View Alignment

This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.

Legend
 Query
 Query hiting target  Query hiting target's complemental strand
 Query's complemental strand hiting target  Query's complemental strand hiting target's complemental strand

Alignment Overview

Query: NF14622_low_1 (Length: 509)

Name: NF14622_low_1
Description: NF14622
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)


[»] NF14622_low_1
NF14622_low_1
[»] chr7 (65 HSPs)
chr7 (18-211)||(22925405-22925598)
chr7 (395-509)||(22925198-22925312)
chr7 (395-502)||(31445359-31445468)
chr7 (395-492)||(41189474-41189573)
chr7 (397-463)||(1284459-1284525)
chr7 (395-509)||(35072276-35072392)
chr7 (395-509)||(35098617-35098733)
chr7 (406-509)||(41863543-41863646)
chr7 (409-504)||(44649247-44649342)
chr7 (410-499)||(30064497-30064586)
chr7 (411-504)||(40417831-40417926)
chr7 (406-482)||(4292480-4292558)
chr7 (396-499)||(35627944-35628049)
chr7 (395-502)||(48062098-48062207)
chr7 (395-492)||(3937054-3937151)
chr7 (408-504)||(36207092-36207188)
chr7 (395-463)||(38259105-38259173)
chr7 (405-473)||(3683583-3683653)
chr7 (424-498)||(35207573-35207647)
chr7 (396-473)||(22605402-22605479)
chr7 (406-492)||(38956549-38956637)
chr7 (395-473)||(40227116-40227196)
chr7 (406-463)||(41650760-41650817)
chr7 (406-504)||(43025392-43025492)
chr7 (402-487)||(24614252-24614339)
chr7 (395-498)||(33578241-33578344)
chr7 (406-482)||(36352525-36352603)
chr7 (406-463)||(34108818-34108873)
chr7 (395-482)||(41430092-41430181)
chr7 (395-482)||(42584844-42584933)
chr7 (395-461)||(10700147-10700215)
chr7 (395-485)||(12007123-12007215)
chr7 (406-460)||(24532905-24532961)
chr7 (406-492)||(40854585-40854673)
chr7 (402-463)||(18505822-18505885)
chr7 (395-492)||(35822905-35823004)
chr7 (406-471)||(36703823-36703890)
chr7 (395-492)||(44895503-44895602)
chr7 (413-504)||(12504505-12504596)
chr7 (395-463)||(27568059-27568129)
chr7 (395-463)||(30941427-30941501)
chr7 (433-492)||(38073301-38073360)
chr7 (395-492)||(41989671-41989772)
chr7 (450-509)||(46022181-46022240)
chr7 (395-479)||(47448868-47448954)
chr7 (410-456)||(44651197-44651243)
chr7 (397-492)||(48145568-48145665)
chr7 (395-492)||(1471221-1471320)
chr7 (431-492)||(25192848-25192909)
chr7 (397-490)||(25887906-25887999)
chr7 (395-504)||(32529775-32529884)
chr7 (409-463)||(34507165-34507221)
chr7 (395-485)||(34978338-34978430)
chr7 (395-440)||(37969972-37970017)
chr7 (406-439)||(39029911-39029944)
chr7 (395-481)||(41018705-41018793)
chr7 (395-440)||(41458885-41458930)
chr7 (406-499)||(42552952-42553045)
chr7 (406-443)||(47379628-47379665)
chr7 (395-439)||(155967-156011)
chr7 (408-509)||(17002391-17002493)
chr7 (395-439)||(28548207-28548251)
chr7 (433-485)||(29723862-29723914)
chr7 (395-456)||(43942678-43942741)
chr7 (395-492)||(44496733-44496832)
[»] chr6 (38 HSPs)
chr6 (406-509)||(26595401-26595506)
chr6 (419-504)||(277056-277143)
chr6 (395-492)||(22079494-22079593)
chr6 (397-509)||(3853221-3853335)
chr6 (404-504)||(5694070-5694172)
chr6 (395-492)||(34047428-34047527)
chr6 (408-492)||(32316859-32316945)
chr6 (395-490)||(5080500-5080597)
chr6 (406-504)||(31883222-31883322)
chr6 (431-499)||(4820446-4820514)
chr6 (410-487)||(11612244-11612323)
chr6 (395-492)||(2241956-2242051)
chr6 (395-492)||(17551310-17551408)
chr6 (397-492)||(13689925-13690022)
chr6 (406-492)||(552845-552933)
chr6 (406-492)||(8098528-8098616)
chr6 (406-492)||(18737498-18737586)
chr6 (395-492)||(15974649-15974748)
chr6 (439-487)||(33603216-33603264)
chr6 (406-457)||(2060601-2060652)
chr6 (410-481)||(3552097-3552168)
chr6 (450-509)||(16199548-16199607)
chr6 (395-438)||(16368033-16368076)
chr6 (406-504)||(5522558-5522656)
chr6 (395-482)||(13423010-13423099)
chr6 (397-492)||(25127761-25127860)
chr6 (406-481)||(30945866-30945943)
chr6 (395-473)||(5739713-5739793)
chr6 (404-466)||(6271400-6271464)
chr6 (395-485)||(8645350-8645442)
chr6 (395-481)||(17181877-17181965)
chr6 (408-486)||(24900828-24900908)
chr6 (395-457)||(25811804-25811868)
chr6 (395-492)||(1376406-1376507)
chr6 (395-492)||(1384154-1384255)
chr6 (439-499)||(11014914-11014974)
chr6 (433-485)||(14910258-14910310)
chr6 (395-439)||(23653879-23653923)
[»] chr8 (67 HSPs)
chr8 (402-486)||(27854705-27854789)
chr8 (406-502)||(10839403-10839501)
chr8 (406-492)||(37133793-37133881)
chr8 (395-489)||(11253476-11253572)
chr8 (395-485)||(26026938-26027030)
chr8 (402-492)||(40517306-40517398)
chr8 (406-502)||(42768258-42768354)
chr8 (395-492)||(43397822-43397921)
chr8 (395-482)||(33100411-33100498)
chr8 (418-481)||(34694846-34694909)
chr8 (395-486)||(10902746-10902839)
chr8 (395-492)||(6440123-6440222)
chr8 (406-490)||(24503158-24503242)
chr8 (433-509)||(29025341-29025417)
chr8 (406-502)||(32501117-32501215)
chr8 (406-481)||(43632280-43632355)
chr8 (406-492)||(5277430-5277518)
chr8 (406-492)||(5740716-5740804)
chr8 (406-492)||(12898860-12898948)
chr8 (395-485)||(44061759-44061851)
chr8 (397-463)||(6511821-6511887)
chr8 (406-492)||(7271904-7271990)
chr8 (395-498)||(23754631-23754736)
chr8 (408-487)||(36816552-36816633)
chr8 (410-492)||(10731602-10731686)
chr8 (406-492)||(12734942-12735030)
chr8 (406-492)||(31249455-31249543)
chr8 (406-463)||(33605039-33605096)
chr8 (433-478)||(39856119-39856164)
chr8 (406-492)||(41639728-41639818)
chr8 (408-482)||(45405586-45405662)
chr8 (406-499)||(7598761-7598855)
chr8 (395-492)||(25830176-25830275)
chr8 (406-463)||(26000590-26000649)
chr8 (395-492)||(35067202-35067301)
chr8 (395-492)||(36660381-36660480)
chr8 (406-490)||(22719492-22719578)
chr8 (395-487)||(27325799-27325893)
chr8 (395-463)||(39211083-39211153)
chr8 (395-472)||(157097-157175)
chr8 (406-485)||(5600924-5601005)
chr8 (406-485)||(5639615-5639696)
chr8 (402-463)||(7603627-7603686)
chr8 (395-457)||(13970961-13971022)
chr8 (395-466)||(24798314-24798387)
chr8 (406-485)||(25987724-25987805)
chr8 (397-464)||(32020422-32020493)
chr8 (395-499)||(32133369-32133470)
chr8 (409-504)||(38958470-38958567)
chr8 (400-482)||(3413133-3413217)
chr8 (395-492)||(10644732-10644831)
chr8 (406-439)||(21526266-21526299)
chr8 (395-457)||(29028927-29028990)
chr8 (395-492)||(67091-67190)
chr8 (414-490)||(144189-144265)
chr8 (406-463)||(3547119-3547178)
chr8 (410-467)||(6445233-6445292)
chr8 (395-439)||(7325756-7325800)
chr8 (395-439)||(11114655-11114699)
chr8 (395-439)||(12490758-12490802)
chr8 (433-493)||(13106561-13106621)
chr8 (395-439)||(24116081-24116125)
chr8 (395-439)||(24946043-24946087)
chr8 (395-456)||(34718157-34718219)
chr8 (406-487)||(37449361-37449444)
chr8 (395-439)||(43285948-43285992)
chr8 (395-439)||(43715916-43715960)
[»] chr4 (88 HSPs)
chr4 (395-492)||(53801690-53801787)
chr4 (406-502)||(37997306-37997404)
chr4 (406-492)||(29175279-29175365)
chr4 (406-463)||(24045297-24045354)
chr4 (406-463)||(40693584-40693641)
chr4 (410-504)||(56474686-56474778)
chr4 (397-492)||(27051017-27051114)
chr4 (395-492)||(2268438-2268537)
chr4 (395-492)||(50608555-50608654)
chr4 (395-509)||(2575704-2575818)
chr4 (408-498)||(7632386-7632478)
chr4 (426-499)||(32130163-32130236)
chr4 (406-492)||(37297101-37297188)
chr4 (395-456)||(38792858-38792919)
chr4 (395-509)||(39478476-39478594)
chr4 (410-504)||(42853633-42853729)
chr4 (395-492)||(10250446-10250545)
chr4 (395-463)||(39606008-39606078)
chr4 (397-492)||(44539779-44539874)
chr4 (406-481)||(52895280-52895358)
chr4 (395-485)||(5386414-5386506)
chr4 (406-492)||(19232065-19232152)
chr4 (406-492)||(26732277-26732365)
chr4 (433-502)||(39654905-39654974)
chr4 (406-492)||(40348846-40348934)
chr4 (406-492)||(46634152-46634240)
chr4 (408-498)||(50721669-50721761)
chr4 (406-492)||(50831686-50831774)
chr4 (395-492)||(1627489-1627588)
chr4 (395-443)||(6520813-6520861)
chr4 (406-491)||(11068740-11068827)
chr4 (408-509)||(19473870-19473973)
chr4 (395-504)||(21775261-21775372)
chr4 (395-492)||(31641496-31641595)
chr4 (395-492)||(51986083-51986182)
chr4 (395-479)||(149428-149514)
chr4 (406-482)||(31574880-31574958)
chr4 (450-509)||(34616659-34616718)
chr4 (431-502)||(38376411-38376482)
chr4 (397-492)||(49449094-49449189)
chr4 (424-486)||(11672060-11672122)
chr4 (395-490)||(38134394-38134491)
chr4 (395-481)||(52223224-52223310)
chr4 (402-472)||(1816626-1816698)
chr4 (395-497)||(29891886-29891990)
chr4 (395-504)||(37060359-37060467)
chr4 (397-487)||(43175027-43175119)
chr4 (395-485)||(51255788-51255880)
chr4 (395-439)||(5249910-5249954)
chr4 (408-461)||(16019531-16019586)
chr4 (395-492)||(23369263-23369362)
chr4 (395-472)||(28458328-28458406)
chr4 (395-492)||(29531537-29531636)
chr4 (395-439)||(42490950-42490994)
chr4 (395-467)||(4756454-4756528)
chr4 (450-509)||(38382419-38382478)
chr4 (395-487)||(39195098-39195192)
chr4 (395-482)||(47015049-47015136)
chr4 (450-509)||(47181939-47181998)
chr4 (450-509)||(48402111-48402170)
chr4 (395-463)||(50890033-50890103)
chr4 (406-504)||(26492061-26492159)
chr4 (406-509)||(27354268-27354373)
chr4 (395-502)||(38338843-38338951)
chr4 (395-481)||(41849732-41849821)
chr4 (408-499)||(45257073-45257166)
chr4 (395-485)||(5932701-5932793)
chr4 (408-494)||(12387594-12387682)
chr4 (395-485)||(18315979-18316071)
chr4 (406-492)||(24575782-24575870)
chr4 (406-499)||(26724896-26724988)
chr4 (406-439)||(31657971-31658004)
chr4 (406-456)||(38381043-38381095)
chr4 (395-485)||(38519835-38519927)
chr4 (395-492)||(40590642-40590739)
chr4 (395-485)||(54000740-54000832)
chr4 (451-504)||(56363964-56364017)
chr4 (406-447)||(56557786-56557827)
chr4 (395-439)||(1031796-1031840)
chr4 (395-439)||(2109473-2109517)
chr4 (365-463)||(4974111-4974211)
chr4 (395-439)||(15596437-15596481)
chr4 (397-462)||(32223975-32224042)
chr4 (395-439)||(34537971-34538015)
chr4 (395-439)||(40983187-40983231)
chr4 (395-439)||(44257715-44257759)
chr4 (406-499)||(46213022-46213117)
chr4 (395-439)||(49585036-49585080)
[»] chr3 (81 HSPs)
chr3 (395-492)||(44413853-44413950)
chr3 (406-481)||(32587739-32587814)
chr3 (395-492)||(35377012-35377111)
chr3 (408-509)||(51982153-51982256)
chr3 (397-456)||(47742328-47742387)
chr3 (406-504)||(42357003-42357101)
chr3 (395-492)||(5114119-5114218)
chr3 (395-504)||(5244270-5244381)
chr3 (395-492)||(38926669-38926768)
chr3 (395-492)||(41505532-41505631)
chr3 (395-492)||(42358569-42358668)
chr3 (404-467)||(1340137-1340200)
chr3 (408-492)||(33791701-33791787)
chr3 (395-493)||(288767-288867)
chr3 (406-504)||(45711358-45711458)
chr3 (406-463)||(6178385-6178444)
chr3 (409-509)||(13348048-13348150)
chr3 (397-485)||(34456834-34456924)
chr3 (408-492)||(37503678-37503764)
chr3 (406-492)||(54007516-54007602)
chr3 (402-492)||(12762620-12762712)
chr3 (406-492)||(20547921-20548009)
chr3 (406-492)||(27541433-27541521)
chr3 (397-487)||(44463400-44463492)
chr3 (409-504)||(14226624-14226720)
chr3 (395-492)||(35597203-35597302)
chr3 (433-509)||(37056971-37057047)
chr3 (395-492)||(49021753-49021852)
chr3 (406-463)||(50314677-50314736)
chr3 (395-484)||(50876301-50876392)
chr3 (395-504)||(52254057-52254168)
chr3 (418-473)||(35299824-35299879)
chr3 (406-490)||(39629771-39629857)
chr3 (433-492)||(41309198-41309257)
chr3 (395-463)||(48176810-48176880)
chr3 (397-504)||(19149033-19149142)
chr3 (408-509)||(11630664-11630765)
chr3 (406-492)||(36670945-36671033)
chr3 (406-492)||(36755981-36756069)
chr3 (395-481)||(46966042-46966130)
chr3 (406-492)||(52939703-52939791)
chr3 (395-481)||(55361175-55361263)
chr3 (395-460)||(13735170-13735237)
chr3 (395-492)||(16969497-16969596)
chr3 (395-492)||(26014853-26014952)
chr3 (395-492)||(27511766-27511865)
chr3 (406-463)||(28700513-28700572)
chr3 (432-504)||(42889065-42889137)
chr3 (407-492)||(44856006-44856093)
chr3 (395-492)||(46623948-46624047)
chr3 (395-492)||(47472370-47472469)
chr3 (395-439)||(48405452-48405496)
chr3 (450-498)||(49087032-49087080)
chr3 (395-453)||(17550181-17550240)
chr3 (450-509)||(21217610-21217669)
chr3 (450-509)||(23592556-23592615)
chr3 (402-490)||(28539673-28539763)
chr3 (406-481)||(52564591-52564666)
chr3 (395-482)||(26452663-26452752)
chr3 (407-486)||(44413332-44413413)
chr3 (397-492)||(52714777-52714874)
chr3 (406-463)||(3648632-3648689)
chr3 (395-485)||(4494174-4494266)
chr3 (410-492)||(7668119-7668202)
chr3 (397-487)||(8847153-8847245)
chr3 (395-457)||(14207223-14207287)
chr3 (395-457)||(14214971-14215035)
chr3 (395-492)||(29573286-29573385)
chr3 (406-439)||(30805589-30805622)
chr3 (395-439)||(7294085-7294129)
chr3 (395-439)||(9557908-9557952)
chr3 (395-439)||(16295505-16295549)
chr3 (433-485)||(32145923-32145975)
chr3 (397-509)||(33374536-33374650)
chr3 (433-481)||(34532270-34532318)
chr3 (449-509)||(44383286-44383346)
chr3 (406-463)||(44813407-44813466)
chr3 (395-456)||(48353038-48353101)
chr3 (395-492)||(49761117-49761216)
chr3 (395-492)||(52485514-52485613)
chr3 (395-439)||(55322702-55322746)
[»] chr1 (86 HSPs)
chr1 (406-502)||(30570578-30570674)
chr1 (395-509)||(9566874-9566990)
chr1 (395-492)||(29359680-29359777)
chr1 (395-463)||(36954699-36954767)
chr1 (395-492)||(37619585-37619684)
chr1 (395-492)||(43775247-43775346)
chr1 (395-486)||(37685372-37685463)
chr1 (395-486)||(37700055-37700146)
chr1 (406-492)||(50932358-50932444)
chr1 (395-509)||(9987993-9988109)
chr1 (395-492)||(649810-649909)
chr1 (395-492)||(14983814-14983913)
chr1 (395-504)||(31826992-31827103)
chr1 (408-492)||(27533415-27533501)
chr1 (395-504)||(4466736-4466847)
chr1 (395-492)||(8350130-8350226)
chr1 (395-485)||(47642544-47642636)
chr1 (395-485)||(48858865-48858957)
chr1 (408-490)||(49065297-49065381)
chr1 (395-492)||(33100849-33100948)
chr1 (395-492)||(35369741-35369840)
chr1 (395-492)||(50775087-50775186)
chr1 (397-456)||(3558890-3558949)
chr1 (406-509)||(19947658-19947761)
chr1 (410-509)||(2269486-2269587)
chr1 (395-502)||(18512264-18512373)
chr1 (406-492)||(49020336-49020422)
chr1 (406-492)||(31088233-31088321)
chr1 (395-491)||(45640342-45640440)
chr1 (395-492)||(18434836-18434935)
chr1 (395-492)||(27464988-27465087)
chr1 (395-492)||(33076161-33076260)
chr1 (407-492)||(44914503-44914590)
chr1 (408-504)||(10627729-10627827)
chr1 (395-499)||(26021000-26021105)
chr1 (406-501)||(37516577-37516672)
chr1 (395-461)||(1689433-1689499)
chr1 (450-504)||(21401496-21401550)
chr1 (408-487)||(25672396-25672477)
chr1 (395-457)||(30536033-30536095)
chr1 (402-493)||(43367831-43367924)
chr1 (395-490)||(44519084-44519181)
chr1 (421-504)||(51571265-51571350)
chr1 (406-463)||(1821065-1821122)
chr1 (406-492)||(23645463-23645551)
chr1 (395-485)||(48983605-48983697)
chr1 (395-492)||(3851199-3851298)
chr1 (395-492)||(12999753-12999852)
chr1 (395-492)||(19055690-19055789)
chr1 (395-492)||(34817975-34818074)
chr1 (404-457)||(37178156-37178211)
chr1 (416-500)||(2556694-2556780)
chr1 (433-492)||(3981957-3982016)
chr1 (397-492)||(12657265-12657363)
chr1 (413-509)||(30467447-30467545)
chr1 (408-492)||(37274964-37275050)
chr1 (408-504)||(48261194-48261292)
chr1 (417-487)||(6693222-6693292)
chr1 (406-473)||(6949930-6949999)
chr1 (406-504)||(18639626-18639724)
chr1 (404-463)||(26208193-26208254)
chr1 (416-466)||(29246438-29246488)
chr1 (406-463)||(31433543-31433601)
chr1 (418-504)||(32923313-32923399)
chr1 (395-441)||(40680827-40680873)
chr1 (435-509)||(50149029-50149103)
chr1 (395-502)||(50726169-50726278)
chr1 (395-482)||(52437536-52437625)
chr1 (411-493)||(3159433-3159517)
chr1 (408-509)||(6809636-6809737)
chr1 (395-457)||(18336188-18336251)
chr1 (395-457)||(35136886-35136949)
chr1 (406-504)||(43560257-43560357)
chr1 (395-440)||(46903511-46903556)
chr1 (406-492)||(48470691-48470779)
chr1 (406-442)||(1690487-1690523)
chr1 (395-439)||(2827696-2827740)
chr1 (406-463)||(8846026-8846085)
chr1 (395-439)||(11897215-11897259)
chr1 (395-443)||(15059681-15059729)
chr1 (395-439)||(15470042-15470086)
chr1 (395-439)||(21433386-21433430)
chr1 (395-492)||(26469400-26469499)
chr1 (395-439)||(28457333-28457377)
chr1 (406-481)||(35026942-35027018)
chr1 (395-439)||(40612155-40612199)
[»] chr2 (70 HSPs)
chr2 (397-492)||(2076612-2076709)
chr2 (395-504)||(43487420-43487531)
chr2 (406-492)||(41195636-41195724)
chr2 (395-492)||(18254140-18254239)
chr2 (395-492)||(27490661-27490760)
chr2 (395-502)||(8848618-8848725)
chr2 (395-502)||(9207631-9207740)
chr2 (416-502)||(33273508-33273594)
chr2 (395-485)||(36587408-36587498)
chr2 (406-492)||(41042306-41042394)
chr2 (433-492)||(37737902-37737961)
chr2 (406-504)||(42430702-42430802)
chr2 (397-492)||(6049276-6049372)
chr2 (395-492)||(6511292-6511391)
chr2 (395-492)||(9647173-9647272)
chr2 (410-499)||(19642654-19642745)
chr2 (397-457)||(21611626-21611686)
chr2 (395-492)||(34945021-34945120)
chr2 (395-504)||(42091423-42091534)
chr2 (395-467)||(12889788-12889861)
chr2 (427-504)||(3412473-3412551)
chr2 (406-456)||(6842526-6842576)
chr2 (408-498)||(1352443-1352535)
chr2 (395-492)||(6336294-6336391)
chr2 (406-504)||(9194293-9194393)
chr2 (406-447)||(10833623-10833664)
chr2 (410-492)||(32477388-32477472)
chr2 (402-447)||(38821415-38821460)
chr2 (406-492)||(44977430-44977518)
chr2 (397-486)||(7698214-7698305)
chr2 (395-492)||(9760059-9760158)
chr2 (404-497)||(16973687-16973782)
chr2 (402-499)||(31414958-31415057)
chr2 (406-479)||(31578487-31578562)
chr2 (408-481)||(33583164-33583239)
chr2 (395-464)||(40700237-40700308)
chr2 (395-507)||(28494901-28495015)
chr2 (410-504)||(39430710-39430805)
chr2 (450-509)||(41056661-41056720)
chr2 (402-457)||(42530201-42530256)
chr2 (395-463)||(42532698-42532768)
chr2 (407-482)||(1040567-1040644)
chr2 (395-486)||(1248727-1248820)
chr2 (406-492)||(10060367-10060453)
chr2 (409-492)||(22416268-22416353)
chr2 (406-457)||(30784000-30784053)
chr2 (409-463)||(2144775-2144831)
chr2 (406-479)||(16049229-16049302)
chr2 (435-480)||(22445967-22446012)
chr2 (395-492)||(23690439-23690539)
chr2 (410-443)||(28277748-28277781)
chr2 (395-457)||(29449253-29449317)
chr2 (395-504)||(32344540-32344649)
chr2 (395-440)||(34373046-34373091)
chr2 (395-481)||(39147807-39147895)
chr2 (406-504)||(44050068-44050167)
chr2 (408-440)||(4858167-4858199)
chr2 (395-456)||(7084681-7084744)
chr2 (395-439)||(10472133-10472177)
chr2 (406-463)||(14328434-14328493)
chr2 (395-439)||(20247853-20247897)
chr2 (406-482)||(21738558-21738634)
chr2 (395-447)||(23352883-23352934)
chr2 (395-504)||(28245770-28245879)
chr2 (395-492)||(29349547-29349646)
chr2 (406-463)||(33737293-33737352)
chr2 (406-463)||(34215317-34215376)
chr2 (395-456)||(36644046-36644109)
chr2 (395-439)||(40721812-40721856)
chr2 (395-439)||(43725246-43725290)
[»] chr5 (63 HSPs)
chr5 (395-492)||(7552898-7552995)
chr5 (395-492)||(33037561-33037660)
chr5 (395-504)||(41321296-41321407)
chr5 (406-481)||(20270623-20270698)
chr5 (397-481)||(33599006-33599091)
chr5 (406-509)||(5168235-5168340)
chr5 (411-481)||(6596390-6596460)
chr5 (406-481)||(21943637-21943714)
chr5 (406-468)||(35075532-35075594)
chr5 (395-502)||(36738989-36739098)
chr5 (395-492)||(2972364-2972464)
chr5 (397-502)||(19844231-19844336)
chr5 (395-492)||(7287120-7287219)
chr5 (406-453)||(11148564-11148611)
chr5 (410-502)||(27487943-27488037)
chr5 (408-492)||(33958190-33958276)
chr5 (408-491)||(1274412-1274497)
chr5 (397-504)||(13309926-13310035)
chr5 (397-492)||(35646426-35646523)
chr5 (409-492)||(39591735-39591820)
chr5 (409-492)||(39592127-39592212)
chr5 (406-488)||(4719703-4719787)
chr5 (402-463)||(36321757-36321818)
chr5 (395-492)||(26791175-26791274)
chr5 (406-471)||(35649940-35650006)
chr5 (395-439)||(37172740-37172784)
chr5 (408-483)||(9168106-9168181)
chr5 (395-487)||(39054628-39054722)
chr5 (395-461)||(26686923-26686989)
chr5 (395-461)||(26956654-26956720)
chr5 (397-504)||(35567544-35567653)
chr5 (395-485)||(611906-611998)
chr5 (406-492)||(19952052-19952140)
chr5 (406-460)||(22649624-22649680)
chr5 (406-492)||(28306063-28306151)
chr5 (403-463)||(3564589-3564649)
chr5 (395-464)||(14532546-14532617)
chr5 (395-460)||(19521966-19522033)
chr5 (395-472)||(20770173-20770251)
chr5 (408-493)||(21156042-21156129)
chr5 (420-492)||(21353212-21353284)
chr5 (395-492)||(22098297-22098396)
chr5 (395-504)||(27546105-27546218)
chr5 (395-504)||(28467372-28467483)
chr5 (406-463)||(29463048-29463107)
chr5 (408-467)||(887618-887677)
chr5 (450-509)||(17626084-17626143)
chr5 (406-493)||(884494-884583)
chr5 (395-486)||(1079889-1079982)
chr5 (433-467)||(17247725-17247759)
chr5 (395-441)||(18395152-18395198)
chr5 (396-509)||(22972160-22972274)
chr5 (395-492)||(6940080-6940179)
chr5 (406-492)||(7076499-7076587)
chr5 (395-485)||(13089719-13089811)
chr5 (418-463)||(13375629-13375674)
chr5 (395-453)||(43196595-43196654)
chr5 (395-492)||(1764265-1764364)
chr5 (395-492)||(16690541-16690640)
chr5 (395-439)||(17990255-17990299)
chr5 (395-492)||(18258724-18258823)
chr5 (395-439)||(19127165-19127209)
chr5 (404-453)||(21353486-21353537)
[»] scaffold0087 (1 HSPs)
scaffold0087 (408-492)||(53292-53378)
[»] scaffold0519 (1 HSPs)
scaffold0519 (395-489)||(11822-11919)
[»] scaffold0128 (1 HSPs)
scaffold0128 (395-485)||(10978-11068)
[»] scaffold0184 (1 HSPs)
scaffold0184 (395-481)||(16730-16817)
[»] scaffold0078 (1 HSPs)
scaffold0078 (395-481)||(56027-56114)
[»] scaffold0098 (1 HSPs)
scaffold0098 (395-490)||(49336-49433)
[»] scaffold0067 (1 HSPs)
scaffold0067 (406-492)||(35573-35663)
[»] scaffold0148 (1 HSPs)
scaffold0148 (414-487)||(20837-20912)
[»] scaffold0056 (1 HSPs)
scaffold0056 (395-492)||(76550-76649)
[»] scaffold0662 (1 HSPs)
scaffold0662 (395-482)||(1188-1275)
[»] scaffold0013 (1 HSPs)
scaffold0013 (406-481)||(90012-90087)
[»] scaffold0687 (1 HSPs)
scaffold0687 (402-463)||(1309-1368)
[»] scaffold0085 (1 HSPs)
scaffold0085 (395-462)||(22814-22883)
[»] scaffold0592 (1 HSPs)
scaffold0592 (406-439)||(962-995)
[»] scaffold0027 (1 HSPs)
scaffold0027 (406-464)||(121688-121748)
[»] scaffold0199 (1 HSPs)
scaffold0199 (395-492)||(8709-8808)
[»] scaffold0174 (1 HSPs)
scaffold0174 (395-435)||(34783-34823)
[»] scaffold0041 (1 HSPs)
scaffold0041 (407-492)||(10894-10981)
[»] scaffold0002 (1 HSPs)
scaffold0002 (395-472)||(469588-469667)


Alignment Details
Target: chr7 (Bit Score: 182; Significance: 4e-98; HSPs: 65)
Name: chr7
Description:

Target: chr7; HSP #1
Raw Score: 182; E-Value: 4e-98
Query Start/End: Original strand, 18 - 211
Target Start/End: Complemental strand, 22925598 - 22925405
Alignment:
Q  18 tgcttgtctcgaaagatttcttaaacactctttacatgacaattttcaaaagttgtatattttaaatcttgcttcgagtagctctaatagttgttctggt 117  Q
    |||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||    
T  22925598 tgcttgtctcgaaagacttcttaaacactctttacatgacaattttcaaaagttgtatattttaaatattgcttcgagtagctctaatagttgttctggt 22925499  T
Q  118 ctctataattaactaaattttgagctgagatgattggttttgaggacatgagtaaaattttcgctcgaaatgtaatttgaatttcgcatgtgac 211  Q
    |||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  22925498 ctctataattaactaaattttgagttgagatgattggttttgaggacatgagtaaaattttcgctcgaaatgtaatttgaatttcgcatgtgac 22925405  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #2
Raw Score: 99; E-Value: 1e-48
Query Start/End: Original strand, 395 - 509
Target Start/End: Complemental strand, 22925312 - 22925198
Alignment:
Q  395 acaactatctttctcatactcacattatgtttttaatttctctctattgctttaatttttgtgtcaatatctaattttccttgtaaaattttggttgttt 494  Q
    |||||||||| |||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||| |||||||||||||||||||||||||||    
T  22925312 acaactatctctctcatactcacattatgtttttaatttctctatattgctttaatttttgtgtcaatatcttattttccttgtaaaattttggttgttt 22925213  T
Q  495 caaaaattgtaatat 509  Q
    |||||||||| ||||    
T  22925212 caaaaattgtgatat 22925198  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #3
Raw Score: 55; E-Value: 2e-22
Query Start/End: Original strand, 395 - 502
Target Start/End: Original strand, 31445359 - 31445468
Alignment:
Q  395 acaactatctttctcatactcacattatgtttttaatttctc--tctattgctttaatttttgtgtcaatatctaattttccttgtaaaattttggttgt 492  Q
    |||||| ||||| ||||||||||||||| |||||| ||||||  ||||||||||| ||||||||||||||  || |||||| ||||||||||||| ||||    
T  31445359 acaactttctttttcatactcacattatatttttactttctctctctattgctttgatttttgtgtcaatcactcattttctttgtaaaattttgattgt 31445458  T
Q  493 ttcaaaaatt 502  Q
    | ||||||||    
T  31445459 tgcaaaaatt 31445468  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #4
Raw Score: 53; E-Value: 3e-21
Query Start/End: Original strand, 395 - 492
Target Start/End: Complemental strand, 41189573 - 41189474
Alignment:
Q  395 acaactatctttctcatactcacattatgtttttaatttctctct--attgctttaatttttgtgtcaatatctaattttccttgtaaaattttggttgt 492  Q
    |||||| ||||||||||||||||||||| |||||| |||||||||  ||||||||| |||||||||||||| || |||| | ||||||||||||| ||||    
