View Alignment

This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.

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 Query
 Query hiting target  Query hiting target's complemental strand
 Query's complemental strand hiting target  Query's complemental strand hiting target's complemental strand

Alignment Overview

Query: NF14620_low_8 (Length: 237)

Name: NF14620_low_8
Description: NF14620
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)


[»] NF14620_low_8
NF14620_low_8
[»] chr6 (1 HSPs)
chr6 (131-220)||(3110922-3111011)


Alignment Details
Target: chr6 (Bit Score: 90; Significance: 1e-43; HSPs: 1)
Name: chr6
Description:

Target: chr6; HSP #1
Raw Score: 90; E-Value: 1e-43
Query Start/End: Original strand, 131 - 220
Target Start/End: Complemental strand, 3111011 - 3110922
Alignment:
131 cattttatctttcaaaaccttgttagtatattctgctgagatggaattagtagtggtagtttgttagaagttagttattcctctctcttg 220  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
3111011 cattttatctttcaaaaccttgttagtatattctgctgagatggaattagtagtggtagtttgttagaagttagttattcctctctcttg 3110922  T

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