View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF14620_low_9 (Length: 229)
Name: NF14620_low_9
Description: NF14620
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF14620_low_9 |
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Alignment Details
Target: chr1 (Bit Score: 201; Significance: 1e-110; HSPs: 1)
Name: chr1
Description:
Target: chr1; HSP #1
Raw Score: 201; E-Value: 1e-110
Query Start/End: Original strand, 9 - 213
Target Start/End: Original strand, 50241671 - 50241875
Alignment:
| Q |
9 |
caccaattccattgttagtatcacacatgaaccttgaagaggctaagctaggagagtacactattccaaaagagtctaaggtagttgttaatgcttggtg |
108 |
Q |
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| T |
50241671 |
caccaattccattgttagtaccacacatgaaccttgaagaggctaagctaggagagtacactattccaaaagagtctaaggtagttgttaatgcttggtg |
50241770 |
T |
|
| Q |
109 |
gcttgcaaataatccattatggtgggaaaagccagaagagttcaggccagagaggtatttggaagaagaaaatggaattgatgctgttgctggtggaggg |
208 |
Q |
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|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
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| T |
50241771 |
gcttgcaaataatccattatggtgggaaaagccagaagagttcaggccagagaggtatttggaagaagaaaatggaattgatgctgttgctggtggaggg |
50241870 |
T |
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| Q |
209 |
aaagt |
213 |
Q |
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||||| |
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| T |
50241871 |
aaagt |
50241875 |
T |
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