T  41189573 acaactttctttctcatactcacattatctttttactttctctctctattgctttagtttttgtgtcaatacctcatttcctttgtaaaattttgattgt 41189474  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #5
Raw Score: 51; E-Value: 5e-20
Query Start/End: Original strand, 397 - 463
Target Start/End: Original strand, 1284459 - 1284525
Alignment:
Q  397 aactatctttctcatactcacattatgtttttaatttctctctattgctttaatttttgtgtcaata 463  Q
    |||| ||||| ||||||| |||||||||||||| |||||||||||||||||||||||||||||||||    
T  1284459 aactttctttttcatacttacattatgtttttactttctctctattgctttaatttttgtgtcaata 1284525  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #6
Raw Score: 50; E-Value: 2e-19
Query Start/End: Original strand, 395 - 509
Target Start/End: Complemental strand, 35072392 - 35072276
Alignment:
Q  395 acaactatctttctcatactcacattatgtttttaatttctct--ctattgctttaatttttgtgtcaatatctaattttccttgtaaaattttggttgt 492  Q
    |||||| ||| | ||||| ||||||| | |||||| |||||||  |||||||||| |||||||||||||| ||| |||||| || |||||||||||||||    
T  35072392 acaactttctctttcatagtcacattctatttttactttctctttctattgctttgatttttgtgtcaatgtctcattttctttataaaattttggttgt 35072293  T
Q  493 ttcaaaaattgtaatat 509  Q
    ||||||| |||| ||||    
T  35072292 ttcaaaagttgtcatat 35072276  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #7
Raw Score: 50; E-Value: 2e-19
Query Start/End: Original strand, 395 - 509
Target Start/End: Complemental strand, 35098733 - 35098617
Alignment:
Q  395 acaactatctttctcatactcacattatgtttttaatttctct--ctattgctttaatttttgtgtcaatatctaattttccttgtaaaattttggttgt 492  Q
    |||||| ||| | ||||||||||||| | |||||| |||||||  |||||||||| |||||||||||||| ||| ||||||  | |||||||||||||||    
T  35098733 acaactttctctttcatactcacattctatttttactttctctttctattgctttgatttttgtgtcaatgtctcattttctatataaaattttggttgt 35098634  T
Q  493 ttcaaaaattgtaatat 509  Q
    ||||||| |||| ||||    
T  35098633 ttcaaaagttgtcatat 35098617  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #8
Raw Score: 48; E-Value: 3e-18
Query Start/End: Original strand, 406 - 509
Target Start/End: Complemental strand, 41863646 - 41863543
Alignment:
Q  406 tctcatactcacattatgtttttaatttctctctattgctttaatttttgtgtcaatatctaattttccttgtaaaattttggttgtttcaaaaattgta 505  Q
    |||| ||||||||||||||||||||||||||| |||||||||  |||||||| ||||| || |||||  ||||||||||||| |||| | |||| ||||     
T  41863646 tctcgtactcacattatgtttttaatttctctttattgctttgttttttgtgccaatacctcattttatttgtaaaattttgattgtcttaaaagttgtc 41863547  T
Q  506 atat 509  Q
    ||||    
T  41863546 atat 41863543  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #9
Raw Score: 48; E-Value: 3e-18
Query Start/End: Original strand, 409 - 504
Target Start/End: Complemental strand, 44649342 - 44649247
Alignment:
Q  409 catactcacattatgtttttaatttctctctattgctttaatttttgtgtcaatatctaattttccttgtaaaattttggttgtttcaaaaattgt 504  Q
    |||||| |||||||||||||| ||||||||| || ||||  ||||||||||||||| |||||||| || ||||||||| ||||| |||||| ||||    
T  44649342 catacttacattatgtttttactttctctcttttactttggtttttgtgtcaatatttaattttctttataaaattttagttgtctcaaaagttgt 44649247  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #10
Raw Score: 46; E-Value: 5e-17
Query Start/End: Original strand, 410 - 499
Target Start/End: Original strand, 30064497 - 30064586
Alignment:
Q  410 atactcacattatgtttttaatttctctctattgctttaatttttgtgtcaatatctaattttccttgtaaaattttggttgtttcaaaa 499  Q
    |||||||||||||||||||| ||||||||||||||||| |||||  ||||||||  | |||||| ||||||||||||  |||| ||||||    
T  30064497 atactcacattatgtttttactttctctctattgctttgattttcatgtcaatacatcattttctttgtaaaattttaattgtctcaaaa 30064586  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #11
Raw Score: 45; E-Value: 2e-16
Query Start/End: Original strand, 411 - 504
Target Start/End: Original strand, 40417831 - 40417926
Alignment:
Q  411 tactcacattatgtttttaatttct--ctctattgctttaatttttgtgtcaatatctaattttccttgtaaaattttggttgtttcaaaaattgt 504  Q
    ||||||||||||||||||| |||||  ||||||||||||  ||||| |||||||| || | |||| |||||||||||||||||| |||||| ||||    
T  40417831 tactcacattatgtttttactttctttctctattgctttggtttttatgtcaatacctcactttctttgtaaaattttggttgtctcaaaagttgt 40417926  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #12
Raw Score: 44; E-Value: 8e-16
Query Start/End: Original strand, 406 - 482
Target Start/End: Original strand, 4292480 - 4292558
Alignment:
Q  406 tctcatactcacattatgtttttaatt--tctctctattgctttaatttttgtgtcaatatctaattttccttgtaaaa 482  Q
    |||||||||||||||||||||||| ||  ||||||||||||||| ||||||||  |||||| |||||||| ||||||||    
T  4292480 tctcatactcacattatgtttttactttctctctctattgctttgatttttgtaccaatatttaattttctttgtaaaa 4292558  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #13
Raw Score: 43; E-Value: 0.000000000000003
Query Start/End: Original strand, 396 - 499
Target Start/End: Complemental strand, 35628049 - 35627944
Alignment:
Q  396 caactatctttctcatactcacattatgtttttaatttctctc--tattgctttaatttttgtgtcaatatctaattttccttgtaaaattttggttgtt 493  Q
    ||||| |||||||||||||||||||||||||||| ||| ||||  |||||||||  |||||||||||||| ||  ||||| || ||||||| ||||| |     
T  35628049 caactttctttctcatactcacattatgtttttactttatctccttattgctttggtttttgtgtcaatacctctttttctttataaaattatggttatc 35627950  T
Q  494 tcaaaa 499  Q
    ||||||    
T  35627949 tcaaaa 35627944  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #14
Raw Score: 43; E-Value: 0.000000000000003
Query Start/End: Original strand, 395 - 502
Target Start/End: Original strand, 48062098 - 48062207
Alignment:
Q  395 acaactatctttctcatactcacattatgtttttaatttctc--tctattgctttaatttttgtgtcaatatctaattttccttgtaaaattttggttgt 492  Q
    |||||| ||| ||| ||||||| |||||||||||| ||||||  ||||||| |||  |||||||||||||| || |||||| || |||||||||| ||||    
T  48062098 acaactttctctcttatactcatattatgtttttactttctctctctattgttttggtttttgtgtcaatacctcattttctttataaaattttgattgt 48062197  T
Q  493 ttcaaaaatt 502  Q
     |||||||||    
T  48062198 ctcaaaaatt 48062207  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #15
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 395 - 492
Target Start/End: Complemental strand, 3937151 - 3937054
Alignment:
Q  395 acaactatctttctcatactcacattatgtttttaatttctctctattgctttaatttttgtgtcaatatctaattttccttgtaaaattttggttgt 492  Q
    |||||| ||| ||||||||||||||||| |||||| ||| |||||||| ||||  |||||||| ||||| || |||| | || |||||||||||||||    
T  3937151 acaactttctctctcatactcacattatctttttactttatctctattactttggtttttgtgccaatacctcatttcctttataaaattttggttgt 3937054  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #16
Raw Score: 41; E-Value: 0.00000000000005
Query Start/End: Original strand, 408 - 504
Target Start/End: Original strand, 36207092 - 36207188
Alignment:
Q  408 tcatactcacattatgtttttaatttctctctattgctttaatttttgtgtcaatatctaattttccttgtaaaattttggttgtttcaaaaattgt 504  Q
    ||||||| |||||| ||||||| ||||||||||||| |||  ||||| || |||||||| |||||| ||||||| |||| |||||  ||||||||||    
T  36207092 tcatacttacattacgtttttagtttctctctattgttttggtttttctgccaatatcttattttctttgtaaattttttgttgtcccaaaaattgt 36207188  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #17
Raw Score: 41; E-Value: 0.00000000000005
Query Start/End: Original strand, 395 - 463
Target Start/End: Original strand, 38259105 - 38259173
Alignment:
Q  395 acaactatctttctcatactcacattatgtttttaatttctctctattgctttaatttttgtgtcaata 463  Q
    |||||| ||| | ||||||| |||||||||||||| ||||||||||||| ||| |||||||||||||||    
T  38259105 acaactttctctttcatactaacattatgtttttactttctctctattgttttgatttttgtgtcaata 38259173  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #18
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 405 - 473
Target Start/End: Original strand, 3683583 - 3683653
Alignment:
Q  405 ttctcatactcacattatgtttttaatttctc--tctattgctttaatttttgtgtcaatatctaattttc 473  Q
    |||||||||||||||||| |||||| ||||||  ||||||| ||||||||||||||||||| || ||||||    
T  3683583 ttctcatactcacattatatttttattttctctctctattgttttaatttttgtgtcaataacttattttc 3683653  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #19
Raw Score: 39; E-Value: 0.0000000000008
Query Start/End: Original strand, 424 - 498
Target Start/End: Original strand, 35207573 - 35207647
Alignment:
Q  424 tttttaatttctctctattgctttaatttttgtgtcaatatctaattttccttgtaaaattttggttgtttcaaa 498  Q
    |||||| ||||||||||||||||| || ||||||||||||  | |||||  |||||||||||||||||| |||||    
T  35207573 tttttattttctctctattgctttgatatttgtgtcaatacttcattttatttgtaaaattttggttgtctcaaa 35207647  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #20
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 396 - 473
Target Start/End: Original strand, 22605402 - 22605479
Alignment:
Q  396 caactatctttctcatactcacattatgtttttaatttctctctattgctttaatttttgtgtcaatatctaattttc 473  Q
    ||||||||| ||||| ||||||||| | |||||| ||||||||||||| |||  ||||||||||| ||||||| ||||    
T  22605402 caactatctctctcaaactcacattctctttttattttctctctattgttttggtttttgtgtcactatctaaatttc 22605479  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #21
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 406 - 492
Target Start/End: Complemental strand, 38956637 - 38956549
Alignment:
Q  406 tctcatactcacattatgtttttaatttctctct--attgctttaatttttgtgtcaatatctaattttccttgtaaaattttggttgt 492  Q
    ||||||||||||||||| |||||| |||||||||  ||||||||  |||||||| || || || |||| | ||||||||||||||||||    
T  38956637 tctcatactcacattatctttttactttctctctctattgctttgttttttgtgccactacctcatttcctttgtaaaattttggttgt 38956549  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #22
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 395 - 473
Target Start/End: Complemental strand, 40227196 - 40227116
Alignment:
Q  395 acaactatctttctcatactcacattatgtttt--taatttctctctattgctttaatttttgtgtcaatatctaattttc 473  Q
    |||||| ||| ||||||||||||||||||||||  || ||||||| ||||| ||| |||||| ||||||||||| ||||||    
T  40227196 acaactttctctctcatactcacattatgtttttatattttctctttattgttttgatttttatgtcaatatcttattttc 40227116  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #23
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 406 - 463
Target Start/End: Original strand, 41650760 - 41650817
Alignment:
Q  406 tctcatactcacattatgtttttaatttctctctattgctttaatttttgtgtcaata 463  Q
    ||||||||||||||| |||||||| ||||||||||||| |||  ||||||||||||||    
T  41650760 tctcatactcacattttgtttttactttctctctattgttttggtttttgtgtcaata 41650817  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #24
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 406 - 504
Target Start/End: Original strand, 43025392 - 43025492
Alignment:
Q  406 tctcatactcacattatgtttttaattt--ctctctattgctttaatttttgtgtcaatatctaattttccttgtaaaattttggttgtttcaaaaattg 503  Q
    ||||||||||| ||||| |||||| |||  ||||||||||||||  |||||||| || ||||| |||| | |||||||||||| |||||| ||||| |||    
T  43025392 tctcatactcatattatctttttactttttctctctattgctttggtttttgtgccactatctcatttcctttgtaaaattttagttgttacaaaagttg 43025491  T
Q  504 t 504  Q
    |    
T  43025492 t 43025492  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #25
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 402 - 487
Target Start/End: Complemental strand, 24614339 - 24614252
Alignment:
Q  402 tctttctcatactcacattatgtttttaatttctc--tctattgctttaatttttgtgtcaatatctaattttccttgtaaaattttg 487  Q
    |||||||||||||||||||||  ||||| ||||||  |||||||||||  ||||||||||| || || |||| | |||||||||||||    
T  24614339 tctttctcatactcacattatcattttattttctcactctattgctttggtttttgtgtcactacctcatttcctttgtaaaattttg 24614252  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #26
Raw Score: 36; E-Value: 0.00000000005
Query Start/End: Original strand, 395 - 498
Target Start/End: Complemental strand, 33578344 - 33578241
Alignment:
Q  395 acaactatctttctcatactcacattatgtttttaatttctctctattgctttaatttttgtgtcaatatctaattttccttgtaaaattttggttgttt 494  Q
    |||||| ||||| ||||| | ||||||| |||||| ||||||||||||  |||  ||||||| |||||  || |||||| |||||||||||| ||||||     
T  33578344 acaactttctttttcatatttacattatatttttactttctctctattattttggtttttgtatcaatcactcattttctttgtaaaattttagttgttg 33578245  T
Q  495 caaa 498  Q
    ||||    
T  33578244 caaa 33578241  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #27
Raw Score: 36; E-Value: 0.00000000005
Query Start/End: Original strand, 406 - 482
Target Start/End: Complemental strand, 36352603 - 36352525
Alignment:
Q  406 tctcatactcacattatgtttttaattt--ctctctattgctttaatttttgtgtcaatatctaattttccttgtaaaa 482  Q
    ||||||||| ||||||| |||||| |||  |||||||||||||| ||||| |||||||||| | |||||| ||||||||    
T  36352603 tctcatacttacattatatttttactttatctctctattgctttgattttcgtgtcaatatatgattttctttgtaaaa 36352525  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #28
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 406 - 463
Target Start/End: Complemental strand, 34108873 - 34108818
Alignment:
Q  406 tctcatactcacattatgtttttaatttctctctattgctttaatttttgtgtcaata 463  Q
    ||||||||||||||||||||||||   |||||||| |||||| |||||||||||||||    
T  34108873 tctcatactcacattatgttttta--ctctctctactgctttgatttttgtgtcaata 34108818  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #29
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 395 - 482
Target Start/End: Complemental strand, 41430181 - 41430092
Alignment:
Q  395 acaactatctttctcatactcacattatgtttttaattt--ctctctattgctttaatttttgtgtcaatatctaattttccttgtaaaa 482  Q
    |||||| ||| ||| ||||||||||||| |||||| |||  ||||||||||||||  |||| |||||||||| | |||||| ||||||||    
T  41430181 acaactttctctcttatactcacattatatttttactttatctctctattgctttggttttcgtgtcaatatatgattttctttgtaaaa 41430092  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #30
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 395 - 482
Target Start/End: Original strand, 42584844 - 42584933
Alignment:
Q  395 acaactatctttctcatactcacattatgtttttaatt--tctctctattgctttaatttttgtgtcaatatctaattttccttgtaaaa 482  Q
    |||||| ||| ||||||||||||||||| |||||| ||  ||||||||||||||| ||| | |||||||||  | |||||| ||||||||    
T  42584844 acaactttctctctcatactcacattatatttttactttatctctctattgctttgattctcgtgtcaatagatgattttctttgtaaaa 42584933  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #31
Raw Score: 34; E-Value: 0.0000000007
Query Start/End: Original strand, 395 - 461
Target Start/End: Complemental strand, 10700215 - 10700147
Alignment:
Q  395 acaactatctttctcatactcacattatgtttttaatttctctct--attgctttaatttttgtgtcaa 461  Q
    |||||| || ||||||||||||||| |||| |||| |||||||||  |||||||| |||||||||||||    
T  10700215 acaactttccttctcatactcacatcatgtctttactttctctctctattgctttgatttttgtgtcaa 10700147  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #32
Raw Score: 34; E-Value: 0.0000000007
Query Start/End: Original strand, 395 - 485
Target Start/End: Complemental strand, 12007215 - 12007123
Alignment:
Q  395 acaactatctttctcatactcacattatgtttttaatt--tctctctattgctttaatttttgtgtcaatatctaattttccttgtaaaattt 485  Q
    |||||| ||| |||||||||||||| ||  || || ||  ||||||||||||||| ||||||||| || ||||||| |||| |||||||||||    
T  12007215 acaactttctctctcatactcacatgatcattctactttctctctctattgctttgatttttgtgccactatctaaatttctttgtaaaattt 12007123  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #33
Raw Score: 34; E-Value: 0.0000000007
Query Start/End: Original strand, 406 - 460
Target Start/End: Complemental strand, 24532961 - 24532905
Alignment:
Q  406 tctcatactcacattatgtttttaatt--tctctctattgctttaatttttgtgtca 460  Q
    |||||||||||||||||||||||| ||  |||||||||||||||  |||||||||||    
T  24532961 tctcatactcacattatgtttttactttctctctctattgctttggtttttgtgtca 24532905  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #34
Raw Score: 34; E-Value: 0.0000000007
Query Start/End: Original strand, 406 - 492
Target Start/End: Complemental strand, 40854673 - 40854585
Alignment:
Q  406 tctcatactcacattatgtttttaatt--tctctctattgctttaatttttgtgtcaatatctaattttccttgtaaaattttggttgt 492  Q
    ||||||||||||||||| |||||| ||  ||||||||||||||| ||||||||| ||| |  || ||||| |||||||| | |||||||    
T  40854673 tctcatactcacattatatttttactttctctctctattgctttgatttttgtgccaacacatacttttctttgtaaaaatatggttgt 40854585  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #35
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 402 - 463
Target Start/End: Original strand, 18505822 - 18505885
Alignment:
Q  402 tctttctcatactcacattatgtttttaatt--tctctctattgctttaatttttgtgtcaata 463  Q
    ||||| |||||||||||||||||||||| ||  ||||||||||| ||| |||||||| ||||||    
T  18505822 tctttttcatactcacattatgtttttagtttctctctctattgttttgatttttgtatcaata 18505885  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #36
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 395 - 492
Target Start/End: Complemental strand, 35823004 - 35822905
Alignment:
Q  395 acaactatctttctcatactcacattatgtttttaatttctctct--attgctttaatttttgtgtcaatatctaattttccttgtaaaattttggttgt 492  Q
    |||||| ||| ||||| |||| |||||| |||||| |||||||||  |||||||| ||||||||| |||||  || ||||| |||||||| | |||||||    
T  35823004 acaactttctctctcacactcgcattatatttttactttctctctctattgctttgatttttgtgccaatacatatttttctttgtaaaaatatggttgt 35822905  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #37
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 406 - 471
Target Start/End: Complemental strand, 36703890 - 36703823
Alignment:
Q  406 tctcatactcacattatgtttttaatt--tctctctattgctttaatttttgtgtcaatatctaattt 471  Q
    ||||||||||||||||| |||||| ||  |||||||||||||||| |||  |||||| ||||||||||    
T  36703890 tctcatactcacattatttttttactttctctctctattgctttagtttccgtgtcactatctaattt 36703823  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #38
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 395 - 492
Target Start/End: Complemental strand, 44895602 - 44895503
Alignment:
Q  395 acaactatctttctcatactcacattatgtttttaatttctctct--attgctttaatttttgtgtcaatatctaattttccttgtaaaattttggttgt 492  Q
    |||||| ||| ||||||| |||| |||| |||||| |||||||||  ||||||||  |||||||| || || || |||| | ||||||||||||||||||    
T  44895602 acaactttctatctcatattcacgttatctttttactttctctctctattgctttggtttttgtgccactacctcatttcctttgtaaaattttggttgt 44895503  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #39
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 413 - 504
Target Start/End: Original strand, 12504505 - 12504596
Alignment:
Q  413 ctcacattatgtttttaatttctctctattgctttaatttttgtgtcaatatctaattttccttgtaaaattttggttgtttcaaaaattgt 504  Q
    ||||||||||||||||| |||||| || ||| ||| ||||||||| ||||| || |||||  || | || || |||||||| ||||||||||    
T  12504505 ctcacattatgtttttactttctccctgttgttttgatttttgtgccaatacctcattttaattatgaatttatggttgttacaaaaattgt 12504596  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #40
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 395 - 463
Target Start/End: Original strand, 27568059 - 27568129
Alignment:
Q  395 acaactatctttctcatactcacattatgtttttaatt--tctctctattgctttaatttttgtgtcaata 463  Q
    |||||| | ||||||||||||| |||||||||||| ||  ||||||||||| |||  ||||||||||||||    
T  27568059 acaactttatttctcatactcatattatgtttttactttctctctctattgttttggtttttgtgtcaata 27568129  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #41
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 395 - 463
Target Start/End: Original strand, 30941427 - 30941501
Alignment:
Q  395 acaactatctttctcatactcacattatgtttttaatt------tctctctattgctttaatttttgtgtcaata 463  Q
    |||||| ||| ||||||||||||||||| |||||| ||      ||||||||||||||| |||||||||||||||    
T  30941427 acaactttctctctcatactcacattatctttttactttctctctctctctattgctttgatttttgtgtcaata 30941501  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #42
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 433 - 492
Target Start/End: Original strand, 38073301 - 38073360
Alignment:
Q  433 tctctctattgctttaatttttgtgtcaatatctaattttccttgtaaaattttggttgt 492  Q
    |||||||||||||||  |||||||| ||||| || |||| | ||||||||||||||||||    
T  38073301 tctctctattgctttggtttttgtgccaatacctcatttcctttgtaaaattttggttgt 38073360  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #43
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 395 - 492
Target Start/End: Complemental strand, 41989772 - 41989671
Alignment:
Q  395 acaactatctttctcatactcacattatgtttttaatttctctc--tattgctttaatttttgtgtcaatatctaa--ttttccttgtaaaattttggtt 490  Q
    |||||| ||| ||||||||||||||||| |||||| ||||||||  |||||||||  |||||||| || || || |  ||||  ||||||||||||||||    
T  41989772 acaactttctctctcatactcacattatatttttactttctctctttattgctttggtttttgtgccactacctcattttttttttgtaaaattttggtt 41989673  T
Q  491 gt 492  Q
    ||    
T  41989672 gt 41989671  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #44
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 450 - 509
Target Start/End: Complemental strand, 46022240 - 46022181
Alignment:
Q  450 tttttgtgtcaatatctaattttccttgtaaaattttggttgtttcaaaaattgtaatat 509  Q
    |||||||||||||| || |||||| || ||||||||||||||| |||||| |||| ||||    
T  46022240 tttttgtgtcaatacctcattttctttataaaattttggttgtctcaaaagttgtcatat 46022181  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #45
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 395 - 479
Target Start/End: Original strand, 47448868 - 47448954
Alignment:
Q  395 acaactatctttctcatactcacattatgtttttaatttc--tctctattgctttaatttttgtgtcaatatctaattttccttgta 479  Q
    |||||| ||| ||||||||||||||| |||||||| ||||  |||||||||||||  |||||||| || || |||| |||| |||||    
T  47448868 acaactttctctctcatactcacattgtgtttttactttctttctctattgctttggtttttgtgccactacctaaatttctttgta 47448954  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #46
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 410 - 456
Target Start/End: Complemental strand, 44651243 - 44651197
Alignment:
Q  410 atactcacattatgtttttaatttctctctattgctttaatttttgt 456  Q
    ||||| ||||||| |||||| |||||||||||| |||||||||||||    
T  44651243 atacttacattatatttttactttctctctattactttaatttttgt 44651197  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #47
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 397 - 492
Target Start/End: Original strand, 48145568 - 48145665
Alignment:
Q  397 aactatctttctcatactcacattatgtttttaatt--tctctctattgctttaatttttgtgtcaatatctaattttccttgtaaaattttggttgt 492  Q
    |||| |||| |||||||||||||||| |||||| ||  |||||||||| |||| || |||||| |||||  || ||||| |||||||| | |||||||    
T  48145568 aactttcttgctcatactcacattatatttttactttctctctctattactttgatatttgtgccaatacatacttttctttgtaaaaatatggttgt 48145665  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #48
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 395 - 492
Target Start/End: Complemental strand, 1471320 - 1471221
Alignment:
Q  395 acaactatctttctcatactcacattatgtttttaattt--ctctctattgctttaatttttgtgtcaatatctaatt-ttccttgtaaaattttggttg 491  Q
    |||||| ||| |||||||||||||| ||||||||| |||  |||||||||||||| ||||| ||| ||| ||||| || ||| ||||||| || ||||||    
T  1471320 acaactttctctctcatactcacat-atgtttttactttatctctctattgctttgattttcgtgccaaaatctacttcttctttgtaaatttatggttg 1471222  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #49
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 431 - 492
Target Start/End: Complemental strand, 25192909 - 25192848
Alignment:
Q  431 tttctctctattgctttaatttttgtgtcaatatctaattttccttgtaaaattttggttgt 492  Q
    ||||||||||||| |||  ||||||||||| || || |||||| |||||||||||| |||||    
T  25192909 tttctctctattgttttggtttttgtgtcactacctcattttctttgtaaaattttagttgt 25192848  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #50
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 397 - 490
Target Start/End: Original strand, 25887906 - 25887999
Alignment:
Q  397 aactatctttctcatactcacattatgtttttaatttctctctattgctttaatttttgtgtcaatatctaattttccttgtaaaattttggtt 490  Q
    |||| ||||| ||| ||| |||||||||||||| ||||| ||||||| |||  ||| | |||||||||||| ||||| || |||| || |||||    
T  25887906 aactttctttttcacactaacattatgtttttattttctatctattgttttggtttctatgtcaatatctatttttctttttaaatttatggtt 25887999  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #51
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 395 - 504
Target Start/End: Complemental strand, 32529884 - 32529775
Alignment:
Q  395 acaactatctttctcatactcacattatgtttttaatttctctctattgctttaatttttgtgtcaatatctaattttccttgtaaaattttggttgttt 494  Q
    |||||| ||| ||||||| ||| || || |||||| ||||||| |||||||||  ||||| | ||| || || |||| | ||||||||||||| ||||      
T  32529884 acaactttctctctcatattcagatgatctttttactttctctttattgctttggtttttttatcactacctcatttcctttgtaaaattttgattgtca 32529785  T
Q  495 caaaaattgt 504  Q
    ||||||||||    
T  32529784 caaaaattgt 32529775  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #52
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 409 - 463
Target Start/End: Complemental strand, 34507221 - 34507165
Alignment:
