View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF14620_high_5 (Length: 269)
Name: NF14620_high_5
Description: NF14620
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF14620_high_5 |
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Alignment Details
Target: chr3 (Bit Score: 216; Significance: 1e-119; HSPs: 1)
Name: chr3
Description:
Target: chr3; HSP #1
Raw Score: 216; E-Value: 1e-119
Query Start/End: Original strand, 16 - 251
Target Start/End: Complemental strand, 25652520 - 25652285
Alignment:
| Q |
16 |
atatatagctcaatttacctcaataggaccaggagttgttaatagtgctatgtttgcagaaagtggagggtttaatctacataaaccattatccagagaa |
115 |
Q |
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| T |
25652520 |
atatatagctcaatttacctcaataggaccaggagttgttaatagtgctatgtttgcagaaagagcagggtttaatctacataaaccattatccagagaa |
25652421 |
T |
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| Q |
116 |
catttttgataagacctggttgtattgtagagaagtgcatttacaatgaatttcaactctacctggttatacaataacattgaaaaataataataatcat |
215 |
Q |
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||||||| |||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
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| T |
25652420 |
cattttttataagacccagttgtattgtagagaagtgcatttacaatgaatttcaactctacctggttatacaataacattgaaaaataataataatcat |
25652321 |
T |
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| Q |
216 |
taatattagtatagagtactataacataatttatat |
251 |
Q |
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|||||||||||||||||||||||||||||||||||| |
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| T |
25652320 |
taatattagtatagagtactataacataatttatat |
25652285 |
T |
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