttcaccatcaaagttacatagatcctgtcacccactccatcgataaaccggtagtacgcgtgcctccatttcctaataagaaataaag |
24493332 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr4 (Bit Score: 88; Significance: 3e-42; HSPs: 2)
Name: chr4
Description:
Target: chr4; HSP #1
Raw Score: 88; E-Value: 3e-42
Query Start/End: Original strand, 157 - 316
Target Start/End: Complemental strand, 15537076 - 15536917
Alignment:
| Q |
157 |
tgtttaactttacaatcgaagtaacatagagcttgtcacccactctatcaataaaccgatagtatgcatgcctccattttgtaatgagaaacaaagaacc |
256 |
Q |
| |
|
||||||||||||| ||| |||||||||||| ||||||||| ||| ||||| |||||||| |||||||||||||||||||| |||| |||||||||||||| |
|
|
| T |
15537076 |
tgtttaactttacgatcaaagtaacatagatcttgtcacctactttatcagtaaaccgaaagtatgcatgcctccattttctaataagaaacaaagaacc |
15536977 |
T |
|
| Q |
257 |
gaaaatccctcagaaaccaactgcaaatccaacccccatgccaagatacaatgactcttt |
316 |
Q |
| |
|
||||||| |||||||| || ||||||||||| ||||| || ||||||||||| ||||| |
|
|
| T |
15536976 |
acaaatcccccagaaacctaccgcaaatccaactcccatccctagatacaatgattcttt |
15536917 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr4; HSP #2
Raw Score: 79; E-Value: 7e-37
Query Start/End: Original strand, 152 - 310
Target Start/End: Original strand, 2709025 - 2709183
Alignment:
| Q |
152 |
aaagttgtttaactttacaatcgaagtaacatagagcttgtcacccactctatcaataaaccgatagtatgcatgcctccattttgtaatgagaaacaaa |
251 |
Q |
| |
|
||||||||||||||||| ||| |||| ||||||||||||||||| |||| |||||||||||||||||||| | ||||||||| |||| ||||||||| |
|
|
| T |
2709025 |
aaagttgtttaactttatcatcaaagttacatagagcttgtcacctactccatcaataaaccgatagtatgtgttcctccatttcctaataagaaacaaa |
2709124 |
T |
|
| Q |
252 |
gaaccgaaaatccctcagaaaccaactgcaaatccaacccccatgccaagatacaatga |
310 |
Q |
| |
|
| ||| ||||||| || ||||| |||||||||||||| |||||||| ||||||||||| |
|
|
| T |
2709125 |
ggaccacaaatcccccaaaaacctactgcaaatccaactcccatgcctagatacaatga |
2709183 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr8 (Bit Score: 83; Significance: 3e-39; HSPs: 1)
Name: chr8
Description:
Target: chr8; HSP #1
Raw Score: 83; E-Value: 3e-39
Query Start/End: Original strand, 160 - 310
Target Start/End: Complemental strand, 8461106 - 8460956
Alignment:
| Q |
160 |
ttaactttacaatcgaagtaacatagagcttgtcacccactctatcaataaaccgatagtatgcatgcctccattttgtaatgagaaacaaagaaccgaa |
259 |
Q |
| |
|
|||||||||| ||| || | |||||||||||||||||| || ||||||||| ||||||||||||||||||||||| |||| |||||||||||||| | |
|
|
| T |
8461106 |
ttaactttaccatcaaaattccatagagcttgtcacccattccatcaataaatcgatagtatgcatgcctccatttcctaataagaaacaaagaaccaca |
8461007 |
T |
|
| Q |
260 |
aatccctcagaaaccaactgcaaatccaacccccatgccaagatacaatga |
310 |
Q |
| |
|
|||||| || ||||| |||||||||||||| |||||||||||||||||||| |
|
|
| T |
8461006 |
aatcccccaaaaacccactgcaaatccaactcccatgccaagatacaatga |
8460956 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr6 (Bit Score: 83; Significance: 3e-39; HSPs: 1)
Name: chr6
Description:
Target: chr6; HSP #1
Raw Score: 83; E-Value: 3e-39
Query Start/End: Original strand, 159 - 317
Target Start/End: Original strand, 13665407 - 13665565
Alignment:
| Q |
159 |
tttaactttacaatcgaagtaacatagagcttgtcacccactctatcaataaaccgatagtatgcatgcctccattttgtaatgagaaacaaagaaccga |
258 |
Q |
| |
|
||||||||||| ||| |||||| |||||| ||||| ||||||||||||| ||||||| || ||||||||||||||||| |||| |||||||||||||| |
|
|
| T |
13665407 |
tttaactttaccatcaaagtaatatagagattgtcgcccactctatcaaaaaaccgaaagcatgcatgcctccattttctaataagaaacaaagaaccac |
13665506 |
T |
|
| Q |
259 |
aaatccctcagaaaccaactgcaaatccaacccccatgccaagatacaatgactctttt |
317 |
Q |
| |
|
| ||||| |||||||| ||||||||||||||||||||||||| | |||||| |||||| |
|
|
| T |
13665507 |
atatcccccagaaacctgctgcaaatccaacccccatgccaaggttcaatgattctttt |
13665565 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
© Oklahoma State University