Q  409 catactcacattatgtttttaatttctctct--attgctttaatttttgtgtcaata 463  Q
    |||||||||||||| |||||| |||||||||  |||||||| ||||| |||||||||    
T  34507221 catactcacattatatttttactttctctctctattgctttgattttcgtgtcaata 34507165  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #53
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 395 - 485
Target Start/End: Original strand, 34978338 - 34978430
Alignment:
Q  395 acaactatctttctcatactcacattatgtttttaatt--tctctctattgctttaatttttgtgtcaatatctaattttccttgtaaaattt 485  Q
    |||||| ||| |||||||||||||||||  ||||| ||  |||||||||||||||  |||||||| || || |||| |||| ||||| |||||    
T  34978338 acaactttctctctcatactcacattatccttttactttctctctctattgctttgttttttgtgccactacctaaatttctttgtataattt 34978430  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #54
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 395 - 440
Target Start/End: Original strand, 37969972 - 37970017
Alignment:
Q  395 acaactatctttctcatactcacattatgtttttaatttctctcta 440  Q
    |||||| ||| |||||||||||||||||||||||| | ||||||||    
T  37969972 acaactttctctctcatactcacattatgtttttattctctctcta 37970017  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #55
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 406 - 439
Target Start/End: Original strand, 39029911 - 39029944
Alignment:
Q  406 tctcatactcacattatgtttttaatttctctct 439  Q
    |||||||||||||||||||||||||||| |||||    
T  39029911 tctcatactcacattatgtttttaatttatctct 39029944  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #56
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 395 - 481
Target Start/End: Original strand, 41018705 - 41018793
Alignment:
Q  395 acaactatctttctcatactcacattatgtttttaatt--tctctctattgctttaatttttgtgtcaatatctaattttccttgtaaa 481  Q
    |||||| ||| ||||||||||||||||| |||||| ||  |||||||||| ||||  ||||||||| |||| ||  ||||| |||||||    
T  41018705 acaactttctatctcatactcacattatatttttactttctctctctattactttggtttttgtgttaatacctctttttctttgtaaa 41018793  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #57
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 395 - 440
Target Start/End: Complemental strand, 41458930 - 41458885
Alignment:
Q  395 acaactatctttctcatactcacattatgtttttaatttctctcta 440  Q
    |||||| ||| |||||||||||||||||||||||| | ||||||||    
T  41458930 acaactttctctctcatactcacattatgtttttattctctctcta 41458885  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #58
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 406 - 499
Target Start/End: Original strand, 42552952 - 42553045
Alignment:
Q  406 tctcatactcacattatgtttttaatttctctctattgctttaatttttgtgtcaatatctaattttccttgtaaaattttggttgtttcaaaa 499  Q
    ||||||| ||| |||||||||||| | ||||||| ||| |||  |||||||| ||||| ||  ||||| |||||||||| ||||| | ||||||    
T  42552952 tctcatattcatattatgtttttactctctctctgttgttttggtttttgtgccaatacctctttttctttgtaaaattatggttttctcaaaa 42553045  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #59
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 406 - 443
Target Start/End: Original strand, 47379628 - 47379665
Alignment:
Q  406 tctcatactcacattatgtttttaatttctctctattg 443  Q
    |||||||||||||||||||||||| | |||||||||||    
T  47379628 tctcatactcacattatgtttttagtctctctctattg 47379665  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #60
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 395 - 439
Target Start/End: Complemental strand, 156011 - 155967
Alignment:
Q  395 acaactatctttctcatactcacattatgtttttaatttctctct 439  Q
    |||||| ||| |||||||||||||||||||||||| | |||||||    
T  156011 acaactttctctctcatactcacattatgtttttattctctctct 155967  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #61
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 408 - 509
Target Start/End: Original strand, 17002391 - 17002493
Alignment:
Q  408 tcatactcacattatgtttttaatttctc--tctattgctttaatttttgtgtcaatatctaattttccttgtaaaattttggttgtttcaaaaattgta 505  Q
    ||||||||||||||| ||||||  |||||  |||||| ||||  |||||||||||||  || |||||| || ||||| |||||||||| |||| |||||     
T  17002391 tcatactcacattatatttttaccttctctttctattactttggtttttgtgtcaatcactcattttctttataaaa-tttggttgttgcaaagattgtc 17002489  T
Q  506 atat 509  Q
    ||||    
T  17002490 atat 17002493  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #62
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 395 - 439
Target Start/End: Complemental strand, 28548251 - 28548207
Alignment:
Q  395 acaactatctttctcatactcacattatgtttttaatttctctct 439  Q
    |||||| ||| |||||||||||||||||||||||| | |||||||    
T  28548251 acaactttctctctcatactcacattatgtttttattctctctct 28548207  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #63
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 433 - 485
Target Start/End: Complemental strand, 29723914 - 29723862
Alignment:
Q  433 tctctctattgctttaatttttgtgtcaatatctaattttccttgtaaaattt 485  Q
    ||||||||||||||| ||||||||  || ||||||| |||| |||||||||||    
T  29723914 tctctctattgctttgatttttgtaccactatctaaatttctttgtaaaattt 29723862  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #64
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 395 - 456
Target Start/End: Original strand, 43942678 - 43942741
Alignment:
Q  395 acaactatctttctcatactcacattatgtttttaatttctc--tctattgctttaatttttgt 456  Q
    |||||| ||| ||||||||||||||||| |||||| ||||||  |||||||||||  |||||||    
T  43942678 acaactttctctctcatactcacattatctttttactttctctctctattgctttggtttttgt 43942741  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #65
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 395 - 492
Target Start/End: Complemental strand, 44496832 - 44496733
Alignment:
Q  395 acaactatctttctcatactcacattatgtttttaatttctct--ctattgctttaatttttgtgtcaatatctaattttccttgtaaaattttggttgt 492  Q
    |||||| ||| ||||||||||||||||| || ||| |||||||  |||||  ||| || |||||| |||||  |||||||| |||||||| | |||||||    
T  44496832 acaactttctctctcatactcacattatattattattttctcttgctattattttgatatttgtgccaatacataattttctttgtaaaaatatggttgt 44496733  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6 (Bit Score: 63; Significance: 4e-27; HSPs: 38)
Name: chr6
Description:

Target: chr6; HSP #1
Raw Score: 63; E-Value: 4e-27
Query Start/End: Original strand, 406 - 509
Target Start/End: Original strand, 26595401 - 26595506
Alignment:
Q  406 tctcatactcacattatgtttttaatttctc--tctattgctttaatttttgtgtcaatatctaattttccttgtaaaattttggttgtttcaaaaattg 503  Q
    |||||||||||||||||||||||| ||||||  |||||||||||  |||||||||||||| || |||||| ||||||||||||||||||||||||| |||    
T  26595401 tctcatactcacattatgtttttactttctctctctattgctttggtttttgtgtcaatacctcattttctttgtaaaattttggttgtttcaaaagttg 26595500  T
Q  504 taatat 509  Q
    | ||||    
T  26595501 tcatat 26595506  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #2
Raw Score: 53; E-Value: 3e-21
Query Start/End: Original strand, 419 - 504
Target Start/End: Original strand, 277056 - 277143
Alignment:
Q  419 ttatgtttttaattt--ctctctattgctttaatttttgtgtcaatatctaattttccttgtaaaattttggttgtttcaaaaattgt 504  Q
    |||||||||||||||  |||||||||||||| |||||||||||||||| | |||||| ||||||||||||||||||  ||||||||||    
T  277056 ttatgtttttaatttttctctctattgctttgatttttgtgtcaatatatcattttctttgtaaaattttggttgtcacaaaaattgt 277143  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #3
Raw Score: 49; E-Value: 8e-19
Query Start/End: Original strand, 395 - 492
Target Start/End: Complemental strand, 22079593 - 22079494
Alignment:
Q  395 acaactatctttctcatactcacattatgtttttaatttctctct--attgctttaatttttgtgtcaatatctaattttccttgtaaaattttggttgt 492  Q
    |||||| ||| ||||| |||||||||||||||||| |||||||||  |||||||| |||||||||||||||  | |||||| ||| ||||||||||||||    
T  22079593 acaactttctctctcacactcacattatgtttttactttctctctctattgctttgatttttgtgtcaatacatcattttctttgcaaaattttggttgt 22079494  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #4
Raw Score: 48; E-Value: 3e-18
Query Start/End: Original strand, 397 - 509
Target Start/End: Complemental strand, 3853335 - 3853221
Alignment:
Q  397 aactatctttctcatactcacattatgtttttaatttctctct--attgctttaatttttgtgtcaatatctaattttccttgtaaaattttggttgttt 494  Q
    |||| ||| ||||||| |||| ||||||||| | |||||||||  |||||||| |||||||||||||||||| |||||| ||||||||| || ||||| |    
T  3853335 aactttctctctcataatcaccttatgttttaactttctctctctattgctttgatttttgtgtcaatatctcattttctttgtaaaatctttgttgtct 3853236  T
Q  495 caaaaattgtaatat 509  Q
    ||||| |||| ||||    
T  3853235 caaaagttgtcatat 3853221  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #5
Raw Score: 48; E-Value: 3e-18
Query Start/End: Original strand, 404 - 504
Target Start/End: Complemental strand, 5694172 - 5694070
Alignment:
Q  404 tttctcatactcacattatgtttttaattt--ctctctattgctttaatttttgtgtcaatatctaattttccttgtaaaattttggttgtttcaaaaat 501  Q
    ||||||||| |||||||||||||||| |||  |||||||||| ||| ||||||||||||||| || |||| | ||||||||||| |||||| |||||| |    
T  5694172 tttctcatattcacattatgtttttactttttctctctattgttttgatttttgtgtcaatacctcatttcctttgtaaaatttaggttgtctcaaaagt 5694073  T
Q  502 tgt 504  Q
    |||    
T  5694072 tgt 5694070  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #6
Raw Score: 45; E-Value: 2e-16
Query Start/End: Original strand, 395 - 492
Target Start/End: Original strand, 34047428 - 34047527
Alignment:
Q  395 acaactatctttctcatactcacattatgtttttaattt--ctctctattgctttaatttttgtgtcaatatctaattttccttgtaaaattttggttgt 492  Q
    |||||| ||| ||||||||||||||||| ||||||  ||  ||||||||||||||  |||||||| ||||||||  ||||| ||||||||||||||||||    
T  34047428 acaactttctctctcatactcacattatctttttatcttatctctctattgctttggtttttgtgccaatatctctttttctttgtaaaattttggttgt 34047527  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #7
Raw Score: 44; E-Value: 8e-16
Query Start/End: Original strand, 408 - 492
Target Start/End: Complemental strand, 32316945 - 32316859
Alignment:
Q  408 tcatactcacattatgtttttaattt--ctctctattgctttaatttttgtgtcaatatctaattttccttgtaaaattttggttgt 492  Q
    ||||||||||||||| |||||| |||  ||||||||||||||  ||||||||||| || || |||||| ||||||||||||||||||    
T  32316945 tcatactcacattatctttttactttatctctctattgctttggtttttgtgtcagtacctcattttctttgtaaaattttggttgt 32316859  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #8
Raw Score: 43; E-Value: 0.000000000000003
Query Start/End: Original strand, 395 - 490
Target Start/End: Complemental strand, 5080597 - 5080500
Alignment:
Q  395 acaactatctttctcatactcacattatgtttttaatttctctct--attgctttaatttttgtgtcaatatctaattttccttgtaaaattttggtt 490  Q
    |||||| ||| | ||||||||||||||| |||||| |||||||||  ||||||||| ||||||||||| || || |||| | ||||||||||||||||    
T  5080597 acaactttctctttcatactcacattatttttttactttctctctctattgctttagtttttgtgtcactacctcatttcctttgtaaaattttggtt 5080500  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #9
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 406 - 504
Target Start/End: Complemental strand, 31883322 - 31883222
Alignment:
Q  406 tctcatactcacattatgtttttaatttctctct--attgctttaatttttgtgtcaatatctaattttccttgtaaaattttggttgtttcaaaaattg 503  Q
    |||||||||||||| |||| |||| |||||||||  |||||||| ||||||||||||| | ||  ||||| |||||||||| |||||||  |||||||||    
T  31883322 tctcatactcacatcatgtatttactttctctctctattgctttgatttttgtgtcaagacctctttttctttgtaaaattatggttgtcccaaaaattg 31883223  T
Q  504 t 504  Q
    |    
T  31883222 t 31883222  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #10
Raw Score: 41; E-Value: 0.00000000000005
Query Start/End: Original strand, 431 - 499
Target Start/End: Original strand, 4820446 - 4820514
Alignment:
Q  431 tttctctctattgctttaatttttgtgtcaatatctaattttccttgtaaaattttggttgtttcaaaa 499  Q
    ||||||||||||||||| ||||||||||||||  || |||||| ||||||||||||| |||| ||||||    
T  4820446 tttctctctattgctttgatttttgtgtcaatgcctcattttctttgtaaaattttgattgtctcaaaa 4820514  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #11
Raw Score: 41; E-Value: 0.00000000000005
Query Start/End: Original strand, 410 - 487
Target Start/End: Original strand, 11612244 - 11612323
Alignment:
Q  410 atactcacattatgtttttaatttct--ctctattgctttaatttttgtgtcaatatctaattttccttgtaaaattttg 487  Q
    ||||||||||||| |||||| |||||  ||||||||||||||||||||||  |||| || |||||| |||||||||||||    
T  11612244 atactcacattatctttttactttctttctctattgctttaatttttgtgcaaatacctcattttctttgtaaaattttg 11612323  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #12
Raw Score: 39; E-Value: 0.0000000000008
Query Start/End: Original strand, 395 - 492
Target Start/End: Complemental strand, 2242051 - 2241956
Alignment:
Q  395 acaactatctttctcatactcacattatgtttttaatttctctctattgctttaatttttgtgtcaatatctaattttccttgtaaaattttggttgt 492  Q
    |||||| ||| |||||||||||||||| |||||||  || |||||||||||||  |||||||||||||  || |||||| |||||  |||||||||||    
T  2242051 acaactttctctctcatactcacattaagttttta--ttttctctattgctttggtttttgtgtcaatgcctcattttctttgtattattttggttgt 2241956  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #13
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 395 - 492
Target Start/End: Complemental strand, 17551408 - 17551310
Alignment:
Q  395 acaactatctttctcatactcacattatgtttttaatt--tctctctattgctttaatttttgtgtcaatatctaattttccttgtaaaattttggttgt 492  Q
    |||||| ||| |||||||||||||||||||||||| ||  ||||||||||| |||  |||||||||||||  || |||||| || | |||||||||||||    
T  17551408 acaactttctctctcatactcacattatgtttttactttatctctctattgttttggtttttgtgtcaatccctcattttctttat-aaattttggttgt 17551310  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #14
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 397 - 492
Target Start/End: Complemental strand, 13690022 - 13689925
Alignment:
Q  397 aactatctttctcatactcacattatgtttttaatttct--ctctattgctttaatttttgtgtcaatatctaattttccttgtaaaattttggttgt 492  Q
    |||| ||||||||||||| | ||||| |||||| ||| |  |||||||||||| ||||||||||||||| || |||| | || ||||||||| |||||    
T  13690022 aactttctttctcatacttagattatttttttactttttttctctattgctttgatttttgtgtcaatacctcatttcctttataaaattttagttgt 13689925  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #15
Raw Score: 34; E-Value: 0.0000000007
Query Start/End: Original strand, 406 - 492
Target Start/End: Original strand, 552845 - 552933
Alignment:
Q  406 tctcatactcacattatgtttttaatttctc--tctattgctttaatttttgtgtcaatatctaattttccttgtaaaattttggttgt 492  Q
    ||||||| ||||||||| |||||| ||||||  |||||||||||  |||||||| || || || |||| | ||||||||||||||||||    
T  552845 tctcatattcacattatctttttactttctctctctattgctttggtttttgtgccactacctcatttcctttgtaaaattttggttgt 552933  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #16
Raw Score: 34; E-Value: 0.0000000007
Query Start/End: Original strand, 406 - 492
Target Start/End: Complemental strand, 8098616 - 8098528
Alignment:
Q  406 tctcatactcacattatgtttttaatttctctct--attgctttaatttttgtgtcaatatctaattttccttgtaaaattttggttgt 492  Q
    ||||||||||||||| | |||||| |||||||||  ||||||||  ||||||||||| || || |||| | || |||||||||||||||    
T  8098616 tctcatactcacattttctttttactttctctctctattgctttggtttttgtgtcactaccttatttcctttctaaaattttggttgt 8098528  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #17
Raw Score: 34; E-Value: 0.0000000007
Query Start/End: Original strand, 406 - 492
Target Start/End: Complemental strand, 18737586 - 18737498
Alignment:
Q  406 tctcatactcacattatgtttttaatttctctct--attgctttaatttttgtgtcaatatctaattttccttgtaaaattttggttgt 492  Q
    |||||||||  |||||| |||||| |||||||||  |||| |||  |||||||| ||||| || |||||| ||||||||||||||||||    
T  18737586 tctcatacttgcattatctttttactttctctctttattgttttggtttttgtgacaatacctcattttctttgtaaaattttggttgt 18737498  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #18
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 395 - 492
Target Start/End: Original strand, 15974649 - 15974748
Alignment:
Q  395 acaactatctttctcatactcacattatgtttttaatttctc--tctattgctttaatttttgtgtcaatatctaattttccttgtaaaattttggttgt 492  Q
    |||||| ||| ||||||| ||||||||| |||||| ||||||  |||||||||||  ||||||||| | ||  | |||| | ||||||||||||||||||    
T  15974649 acaactttctctctcatattcacattatctttttattttctctctctattgctttggtttttgtgttactacttcatttcctttgtaaaattttggttgt 15974748  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #19
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 439 - 487
Target Start/End: Complemental strand, 33603264 - 33603216
Alignment:
Q  439 tattgctttaatttttgtgtcaatatctaattttccttgtaaaattttg 487  Q
    ||||||||| ||||||||||||||| || |||||| |||||||||||||    
T  33603264 tattgctttgatttttgtgtcaatacctcattttctttgtaaaattttg 33603216  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #20
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 406 - 457
Target Start/End: Complemental strand, 2060652 - 2060601
Alignment:
Q  406 tctcatactcacattatgtttttaatttctctctattgctttaatttttgtg 457  Q
    ||||||||||||||||| ||||||  ||||||||||||||||  ||||||||    
T  2060652 tctcatactcacattatatttttaccttctctctattgctttggtttttgtg 2060601  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #21
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 410 - 481
Target Start/End: Complemental strand, 3552168 - 3552097
Alignment:
Q  410 atactcacattatgtttttaatttctctctattgctttaatttttgtgtcaatatctaattttccttgtaaa 481  Q
    ||||||||||||| |||||| ||||||||| || ||||  || ||||||||||| || |||||| |||||||    
T  3552168 atactcacattatatttttactttctctctgttactttgcttattgtgtcaataccttattttctttgtaaa 3552097  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #22
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 450 - 509
Target Start/End: Original strand, 16199548 - 16199607
Alignment:
Q  450 tttttgtgtcaatatctaattttccttgtaaaattttggttgtttcaaaaattgtaatat 509  Q
    |||||||||||||| || |||||| || ||||||||||||||| |||||| |||| ||||    
T  16199548 tttttgtgtcaatacctcattttctttataaaattttggttgtctcaaaagttgtcatat 16199607  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #23
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 395 - 438
Target Start/End: Complemental strand, 16368076 - 16368033
Alignment:
Q  395 acaactatctttctcatactcacattatgtttttaatttctctc 438  Q
    |||||| ||||||||||||||||||||| |||||| ||||||||    
T  16368076 acaactttctttctcatactcacattatatttttactttctctc 16368033  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #24
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 406 - 504
Target Start/End: Complemental strand, 5522656 - 5522558
Alignment:
Q  406 tctcatactcacattatgtttttaatttctctctattgctttaatttttgtgtcaatatctaattttccttgtaaaattttggttgtttcaaaaattgt 504  Q
    ||||||| |||||||||  ||||| |||||||||||||||||  ||||||||  |||| ||| ||| | || |||| || |||||||| ||||| ||||    
T  5522656 tctcatattcacattatacttttactttctctctattgctttggtttttgtgctaatacctactttcctttataaatttatggttgttccaaaagttgt 5522558  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #25
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 395 - 482
Target Start/End: Original strand, 13423010 - 13423099
Alignment:
Q  395 acaactatctttctcatactcacattatgtttttaatt--tctctctattgctttaatttttgtgtcaatatctaattttccttgtaaaa 482  Q
    |||||| ||| ||||||||||||||||| |||||| ||  ||||||||||  |||| |||||||| |||||  || ||||| ||||||||    
T  13423010 acaactttctctctcatactcacattatatttttactttctctctctattattttagtttttgtgccaatacatatttttctttgtaaaa 13423099  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #26
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 397 - 492
Target Start/End: Complemental strand, 25127860 - 25127761
Alignment:
Q  397 aactatctttctcatactcacattatgtttttaatt----tctctctattgctttaatttttgtgtcaatatctaattttccttgtaaaattttggttgt 492  Q
    |||| ||| ||| |||||||||||||||||||| ||    |||||||||||||||  |||  ||||||||| ||| ||||| ||||||| || |||||||    
T  25127860 aactttctctctgatactcacattatgtttttactttctctctctctattgctttggtttccgtgtcaatacctacttttctttgtaaatttatggttgt 25127761  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #27
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 406 - 481
Target Start/End: Original strand, 30945866 - 30945943
Alignment:
Q  406 tctcatactcacattatgtttttaatt--tctctctattgctttaatttttgtgtcaatatctaattttccttgtaaa 481  Q
    |||||||||||||||||| ||||| ||  ||| ||||||| ||| ||||| ||| ||||||||| ||||| |||||||    
T  30945866 tctcatactcacattatgattttactttatctatctattgatttgattttcgtgccaatatctacttttctttgtaaa 30945943  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #28
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 395 - 473
Target Start/End: Complemental strand, 5739793 - 5739713
Alignment:
Q  395 acaactatctttctcatactcacattatgtttttaatttctct--ctattgctttaatttttgtgtcaatatctaattttc 473  Q
    |||||| ||||||| ||||||| ||| |  || ||||||||||  |||||||||| |||||||||||| || |||||||||    
T  5739793 acaactttctttcttatactcatattgtccttctaatttctctttctattgctttgatttttgtgtcactacctaattttc 5739713  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #29
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 404 - 466
Target Start/End: Original strand, 6271400 - 6271464
Alignment:
Q  404 tttctcatactcacattatgtttttaatt--tctctctattgctttaatttttgtgtcaatatct 466  Q
    ||||| ||||| |||||||||||||| ||  ||||||||||| |||  |||||||||||||||||    
T  6271400 tttcttatacttacattatgtttttactttctctctctattgttttggtttttgtgtcaatatct 6271464  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #30
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 395 - 485
Target Start/End: Original strand, 8645350 - 8645442
Alignment:
Q  395 acaactatctttctcatactcacattatgtttttaatt--tctctctattgctttaatttttgtgtcaatatctaattttccttgtaaaattt 485  Q
    |||||| ||| |||||||||||||||||  ||||| ||  ||||||||||||||| |||| || |||| || |||| |||| ||||| |||||    
T  8645350 acaactttctctctcatactcacattatccttttactttctctctctattgctttgatttatgcgtcactacctaaatttctttgtataattt 8645442  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #31
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 395 - 481
Target Start/End: Complemental strand, 17181965 - 17181877
Alignment:
Q  395 acaactatctttctcatactcacatt--atgtttttaatttctctctattgctttaatttttgtgtcaatatctaattttccttgtaaa 481  Q
    |||||| ||| |||||||||||||||  || |||||| |||  ||||||||||||| ||||| |||||||| ||  ||||| |||||||    
T  17181965 acaactttctatctcatactcacattttatatttttactttaactctattgctttagtttttatgtcaatacctctttttcattgtaaa 17181877  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #32
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 408 - 486
Target Start/End: Original strand, 24900828 - 24900908
Alignment:
Q  408 tcatactcacattatgtttttaatttctc--tctattgctttaatttttgtgtcaatatctaattttccttgtaaaatttt 486  Q
    ||||| ||||||||| |||||| ||||||  |||||||||||  |||||||| ||||  || |||||| ||||||||||||    
T  24900828 tcatattcacattatatttttactttctctctctattgctttggtttttgtgccaatcactcattttctttgtaaaatttt 24900908  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #33
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 395 - 457
Target Start/End: Complemental strand, 25811868 - 25811804
Alignment:
Q  395 acaactatctttctcatactcacattatgtttttaatt--tctctctattgctttaatttttgtg 457  Q
    |||||| ||| ||||||||||||||||| |||||| ||  |||||||||||||||  ||||||||    
T  25811868 acaactttctctctcatactcacattatctttttactttctctctctattgctttggtttttgtg 25811804  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #34
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 395 - 492
Target Start/End: Original strand, 1376406 - 1376507
Alignment:
Q  395 acaactatctttctcatactcacattatgtttttaattt----ctctctattgctttaatttttgtgtcaatatctaattttccttgtaaaattttggtt 490  Q
    |||||| ||| ||| ||||||||||||| |||||| |||    ||||||||| |||| || ||||||||||||  || ||||| |||||||| | |||||    
T  1376406 acaactttctctcttatactcacattatatttttactttatctctctctattacttttatatttgtgtcaatacatatttttctttgtaaaaatgtggtt 1376505  T
Q  491 gt 492  Q
    ||    
T  1376506 gt 1376507  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #35
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 395 - 492
Target Start/End: Original strand, 1384154 - 1384255
Alignment:
Q  395 acaactatctttctcatactcacattatgtttttaattt----ctctctattgctttaatttttgtgtcaatatctaattttccttgtaaaattttggtt 490  Q
    |||||| ||| ||| ||||||||||||| |||||| |||    ||||||||| |||| || ||||||||||||  || ||||| |||||||| | |||||    
T  1384154 acaactttctctcttatactcacattatatttttactttatctctctctattacttttatatttgtgtcaatacatatttttctttgtaaaaatgtggtt 1384253  T
Q  491 gt 492  Q
    ||    
T  1384254 gt 1384255  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #36
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 439 - 499
Target Start/End: Complemental strand, 11014974 - 11014914
Alignment:
Q  439 tattgctttaatttttgtgtcaatatctaattttccttgtaaaattttggttgtttcaaaa 499  Q
    ||||| ||||||||||||||||||| || |||||| |  |||||||||| |||| ||||||    
T  11014974 tattgatttaatttttgtgtcaatacctcattttcttcataaaattttgattgtctcaaaa 11014914  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #37
