View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF1461_low_19 (Length: 271)
Name: NF1461_low_19
Description: NF1461
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF1461_low_19 |
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Alignment Details
Target: chr8 (Bit Score: 198; Significance: 1e-108; HSPs: 1)
Name: chr8
Description:
Target: chr8; HSP #1
Raw Score: 198; E-Value: 1e-108
Query Start/End: Original strand, 1 - 260
Target Start/End: Original strand, 6453503 - 6453766
Alignment:
| Q |
1 |
aaaagtctagcagctaaatatccaca----cccttaatgctgaaaaataagaaactgcaagtttagatctgcaaatcaacattatcatatgtttatgaac |
96 |
Q |
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| T |
6453503 |
aaaagtctagcagctaaatatccacaaacacccttaatgctgaaaaataagaaactgcaagtttagatctgcaaatcaacattatcatatgtttatggac |
6453602 |
T |
|
| Q |
97 |
tttttacaatctcaaatatacttataagataaactaatcggttcctcgatannnnnnnaactattgctttttgtttcaaaaagaatgtgtagaataagat |
196 |
Q |
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|||||||||||||||||||||||||||||||||||||| |||||||| ||| |||||||||||| ||||||||||||||||||||||||||||| |
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| T |
6453603 |
tttttacaatctcaaatatacttataagataaactaattggttcctcaatatttttttaactattgctttctgtttcaaaaagaatgtgtagaataagat |
6453702 |
T |
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| Q |
197 |
aataaaaagggttaaaattgtcataggaagataaattattttattggcatggaacgttgagaat |
260 |
Q |
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||||||||| ||||||||||||||||||||||||||||||| ||||||||||||||| |||||| |
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| T |
6453703 |
aataaaaagagttaaaattgtcataggaagataaattatttcattggcatggaacgtagagaat |
6453766 |
T |
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