View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF14621_high_3 (Length: 279)
Name: NF14621_high_3
Description: NF14621
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF14621_high_3 |
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Alignment Details
Target: chr6 (Bit Score: 167; Significance: 2e-89; HSPs: 1)
Name: chr6
Description:
Target: chr6; HSP #1
Raw Score: 167; E-Value: 2e-89
Query Start/End: Original strand, 36 - 221
Target Start/End: Original strand, 28935784 - 28935967
Alignment:
| Q |
36 |
atgatttgtgaaggacgagtaaggttaaaggttaaggatgatatgaaagttttgaaggtataagttctcattatatactactatgtttttaagctttctc |
135 |
Q |
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| T |
28935784 |
atgatttgtgaaggacgagtaaggttaaaggttaaggatgatatgaaagtt--gaaggtataagttctcattatatactactatgtttttaagctttctc |
28935881 |
T |
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| Q |
136 |
ggattttttcactgaaatttagattttactgttattcttgtaacaaaaataacattttgttattgttgacataaagtaacaaaaca |
221 |
Q |
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| T |
28935882 |
ggattttttcactgaaatttagattttgctgttattcttgtaacaaaaataacattttgttattgtcgacataaagtaacaaaaca |
28935967 |
T |
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