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 433 - 485
Target Start/End: Original strand, 14910258 - 14910310
Alignment:
Q  433 tctctctattgctttaatttttgtgtcaatatctaattttccttgtaaaattt 485  Q
    ||||||||||||||| |||||||||||| || |||| |||| ||||| |||||    
T  14910258 tctctctattgctttgatttttgtgtcactacctaaatttctttgtataattt 14910310  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #38
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 395 - 439
Target Start/End: Complemental strand, 23653923 - 23653879
Alignment:
Q  395 acaactatctttctcatactcacattatgtttttaatttctctct 439  Q
    |||||| ||| ||||||||||||||||| |||||| |||||||||    
T  23653923 acaactttctctctcatactcacattatatttttactttctctct 23653879  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8 (Bit Score: 61; Significance: 6e-26; HSPs: 67)
Name: chr8
Description:

Target: chr8; HSP #1
Raw Score: 61; E-Value: 6e-26
Query Start/End: Original strand, 402 - 486
Target Start/End: Complemental strand, 27854789 - 27854705
Alignment:
Q  402 tctttctcatactcacattatgtttttaatttctctctattgctttaatttttgtgtcaatatctaattttccttgtaaaatttt 486  Q
    |||||||||||||||||||||||||||| ||||||||||||| ||| ||||||||| |||||| |||||||| ||||||||||||    
T  27854789 tctttctcatactcacattatgtttttactttctctctattgttttgatttttgtgccaatatttaattttctttgtaaaatttt 27854705  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #2
Raw Score: 52; E-Value: 1e-20
Query Start/End: Original strand, 406 - 502
Target Start/End: Complemental strand, 10839501 - 10839403
Alignment:
Q  406 tctcatactcacattatgtttttaatttctct--ctattgctttaatttttgtgtcaatatctaattttccttgtaaaattttggttgtttcaaaaatt 502  Q
    ||||||||| |||||||||||||| |||||||  ||||||||||  |||||||| |||||| |||||||| |||||||||||| ||||| |||||||||    
T  10839501 tctcatacttacattatgtttttactttctctatctattgctttggtttttgtgccaatatttaattttctttgtaaaattttagttgtctcaaaaatt 10839403  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #3
Raw Score: 50; E-Value: 2e-19
Query Start/End: Original strand, 406 - 492
Target Start/End: Complemental strand, 37133881 - 37133793
Alignment:
Q  406 tctcatactcacattatgtttttaatttctct--ctattgctttaatttttgtgtcaatatctaattttccttgtaaaattttggttgt 492  Q
    ||||| ||||| |||||||||||| |||||||  |||||||||| |||||||||||||||| | |||||| ||||||||||||||||||    
T  37133881 tctcacactcatattatgtttttactttctctttctattgctttgatttttgtgtcaatatatcattttctttgtaaaattttggttgt 37133793  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #4
Raw Score: 46; E-Value: 5e-17
Query Start/End: Original strand, 395 - 489
Target Start/End: Complemental strand, 11253572 - 11253476
Alignment:
Q  395 acaactatctttctcatactcacattatgtttttaatttctctct--attgctttaatttttgtgtcaatatctaattttccttgtaaaattttggt 489  Q
    |||||| ||| ||||||||| ||||||| |||||| |||||||||  ||||||||  |||||||||||||| || |||||| |||||||||||||||    
T  11253572 acaactttctctctcatacttacattatctttttattttctctctctattgctttggtttttgtgtcaatacctcattttctttgtaaaattttggt 11253476  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #5
Raw Score: 46; E-Value: 5e-17
Query Start/End: Original strand, 395 - 485
Target Start/End: Original strand, 26026938 - 26027030
Alignment:
Q  395 acaactatctttctcatactcacattatgtttttaatttctct--ctattgctttaatttttgtgtcaatatctaattttccttgtaaaattt 485  Q
    |||||| |||||||||||||||||||||  ||||| |||||||  ||||||||||||||||||| ||| ||||||| |||| ||||| |||||    
T  26026938 acaactttctttctcatactcacattatcattttattttctctttctattgctttaatttttgtatcactatctaaatttctttgtataattt 26027030  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #6
Raw Score: 46; E-Value: 5e-17
Query Start/End: Original strand, 402 - 492
Target Start/End: Original strand, 40517306 - 40517398
Alignment:
Q  402 tctttctcatactcacattatgtttttaatttctct--ctattgctttaatttttgtgtcaatatctaattttccttgtaaaattttggttgt 492  Q
    ||||||||||||||| |||||||||||| ||| |||  |||||||||| ||||| ||||||||||||| ||||| ||||||| || |||||||    
T  40517306 tctttctcatactcatattatgtttttattttatctttctattgctttgattttcgtgtcaatatctacttttctttgtaaatttatggttgt 40517398  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #7
Raw Score: 45; E-Value: 2e-16
Query Start/End: Original strand, 406 - 502
Target Start/End: Original strand, 42768258 - 42768354
Alignment:
Q  406 tctcatactcacattatgtttttaatttctctctattgctttaatttttgtgtcaatatctaattttccttgtaaaattttggttgtttcaaaaatt 502  Q
    ||||||||||||||||| |||||| |||||||||||||||||  ||||||||||| |  || |||| | |||||||||||| |||||  ||||||||    
T  42768258 tctcatactcacattatttttttactttctctctattgctttggtttttgtgtcactgcctcatttcctttgtaaaattttagttgtcacaaaaatt 42768354  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #8
Raw Score: 45; E-Value: 2e-16
Query Start/End: Original strand, 395 - 492
Target Start/End: Original strand, 43397822 - 43397921
Alignment:
Q  395 acaactatctttctcatactcacattatgtttttaatttctct--ctattgctttaatttttgtgtcaatatctaattttccttgtaaaattttggttgt 492  Q
    |||||| ||| ||||||||||||||||| |||||| |||||||  ||||| ||||  |||||||| || ||||| |||||| ||||||||||||||||||    
T  43397822 acaactttctctctcatactcacattatttttttactttctctttctattactttggtttttgtgccactatctcattttctttgtaaaattttggttgt 43397921  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #9
Raw Score: 44; E-Value: 8e-16
Query Start/End: Original strand, 395 - 482
Target Start/End: Complemental strand, 33100498 - 33100411
Alignment:
Q  395 acaactatctttctcatactcacattatgtttttaatttctctctattgctttaatttttgtgtcaatatctaattttccttgtaaaa 482  Q
    |||||| ||| ||||||||||||||||  |||||| |||||||||||| |||| |||||||||||||||  || ||||| ||||||||    
T  33100498 acaactttctctctcatactcacattacatttttattttctctctattactttgatttttgtgtcaatacatacttttctttgtaaaa 33100411  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #10
Raw Score: 44; E-Value: 8e-16
Query Start/End: Original strand, 418 - 481
Target Start/End: Original strand, 34694846 - 34694909
Alignment:
Q  418 attatgtttttaatttctctctattgctttaatttttgtgtcaatatctaattttccttgtaaa 481  Q
    |||||||||||||||||||||||||||||| |||||  |||||||| ||||||||| |||||||    
T  34694846 attatgtttttaatttctctctattgctttgattttcatgtcaatacctaattttctttgtaaa 34694909  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #11
Raw Score: 43; E-Value: 0.000000000000003
Query Start/End: Original strand, 395 - 486
Target Start/End: Original strand, 10902746 - 10902839
Alignment:
Q  395 acaactatctttctcatactcacattatgtttttaatttctc--tctattgctttaatttttgtgtcaatatctaattttccttgtaaaatttt 486  Q
    |||||| ||| ||||| |||||||||||||||||| ||||||  ||||||||||| ||||||||| |||||  | |||||| ||||||||||||    
T  10902746 acaactttctctctcacactcacattatgtttttactttctctctctattgctttgatttttgtgccaatacatcattttctttgtaaaatttt 10902839  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #12
Raw Score: 41; E-Value: 0.00000000000005
Query Start/End: Original strand, 395 - 492
Target Start/End: Original strand, 6440123 - 6440222
Alignment:
Q  395 acaactatctttctcatactcacattatgtttttaatttctctc--tattgctttaatttttgtgtcaatatctaattttccttgtaaaattttggttgt 492  Q
    |||||| ||| ||||||||||||||||| |||||| ||||||||  | ||||||| |||||||||||||||  || ||||| |||||||| | |||||||    
T  6440123 acaactttctctctcatactcacattatatttttactttctctctttcttgctttgatttttgtgtcaatacatacttttctttgtaaaaatatggttgt 6440222  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #13
Raw Score: 41; E-Value: 0.00000000000005
Query Start/End: Original strand, 406 - 490
Target Start/End: Complemental strand, 24503242 - 24503158
Alignment:
Q  406 tctcatactcacattatgtttttaatttctctctattgctttaatttttgtgtcaatatctaattttccttgtaaaattttggtt 490  Q
    ||||||||| |||||||||||||| ||||||  ||||| |||| |||||||||||||| ||  ||||| |||||||||| |||||    
T  24503242 tctcatacttacattatgtttttactttctcattattgttttagtttttgtgtcaataactctttttctttgtaaaattatggtt 24503158  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #14
Raw Score: 41; E-Value: 0.00000000000005
Query Start/End: Original strand, 433 - 509
Target Start/End: Original strand, 29025341 - 29025417
Alignment:
Q  433 tctctctattgctttaatttttgtgtcaatatctaattttccttgtaaaattttggttgtttcaaaaattgtaatat 509  Q
    |||||||||||||||  |||||||||||||| || |||||| ||||||||||||||||||  ||||| |||| ||||    
T  29025341 tctctctattgctttggtttttgtgtcaatacctcattttctttgtaaaattttggttgtcccaaaagttgtcatat 29025417  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #15
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 406 - 502
Target Start/End: Complemental strand, 32501215 - 32501117
Alignment:
Q  406 tctcatactcacattatgtttttaatttctctct--attgctttaatttttgtgtcaatatctaattttccttgtaaaattttggttgtttcaaaaatt 502  Q
    ||||||||||||||||| ||||||  ||||||||  ||| |||| |||||||||||| || || |||| | ||||||||||||||||||  ||||||||    
T  32501215 tctcatactcacattatttttttacgttctctctctattactttgatttttgtgtcactacctcatttcctttgtaaaattttggttgtcacaaaaatt 32501117  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #16
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 406 - 481
Target Start/End: Complemental strand, 43632355 - 43632280
Alignment:
Q  406 tctcatactcacattatgtttttaatttctctctattgctttaatttttgtgtcaatatctaattttccttgtaaa 481  Q
    |||||||||||||| ||||||||| || ||||||||||||||  |||||||||||||| || |||||  |||||||    
T  43632355 tctcatactcacatcatgtttttacttcctctctattgctttggtttttgtgtcaatacctcattttatttgtaaa 43632280  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #17
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 406 - 492
Target Start/End: Complemental strand, 5277518 - 5277430
Alignment:
Q  406 tctcatactcacattatgtttttaatttctctct--attgctttaatttttgtgtcaatatctaattttccttgtaaaattttggttgt 492  Q
    ||||||||||||||||| |||||| |||||||||  ||||||| | ||||||||||| || || |||| | ||||||||||||| ||||    
T  5277518 tctcatactcacattatctttttactttctctctctattgcttaagtttttgtgtcactacctcatttcctttgtaaaattttgattgt 5277430  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #18
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 406 - 492
Target Start/End: Complemental strand, 5740804 - 5740716
Alignment:
Q  406 tctcatactcacattatgtttttaatt--tctctctattgctttaatttttgtgtcaatatctaattttccttgtaaaattttggttgt 492  Q
    |||||||||||||||||||||||| ||  ||||||||||| |||  |||||||||| ||| ||  ||||| |||||||||| |||||||    
T  5740804 tctcatactcacattatgtttttactttctctctctattgttttggtttttgtgtcgatacctctttttctttgtaaaattatggttgt 5740716  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #19
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 406 - 492
Target Start/End: Complemental strand, 12898948 - 12898860
Alignment:
Q  406 tctcatactcacattatgtttttaattt--ctctctattgctttaatttttgtgtcaatatctaattttccttgtaaaattttggttgt 492  Q
    ||||||||||||||||| |||||| |||  ||||||||||||||  |||||| | || ||||| |||| | ||||||||||||||||||    
T  12898948 tctcatactcacattatctttttactttatctctctattgctttggtttttgcgccactatctcatttcctttgtaaaattttggttgt 12898860  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #20
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 395 - 485
Target Start/End: Original strand, 44061759 - 44061851
Alignment:
Q  395 acaactatctttctcatactcacattatgtttttaatttctct--ctattgctttaatttttgtgtcaatatctaattttccttgtaaaattt 485  Q
    |||||| ||| |||||||||||||||||  ||||| |||||||  || ||||||| |||||||||||| ||||||| |||| ||||| |||||    
T  44061759 acaactttctctctcatactcacattatcattttactttctctttctgttgctttgatttttgtgtcactatctaaatttctttgtataattt 44061851  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #21
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 397 - 463
Target Start/End: Complemental strand, 6511887 - 6511821
Alignment:
Q  397 aactatctttctcatactcacattatgtttttaatttctctctattgctttaatttttgtgtcaata 463  Q
    |||| ||| ||||||||| | |||||||||||| ||||||||||||  |||| ||||||||||||||    
T  6511887 aactttctctctcatacttatattatgtttttattttctctctattattttagtttttgtgtcaata 6511821  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #22
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 406 - 492
Target Start/End: Original strand, 7271904 - 7271990
Alignment:
Q  406 tctcatactcacattatgtttttaatttctctctattgctttaatttttgtgtcaatatctaattttccttgtaaaattttggttgt 492  Q
    ||||||||||||||||  |||||| | |||||||||||||||  ||||||||||| ||||| ||||   ||| ||||||||| ||||    
T  7271904 tctcatactcacattaattttttactctctctctattgctttggtttttgtgtcactatctcatttcttttgcaaaattttgattgt 7271990  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #23
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 395 - 498
Target Start/End: Complemental strand, 23754736 - 23754631
Alignment:
Q  395 acaactatctttctcatactcacattatgtttttaatttctctc--tattgctttaatttttgtgtcaatatctaattttccttgtaaaattttggttgt 492  Q
    |||||| ||| | ||||||||| ||||| |||||| ||| ||||  ||||| |||  |||||||||||||  || |||||| ||||||||||||||||||    
T  23754736 acaactttctctttcatactcatattatatttttactttatctcactattgttttggtttttgtgtcaatcactcattttctttgtaaaattttggttgt 23754637  T
Q  493 ttcaaa 498  Q
    | ||||    
T  23754636 tgcaaa 23754631  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #24
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 408 - 487
Target Start/End: Complemental strand, 36816633 - 36816552
Alignment:
Q  408 tcatactcacattatgtttttaattt--ctctctattgctttaatttttgtgtcaatatctaattttccttgtaaaattttg 487  Q
    ||||||||||||||| |||||| |||  |||||||||||||| |||||||||| ||||  | |||||| ||| |||||||||    
T  36816633 tcatactcacattatctttttactttttctctctattgctttgatttttgtgttaatacgtcattttctttgcaaaattttg 36816552  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #25
Raw Score: 34; E-Value: 0.0000000007
Query Start/End: Original strand, 410 - 492
Target Start/End: Original strand, 10731602 - 10731686
Alignment:
Q  410 atactcacattatgtttttaatttctc--tctattgctttaatttttgtgtcaatatctaattttccttgtaaaattttggttgt 492  Q
    ||||||| ||||| |||||| ||||||  ||||||||||| |||||||||||||||  | |||| | ||||||||||||| ||||    
T  10731602 atactcatattatctttttactttctctctctattgctttgatttttgtgtcaatacttcatttcctttgtaaaattttgattgt 10731686  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #26
Raw Score: 34; E-Value: 0.0000000007
Query Start/End: Original strand, 406 - 492
Target Start/End: Complemental strand, 12735030 - 12734942
Alignment:
Q  406 tctcatactcacattatgtttttaatttctctctat--tgctttaatttttgtgtcaatatctaattttccttgtaaaattttggttgt 492  Q
    ||||||||||| ||||||||||||  || |||||||  | |||| ||||||||||||||| ||| ||||| ||||||| |||| |||||    
T  12735030 tctcatactcatattatgtttttaccttatctctatattactttgatttttgtgtcaatacctacttttcattgtaaatttttagttgt 12734942  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #27
Raw Score: 34; E-Value: 0.0000000007
Query Start/End: Original strand, 406 - 492
Target Start/End: Complemental strand, 31249543 - 31249455
Alignment:
Q  406 tctcatactcacattatgtttttaatt--tctctctattgctttaatttttgtgtcaatatctaattttccttgtaaaattttggttgt 492  Q
    ||||||||||||||||| |||||| ||  |||||||||||||||  |||||||  || || || |||| | ||||||||||||||||||    
T  31249543 tctcatactcacattatctttttactttctctctctattgctttggtttttgtaccactacctcatttcctttgtaaaattttggttgt 31249455  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #28
Raw Score: 34; E-Value: 0.0000000007
Query Start/End: Original strand, 406 - 463
Target Start/End: Complemental strand, 33605096 - 33605039
Alignment:
Q  406 tctcatactcacattatgtttttaatttctctctattgctttaatttttgtgtcaata 463  Q
    ||||||||||||||| |||||||| | |||||||||||||||  | ||||||||||||    
T  33605096 tctcatactcacattgtgtttttactctctctctattgctttggtatttgtgtcaata 33605039  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #29
Raw Score: 34; E-Value: 0.0000000007
Query Start/End: Original strand, 433 - 478
Target Start/End: Original strand, 39856119 - 39856164
Alignment:
Q  433 tctctctattgctttaatttttgtgtcaatatctaattttccttgt 478  Q
    ||||||||||||||| ||||||||||||||||||| ||||| ||||    
T  39856119 tctctctattgctttgatttttgtgtcaatatctatttttctttgt 39856164  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #30
Raw Score: 34; E-Value: 0.0000000007
Query Start/End: Original strand, 406 - 492
Target Start/End: Complemental strand, 41639818 - 41639728
Alignment:
Q  406 tctcatactcacattatgtttttaatttctctct----attgctttaatttttgtgtcaatatctaattttccttgtaaaattttggttgt 492  Q
    ||||||||||||||||| |||||| |||||||||    |||||||| ||||||||||||| |  || ||||| |||||||| | |||||||    
T  41639818 tctcatactcacattatatttttactttctctctctctattgctttgatttttgtgtcaacacatacttttctttgtaaaaatatggttgt 41639728  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #31
Raw Score: 34; E-Value: 0.0000000007
Query Start/End: Original strand, 408 - 482
Target Start/End: Original strand, 45405586 - 45405662
Alignment:
Q  408 tcatactcacattatgtttttaatttctc--tctattgctttaatttttgtgtcaatatctaattttccttgtaaaa 482  Q
    ||||| ||||||||| |||||| ||||||  ||||||||||| ||||| |||||||||| | |||||| ||||||||    
T  45405586 tcatattcacattatatttttactttctctctctattgctttgattttcgtgtcaatatatgattttctttgtaaaa 45405662  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #32
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 406 - 499
Target Start/End: Original strand, 7598761 - 7598855
Alignment:
Q  406 tctcatactcacattatgtttttaatttctc--tctattgctttaatttttgtgtcaatatctaattttccttgtaaaattttggttgtttcaaaa 499  Q
    |||||||||||||||||||||||| ||||||  | ||||| |||  ||||| |||||||| || ||||||  ||| ||||||||||||| ||||||    
T  7598761 tctcatactcacattatgtttttactttctcaatatattgttttggtttttatgtcaataccttattttctatgt-aaattttggttgtctcaaaa 7598855  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #33
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 395 - 492
Target Start/End: Complemental strand, 25830275 - 25830176
Alignment:
Q  395 acaactatctttctcatactcacattatgtttttaatt--tctctctattgctttaatttttgtgtcaatatctaattttccttgtaaaattttggttgt 492  Q
    |||||| ||| ||||||||||||||||| |||||| ||  |||||||||| |||| || |||||| |||||  || ||||| |||||||| | |||||||    
T  25830275 acaactttctctctcatactcacattatatttttactttctctctctattactttgatatttgtgccaatacatacttttctttgtaaaaatgtggttgt 25830176  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #34
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 406 - 463
Target Start/End: Original strand, 26000590 - 26000649
Alignment:
Q  406 tctcatactcacattatgtttttaattt--ctctctattgctttaatttttgtgtcaata 463  Q
    |||||||||||| ||||||||||| |||  |||||||||||||| ||||| |||||||||    
T  26000590 tctcatactcacgttatgtttttattttatctctctattgctttgattttcgtgtcaata 26000649  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #35
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 395 - 492
Target Start/End: Original strand, 35067202 - 35067301
Alignment:
Q  395 acaactatctttctcatactcacattatgtttttaatt--tctctctattgctttaatttttgtgtcaatatctaattttccttgtaaaattttggttgt 492  Q
    |||||| ||| ||||||||||||||||| |||||| ||  |||||||||||||||  |||||||| ||| |  || ||||| |||||||| | |||||||    
T  35067202 acaactttctctctcatactcacattatatttttactttctctctctattgctttggtttttgtgccaacacatacttttctttgtaaaaatatggttgt 35067301  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #36
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 395 - 492
Target Start/End: Complemental strand, 36660480 - 36660381
Alignment:
Q  395 acaactatctttctcatactcacattatgtttttaatttctctct--attgctttaatttttgtgtcaatatctaattttccttgtaaaattttggttgt 492  Q
    |||||| ||| ||||||||| ||||||| |||||| |||||||||  ||||||||  || |||||||||||  | |||||| || |||||||||| ||||    
T  36660480 acaactttctctctcatacttacattatctttttactttctctctctattgctttggttattgtgtcaatacttcattttctttataaaattttgattgt 36660381  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #37
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 406 - 490
Target Start/End: Original strand, 22719492 - 22719578
Alignment:
Q  406 tctcatactcacattatgtttttaatttctc--tctattgctttaatttttgtgtcaatatctaattttccttgtaaaattttggtt 490  Q
    |||||| |||||||||| |||||| ||||||  |||||||||||  ||||||||  | || || |||||| ||||||||||||||||    
T  22719492 tctcatgctcacattatctttttactttctctctctattgctttggtttttgtgcaactacctcattttctttgtaaaattttggtt 22719578  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #38
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 395 - 487
Target Start/End: Original strand, 27325799 - 27325893
Alignment:
Q  395 acaactatctttctcatactcacattatgtttttaatt--tctctctattgctttaatttttgtgtcaatatctaattttccttgtaaaattttg 487  Q
    |||||| ||| |||||||||||||| || |||||| ||  |||||||||||||||  |||||||| || || || |||| | |||||||||||||    
T  27325799 acaactttctctctcatactcacatgatctttttactttctctctctattgctttggtttttgtgccactacctcatttcctttgtaaaattttg 27325893  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #39
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 395 - 463
Target Start/End: Original strand, 39211083 - 39211153
Alignment:
Q  395 acaactatctttctcatactcacattatgttttta--atttctctctattgctttaatttttgtgtcaata 463  Q
    |||||| ||| ||||||||||||||| ||||||||   ||||||||||||| |||  ||||||||||||||    
T  39211083 acaactttctctctcatactcacattttgtttttactttttctctctattgttttggtttttgtgtcaata 39211153  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #40
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 395 - 472
Target Start/End: Original strand, 157097 - 157175
Alignment:
Q  395 acaactatctttctcatactcacattatgtttttaatttctct-ctattgctttaatttttgtgtcaatatctaatttt 472  Q
    |||||| ||| ||||||||| ||||||| |||||| ||| ||| | |||||||| ||||| ||||||||||||| ||||    
T  157097 acaactttctctctcatacttacattatatttttactttatcttcgattgctttgattttcgtgtcaatatctactttt 157175  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #41
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 406 - 485
Target Start/End: Complemental strand, 5601005 - 5600924
Alignment:
Q  406 tctcatactcacattatgtttttaatttctctct--attgctttaatttttgtgtcaatatctaattttccttgtaaaattt 485  Q
    |||||||||||||| ||  || || |||||||||  |||||||| ||||||||||||  |||||| |||| |||||||||||    
T  5601005 tctcatactcacatgattattctactttctctctttattgctttgatttttgtgtcaccatctaaatttctttgtaaaattt 5600924  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #42
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 406 - 485
Target Start/End: Original strand, 5639615 - 5639696
Alignment:
Q  406 tctcatactcacattatgtttttaatttctctct--attgctttaatttttgtgtcaatatctaattttccttgtaaaattt 485  Q
    |||||||||||||| ||  || || |||||||||  |||||||| ||||||||||||  |||||| |||| |||||||||||    
T  5639615 tctcatactcacatgattattctactttctctctttattgctttgatttttgtgtcaccatctaaatttctttgtaaaattt 5639696  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #43
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 402 - 463
Target Start/End: Complemental strand, 7603686 - 7603627
Alignment:
Q  402 tctttctcatactcacattatgtttttaatttctctctattgctttaatttttgtgtcaata 463  Q
    ||||| |||||||||| |||||||||||  |||||||||||||| || |||| |||||||||    
T  7603686 tctttttcatactcactttatgttttta--ttctctctattgctatagttttcgtgtcaata 7603627  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #44
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 395 - 457
Target Start/End: Original strand, 13970961 - 13971022
Alignment:
Q  395 acaactatctttctcatactcacattatgtttttaatttctctctattgctttaatttttgtg 457  Q
    |||||| ||| ||||||||||| ||||| |||| | ||||||||||||||||| |||||||||    
T  13970961 acaactttctctctcatactcatattatatttt-attttctctctattgctttgatttttgtg 13971022  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #45
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 395 - 466
Target Start/End: Complemental strand, 24798387 - 24798314
Alignment:
Q  395 acaactatctttctcatactcacattatgtttttaatttctc--tctattgctttaatttttgtgtcaatatct 466  Q
    |||||| ||| ||||||||||||||||| |||||| ||||||  ||||||| ||| |||||| | |||||||||    
T  24798387 acaactttctctctcatactcacattatatttttactttctctttctattgttttgatttttatatcaatatct 24798314  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #46
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 406 - 485
Target Start/End: Complemental strand, 25987805 - 25987724
Alignment:
Q  406 tctcatactcacattatgtttttaattt--ctctctattgctttaatttttgtgtcaatatctaattttccttgtaaaattt 485  Q
    |||||||||||||||||  || || |||  |||||||||||||| |||||||||||| || |||| |||| ||||| |||||    
T  25987805 tctcatactcacattatcattctactttatctctctattgctttgatttttgtgtcactacctaaatttctttgtataattt 25987724  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #47
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 397 - 464
Target Start/End: Complemental strand, 32020493 - 32020422
Alignment:
Q  397 aactatctttctcatactcacattatgtttttaatttctct----ctattgctttaatttttgtgtcaatat 464  Q
    |||| ||| |||||||||| ||||||||||||| |||||||    |||||||||| ||||| ||||||||||    
T  32020493 aactttctctctcatactcgcattatgtttttactttctctctcgctattgctttgattttcgtgtcaatat 32020422  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #48
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 395 - 499
Target Start/End: Original strand, 32133369 - 32133470
Alignment:
Q  395 acaactatctttctcatactcacattatgtttttaatttctctctattgctttaatttttgtgtcaatatctaattttccttgtaaaattttggttgttt 494  Q
    |||||| ||| |||| || |||||||||||||||| ||||||||||||| ||   |   |||||||||| || |||||  |||||||||||||||| | |    
T  32133369 acaactttctctctcttattcacattatgtttttactttctctctattgttt---tggatgtgtcaataccttattttatttgtaaaattttggttatct 32133465  T
Q  495 caaaa 499  Q
    |||||    
T  32133466 caaaa 32133470  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #49
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 409 - 504
Target Start/End: Complemental strand, 38958567 - 38958470
Alignment:
Q  409 catactcacattatgtttttaatttctc--tctattgctttaatttttgtgtcaatatctaattttccttgtaaaattttggttgtttcaaaaattgt 504  Q
    ||||||| ||||||||||||| ||||||  | |||||||||  |||||||||  ||| || |||||| ||||||| |  |||||||| ||||||||||    
T  38958567 catactcgcattatgtttttactttctctttttattgctttggtttttgtgttcatacctcattttctttgtaaattgatggttgttccaaaaattgt 38958470  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #50
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 400 - 482
Target Start/End: Complemental strand, 3413217 - 3413133
Alignment:
Q  400 tatctttctcatactcacattatgtttttaatttc--tctctattgctttaatttttgtgtcaatatctaattttccttgtaaaa 482  Q
    ||||| ||||||||||||||||| |||||| ||||  | |||||||||||  |||||||| |||||  | |||||| ||||||||    
T  3413217 tatctctctcatactcacattatatttttactttctttttctattgctttggtttttgtgccaatacatgattttctttgtaaaa 3413133  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #51
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 395 - 492
Target Start/End: Complemental strand, 10644831 - 10644732
Alignment:
Q  395 acaactatctttctcatactcacattatgtttttaattt--ctctctattgctttaatttttgtgtcaatatctaattttcc-ttgtaaaattttggttg 491  Q
    |||||| ||| ||||||| |||||| ||||||||| |||  |||||||||||||||||||| ||| ||| | ||| |||||| ||||||| || ||||||    
T  10644831 acaactttctctctcataatcacat-atgtttttactttatctctctattgctttaattttcgtgccaaaacctacttttcctttgtaaatttatggttg 10644733  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #52
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 406 - 439
Target Start/End: Complemental strand, 21526299 - 21526266
Alignment:
Q  406 tctcatactcacattatgtttttaatttctctct 439  Q
    |||||||||||||||||||||||| |||||||||    
T  21526299 tctcatactcacattatgtttttactttctctct 21526266  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #53
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 395 - 457
Target Start/End: Complemental strand, 29028990 - 29028927
Alignment:
Q  395 acaactatctttctcatactcacattatgtttttaattt--ctctctattgctttaatttttgtg 457  Q
    |||||| ||| ||| ||||||||||||| ||||||||||  |||||||||||||| |||||||||    
T  29028990 acaactttctctcttatactcacattat-tttttaatttatctctctattgctttgatttttgtg 29028927  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #54
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 395 - 492
Target Start/End: Complemental strand, 67190 - 67091
Alignment:
Q  395 acaactatctttctcatactcacattatgtttttaatt--tctctctattgctttaatttttgtgtcaatatctaattttccttgtaaaattttggttgt 492  Q
    |||||| ||| |||||||| |||||||| |||||| ||  |||||||||| |||| || |||||| |||||  | |||||| |||||||| | |||||||    
T  67190 acaactttctctctcatacccacattatatttttacttcttctctctattactttgatatttgtgccaatacatgattttctttgtaaaaatgtggttgt 67091  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #55
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 414 - 490
Target Start/End: Complemental strand, 144265 - 144189
Alignment:
Q  414 tcacattatgtttttaatttctctctattgctttaatttttgtgtcaatatctaattttccttgtaaaattttggtt 490  Q
    ||||||||||||| || ||||||||||||| |||  || || ||| ||||||| |||||| ||||||| || |||||    
T  144265 tcacattatgtttctattttctctctattgttttggttcttttgttaatatctgattttctttgtaaatttatggtt 144189  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #56
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 406 - 463
Target Start/End: Complemental strand, 3547178 - 3547119
Alignment:
Q  406 tctcatactcacattatgtttttaatttc--tctctattgctttaatttttgtgtcaata 463  Q
    ||||||||| |||||||||||||| ||||  |||||||| ||||  ||||||||||||||    
T  3547178 tctcatacttacattatgtttttattttctttctctattactttggtttttgtgtcaata 3547119  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #57
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 410 - 467
Target Start/End: Original strand, 6445233 - 6445292
Alignment:
Q  410 atactcacattatgtttttaattt--ctctctattgctttaatttttgtgtcaatatcta 467  Q
    |||||||||| ||||||||| |||  |||||||||| ||| |||||||||| ||||||||    
T  6445233 atactcacataatgtttttactttatctctctattgttttgatttttgtgttaatatcta 6445292  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #58
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 395 - 439
Target Start/End: Original strand, 7325756 - 7325800
Alignment:
Q  395 acaactatctttctcatactcacattatgtttttaatttctctct 439  Q
    |||||| ||| |||||||||||||||||||||||| | |||||||    
T  7325756 acaactttctctctcatactcacattatgtttttattctctctct 7325800  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #59
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 395 - 439
Target Start/End: Complemental strand, 11114699 - 11114655
Alignment:
Q  395 acaactatctttctcatactcacattatgtttttaatttctctct 439  Q
    |||||| ||| ||||||| |||||||||||||||| |||||||||    
T  11114699 acaactttctctctcatattcacattatgtttttattttctctct 11114655  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #60
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 395 - 439
Target Start/End: Complemental strand, 12490802 - 12490758
Alignment:
Q  395 acaactatctttctcatactcacattatgtttttaatttctctct 439  Q
    |||||| ||| |||||||||||||||||||||||| | |||||||    
T  12490802 acaactttctctctcatactcacattatgtttttattctctctct 12490758  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #61
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 433 - 493
Target Start/End: Original strand, 13106561 - 13106621
Alignment:
Q  433 tctctctattgctttaatttttgtgtcaatatctaattttccttgtaaaattttggttgtt 493  Q
    |||||||||||||||  |||||||||||||| ||  ||||| ||||||| || ||||||||    
T  13106561 tctctctattgctttgctttttgtgtcaatacctctttttctttgtaaatttatggttgtt 13106621  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #62
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 395 - 439
Target Start/End: Original strand, 24116081 - 24116125
Alignment:
Q  395 acaactatctttctcatactcacattatgtttttaatttctctct 439  Q
    |||||| ||||||||||||| |||||||||||||| | |||||||    
T  24116081 acaactttctttctcatacttacattatgtttttattctctctct 24116125  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #63
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 395 - 439
Target Start/End: Original strand, 24946043 - 24946087
Alignment:
Q  395 acaactatctttctcatactcacattatgtttttaatttctctct 439  Q
    |||||| ||| |||||||||||||||||||||||| | |||||||    
T  24946043 acaactttctctctcatactcacattatgtttttattctctctct 24946087  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #64
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 395 - 456
Target Start/End: Original strand, 34718157 - 34718219
Alignment:
Q  395 acaactatctttctcatactcacattatgtttttaatt--tctctctattgctttaatttttgt 456  Q
    |||||| ||| ||||||||||||||||| |||||| ||  ||||||||||||||| ||||||||    
T  34718157 acaactttctctctcatactcacattat-tttttactttatctctctattgctttgatttttgt 34718219  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #65
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 406 - 487
Target Start/End: Complemental strand, 37449444 - 37449361
Alignment:
Q  406 tctcatactcacattatgtttttaatttc--tctctattgctttaatttttgtgtcaatatctaattttccttgtaaaattttg 487  Q
    ||||||||||||||||| |||||| ||||  |||||||||||||  ||||||||  | || || |||| | |||||||||||||    
T  37449444 tctcatactcacattatctttttactttctgtctctattgctttggtttttgtgctactacctcatttcctttgtaaaattttg 37449361  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #66
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 395 - 439
Target Start/End: Complemental strand, 43285992 - 43285948
Alignment:
Q  395 acaactatctttctcatactcacattatgtttttaatttctctct 439  Q
    |||||| ||| ||||||||||||||||| |||||| |||||||||    
T  43285992 acaactttctctctcatactcacattatatttttactttctctct 43285948  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #67
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 395 - 439
Target Start/End: Original strand, 43715916 - 43715960
Alignment:
Q  395 acaactatctttctcatactcacattatgtttttaatttctctct 439  Q
    |||||| ||| ||||||||||||||||| |||||| |||||||||    
T  43715916 acaactttctctctcatactcacattatatttttactttctctct 43715960  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4 (Bit Score: 58; Significance: 4e-24; HSPs: 88)
Name: chr4
Description:

Target: chr4; HSP #1
Raw Score: 58; E-Value: 4e-24
Query Start/End: Original strand, 395 - 492
Target Start/End: Complemental strand, 53801787 - 53801690
Alignment:
Q  395 acaactatctttctcatactcacattatgtttttaatttctctctattgctttaatttttgtgtcaatatctaattttccttgtaaaattttggttgt 492  Q
    |||||| | ||| ||||||||||||||| |||||| |||||||||||||||||| |||||||||||||| || |||| | ||||||||||||||||||    
T  53801787 acaactttttttttcatactcacattatctttttactttctctctattgctttagtttttgtgtcaatacctcatttcctttgtaaaattttggttgt 53801690  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #2
Raw Score: 56; E-Value: 5e-23
Query Start/End: Original strand, 406 - 502
Target Start/End: Original strand, 37997306 - 37997404
Alignment:
Q  406 tctcatactcacattatgtttttaatttctc--tctattgctttaatttttgtgtcaatatctaattttccttgtaaaattttggttgtttcaaaaatt 502  Q
    ||||||||||||||||| |||||| ||||||  ||||||||||| ||||||||||||||| || |||||| ||||||||||||||||||  ||||||||    
T  37997306 tctcatactcacattatctttttactttctctctctattgctttgatttttgtgtcaatacctcattttctttgtaaaattttggttgtaacaaaaatt 37997404  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #3
Raw Score: 51; E-Value: 5e-20
Query Start/End: Original strand, 406 - 492
Target Start/End: Original strand, 29175279 - 29175365
Alignment:
Q  406 tctcatactcacattatgtttttaatttctctctattgctttaatttttgtgtcaatatctaattttccttgtaaaattttggttgt 492  Q
    ||||||||||||||||| |||||| ||||||||| |||||||  |||||||||||||| || |||| | ||||||||||||||||||    
T  29175279 tctcatactcacattatctttttactttctctctcttgctttggtttttgtgtcaatagctcatttactttgtaaaattttggttgt 29175365  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #4
Raw Score: 50; E-Value: 2e-19
Query Start/End: Original strand, 406 - 463
Target Start/End: Original strand, 24045297 - 24045354
Alignment:
Q  406 tctcatactcacattatgtttttaatttctctctattgctttaatttttgtgtcaata 463  Q
    |||||||||||||||||||||||| ||||||||||||||||| |||||||||||||||    
T  24045297 tctcatactcacattatgtttttactttctctctattgctttgatttttgtgtcaata 24045354  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #5
Raw Score: 50; E-Value: 2e-19
Query Start/End: Original strand, 406 - 463
Target Start/End: Complemental strand, 40693641 - 40693584
Alignment:
Q  406 tctcatactcacattatgtttttaatttctctctattgctttaatttttgtgtcaata 463  Q
    |||||||||||||||||||||||| ||||||||||||||||||||||||||| |||||    
T  40693641 tctcatactcacattatgtttttactttctctctattgctttaatttttgtgccaata 40693584  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #6
Raw Score: 48; E-Value: 3e-18
Query Start/End: Original strand, 410 - 504
Target Start/End: Complemental strand, 56474778 - 56474686
Alignment:
Q  410 atactcacattatgtttttaatttctctctattgctttaatttttgtgtcaatatctaattttccttgtaaaattttggttgtttcaaaaattgt 504  Q
    |||||||||||||||||||| |  |||||||||| |||  |||||||||||||| || |||||| ||||||| |||||||||| |||||||||||    
T  56474778 atactcacattatgtttttact--ctctctattgttttggtttttgtgtcaatacctcattttctttgtaaagttttggttgtctcaaaaattgt 56474686  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #7
Raw Score: 47; E-Value: 1e-17
Query Start/End: Original strand, 397 - 492
Target Start/End: Complemental strand, 27051114 - 27051017
Alignment:
Q  397 aactatctttctcatactcacattatgtttttaatttctctct--attgctttaatttttgtgtcaatatctaattttccttgtaaaattttggttgt 492  Q
    |||| ||| ||||||||||||||||| ||||||  ||||||||  |||| |||  ||||||||||||||||| |||||| ||||||||||||||||||    
T  27051114 aactttctctctcatactcacattatctttttaccttctctctttattgttttggtttttgtgtcaatatctcattttctttgtaaaattttggttgt 27051017  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #8
Raw Score: 45; E-Value: 2e-16
Query Start/End: Original strand, 395 - 492
Target Start/End: Complemental strand, 2268537 - 2268438
Alignment:
Q  395 acaactatctttctcatactcacattatgtttttaatttctct--ctattgctttaatttttgtgtcaatatctaattttccttgtaaaattttggttgt 492  Q
    |||||| ||| ||||||||||||||||| |||||| ||| |||  |||||| |||  ||||||||||||||||| |||| | ||||||||||||||||||    
T  2268537 acaactttctctctcatactcacattatctttttactttttctttctattgttttggtttttgtgtcaatatctcatttcctttgtaaaattttggttgt 2268438  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #9
Raw Score: 45; E-Value: 2e-16
Query Start/End: Original strand, 395 - 492
Target Start/End: Complemental strand, 50608654 - 50608555
Alignment:
Q  395 acaactatctttctcatactcacattatgtttttaatt--tctctctattgctttaatttttgtgtcaatatctaattttccttgtaaaattttggttgt 492  Q
    |||||| ||| | ||||||||||||||| |||||| ||  |||||||||| |||| |||||||||||||||||| |||| | |||||||||||| |||||    
T  50608654 acaactttctctttcatactcacattatttttttacttcctctctctattactttgatttttgtgtcaatatctcatttcctttgtaaaattttagttgt 50608555  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #10
Raw Score: 43; E-Value: 0.000000000000003
Query Start/End: Original strand, 395 - 509
Target Start/End: Complemental strand, 2575818 - 2575704
Alignment:
Q  395 acaactatctttctcatactcacattatgtttttaatttctctctattgctttaatttttgtgtcaatatctaattttccttgtaaaattttggttgttt 494  Q
    |||||| ||| || |||||||| |||||||| ||| |||||||||||||||||  ||| ||||||||| ||| |||||| |||||||| ||| |||||      
T  2575818 acaactttctctcacatactcatattatgttgttactttctctctattgctttggtttgtgtgtcaatctctcattttctttgtaaaactttagttgtca 2575719  T
Q  495 caaaaattgtaatat 509  Q
    ||||| |||| ||||    
T  2575718 caaaagttgtcatat 2575704  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #11
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 408 - 498
Target Start/End: Complemental strand, 7632478 - 7632386
Alignment:
Q  408 tcatactcacattatgtttttaatttctctct--attgctttaatttttgtgtcaatatctaattttccttgtaaaattttggttgtttcaaa 498  Q
    ||||||||||||||| |||||| |||||||||  |||||||| ||||||||| ||||  || |||||  ||||||||||||||||||| ||||    
T  7632478 tcatactcacattatatttttactttctctctctattgctttgatttttgtgccaatcactcattttatttgtaaaattttggttgttgcaaa 7632386  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #12
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 426 - 499
Target Start/End: Complemental strand, 32130236 - 32130163
Alignment:
Q  426 tttaatttctctctattgctttaatttttgtgtcaatatctaattttccttgtaaaattttggttgtttcaaaa 499  Q
    |||| |||||||||||| ||||||||||||| ||||||  | |||||| ||||| |||||||||||||||||||    
T  32130236 tttactttctctctatttctttaatttttgtatcaatacatcattttctttgtataattttggttgtttcaaaa 32130163  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #13
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 406 - 492
Target Start/End: Original strand, 37297101 - 37297188
Alignment:
Q  406 tctcatactcacattatgtttttaatt--tctctctattgctttaatttttgtgtcaatatctaattttccttgtaaaattttggttgt 492  Q
    ||||||||||||||||| |||||| ||  |||||||||||||||  ||||||||||| || || | |||||||||||||||||||||||    
T  37297101 tctcatactcacattatctttttactttctctctctattgctttggtttttgtgtcactacctca-tttccttgtaaaattttggttgt 37297188  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #14
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 395 - 456
Target Start/End: Complemental strand, 38792919 - 38792858
Alignment:
Q  395 acaactatctttctcatactcacattatgtttttaatttctctctattgctttaatttttgt 456  Q
    |||||| ||| ||||||||||||||||| |||||| ||||||||||||||||| ||||||||    
T  38792919 acaactttctctctcatactcacattatatttttactttctctctattgctttgatttttgt 38792858  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #15
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 395 - 509
Target Start/End: Original strand, 39478476 - 39478594
Alignment:
Q  395 acaactatctttctcatactcacattatgttttta----atttctctctattgctttaatttttgtgtcaatatctaattttccttgtaaaattttggtt 490  Q
    |||||| ||| ||||||||||| ||||| ||||||     ||||||| |||| |||| ||||||||||||||| || |||||| ||||||||||||||||    
T  39478476 acaactttctctctcatactcatattatttttttactttctttctctatattactttgatttttgtgtcaatacctcattttctttgtaaaattttggtt 39478575  T
Q  491 gtttcaaaaattgtaatat 509  Q
    ||  ||||| |||| ||||    
T  39478576 gtcacaaaagttgtcatat 39478594  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #16
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 410 - 504
Target Start/End: Original strand, 42853633 - 42853729
Alignment:
Q  410 atactcacattatgtttttaatttctc--tctattgctttaatttttgtgtcaatatctaattttccttgtaaaattttggttgtttcaaaaattgt 504  Q
    ||||||| |||||||||| | ||||||  |||||||||||  |||||||||||||| || |||||| || |||||||||| |||| |||||||||||    
T  42853633 atactcatattatgttttcactttctctctctattgctttggtttttgtgtcaatacctcattttctttataaaattttgattgtctcaaaaattgt 42853729  T

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Target: chr4; HSP #17
Raw Score: 41; E-Value: 0.00000000000005
Query Start/End: Original strand, 395 - 492
Target Start/End: Complemental strand, 10250545 - 10250446
Alignment:
Q  395 acaactatctttctcatactcacattatgtttttaatt--tctctctattgctttaatttttgtgtcaatatctaattttccttgtaaaattttggttgt 492  Q
    |||||| ||| ||||||||||||||||| |||||| ||  |||||||||||||||  |||||||| || ||  | |||||| ||||||||||||||||||    
T  10250545 acaactttctctctcatactcacattatctttttactttctctctctattgctttggtttttgtgccactacttcattttctttgtaaaattttggttgt 10250446  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #18
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 395 - 463
Target Start/End: Original strand, 39606008 - 39606078
Alignment:
Q  395 acaactatctttctcatactcacattatgtttttaatttc--tctctattgctttaatttttgtgtcaata 463  Q
    |||||| ||| ||||||||||||||||| |||||| ||||  ||||||||||||||||||||||| |||||    
T  39606008 acaactttctctctcatactcacattatctttttattttccctctctattgctttaatttttgtgccaata 39606078  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #19
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 397 - 492
Target Start/End: Original strand, 44539779 - 44539874
Alignment:
Q  397 aactatctttctcatactcacattatgtttttaatttctctctattgctttaatttttgtgtcaatatctaattttccttgtaaaattttggttgt 492  Q
    |||| ||| ||||||||| | ||||| |||||| |||||||||||||||||  |||||||| || || || |||| | ||||||||||||||||||    
T  44539779 aactttctctctcatacttatattatctttttattttctctctattgctttggtttttgtgacactacctcatttcctttgtaaaattttggttgt 44539874  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #20
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 406 - 481
Target Start/End: Original strand, 52895280 - 52895358
Alignment:
Q  406 tctcatactcacattatgtttttaattt--ctctctattgctttaatttttgtgtcaatatcta-attttccttgtaaa 481  Q
    ||||||| |||||||||||||||| |||  |||||||||||||| ||||| ||||||||||||| |||||| |||||||    
T  52895280 tctcataatcacattatgtttttattttatctctctattgctttgattttcgtgtcaatatctacattttctttgtaaa 52895358  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #21
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 395 - 485
Target Start/End: Original strand, 5386414 - 5386506
Alignment:
Q  395 acaactatctttctcatactcacattatgtttttaatttctc--tctattgctttaatttttgtgtcaatatctaattttccttgtaaaattt 485  Q
    |||||| ||| |||||||||||||||||  ||||| ||||||  ||||||||||| |||||||||| | ||||||| |||| ||||| |||||    
T  5386414 acaactttctctctcatactcacattattcttttactttctctctctattgctttgatttttgtgttactatctaaatttctttgtataattt 5386506  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #22
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 406 - 492
Target Start/End: Complemental strand, 19232152 - 19232065
Alignment:
Q  406 tctcatactcacattatgtttttaatt--tctctctattgctttaatttttgtgtcaatatctaattttccttgtaaaattttggttgt 492  Q
    ||||||||||||||||| |||||| ||  ||||||||||||||| ||||||||| ||||| ||  ||||| ||| ||||||||||||||    
T  19232152 tctcatactcacattatatttttactttctctctctattgctttgatttttgtgccaata-ctttttttctttgcaaaattttggttgt 19232065  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #23
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 406 - 492
Target Start/End: Original strand, 26732277 - 26732365
Alignment:
Q  406 tctcatactcacattatgtttttaatttctc--tctattgctttaatttttgtgtcaatatctaattttccttgtaaaattttggttgt 492  Q
    ||||||||||||||||| |||||| ||||||  ||||||| |||  |||||||| || || || |||||| ||||||||||||||||||    
T  26732277 tctcatactcacattatctttttattttctctctctattgttttggtttttgtgccactacctcattttctttgtaaaattttggttgt 26732365  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #24
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 433 - 502
Target Start/End: Original strand, 39654905 - 39654974
Alignment:
Q  433 tctctctattgctttaatttttgtgtcaatatctaattttccttgtaaaattttggttgtttcaaaaatt 502  Q
    ||||||||||||||| ||||||||||||||| || |||||| ||||||| || ||||||| | |||||||    
T  39654905 tctctctattgctttgatttttgtgtcaatacctcattttctttgtaaatttatggttgtcttaaaaatt 39654974  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #25
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 406 - 492
Target Start/End: Original strand, 40348846 - 40348934
Alignment:
Q  406 tctcatactcacattatgtttttaatttctc--tctattgctttaatttttgtgtcaatatctaattttccttgtaaaattttggttgt 492  Q
    ||||||||||||||||| |||||| ||||||  |||||||||||  ||||||||||| ||||| |||||| ||  ||||||||| ||||    
T  40348846 tctcatactcacattatctttttactttctctctctattgctttggtttttgtgtcactatctcattttctttaaaaaattttgattgt 40348934  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #26
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 406 - 492
Target Start/End: Original strand, 46634152 - 46634240
Alignment:
Q  406 tctcatactcacattatgtttttaatttctc--tctattgctttaatttttgtgtcaatatctaattttccttgtaaaattttggttgt 492  Q
    ||||||||||||||||| |||||| ||||||  |||||| |||| |||||||||||| || || |||| | |||||||||||| |||||    
T  46634152 tctcatactcacattatctttttactttctctttctattactttgatttttgtgtcactacctcatttcctttgtaaaattttagttgt 46634240  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #27
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 408 - 498
Target Start/End: Complemental strand, 50721761 - 50721669
Alignment:
Q  408 tcatactcacattatgtttttaatttctctctat--tgctttaatttttgtgtcaatatctaattttccttgtaaaattttggttgtttcaaa 498  Q
    ||||||||||||||| |||||| ||||||||| |  ||||||  |||||||||||||  || |||||| |||||||||||| |||||| ||||    
T  50721761 tcatactcacattatatttttactttctctctctactgctttggtttttgtgtcaatcactcattttctttgtaaaattttagttgttgcaaa 50721669  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #28
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 406 - 492
Target Start/End: Complemental strand, 50831774 - 50831686
Alignment:
Q  406 tctcatactcacattatgtttttaatttctctct--attgctttaatttttgtgtcaatatctaattttccttgtaaaattttggttgt 492  Q
    |||||||||||||| |||| |||| |||||||||  |||||||| ||||||||||||| | ||  ||||| |||||||||| |||||||    
T  50831774 tctcatactcacatcatgtctttactttctctctctattgctttgatttttgtgtcaagacctctttttctttgtaaaattatggttgt 50831686  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #29
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 395 - 492
Target Start/End: Complemental strand, 1627588 - 1627489
Alignment:
Q  395 acaactatctttctcatactcacattatgtttttaattt--ctctctattgctttaatttttgtgtcaatatctaattttccttgtaaaattttggttgt 492  Q
    |||||| ||| |||||||||| ||||||||||||| |||  |||||| |||||||  |||||||| ||||| || |||||| ||||||| || |||||||    
T  1627588 acaactttctctctcatactcgcattatgtttttactttccctctctgttgctttggtttttgtgccaatacctcattttctttgtaaatttatggttgt 1627489  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #30
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 395 - 443
Target Start/End: Complemental strand, 6520861 - 6520813
Alignment:
Q  395 acaactatctttctcatactcacattatgtttttaatttctctctattg 443  Q
    |||||| ||| |||||||||||||||||||||||| |||||||||||||    
T  6520861 acaactttctctctcatactcacattatgtttttactttctctctattg 6520813  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #31
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 406 - 491
Target Start/End: Original strand, 11068740 - 11068827
Alignment:
Q  406 tctcatactcacattatgtttttaatttctc--tctattgctttaatttttgtgtcaatatctaattttccttgtaaaattttggttg 491  Q
    ||||||| ||||||||| |||||| ||||||  ||||||||||| |||||||||||| |  || |||| | |||||||||||||||||    
T  11068740 tctcatattcacattatctttttactttctctctctattgctttgatttttgtgtcactgcctcatttcctttgtaaaattttggttg 11068827  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #32
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 408 - 509
Target Start/End: Complemental strand, 19473973 - 19473870
Alignment:
Q  408 tcatactcacattatgtttttaattt--ctctctattgctttaatttttgtgtcaatatctaattttccttgtaaaattttggttgtttcaaaaattgta 505  Q
    |||||||||||||||||||| | |||  ||||||| || |||  ||||||||||||||  | |||||| ||||||||||||| |||| |||||| ||||     
T  19473973 tcatactcacattatgttttaactttttctctctaatgttttggtttttgtgtcaatacttcattttctttgtaaaattttgattgtctcaaaagttgtc 19473874  T
Q  506 atat 509  Q
    ||||    
T  19473873 atat 19473870  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #33
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 395 - 504
Target Start/End: Complemental strand, 21775372 - 21775261
Alignment:
Q  395 acaactatctttctcatactcacattatgtttttaatttct--ctctattgctttaatttttgtgtcaatatctaattttccttgtaaaattttggttgt 492  Q
    |||||| || |||| ||||||||||||||| |||| |||||  ||||||||||||  ||| ||||||||||| | ||||||||| |||| || || ||||    
T  21775372 acaactttccttcttatactcacattatgtgtttactttctttctctattgctttggtttctgtgtcaatatttcattttccttataaatttatgattgt 21775273  T
Q  493 ttcaaaaattgt 504  Q
      ||||||||||    
T  21775272 cacaaaaattgt 21775261  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #34
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 395 - 492
Target Start/End: Complemental strand, 31641595 - 31641496
Alignment:
Q  395 acaactatctttctcatactcacattatgtttttaatttctctct--attgctttaatttttgtgtcaatatctaattttccttgtaaaattttggttgt 492  Q
    |||||| ||| ||||| ||||||||||| |||||| ||||| |||  |||||||| |||||||||||| || || |||| | || |||||||||||||||    
T  31641595 acaactttctctctcacactcacattatatttttactttctgtctccattgctttgatttttgtgtcactaccttatttcctttataaaattttggttgt 31641496  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #35
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 395 - 492
Target Start/End: Original strand, 51986083 - 51986182
Alignment:
Q  395 acaactatctttctcatactcacattatgtttttaatttctc--tctattgctttaatttttgtgtcaatatctaattttccttgtaaaattttggttgt 492  Q
    |||||| ||| ||||||||||||||||| |||||| ||||||  |||||| ||||  |||||||| || || || |||| | ||||||||||||||||||    
T  51986083 acaactttctctctcatactcacattatctttttactttctctatctatttctttggtttttgtgccactacctcatttcctttgtaaaattttggttgt 51986182  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #36
Raw Score: 36; E-Value: 0.00000000005
Query Start/End: Original strand, 395 - 479
Target Start/End: Complemental strand, 149514 - 149428
Alignment:
Q  395 acaactatctttctcatactcacattatgtttttaatttctctct--attgctttaatttttgtgtcaatatctaattttccttgta 479  Q
    |||||| ||| |||||||||||||||||||||  | |||||||||  ||||||||| ||||||||||| || |||| |||| |||||    
T  149514 acaactttctctctcatactcacattatgtttcaactttctctctctattgctttagtttttgtgtcactacctaaatttctttgta 149428  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #37
Raw Score: 36; E-Value: 0.00000000005
Query Start/End: Original strand, 406 - 482
Target Start/End: Complemental strand, 31574958 - 31574880
Alignment:
Q  406 tctcatactcacattatgtttttaatttctctct--attgctttaatttttgtgtcaatatctaattttccttgtaaaa 482  Q
    ||||||||||||||||| |||||| |||||||||  |||||||| |||||||| ||||||  | |||||| ||||||||    
T  31574958 tctcatactcacattatatttttattttctctctctattgctttgatttttgtatcaatacatgattttctttgtaaaa 31574880  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #38
Raw Score: 36; E-Value: 0.00000000005
Query Start/End: Original strand, 450 - 509
Target Start/End: Original strand, 34616659 - 34616718
Alignment:
Q  450 tttttgtgtcaatatctaattttccttgtaaaattttggttgtttcaaaaattgtaatat 509  Q
    ||||||||||||||||| |||||| || ||||||||||||||| |||||| |||| ||||    
T  34616659 tttttgtgtcaatatctcattttctttataaaattttggttgtctcaaaagttgtcatat 34616718  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #39
Raw Score: 36; E-Value: 0.00000000005
Query Start/End: Original strand, 431 - 502
Target Start/End: Complemental strand, 38376482 - 38376411
Alignment:
Q  431 tttctctctattgctttaatttttgtgtcaatatctaattttccttgtaaaattttggttgtttcaaaaatt 502  Q
    |||||||||||| |||| ||||||||| || ||||| |||||| ||||||||||||| ||||  ||||||||    
T  38376482 tttctctctattactttgatttttgtgccactatctcattttctttgtaaaattttgattgtcacaaaaatt 38376411  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #40
Raw Score: 36; E-Value: 0.00000000005
Query Start/End: Original strand, 397 - 492
Target Start/End: Complemental strand, 49449189 - 49449094
Alignment:
Q  397 aactatctttctcatactcacattatgtttttaatttctctctattgctttaatttttgtgtcaatatctaattttccttgtaaaattttggttgt 492  Q
    |||| ||| |||||||| |||||||| |||| |||||| |||||||| |||  ||||||||  |||| || |||||| ||||||||||||| ||||    
T  49449189 aactttctatctcatacgcacattatcttttaaatttcactctattgttttggtttttgtgctaatacctcattttctttgtaaaattttgattgt 49449094  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #41
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 424 - 486
Target Start/End: Complemental strand, 11672122 - 11672060
Alignment:
Q  424 tttttaatttctctctattgctttaatttttgtgtcaatatctaattttccttgtaaaatttt 486  Q
    |||||| ||||||||||||||||| |||||||||||||||  | |||||| || |||||||||    
T  11672122 tttttactttctctctattgctttgatttttgtgtcaataatttattttctttataaaatttt 11672060  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #42
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 395 - 490
Target Start/End: Original strand, 38134394 - 38134491
Alignment:
Q  395 acaactatctttctcatactcacattatgtttttaatttc--tctctattgctttaatttttgtgtcaatatctaattttccttgtaaaattttggtt 490  Q
    |||||| ||||||||||||| ||||||| |||||| ||||  ||||||||| |||  ||||||||||| |  || |||| | ||||||||||||||||    
T  38134394 acaactttctttctcatacttacattatctttttactttctttctctattgttttggtttttgtgtcactgcctcatttcctttgtaaaattttggtt 38134491  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #43
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 395 - 481
Target Start/End: Original strand, 52223224 - 52223310
Alignment:
Q  395 acaactatctttctcatactcacattatgtttttaatttctctctattgctttaatttttgtgtcaatatctaattttccttgtaaa 481  Q
    |||||| || || ||||||||||| |||||||||| ||||||| ||||| |||  ||||||| |||||| || |||||| |||||||    
T  52223224 acaactttcattttcatactcacaatatgtttttactttctctgtattgttttggtttttgtatcaatacctcattttctttgtaaa 52223310  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #44
Raw Score: 34; E-Value: 0.0000000007
Query Start/End: Original strand, 402 - 472
Target Start/End: Complemental strand, 1816698 - 1816626
Alignment:
Q  402 tctttctcatactcacattatgtttttaattt--ctctctattgctttaatttttgtgtcaatatctaatttt 472  Q
    ||||||||||||||| |||||  ||||| |||  |||||||||||||| |||||||||||| || ||||||||    
T  1816698 tctttctcatactcatattatcattttactttatctctctattgctttgatttttgtgtcactacctaatttt 1816626  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #45
Raw Score: 34; E-Value: 0.0000000007
Query Start/End: Original strand, 395 - 497
Target Start/End: Original strand, 29891886 - 29891990
Alignment:
Q  395 acaactatctttctcatactcacattatgtttttaatttctc--tctattgctttaatttttgtgtcaatatctaattttccttgtaaaattttggttgt 492  Q
    |||||| ||| |||||||||||||||||||||||| ||||||  ||||||| |||  ||||| |||| ||| ||  ||||  |||||||||| |||||||    
T  29891886 acaactttctctctcatactcacattatgtttttagtttctctttctattgttttggtttttatgtctatacctctttttttttgtaaaattatggttgt 29891985  T
Q  493 ttcaa 497  Q
     ||||    
T  29891986 ctcaa 29891990  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #46
Raw Score: 34; E-Value: 0.0000000007
Query Start/End: Original strand, 395 - 504
Target Start/End: Original strand, 37060359 - 37060467
Alignment:
Q  395 acaactatctttctcatactcacattatgtttttaatttctctctattgctttaatttttgtgtcaatatctaattttccttgtaaaattttggttgttt 494  Q
    |||||| ||| ||||||| ||||||||| ||||||  ||||||||||||||||  || || |||||||||  | ||||| |||| |||||| |||||| |    
T  37060359 acaactttctctctcatattcacattatatttttaccttctctctattgctttggttcttatgtcaatattcatttttctttgt-aaatttaggttgtct 37060457  T
Q  495 caaaaattgt 504  Q
    ||||| ||||    
T  37060458 caaaagttgt 37060467  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #47
Raw Score: 34; E-Value: 0.0000000007
Query Start/End: Original strand, 397 - 487
Target Start/End: Original strand, 43175027 - 43175119
Alignment:
Q  397 aactatctttctcatactcacattatgtttttaatt--tctctctattgctttaatttttgtgtcaatatctaattttccttgtaaaattttg 487  Q
    |||| ||| ||||||||||||||||| |||||| ||  ||||||||| |||||  ||||||||||| || || |||| | |||||||||||||    
T  43175027 aactttctctctcatactcacattatttttttactttctctctctatggctttggtttttgtgtcactacctcatttcctttgtaaaattttg 43175119  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #48
Raw Score: 34; E-Value: 0.0000000007
Query Start/End: Original strand, 395 - 485
Target Start/End: Original strand, 51255788 - 51255880
Alignment:
Q  395 acaactatctttctcatactcacattatgtttttaatt--tctctctattgctttaatttttgtgtcaatatctaattttccttgtaaaattt 485  Q
    |||||| ||| |||||||||||||| ||  || || ||  ||||||||||||||| ||||||||| || ||||||| |||| |||||||||||    
T  51255788 acaactttctctctcatactcacatgattattctactttctctctctattgctttgatttttgtgccactatctaaatttctttgtaaaattt 51255880  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #49
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 395 - 439
Target Start/End: Original strand, 5249910 - 5249954
Alignment:
Q  395 acaactatctttctcatactcacattatgtttttaatttctctct 439  Q
    |||||| ||| |||||||||||||||||||||||| |||||||||    
T  5249910 acaactttctctctcatactcacattatgtttttactttctctct 5249954  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #50
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 408 - 461
Target Start/End: Original strand, 16019531 - 16019586
Alignment:
Q  408 tcatactcacattatgtttttaatttctc--tctattgctttaatttttgtgtcaa 461  Q
    ||||||||||||||| |||||| ||||||  ||||||||||| |||||||||||||    
T  16019531 tcatactcacattatatttttactttctctctctattgctttgatttttgtgtcaa 16019586  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #51
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 395 - 492
Target Start/End: Complemental strand, 23369362 - 23369263
Alignment:
Q  395 acaactatctttctcatactcacattatgtttttaattt--ctctctattgctttaatttttgtgtcaatatctaattttccttgtaaaattttggttgt 492  Q
    |||||| ||| |||| |||||||||||| |||||| |||  ||||||||||||||  |||||||| || || || |||| | |||||| |||||||||||    
T  23369362 acaactttctctctcttactcacattatctttttactttatctctctattgctttggtttttgtgccactacctcatttcctttgtaagattttggttgt 23369263  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #52
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 395 - 472
Target Start/End: Complemental strand, 28458406 - 28458328
Alignment:
Q  395 acaactatctttctcatactcacattatgtttttaattt--ctctctattgctttaatttttgtgtcaatatctaatttt 472  Q
    |||||| ||| ||||||||||||||||| |||||| |||  |||||||||||||| ||||| ||||||||| ||| ||||    
T  28458406 acaactttctctctcatactcacattat-tttttactttatctctctattgctttgattttcgtgtcaatacctactttt 28458328  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #53
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 395 - 492
Target Start/End: Complemental strand, 29531636 - 29531537
Alignment:
Q  395 acaactatctttctcatactcacattatgtttttaatttctct--ctattgctttaatttttgtgtcaatatctaattttccttgtaaaattttggttgt 492  Q
    |||||| ||| ||||||||||| ||||| |||||| ||| |||  |||||| |||  ||||||||||| || || |||| | ||||||||||||||||||    
T  29531636 acaactttctctctcatactcatattatctttttattttttctttctattgttttggtttttgtgtcactacctcatttcctttgtaaaattttggttgt 29531537  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #54
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 395 - 439
Target Start/End: Original strand, 42490950 - 42490994
Alignment:
Q  395 acaactatctttctcatactcacattatgtttttaatttctctct 439  Q
    |||||| ||| |||||||||||||||||||||||| |||||||||    
T  42490950 acaactttctctctcatactcacattatgtttttactttctctct 42490994  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #55
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 395 - 467
Target Start/End: Original strand, 4756454 - 4756528
Alignment:
Q  395 acaactatctttctcatactcacattatgtttttaatttctctc--tattgctttaatttttgtgtcaatatcta 467  Q
    |||||| |||||||||||||||| | ||||||| | ||||||||  ||||| |||| |||||||||||| |||||    
T  4756454 acaactttctttctcatactcacgtcatgttttaattttctctctttattgatttactttttgtgtcaagatcta 4756528  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #56
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 450 - 509
Target Start/End: Original strand, 38382419 - 38382478
Alignment:
Q  450 tttttgtgtcaatatctaattttccttgtaaaattttggttgtttcaaaaattgtaatat 509  Q
    |||||||||||||| || |||||| || ||||||||||||||| |||||| |||| ||||    
T  38382419 tttttgtgtcaatacctcattttctttataaaattttggttgtctcaaaagttgtcatat 38382478  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #57
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 395 - 487
Target Start/End: Original strand, 39195098 - 39195192
Alignment:
Q  395 acaactatctttctcatactcacattatgtttttaatttctctc--tattgctttaatttttgtgtcaatatctaattttccttgtaaaattttg 487  Q
    |||||| |||||  ||||||||||||||||| ||| ||||||||  |||||||||  ||| |||| |||| ||| |||||| |||||||| ||||    
T  39195098 acaactttcttttacatactcacattatgttgttactttctctctatattgctttggtttgtgtgccaatctctcattttctttgtaaaactttg 39195192  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #58
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 395 - 482
Target Start/End: Original strand, 47015049 - 47015136
Alignment:
Q  395 acaactatctttctcatactcacattatgtttttaatttctctctattgctttaatttttgtgtcaatatctaattttccttgtaaaa 482  Q
    |||||| ||| | ||||||||||| ||| | |||| |||||||||||||||||  |||||||| |||||  || ||||| ||||||||    
T  47015049 acaactttctctttcatactcacaatatatctttattttctctctattgctttggtttttgtgccaatagatacttttctttgtaaaa 47015136  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #59
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 450 - 509
Target Start/End: Original strand, 47181939 - 47181998
Alignment:
Q  450 tttttgtgtcaatatctaattttccttgtaaaattttggttgtttcaaaaattgtaatat 509  Q
    |||||||||||||| || |||||| || ||||||||||||||| |||||| |||| ||||    
T  47181939 tttttgtgtcaatacctcattttctttataaaattttggttgtctcaaaagttgtcatat 47181998  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #60
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 450 - 509
Target Start/End: Complemental strand, 48402170 - 48402111
Alignment:
Q  450 tttttgtgtcaatatctaattttccttgtaaaattttggttgtttcaaaaattgtaatat 509  Q
    |||||||||||||| || |||||| || ||||||||||||||| |||||| |||| ||||    
T  48402170 tttttgtgtcaatacctcattttctttataaaattttggttgtctcaaaagttgtcatat 48402111  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #61
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 395 - 463
Target Start/End: Complemental strand, 50890103 - 50890033
Alignment:
Q  395 acaactatctttctcatactcacattatgtttttaatt--tctctctattgctttaatttttgtgtcaata 463  Q
    |||||| ||| ||||||||||||||||| |||||  ||  ||||||||||||||| ||||||||| |||||    
T  50890103 acaactttctctctcatactcacattatatttttgctttctctctctattgctttgatttttgtgccaata 50890033  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #62
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 406 - 504
Target Start/End: Original strand, 26492061 - 26492159
Alignment:
Q  406 tctcatactcacattatgtttttaatttctctctattgctttaatttttgtgtcaatatctaattttccttgtaaaattttggttgtttcaaaaattgt 504  Q
    ||||||| ||| ||||| ||||||  ||||||||||||||||  |||||||| || ||  | |||| | ||||||||||||| ||||  ||||||||||    
T  26492061 tctcatattcagattatctttttatcttctctctattgctttggtttttgtgccactacttcatttcctttgtaaaattttgattgtcacaaaaattgt 26492159  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #63
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 406 - 509
Target Start/End: Complemental strand, 27354373 - 27354268
Alignment:
Q  406 tctcatactcacattatgttttta--atttctctctattgctttaatttttgtgtcaatatctaattttccttgtaaaattttggttgtttcaaaaattg 503  Q
    ||||||||||||||||||||||||   |||||||| |||| ||| ||||||||  ||||   | |||||  |||||||||||||||||| | |||| |||    
T  27354373 tctcatactcacattatgtttttactttttctctcaattgttttgatttttgtaccaatccttcattttttttgtaaaattttggttgtcttaaaatttg 27354274  T
Q  504 taatat 509  Q
    | ||||    
T  27354273 tcatat 27354268  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #64
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 395 - 502
Target Start/End: Complemental strand, 38338951 - 38338843
Alignment:
Q  395 acaactatctttctcatactcacattatgtttttaattt--ctctctattgctttaatttttgtgtcaatatctaattttccttgtaaaattttggttgt 492  Q
    |||||| ||| ||||||||||||||||  |||||| |||  |||||||||||||| |||||||||  |||| ||| |||| |||   ||||| |||||||    
T  38338951 acaactttctctctcatactcacattac-tttttactttatctctctattgctttgatttttgtgcaaatacctattttttctttataaattatggttgt 38338853  T
Q  493 ttcaaaaatt 502  Q
    | ||||||||    
T  38338852 tccaaaaatt 38338843  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #65
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 395 - 481
Target Start/End: Original strand, 41849732 - 41849821
Alignment:
Q  395 acaactatctttctcatactcacattatgtttttaatttct--ctctattgcttt-aatttttgtgtcaatatctaattttccttgtaaa 481  Q
    |||||| ||| | |||||||||||||||||||||| |||||  ||||||||||||   ||||||||||||||| |  ||||| |||||||    
T  41849732 acaactttctctttcatactcacattatgtttttactttcttcctctattgctttggttttttgtgtcaatatttctttttctttgtaaa 41849821  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #66
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 408 - 499
Target Start/End: Complemental strand, 45257166 - 45257073
Alignment:
Q  408 tcatactcacattatgtttttaatt--tctctctattgctttaatttttgtgtcaatatctaattttccttgtaaaattttggttgtttcaaaa 499  Q
    ||||||||| |||||||||||||||  ||| |||||| ||||  ||||||||| |||||||  || |  || ||||||||||||||| ||||||    
T  45257166 tcatactcatattatgtttttaattactctttctattactttggtttttgtgttaatatctttttctttttttaaaattttggttgtctcaaaa 45257073  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #67
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 395 - 485
Target Start/End: Complemental strand, 5932793 - 5932701
Alignment:
Q  395 acaactatctttctcatactcacattatgtttttaatttctct--ctattgctttaatttttgtgtcaatatctaattttccttgtaaaattt 485  Q
    |||||| ||| |||||||||||||||||  ||||| | |||||  |||||| ||| |||||||||||| || |||| |||| ||||| |||||    
T  5932793 acaactttctctctcatactcacattatccttttagtgtctctatctattgttttgatttttgtgtcactacctaaatttctttgtataattt 5932701  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #68
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 408 - 494
Target Start/End: Complemental strand, 12387682 - 12387594
Alignment:
Q  408 tcatactcacattatgtttttaatttctctct--attgctttaatttttgtgtcaatatctaattttccttgtaaaattttggttgttt 494  Q
    ||||| ||||||||| |||||| ||| |||||  |||| ||| ||||||||||||||| || |||||| |||||||  | |||||||||    
T  12387682 tcataatcacattatatttttactttgtctctttattgttttgatttttgtgtcaatacctcattttctttgtaaatatatggttgttt 12387594  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #69
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 395 - 485
Target Start/End: Original strand, 18315979 - 18316071
Alignment:
Q  395 acaactatctttctcatactcacattatgtttttaatttctct--ctattgctttaatttttgtgtcaatatctaattttccttgtaaaattt 485  Q
    |||||| ||| ||| |||||||||| ||  ||||| |||||||  |||||||||| |||||||||||| || |||| |||| ||||| |||||    
T  18315979 acaactttctctcttatactcacatcatcattttactttctctttctattgctttgatttttgtgtcactacctaaatttctttgtataattt 18316071  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #70
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 406 - 492
Target Start/End: Complemental strand, 24575870 - 24575782
Alignment:
Q  406 tctcatactcacattatgtttttaatttctctct--attgctttaatttttgtgtcaatatctaattttccttgtaaaattttggttgt 492  Q
    ||||||||| ||||| | |||||| |||||||||  ||||||||  |||||||| ||||| || |||| | || |||||||||||||||    
T  24575870 tctcatacttacattgtctttttactttctctctctattgctttggtttttgtgccaatacctcatttcctttataaaattttggttgt 24575782  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #71
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 406 - 499
Target Start/End: Complemental strand, 26724988 - 26724896
Alignment:
Q  406 tctcatactcacattatgtttttaatttctctctattgctttaatttttgtgtcaatatctaattttccttgtaaaattttggttgtttcaaaa 499  Q
    |||| ||||||| |||| |||||| || |||||||||| |||  ||||||||||| || || |||| | |||||||||||| |||||| |||||    
T  26724988 tctcttactcacgttatctttttactt-ctctctattgttttggtttttgtgtcactacctcatttcctttgtaaaattttagttgttacaaaa 26724896  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #72
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 406 - 439
Target Start/End: Original strand, 31657971 - 31658004
Alignment:
Q  406 tctcatactcacattatgtttttaatttctctct 439  Q
    |||||||||||||||||||||||| |||||||||    
T  31657971 tctcatactcacattatgtttttattttctctct 31658004  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #73
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 406 - 456
Target Start/End: Complemental strand, 38381095 - 38381043
Alignment:
Q  406 tctcatactcacattatgtttttaatt--tctctctattgctttaatttttgt 456  Q
    ||||||||| |||||||||||||| ||  ||||||||||||||| ||||||||    
T  38381095 tctcatacttacattatgtttttattttctctctctattgctttgatttttgt 38381043  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #74
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 395 - 485
Target Start/End: Original strand, 38519835 - 38519927
Alignment:
Q  395 acaactatctttctcatactcacattatgtttttaatt--tctctctattgctttaatttttgtgtcaatatctaattttccttgtaaaattt 485  Q
    |||||| ||| |||||||||||||| ||  || || ||  ||||||||||||||| ||||||||| || ||| ||| |||| |||||||||||    
T  38519835 acaactttctctctcatactcacatgattattctactttctctctctattgctttgatttttgtgccactatttaaatttctttgtaaaattt 38519927  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #75
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 395 - 492
Target Start/End: Original strand, 40590642 - 40590739
Alignment:
Q  395 acaactatctttctcatactcacattatgtttttaatttctctctattgctttaatttttgtgtcaatatctaattttccttgtaaaattttggttgt 492  Q
    |||||| ||| ||||||| ||| ||||||||||||  || ||||||||  |||  ||| ||| |||||||||||||||| || |||| || |||||||    
T  40590642 acaactttctgtctcatattcatattatgtttttatcttttctctattattttggtttctgtatcaatatctaattttctttataaatttatggttgt 40590739  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #76
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 395 - 485
Target Start/End: Original strand, 54000740 - 54000832
Alignment:
Q  395 acaactatctttctcatactcacattatgtttttaatt--tctctctattgctttaatttttgtgtcaatatctaattttccttgtaaaattt 485  Q
    |||||| ||| |||||||||||||||||  ||||| ||  |||||||||||||| ||||| |||| || || |||| |||| ||||| |||||    
T  54000740 acaactttctctctcatactcacattatcattttactttctctctctattgcttaaatttgtgtgccactacctaaatttctttgtataattt 54000832  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #77
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 451 - 504
Target Start/End: Complemental strand, 56364017 - 56363964
Alignment:
Q  451 ttttgtgtcaatatctaattttccttgtaaaattttggttgtttcaaaaattgt 504  Q
    ||||||||||||| || |||||| || ||||||||||||||| |||||| ||||    
T  56364017 ttttgtgtcaatacctcattttctttataaaattttggttgtctcaaaagttgt 56363964  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #78
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 406 - 447
Target Start/End: Original strand, 56557786 - 56557827
Alignment:
Q  406 tctcatactcacattatgtttttaatttctctctattgcttt 447  Q
    ||||||||||||||| ||||||||  ||||||||||||||||    
T  56557786 tctcatactcacattgtgtttttaccttctctctattgcttt 56557827  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #79
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 395 - 439
Target Start/End: Original strand, 1031796 - 1031840
Alignment:
Q  395 acaactatctttctcatactcacattatgtttttaatttctctct 439  Q
    |||||| ||| |||||||||||||||||||||||| | |||||||    
T  1031796 acaactttctctctcatactcacattatgtttttattctctctct 1031840  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #80
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 395 - 439
Target Start/End: Original strand, 2109473 - 2109517
Alignment:
Q  395 acaactatctttctcatactcacattatgtttttaatttctctct 439  Q
    |||||| ||| | |||||||||||||||||||||| |||||||||    
T  2109473 acaactttctctttcatactcacattatgtttttactttctctct 2109517  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #81
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 365 - 463
Target Start/End: Original strand, 4974111 - 4974211
Alignment:
Q  365 gagaaatgatatatgtccaactannnnnnnacaactatctttctcatactcacattatgtttttaatttct--ctctattgctttaatttttgtgtcaat 462  Q
    |||||||||||| ||| ||||||       |||||| ||| |||||||| |||||||  |||||| |||||  |||||||||||||| |||| |||||||    
T  4974111 gagaaatgatatttgtacaactattttttaacaactttctctctcatacccacattaaatttttactttctttctctattgctttaacttttatgtcaat 4974210  T
Q  463 a 463  Q
    |    
T  4974211 a 4974211  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #82
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 395 - 439
Target Start/End: Original strand, 15596437 - 15596481
Alignment:
Q  395 acaactatctttctcatactcacattatgtttttaatttctctct 439  Q
    |||||| ||| |||||||||||||||||||||||| | |||||||    
T  15596437 acaactctctctctcatactcacattatgtttttattctctctct 15596481  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #83
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 397 - 462
Target Start/End: Original strand, 32223975 - 32224042
Alignment:
Q  397 aactatctttctcatactcacattatgtttttaattt--ctctctattgctttaatttttgtgtcaat 462  Q
    |||| ||||||||||||| ||||||| |||||| |||  |||||||||  ||||||||||||| ||||    
T  32223975 aactttctttctcatacttacattatatttttacttttactctctattattttaatttttgtgccaat 32224042  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #84
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 395 - 439
Target Start/End: Original strand, 34537971 - 34538015
Alignment:
Q  395 acaactatctttctcatactcacattatgtttttaatttctctct 439  Q
    |||||| ||| |||||||||||||||||||||||| | |||||||    
T  34537971 acaactttctctctcatactcacattatgtttttattctctctct 34538015  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #85
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 395 - 439
Target Start/End: Original strand, 40983187 - 40983231
Alignment:
Q  395 acaactatctttctcatactcacattatgtttttaatttctctct 439  Q
    |||||| ||| | |||||||||||||||||||||| |||||||||    
T  40983187 acaactctctctttcatactcacattatgtttttattttctctct 40983231  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #86
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 395 - 439
Target Start/End: Complemental strand, 44257759 - 44257715
Alignment:
Q  395 acaactatctttctcatactcacattatgtttttaatttctctct 439  Q
    |||||| ||| ||||||||||||||||| |||||| |||||||||    
T  44257759 acaactttctctctcatactcacattatatttttactttctctct 44257715  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #87
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 406 - 499
Target Start/End: Original strand, 46213022 - 46213117
Alignment:
Q  406 tctcatactcacattatgtttttaattt--ctctctattgctttaatttttgtgtcaatatctaattttccttgtaaaattttggttgtttcaaaa 499  Q
    |||| |||||||||||| |||||| |||  |||||| |||||||  ||||||||  | || || |||| | ||||||||||||||||||| |||||    
T  46213022 tctcgtactcacattatctttttactttttctctctgttgctttggtttttgtgcaactacctcatttcctttgtaaaattttggttgttacaaaa 46213117  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #88
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 395 - 439
Target Start/End: Original strand, 49585036 - 49585080
Alignment:
Q  395 acaactatctttctcatactcacattatgtttttaatttctctct 439  Q
    |||||| ||| ||||||||||||||||| |||||| |||||||||    
T  49585036 acaactttctctctcatactcacattatatttttactttctctct 49585080  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3 (Bit Score: 58; Significance: 4e-24; HSPs: 81)
Name: chr3
Description:

Target: chr3; HSP #1
Raw Score: 58; E-Value: 4e-24
Query Start/End: Original strand, 395 - 492
Target Start/End: Complemental strand, 44413950 - 44413853
Alignment:
Q  395 acaactatctttctcatactcacattatgtttttaatttctctctattgctttaatttttgtgtcaatatctaattttccttgtaaaattttggttgt 492  Q
    |||||| ||| ||||||||||||||||| ||||||  ||||||||||||||||  ||||||||||||||||| |||||| ||||||||||||| ||||    
T  44413950 acaactttctctctcatactcacattatctttttaccttctctctattgctttggtttttgtgtcaatatctcattttctttgtaaaattttgattgt 44413853  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #2
Raw Score: 52; E-Value: 1e-20
Query Start/End: Original strand, 406 - 481
Target Start/End: Complemental strand, 32587814 - 32587739
Alignment:
Q  406 tctcatactcacattatgtttttaatttctctctattgctttaatttttgtgtcaatatctaattttccttgtaaa 481  Q
    ||||||||||||||||||||||||||||||||||||||||||  |||||||| |||||| | |||||| |||||||    
T  32587814 tctcatactcacattatgtttttaatttctctctattgctttggtttttgtgccaatatttcattttctttgtaaa 32587739  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #3
Raw Score: 49; E-Value: 8e-19
Query Start/End: Original strand, 395 - 492
Target Start/End: Complemental strand, 35377111 - 35377012
Alignment:
Q  395 acaactatctttctcatactcacattatgtttttaatttct--ctctattgctttaatttttgtgtcaatatctaattttccttgtaaaattttggttgt 492  Q
    |||||| ||| ||||| |||||||||||||||||| |||||  |||||||||||| ||||||||| |||||  | |||||| ||||||||||||||||||    
T  35377111 acaactttctctctcacactcacattatgtttttactttctttctctattgctttgatttttgtgccaatacatcattttctttgtaaaattttggttgt 35377012  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #4
Raw Score: 49; E-Value: 8e-19
Query Start/End: Original strand, 408 - 509
Target Start/End: Original strand, 51982153 - 51982256
Alignment:
Q  408 tcatactcacattatgtttttaatttctc--tctattgctttaatttttgtgtcaatatctaattttccttgtaaaattttggttgtttcaaaaattgta 505  Q
    ||||||| | |||||||||||| ||||||  |||||||||||| |||||||||||||| || |||||| || ||||||||| ||||| |||||||||||     
T  51982153 tcatacttatattatgtttttactttctctctctattgctttagtttttgtgtcaataccttattttctttataaaattttagttgtctcaaaaattgtt 51982252  T
Q  506 atat 509  Q
    ||||    
T  51982253 atat 51982256  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #5
Raw Score: 48; E-Value: 3e-18
Query Start/End: Original strand, 397 - 456
Target Start/End: Original strand, 47742328 - 47742387
Alignment:
Q  397 aactatctttctcatactcacattatgtttttaatttctctctattgctttaatttttgt 456  Q
    |||| ||||||||||||||| ||||| |||||||||||||||||||||||||||||||||    
T  47742328 aactttctttctcatactcatattatatttttaatttctctctattgctttaatttttgt 47742387  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #6
Raw Score: 47; E-Value: 1e-17
Query Start/End: Original strand, 406 - 504
Target Start/End: Complemental strand, 42357101 - 42357003
Alignment:
Q  406 tctcatactcacattatgtttttaatttctctctattgctttaatttttgtgtcaatatctaattttccttgtaaaattttggttgtttcaaaaattgt 504  Q
    |||||||||||||| || |||||| | |||||||||||||||  ||||||||||| || || |||| | ||||||||||||||||||  ||||||||||    
T  42357101 tctcatactcacatgatctttttactctctctctattgctttggtttttgtgtcactacctcatttcctttgtaaaattttggttgtcacaaaaattgt 42357003  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #7
Raw Score: 45; E-Value: 2e-16
Query Start/End: Original strand, 395 - 492
Target Start/End: Original strand, 5114119 - 5114218
Alignment:
Q  395 acaactatctttctcatactcacattatgtttttaatttctc--tctattgctttaatttttgtgtcaatatctaattttccttgtaaaattttggttgt 492  Q
    |||||| ||| ||||| ||||||||||| |||||| ||||||  ||||||||||| |||||||||||| || || |||||| ||||||||||||| ||||    
T  5114119 acaactttctctctcacactcacattatctttttactttctctctctattgctttgatttttgtgtcactacctcattttctttgtaaaattttgattgt 5114218  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #8
Raw Score: 45; E-Value: 2e-16
Query Start/End: Original strand, 395 - 504
Target Start/End: Original strand, 5244270 - 5244381
Alignment:
Q  395 acaactatctttctcatactcacattatgtttttaatttctc--tctattgctttaatttttgtgtcaatatctaattttccttgtaaaattttggttgt 492  Q
    |||||| ||| ||||||||||||||||| |||||| ||||||  |||||||||||  |||||||| || || || |||| | ||||||||||||||||||    
T  5244270 acaactttctctctcatactcacattatttttttactttctctctctattgctttggtttttgtgccactacctcatttcctttgtaaaattttggttgt 5244369  T
Q  493 ttcaaaaattgt 504  Q
      ||||||||||    
T  5244370 cacaaaaattgt 5244381  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #9
Raw Score: 45; E-Value: 2e-16
Query Start/End: Original strand, 395 - 492
Target Start/End: Original strand, 38926669 - 38926768
Alignment:
Q  395 acaactatctttctcatactcacattatgtttttaatttctc--tctattgctttaatttttgtgtcaatatctaattttccttgtaaaattttggttgt 492  Q
    |||||| ||| ||||||||||||||||| |||||| ||||||  |||||||||||  ||||||||||| || || |||| | ||||||||||||||||||    
T  38926669 acaactttctctctcatactcacattatctttttactttctctctctattgctttggtttttgtgtcactaccttatttcctttgtaaaattttggttgt 38926768  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #10
Raw Score: 45; E-Value: 2e-16
Query Start/End: Original strand, 395 - 492
Target Start/End: Original strand, 41505532 - 41505631
Alignment:
Q  395 acaactatctttctcatactcacattatgtttttaatttctc--tctattgctttaatttttgtgtcaatatctaattttccttgtaaaattttggttgt 492  Q
    |||||| ||| ||||||||||||||||| |||||| ||||||  |||||||||||  ||||||||||| || || |||| | ||||||||||||||||||    
T  41505532 acaactttctctctcatactcacattatctttttactttctctctctattgctttggtttttgtgtcactacctcatttcctttgtaaaattttggttgt 41505631  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #11
Raw Score: 45; E-Value: 2e-16
Query Start/End: Original strand, 395 - 492
Target Start/End: Complemental strand, 42358668 - 42358569
Alignment:
Q  395 acaactatctttctcatactcacattatgtttttaattt--ctctctattgctttaatttttgtgtcaatatctaattttccttgtaaaattttggttgt 492  Q
    |||||| ||| ||||||||||||||||| |||||| |||  |||||||||||||| ||||||||||||||| || |||| | ||| ||||||||| ||||    
T  42358668 acaactttctctctcatactcacattatctttttactttatctctctattgctttgatttttgtgtcaatacctcatttcctttgcaaaattttgattgt 42358569  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #12
Raw Score: 44; E-Value: 8e-16
Query Start/End: Original strand, 404 - 467
Target Start/End: Complemental strand, 1340200 - 1340137
Alignment:
Q  404 tttctcatactcacattatgtttttaatttctctctattgctttaatttttgtgtcaatatcta 467  Q
    ||||||||||||||||| |||||| | ||||||||||||||||| ||||||||||||| |||||    
T  1340200 tttctcatactcacattgtgttttcattttctctctattgctttgatttttgtgtcaagatcta 1340137  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #13
Raw Score: 44; E-Value: 8e-16
Query Start/End: Original strand, 408 - 492
Target Start/End: Complemental strand, 33791787 - 33791701
Alignment:
Q  408 tcatactcacattatgtttttaatttc--tctctattgctttaatttttgtgtcaatatctaattttccttgtaaaattttggttgt 492  Q
    |||||||||||||||||||||| ||||  ||||||||| ||| | ||||||||||||| || |||||| |||| |||||||||||||    
T  33791787 tcatactcacattatgtttttactttccctctctattgttttgacttttgtgtcaatacctcattttctttgtgaaattttggttgt 33791701  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #14
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 395 - 493
Target Start/End: Original strand, 288767 - 288867
Alignment:
Q  395 acaactatctttctcatactcacattatgtttttaatt--tctctctattgctttaatttttgtgtcaatatctaattttccttgtaaaattttggttgt 492  Q
    |||||| ||| ||||||||||||||||| |||||| ||  |||||||||||||||  ||||||||||| ||||| ||||   ||||||||||||| ||||    
T  288767 acaactttctctctcatactcacattatttttttactttctctctctattgctttggtttttgtgtcactatctcatttcttttgtaaaattttgattgt 288866  T
Q  493 t 493  Q
    |    
T  288867 t 288867  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #15
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 406 - 504
Target Start/End: Complemental strand, 45711458 - 45711358
Alignment:
Q  406 tctcatactcacattatgtttttaatttctctct--attgctttaatttttgtgtcaatatctaattttccttgtaaaattttggttgtttcaaaaattg 503  Q
    ||||||||||||||||| |||||| |||||||||  |||| |||  || |||||||||||  | |||||| ||||||||||||||||||| ||||| |||    
T  45711458 tctcatactcacattatctttttactttctctctctattgttttggttattgtgtcaatacttcattttctttgtaaaattttggttgttacaaaagttg 45711359  T
Q  504 t 504  Q
    |    
T  45711358 t 45711358  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #16
Raw Score: 41; E-Value: 0.00000000000005
Query Start/End: Original strand, 406 - 463
Target Start/End: Complemental strand, 6178444 - 6178385
Alignment:
Q  406 tctcatactcacattatgtttttaatt--tctctctattgctttaatttttgtgtcaata 463  Q
    |||||||||||||||||||||||| ||  ||||||||||||||| |||||||||||||||    
T  6178444 tctcatactcacattatgtttttactttctctctctattgctttgatttttgtgtcaata 6178385  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #17
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 409 - 509
Target Start/End: Complemental strand, 13348150 - 13348048
Alignment:
Q  409 catactcacattatgtttttaatttctctct--attgctttaatttttgtgtcaatatctaattttccttgtaaaattttggttgtttcaaaaattgtaa 506  Q
    |||||||||| ||||||||||  ||||||||  ||||||||  ||||||| |||||| || |||||| ||||||||||||||||||  ||||| |||| |    
T  13348150 catactcacaatatgtttttaccttctctctctattgctttggtttttgtatcaatacctcattttctttgtaaaattttggttgtcccaaaagttgtca 13348051  T
Q  507 tat 509  Q
    |||    
T  13348050 tat 13348048  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #18
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 397 - 485
Target Start/End: Original strand, 34456834 - 34456924
Alignment:
Q  397 aactatctttctcatactcacattatgtttttaatttctc--tctattgctttaatttttgtgtcaatatctaattttccttgtaaaattt 485  Q
    |||| ||| ||||||||||| ||||| |||||| ||||||  ||||||||||||||||||||| ||||| |||| |||| ||||| |||||    
T  34456834 aactttctctctcatactcatattatctttttactttctctctctattgctttaatttttgtgccaatacctaaatttctttgtataattt 34456924  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #19
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 408 - 492
Target Start/End: Complemental strand, 37503764 - 37503678
Alignment:
Q  408 tcatactcacattatgtttttaatttctct--ctattgctttaatttttgtgtcaatatctaattttccttgtaaaattttggttgt 492  Q
    ||||||||||||||  |||||| ||||| |  |||||||||| |||||||||||||||||| |||| | ||| ||||||||||||||    
T  37503764 tcatactcacattacttttttactttctttttctattgctttgatttttgtgtcaatatctcatttcctttgcaaaattttggttgt 37503678  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #20
Raw Score: 39; E-Value: 0.0000000000008
Query Start/End: Original strand, 406 - 492
Target Start/End: Original strand, 54007516 - 54007602
Alignment:
Q  406 tctcatactcacattatgtttttaatttctctctattgctttaatttttgtgtcaatatctaattttccttgtaaaattttggttgt 492  Q
    ||||||||||||||| | |||||| ||| ||||||||  ||| ||||||||||||||||||| ||||| || |||| || |||||||    
T  54007516 tctcatactcacattttatttttattttatctctattctttttatttttgtgtcaatatctatttttctttataaatttatggttgt 54007602  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #21
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 402 - 492
Target Start/End: Complemental strand, 12762712 - 12762620
Alignment:
Q  402 tctttctcatactcacattatgtttttaatttctctct--attgctttaatttttgtgtcaatatctaattttccttgtaaaattttggttgt 492  Q
    |||||||||| |||||| ||| |||||| |||||||||  ||| |||| ||||||||||||||| ||| ||||| ||||||| || |||||||    
T  12762712 tctttctcattctcacaatatatttttattttctctctttattactttgatttttgtgtcaataactatttttctttgtaaatttatggttgt 12762620  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #22
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 406 - 492
Target Start/End: Complemental strand, 20548009 - 20547921
Alignment:
Q  406 tctcatactcacattatgtttttaatttctctct--attgctttaatttttgtgtcaatatctaattttccttgtaaaattttggttgt 492  Q
    |||||||||||| |||| |||||| |||||||||  |||||||| ||||||||| || || || |||| | ||||||||||||||||||    
T  20548009 tctcatactcacgttatctttttactttctctctctattgctttgatttttgtgccactacctcatttcctttgtaaaattttggttgt 20547921  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #23
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 406 - 492
Target Start/End: Complemental strand, 27541521 - 27541433
Alignment:
Q  406 tctcatactcacattatgtttttaatttctctct--attgctttaatttttgtgtcaatatctaattttccttgtaaaattttggttgt 492  Q
    ||||||||||||||||| |||||| |||||||||  ||||||||  |||||||| || || || |||| | ||||||||||||||||||    
T  27541521 tctcatactcacattatctttttactttctctctctattgctttggtttttgtgccactacctcatttcctttgtaaaattttggttgt 27541433  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #24
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 397 - 487
Target Start/End: Original strand, 44463400 - 44463492
Alignment:
Q  397 aactatctttctcatactcacattatgtttttaatttctc--tctattgctttaatttttgtgtcaatatctaattttccttgtaaaattttg 487  Q
    |||| ||| ||||||||||||||||| |||||| ||||||  ||| || |||| |||||||| ||||||||  |||||| |||||||||||||    
T  44463400 aactttctctctcatactcacattatatttttattttctctttctgttactttgatttttgtatcaatatcacattttctttgtaaaattttg 44463492  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #25
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 409 - 504
Target Start/End: Complemental strand, 14226720 - 14226624
Alignment:
Q  409 catactcacattatgtttttaatttc-tctctattgctttaatttttgtgtcaatatctaattttccttgtaaaattttggttgtttcaaaaattgt 504  Q
    ||||||||| |||||| ||| ||||| ||||| ||| |||  ||||||||||||||| | |||||| ||||||||||||| |||| | |||||||||    
T  14226720 catactcaccttatgtgttttatttcctctctgttgttttggtttttgtgtcaatatttcattttctttgtaaaattttgattgtcttaaaaattgt 14226624  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #26
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 395 - 492
Target Start/End: Original strand, 35597203 - 35597302
Alignment:
Q  395 acaactatctttctcatactcacattatgtttttaatt--tctctctattgctttaatttttgtgtcaatatctaattttccttgtaaaattttggttgt 492  Q
    |||||| ||| ||||||||||||||||| |||||| ||  ||||||||||| |||  ||||||||||| || ||  ||| | ||||||||||||||||||    
T  35597203 acaactttctctctcatactcacattatttttttactttctctctctattgttttggtttttgtgtcactacctcgtttcctttgtaaaattttggttgt 35597302  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #27
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 433 - 509
Target Start/End: Complemental strand, 37057047 - 37056971
Alignment:
Q  433 tctctctattgctttaatttttgtgtcaatatctaattttccttgtaaaattttggttgtttcaaaaattgtaatat 509  Q
    ||||||||||| |||  |||||||||||||| || |||||| ||||||||| |||||||| |||||| |||| ||||    
T  37057047 tctctctattgtttttgtttttgtgtcaatacctcattttctttgtaaaatattggttgtctcaaaagttgtcatat 37056971  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #28
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 395 - 492
Target Start/End: Original strand, 49021753 - 49021852
Alignment:
Q  395 acaactatctttctcatactcacattatgtttttaatt--tctctctattgctttaatttttgtgtcaatatctaattttccttgtaaaattttggttgt 492  Q
    |||||| ||||||||||||||||||||| |||||| ||  |||||| |||||||| ||||||||| ||| |  || ||||| |||||||| | |||||||    
T  49021753 acaactttctttctcatactcacattatatttttattttgtctctcaattgctttgatttttgtgccaacacatacttttctttgtaaaaatatggttgt 49021852  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #29
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 406 - 463
Target Start/End: Original strand, 50314677 - 50314736
Alignment:
Q  406 tctcatactcacattatgtttttaatt--tctctctattgctttaatttttgtgtcaata 463  Q
    |||||||||||||||||||||||| ||  |||||||||| |||| |||||||||||||||    
T  50314677 tctcatactcacattatgtttttactttctctctctattactttgatttttgtgtcaata 50314736  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #30
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 395 - 484
Target Start/End: Complemental strand, 50876392 - 50876301
Alignment:
Q  395 acaactatctttctcatactcacattatgtttttaatttctct--ctattgctttaatttttgtgtcaatatctaattttccttgtaaaatt 484  Q
    |||||| ||| | ||||||||| |||||||||||| |||||||  |||||||||| |||||||| |||||| ||  ||||| ||||||||||    
T  50876392 acaactttctctatcatactcatattatgtttttattttctctttctattgctttgatttttgtatcaatacctctttttctttgtaaaatt 50876301  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #31
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 395 - 504
Target Start/End: Complemental strand, 52254168 - 52254057
Alignment:
Q  395 acaactatctttctcatactcacattatgtttttaatttctctct--attgctttaatttttgtgtcaatatctaattttccttgtaaaattttggttgt 492  Q
    |||||| ||| |||||||||| |||| | |||||| |||||||||  ||||||||  ||||||||||| || || |||| | |||||||||||| |||||    
T  52254168 acaactttctctctcatactcgcattgtctttttactttctctctctattgctttggtttttgtgtcactacctcatttcctttgtaaaattttagttgt 52254069  T
Q  493 ttcaaaaattgt 504  Q
      ||||||||||    
T  52254068 cacaaaaattgt 52254057  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #32
Raw Score: 36; E-Value: 0.00000000005
Query Start/End: Original strand, 418 - 473
Target Start/End: Complemental strand, 35299879 - 35299824
Alignment:
Q  418 attatgtttttaatttctctctattgctttaatttttgtgtcaatatctaattttc 473  Q
    ||||| |||||| ||||||||||||||||| ||||||||||||||| || ||||||    
T  35299879 attatatttttattttctctctattgctttgatttttgtgtcaatacctcattttc 35299824  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #33
Raw Score: 36; E-Value: 0.00000000005
Query Start/End: Original strand, 406 - 490
Target Start/End: Complemental strand, 39629857 - 39629771
Alignment:
Q  406 tctcatactcacattatgtttttaatt--tctctctattgctttaatttttgtgtcaatatctaattttccttgtaaaattttggtt 490  Q
    |||||||||||||||||||||||| ||  ||||||||||| ||| |||||| ||||||||  |  ||||| || |||||||||||||    
T  39629857 tctcatactcacattatgtttttactttctctctctattgttttgatttttatgtcaataatttcttttctttataaaattttggtt 39629771  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #34
Raw Score: 36; E-Value: 0.00000000005
Query Start/End: Original strand, 433 - 492
Target Start/End: Original strand, 41309198 - 41309257
Alignment:
Q  433 tctctctattgctttaatttttgtgtcaatatctaattttccttgtaaaattttggttgt 492  Q
    ||||||||||||||| |||||||||||| || || |||||| ||||||||||||| ||||    
T  41309198 tctctctattgctttgatttttgtgtcactacctcattttctttgtaaaattttgattgt 41309257  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #35
Raw Score: 36; E-Value: 0.00000000005
Query Start/End: Original strand, 395 - 463
Target Start/End: Complemental strand, 48176880 - 48176810
Alignment:
Q  395 acaactatctttctcatactcacattatgtttttaatt--tctctctattgctttaatttttgtgtcaata 463  Q
    |||||| ||||||||||||||||||||| |||||| ||  ||||| | ||||||||||||| |||||||||    
T  48176880 acaactttctttctcatactcacattatatttttactttatctcttttttgctttaattttcgtgtcaata 48176810  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #36
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 397 - 504
Target Start/End: Original strand, 19149033 - 19149142
Alignment:
Q  397 aactatctttctcatactcacattatgtttttaatttctctc--tattgctttaatttttgtgtcaatatctaattttccttgtaaaattttggttgttt 494  Q
    |||| ||| ||||||||||||||||| |||||| ||||||||  ||||| |||  |||||||| || || || |||| | ||||||||||||| ||||      
T  19149033 aactttctctctcatactcacattatctttttactttctctctttattgttttggtttttgtgccactaactcatttcctttgtaaaattttgattgtca 19149132  T
Q  495 caaaaattgt 504  Q
    ||||||||||    
T  19149133 caaaaattgt 19149142  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #37
Raw Score: 34; E-Value: 0.0000000007
Query Start/End: Original strand, 408 - 509
Target Start/End: Complemental strand, 11630765 - 11630664
Alignment:
Q  408 tcatactcacattatgtttttaatttctctctattgctttaatttttgtgtcaatatctaattttccttgtaaaattttggttgtttcaaaaattgtaat 507  Q
    ||||||||  ||||| |||||| |||||||||||| ||||  ||||| | ||||||  | |||||| ||||||||||||  |||| ||||||||||| ||    
T  11630765 tcatactcttattatatttttactttctctctattactttggtttttatatcaatacttcattttctttgtaaaattttaattgtctcaaaaattgtcat 11630666  T
Q  508 at 509  Q
    ||    
T  11630665 at 11630664  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #38
Raw Score: 34; E-Value: 0.0000000007
Query Start/End: Original strand, 406 - 492
Target Start/End: Complemental strand, 36671033 - 36670945
Alignment:
Q  406 tctcatactcacattatgtttttaattt--ctctctattgctttaatttttgtgtcaatatctaattttccttgtaaaattttggttgt 492  Q
    ||||||||||||||||| |||||| |||  ||||||||||||||  |||||||| || || || ||||   ||||||||||||||||||    
T  36671033 tctcatactcacattatctttttactttttctctctattgctttggtttttgtgccactacctcatttcatttgtaaaattttggttgt 36670945  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #39
Raw Score: 34; E-Value: 0.0000000007
Query Start/End: Original strand, 406 - 492
Target Start/End: Complemental strand, 36756069 - 36755981
Alignment:
Q  406 tctcatactcacattatgtttttaatttctctct--attgctttaatttttgtgtcaatatctaattttccttgtaaaattttggttgt 492  Q
    |||||||||| |||||| |||||| |||||||||  |||||||| ||||||||| ||| || || ||||| |||||||| | |||||||    
T  36756069 tctcatactcgcattatatttttattttctctctctattgctttgatttttgtgccaacatatacttttctttgtaaaaatatggttgt 36755981  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #40
Raw Score: 34; E-Value: 0.0000000007
Query Start/End: Original strand, 395 - 481
Target Start/End: Complemental strand, 46966130 - 46966042
Alignment:
Q  395 acaactatctttctcatactcacattatgtttttaatttctc--tctattgctttaatttttgtgtcaatatctaattttccttgtaaa 481  Q
    |||||| |||||||||||||||| ||||||||||| ||||||  ||||||| |||  |||| ||||| |||||||  |||| |||||||    
T  46966130 acaactttctttctcatactcacgttatgtttttactttctctatctattgttttggttttcgtgtcgatatctatctttctttgtaaa 46966042  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #41
Raw Score: 34; E-Value: 0.0000000007
Query Start/End: Original strand, 406 - 492
Target Start/End: Original strand, 52939703 - 52939791
Alignment:
Q  406 tctcatactcacattatgtttttaatttctc--tctattgctttaatttttgtgtcaatatctaattttccttgtaaaattttggttgt 492  Q
    |||||||||||||| || |||||| ||||||  |||||||||||  |||||||| || || || |||| | ||||||||||||||||||    
T  52939703 tctcatactcacatgatctttttactttctctctctattgctttggtttttgtgccactacctcatttcctttgtaaaattttggttgt 52939791  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #42
Raw Score: 34; E-Value: 0.0000000007
Query Start/End: Original strand, 395 - 481
Target Start/End: Complemental strand, 55361263 - 55361175
Alignment:
Q  395 acaactatctttctcatactcacattatgtttttaatttctctct--attgctttaatttttgtgtcaatatctaattttccttgtaaa 481  Q
    |||||| ||| ||| ||||||||||||| |||||| |||||||||  ||||||||  ||||||||||||||  | |||||| |||||||    
T  55361263 acaactttctctcttatactcacattatttttttactttctctctctattgctttggtttttgtgtcaatacttcattttctttgtaaa 55361175  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #43
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 395 - 460
Target Start/End: Original strand, 13735170 - 13735237
Alignment:
Q  395 acaactatctttctcatactcacattatgtttttaatttc--tctctattgctttaatttttgtgtca 460  Q
    |||||| ||||||||||||||| ||||| |||||| ||||  |||||||||||||  |||||||||||    
T  13735170 acaactttctttctcatactcatattatctttttattttctttctctattgctttggtttttgtgtca 13735237  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #44
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 395 - 492
Target Start/End: Complemental strand, 16969596 - 16969497
Alignment:
Q  395 acaactatctttctcatactcacattatgtttttaatttctc--tctattgctttaatttttgtgtcaatatctaattttccttgtaaaattttggttgt 492  Q
    |||||| ||| ||||||||||||||||| |||||| ||||||  ||||||| ||| |||||| || || || || |||| | |||||||||||| |||||    
T  16969596 acaactttctctctcatactcacattatctttttactttctctttctattgttttgatttttatgccactacctcatttcctttgtaaaattttagttgt 16969497  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #45
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 395 - 492
Target Start/End: Original strand, 26014853 - 26014952
Alignment:
Q  395 acaactatctttctcatactcacattatgtttttaatt--tctctctattgctttaatttttgtgtcaatatctaattttccttgtaaaattttggttgt 492  Q
    |||||| ||| ||||||||||||||||| |||||| ||  ||||||||||| |||  |||||||| |  || || |||| | ||||||||||||||||||    
T  26014853 acaactttctctctcatactcacattatctttttactttctctctctattgttttggtttttgtgcccttacctcatttcctttgtaaaattttggttgt 26014952  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #46
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 395 - 492
Target Start/End: Original strand, 27511766 - 27511865
Alignment:
Q  395 acaactatctttctcatactcacattatgtttttaatttc--tctctattgctttaatttttgtgtcaatatctaattttccttgtaaaattttggttgt 492  Q
    |||||| ||| |||||||||||| ||||||||| | ||||  ||||||||| |||  |||  ||||||||||||| ||||| ||||||| || |||||||    
T  27511766 acaactttctctctcatactcacgttatgttttcactttcactctctattgttttggtttccgtgtcaatatctacttttctttgtaaatttatggttgt 27511865  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #47
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 406 - 463
Target Start/End: Original strand, 28700513 - 28700572
Alignment:
Q  406 tctcatactcacattatgtttttaatt--tctctctattgctttaatttttgtgtcaata 463  Q
    |||||||||||||||||||||||| ||  |||||||||||||||  |||||||| |||||    
T  28700513 tctcatactcacattatgtttttactttctctctctattgctttggtttttgtgccaata 28700572  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #48
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 432 - 504
Target Start/End: Original strand, 42889065 - 42889137
Alignment:
Q  432 ttctctctattgctttaatttttgtgtcaatatctaattttccttgtaaaattttggttgtttcaaaaattgt 504  Q
    |||||||| |||||||  |||||||| ||||| || |||||| |||||||||||||||| | |||||| ||||    
T  42889065 ttctctctgttgctttggtttttgtgccaataactcattttctttgtaaaattttggttatatcaaaagttgt 42889137  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #49
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 407 - 492
Target Start/End: Original strand, 44856006 - 44856093
Alignment:
Q  407 ctcatactcacattatgtttttaatttctctct--attgctttaatttttgtgtcaatatctaattttccttgtaaaattttggttgt 492  Q
    |||||||||||||||  |||||| |||||||||  ||| |||| ||||||||| || || || |||| | ||||||||||||||||||    
T  44856006 ctcatactcacattacctttttactttctctctctatttctttgatttttgtgccactacctcatttcctttgtaaaattttggttgt 44856093  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #50
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 395 - 492
Target Start/End: Original strand, 46623948 - 46624047
Alignment:
Q  395 acaactatctttctcatactcacattatgtttttaatttctct--ctattgctttaatttttgtgtcaatatctaattttccttgtaaaattttggttgt 492  Q
    |||||| ||| ||| ||| ||||||||| |||||| |||||||  |||||| |||  ||||||||||| || || |||||| ||||||||||||| ||||    
T  46623948 acaactttctctctgatattcacattatctttttactttctctttctattgttttggtttttgtgtcactacctcattttctttgtaaaattttgattgt 46624047  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #51
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 395 - 492
Target Start/End: Original strand, 47472370 - 47472469
Alignment:
Q  395 acaactatctttctcatactcacattatgtttttaatt--tctctctattgctttaatttttgtgtcaatatctaattttccttgtaaaattttggttgt 492  Q
    |||||| ||| ||||||||||| ||||| |||||| ||  ||||||| ||| |||| |||||||| || || || |||| | ||||||||||||||||||    
T  47472370 acaactttctctctcatactcatattatctttttactttctctctctgttgttttagtttttgtgccactacctcatttcctttgtaaaattttggttgt 47472469  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #52
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 395 - 439
Target Start/End: Original strand, 48405452 - 48405496
Alignment:
Q  395 acaactatctttctcatactcacattatgtttttaatttctctct 439  Q
    |||||| ||| |||||||||||||||||||||||| |||||||||    
T  48405452 acaactttctctctcatactcacattatgtttttactttctctct 48405496  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #53
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 450 - 498
Target Start/End: Complemental strand, 49087080 - 49087032
Alignment:
Q  450 tttttgtgtcaatatctaattttccttgtaaaattttggttgtttcaaa 498  Q
    |||||||||||||| || |||||| ||| ||||||||||||||||||||    
T  49087080 tttttgtgtcaatacctcattttctttgaaaaattttggttgtttcaaa 49087032  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #54
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 395 - 453
Target Start/End: Original strand, 17550181 - 17550240
Alignment:
Q  395 acaactatctttctcatactcacattatg-tttttaatttctctctattgctttaatttt 453  Q
    |||||| ||| ||||||||||||| |||| |||||| |||||||||||| ||||||||||    
T  17550181 acaactttctctctcatactcacactatgttttttactttctctctattactttaatttt 17550240  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #55
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 450 - 509
Target Start/End: Original strand, 21217610 - 21217669
Alignment:
Q  450 tttttgtgtcaatatctaattttccttgtaaaattttggttgtttcaaaaattgtaatat 509  Q
    |||||||||||||| || |||||| || ||||||||||||||| |||||| |||| ||||    
T  21217610 tttttgtgtcaatacctcattttctttataaaattttggttgtctcaaaagttgtcatat 21217669  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #56
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 450 - 509
Target Start/End: Original strand, 23592556 - 23592615
Alignment:
Q  450 tttttgtgtcaatatctaattttccttgtaaaattttggttgtttcaaaaattgtaatat 509  Q
    |||||||||||||| || |||||| || ||||||||||||||| |||||| |||| ||||    
T  23592556 tttttgtgtcaatacctcattttctttataaaattttggttgtctcaaaagttgtcatat 23592615  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #57
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 402 - 490
Target Start/End: Complemental strand, 28539763 - 28539673
Alignment:
Q  402 tctttctcatactcacattatgtttttaatt--tctctctattgctttaatttttgtgtcaatatctaattttccttgtaaaattttggtt 490  Q
    ||||||||| ||||| |||||||||||| ||  ||||||||||||||| | ||||||| ||| |  | |||||| ||| ||||||||||||    
T  28539763 tctttctcacactcatattatgtttttactttctctctctattgctttgacttttgtgccaaaacatcattttctttgcaaaattttggtt 28539673  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #58
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 406 - 481
Target Start/End: Complemental strand, 52564666 - 52564591
Alignment:
Q  406 tctcatactcacattatgtttttaatttctctctattgctttaatttttgtgtcaatatctaattttccttgtaaa 481  Q
    |||||||||||||||||||||||| ||  |||| ||||||||  |||| ||| ||||| ||| ||||| |||||||    
T  52564666 tctcatactcacattatgtttttacttcttctccattgctttggttttagtgccaatacctacttttctttgtaaa 52564591  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #59
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 395 - 482
Target Start/End: Complemental strand, 26452752 - 26452663
Alignment:
Q  395 acaactatctttctcatactcacattatgtttttaatt--tctctctattgctttaatttttgtgtcaatatctaattttccttgtaaaa 482  Q
    |||||| ||| ||||||||||||||||| |||||| ||  ||||||||||||||| ||||   ||||||||  | |||||| ||||||||    
T  26452752 acaactttctctctcatactcacattatatttttactttctctctctattgctttgatttccctgtcaatacatgattttctttgtaaaa 26452663  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #60
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 407 - 486
Target Start/End: Complemental strand, 44413413 - 44413332
Alignment:
Q  407 ctcatactcacattatgtttttaatttctctc--tattgctttaatttttgtgtcaatatctaattttccttgtaaaatttt 486  Q
    |||||||||||||||| |||||| ||||||||  ||||||||   |||||||| ||||| || |||| | ||||||||||||    
T  44413413 ctcatactcacattatctttttactttctctctttattgcttcggtttttgtgccaatacctcatttcctttgtaaaatttt 44413332  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #61
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 397 - 492
Target Start/End: Original strand, 52714777 - 52714874
Alignment:
Q  397 aactatctttctcatactcacattatgtttttaatttctc--tctattgctttaatttttgtgtcaatatctaattttccttgtaaaattttggttgt 492  Q
    |||| ||| ||||||||| ||||||| |||||| ||||||  ||||||||||| ||||||||| ||| |  || ||||| |||||||| | |||||||    
T  52714777 aactttctctctcatacttacattatatttttactttctctctctattgctttgatttttgtgccaacacatacttttctttgtaaaaatatggttgt 52714874  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #62
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 406 - 463
Target Start/End: Original strand, 3648632 - 3648689
Alignment:
Q  406 tctcatactcacattatgtttttaatttctctctattgctttaatttttgtgtcaata 463  Q
    ||||||| ||||||| | |||||| ||| ||||||||| ||| |||||||||||||||    
T  3648632 tctcatattcacattgtatttttactttatctctattgttttgatttttgtgtcaata 3648689  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #63
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 395 - 485
Target Start/End: Complemental strand, 4494266 - 4494174
Alignment:
Q  395 acaactatctttctcatactcacattatgtttttaatttctct--ctattgctttaatttttgtgtcaatatctaattttccttgtaaaattt 485  Q
    |||||| ||| ||| |||||||||| ||  ||||| |||||||  |||||||||| |||||||||||| || |||| |||| ||||| |||||    
T  4494266 acaactttctctcttatactcacatcatcattttactttctctttctattgctttgatttttgtgtcactacctaaatttctttgtataattt 4494174  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #64
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 410 - 492
Target Start/End: Complemental strand, 7668202 - 7668119
Alignment:
Q  410 atactcacattatgtttttaatt--tctctctattgctttaatttttgtgtcaatatctaattttccttgtaaaattttggttgt 492  Q
    ||||||||||||| |||||| ||  |||||||||||||||  ||||| || || ||||| | |||||||| ||||||||||||||    
T  7668202 atactcacattatctttttactttctctctctattgctttggtttttatgccactatctta-tttccttgcaaaattttggttgt 7668119  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #65
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 397 - 487
Target Start/End: Original strand, 8847153 - 8847245
Alignment:
Q  397 aactatctttctcatactcacattatgttttta--atttctctctattgctttaatttttgtgtcaatatctaattttccttgtaaaattttg 487  Q
    |||| ||| ||||||||||||||||| ||||||   ||||| ||||||| |||  |||||||| ||||| || |||||  |||||||||||||    
T  8847153 aactttctctctcatactcacattatttttttactttttctttctattgttttggtttttgtgccaatacctcattttatttgtaaaattttg 8847245  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #66
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 395 - 457
Target Start/End: Complemental strand, 14207287 - 14207223
Alignment:
Q  395 acaactatctttctcatactcacattatgtttttaatt--tctctctattgctttaatttttgtg 457  Q
    |||||| ||| ||||||||||||||||||| || | ||  ||||||||||||||| |||||||||    
T  14207287 acaactttctctctcatactcacattatgtcttcattttctctctctattgctttgatttttgtg 14207223  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #67
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 395 - 457
Target Start/End: Complemental strand, 14215035 - 14214971
Alignment:
Q  395 acaactatctttctcatactcacattatgtttttaatt--tctctctattgctttaatttttgtg 457  Q
    |||||| ||| ||||||||||||||||||| || | ||  ||||||||||||||| |||||||||    
T  14215035 acaactttctctctcatactcacattatgtcttcattttctctctctattgctttgatttttgtg 14214971  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #68
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 395 - 492
Target Start/End: Complemental strand, 29573385 - 29573286
Alignment:
Q  395 acaactatctttctcatactcacattatgtttttaattt--ctctctattgctttaatttttgtgtcaatatctaattttcc-ttgtaaaattttggttg 491  Q
    |||||| ||| |||||||||||||| ||||||||| |||  |||||||||||||| ||||| ||| ||| | ||| |||||| ||||||| || ||||||    
T  29573385 acaactttctctctcatactcacat-atgtttttactttatctctctattgctttgattttcgtgccaaaacctacttttcctttgtaaatttatggttg 29573287  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #69
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 406 - 439
Target Start/End: Complemental strand, 30805622 - 30805589
Alignment:
Q  406 tctcatactcacattatgtttttaatttctctct 439  Q
    |||||||||||||||||||||||| |||||||||    
T  30805622 tctcatactcacattatgtttttattttctctct 30805589  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #70
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 395 - 439
Target Start/End: Complemental strand, 7294129 - 7294085
Alignment:
Q  395 acaactatctttctcatactcacattatgtttttaatttctctct 439  Q
    |||||| ||| |||||||||||||||||||||||| | |||||||    
T  7294129 acaactttctctctcatactcacattatgtttttattctctctct 7294085  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #71
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 395 - 439
Target Start/End: Complemental strand, 9557952 - 9557908
Alignment:
Q  395 acaactatctttctcatactcacattatgtttttaatttctctct 439  Q
    |||||| ||| |||||||||||||||||||||||| | |||||||    
T  9557952 acaactttctctctcatactcacattatgtttttattctctctct 9557908  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #72
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 395 - 439
Target Start/End: Original strand, 16295505 - 16295549
Alignment:
Q  395 acaactatctttctcatactcacattatgtttttaatttctctct 439  Q
    |||||| ||| ||||||||||||||||| |||||| |||||||||    
T  16295505 acaactttctctctcatactcacattatatttttattttctctct 16295549  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #73
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 433 - 485
Target Start/End: Complemental strand, 32145975 - 32145923
Alignment:
Q  433 tctctctattgctttaatttttgtgtcaatatctaattttccttgtaaaattt 485  Q
    ||||||||||| ||| |||||||||||| || |||| |||| |||||||||||    
T  32145975 tctctctattgttttgatttttgtgtcactacctaaatttctttgtaaaattt 32145923  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #74
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 397 - 509
Target Start/End: Original strand, 33374536 - 33374650
Alignment:
Q  397 aactatctttctcatactcacattatgtttttaatttctc--tcta-ttgctttaatttttgtgtcaatatctaattttccttgtaaaattttggttgtt 493  Q
    |||| ||| ||||||||||||||||| |||| | ||||||  |||| |||| || ||||||||||||| |||| || ||||||   | ||||||||||||    
T  33374536 aactttctctctcatactcacattatattttcattttctctttctatttgcgttgatttttgtgtcaagatct-atattcctttatatattttggttgtt 33374634  T
Q  494 tcaaaaattgtaatat 509  Q
    ||| ||||||| ||||    
T  33374635 tcacaaattgtcatat 33374650  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #75
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 433 - 481
Target Start/End: Original strand, 34532270 - 34532318
Alignment:
Q  433 tctctctattgctttaatttttgtgtcaatatctaattttccttgtaaa 481  Q
    ||||| |||||||||||||||||| ||||| |||| ||||| |||||||    
T  34532270 tctctttattgctttaatttttgtatcaatgtctacttttctttgtaaa 34532318  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #76
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 449 - 509
Target Start/End: Original strand, 44383286 - 44383346
Alignment:
Q  449 atttttgtgtcaatatctaattttccttgtaaaattttggttgtttcaaaaattgtaatat 509  Q
    ||||||||||||||| || |||||| || |||||||||| |||| |||||| |||| ||||    
T  44383286 atttttgtgtcaatacctcattttctttataaaattttgattgtctcaaaagttgtcatat 44383346  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #77
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 406 - 463
Target Start/End: Complemental strand, 44813466 - 44813407
Alignment:
Q  406 tctcatactcacattatgtttttaatt--tctctctattgctttaatttttgtgtcaata 463  Q
    ||||||||||||||||| |||||| ||  |||||||||||||||  |||| |||||||||    
T  44813466 tctcatactcacattatatttttactttatctctctattgctttggttttcgtgtcaata 44813407  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #78
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 395 - 456
Target Start/End: Original strand, 48353038 - 48353101
Alignment:
Q  395 acaactatctttctcatactcacattatgtttttaatt--tctctctattgctttaatttttgt 456  Q
    |||||| ||| ||||||||||| ||||| |||||| ||  ||||||||||||||| ||||||||    
T  48353038 acaactttctctctcatactcatattatatttttactttctctctctattgctttgatttttgt 48353101  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #79
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 395 - 492
Target Start/End: Complemental strand, 49761216 - 49761117
Alignment:
Q  395 acaactatctttctcatactcacattatgtttttaatttctc--tctattgctttaatttttgtgtcaatatctaattttccttgtaaaattttggttgt 492  Q
    |||||| ||| ||||| ||||||||||| |||||| ||||||  |||||| |||| || |||||| |||||  || ||||| |||||||| | |||||||    
T  49761216 acaactttctctctcacactcacattatatttttactttctctttctattactttgatatttgtgccaatacatatttttctttgtaaaaatgtggttgt 49761117  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #80
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 395 - 492
Target Start/End: Original strand, 52485514 - 52485613
Alignment:
Q  395 acaactatctttctcatactcacattatgtttttaatt--tctctctattgctttaatttttgtgtcaatatctaattttccttgtaaaattttggttgt 492  Q
    |||||| ||| | ||||||||||||||| |||||| ||  |||||||||||||||  |||| ||| |||||  || ||||| |||||||| | |||||||    
T  52485514 acaactttctctgtcatactcacattatatttttactttatctctctattgctttggttttcgtgccaatacatacttttctttgtaaaaatatggttgt 52485613  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #81
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 395 - 439
Target Start/End: Complemental strand, 55322746 - 55322702
Alignment:
Q  395 acaactatctttctcatactcacattatgtttttaatttctctct 439  Q
    |||||| ||| || ||||||||||||||||||||| |||||||||    
T  55322746 acaactttctctcccatactcacattatgtttttactttctctct 55322702  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1 (Bit Score: 57; Significance: 1e-23; HSPs: 86)
Name: chr1
Description:

Target: chr1; HSP #1
Raw Score: 57; E-Value: 1e-23
Query Start/End: Original strand, 406 - 502
Target Start/End: Original strand, 30570578 - 30570674
Alignment:
Q  406 tctcatactcacattatgtttttaatttctctctattgctttaatttttgtgtcaatatctaattttccttgtaaaattttggttgtttcaaaaatt 502  Q
    |||||||||||||||||||||||| ||||||||||||| ||| |||||||||  |||||||   |||| ||||||||||||| ||||||||||||||    
T  30570578 tctcatactcacattatgtttttactttctctctattgttttgatttttgtgctaatatctcgatttctttgtaaaattttgattgtttcaaaaatt 30570674  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #2
Raw Score: 54; E-Value: 9e-22
Query Start/End: Original strand, 395 - 509
Target Start/End: Complemental strand, 9566990 - 9566874
Alignment:
Q  395 acaactatctttctcatactcacattatgtttttaatttctc--tctattgctttaatttttgtgtcaatatctaattttccttgtaaaattttggttgt 492  Q
    |||||| ||| |||||||||||||||||||||||| ||||||  |||||||||||  |||||||||||||| |  ||||||  |||||||||||||||||    
T  9566990 acaactttctctctcatactcacattatgtttttactttctcactctattgctttggtttttgtgtcaataccctattttctatgtaaaattttggttgt 9566891  T
Q  493 ttcaaaaattgtaatat 509  Q
     |||||| |||| ||||    
T  9566890 ctcaaaagttgtcatat 9566874  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #3
Raw Score: 50; E-Value: 2e-19
Query Start/End: Original strand, 395 - 492
Target Start/End: Original strand, 29359680 - 29359777
Alignment:
Q  395 acaactatctttctcatactcacattatgtttttaatttctctctattgctttaatttttgtgtcaatatctaattttccttgtaaaattttggttgt 492  Q
    |||||| ||| ||||||||||||||||| |||||| |||||||||||||||||  |||||||| || ||  | |||||| ||||||||||||||||||    
T  29359680 acaactttctctctcatactcacattatctttttactttctctctattgctttggtttttgtgccattacatcattttctttgtaaaattttggttgt 29359777  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #4
Raw Score: 49; E-Value: 8e-19
Query Start/End: Original strand, 395 - 463
Target Start/End: Original strand, 36954699 - 36954767
Alignment:
Q  395 acaactatctttctcatactcacattatgtttttaatttctctctattgctttaatttttgtgtcaata 463  Q
    |||||| |||||||||||||||||||||||||||| ||||||||| |||||||| || |||||||||||    
T  36954699 acaactttctttctcatactcacattatgtttttactttctctctcttgctttagttgttgtgtcaata 36954767  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #5
Raw Score: 49; E-Value: 8e-19
Query Start/End: Original strand, 395 - 492
Target Start/End: Original strand, 37619585 - 37619684
Alignment:
Q  395 acaactatctttctcatactcacattatgtttttaatt--tctctctattgctttaatttttgtgtcaatatctaattttccttgtaaaattttggttgt 492  Q
    |||||| ||| ||||||||||||||||| |||||||||  |||||||||||| || ||||||||| ||||| || |||| | ||||||||||||||||||    
T  37619585 acaactttctctctcatactcacattatctttttaatttctctctctattgcgttgatttttgtgccaatacctcatttcctttgtaaaattttggttgt 37619684  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #6
Raw Score: 49; E-Value: 8e-19
Query Start/End: Original strand, 395 - 492
Target Start/End: Original strand, 43775247 - 43775346
Alignment:
Q  395 acaactatctttctcatactcacattatgtttttaatttctc--tctattgctttaatttttgtgtcaatatctaattttccttgtaaaattttggttgt 492  Q
    |||||| |||||||||||||| |||||| |||||| ||||||  ||||||| |||| ||||||| ||||||||| |||||| ||||||||||||| ||||    
T  43775247 acaactttctttctcatactcgcattatctttttactttctctctctattgttttagtttttgtatcaatatctcattttctttgtaaaattttgattgt 43775346  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #7
Raw Score: 48; E-Value: 3e-18
Query Start/End: Original strand, 395 - 486
Target Start/End: Original strand, 37685372 - 37685463
Alignment:
Q  395 acaactatctttctcatactcacattatgtttttaatttctctctattgctttaatttttgtgtcaatatctaattttccttgtaaaatttt 486  Q
    |||||| ||| ||||||||||||||||| |||||| ||||||||||||||||| |||||||||||| || || ||||   ||||||||||||    
T  37685372 acaactttctctctcatactcacattatctttttactttctctctattgctttgatttttgtgtcactacctcatttcttttgtaaaatttt 37685463  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #8
Raw Score: 48; E-Value: 3e-18
Query Start/End: Original strand, 395 - 486
Target Start/End: Complemental strand, 37700146 - 37700055
Alignment:
Q  395 acaactatctttctcatactcacattatgtttttaatttctctctattgctttaatttttgtgtcaatatctaattttccttgtaaaatttt 486  Q
    |||||| ||| ||||||||||||||||| |||||| ||||||||||||||||| |||||||||||| || || ||||   ||||||||||||    
T  37700146 acaactttctctctcatactcacattatctttttactttctctctattgctttgatttttgtgtcactacctcatttcttttgtaaaatttt 37700055  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #9
Raw Score: 47; E-Value: 1e-17
Query Start/End: Original strand, 406 - 492
Target Start/End: Original strand, 50932358 - 50932444
Alignment:
Q  406 tctcatactcacattatgtttttaatttctctctattgctttaatttttgtgtcaatatctaattttccttgtaaaattttggttgt 492  Q
    |||||||||||||| || |||||| | ||| ||||||||||| ||||||||||||||| || |||| | ||||||||||||||||||    
T  50932358 tctcatactcacataatctttttactctctttctattgctttgatttttgtgtcaatacctcatttcctttgtaaaattttggttgt 50932444  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #10
Raw Score: 46; E-Value: 5e-17
Query Start/End: Original strand, 395 - 509
Target Start/End: Original strand, 9987993 - 9988109
Alignment:
Q  395 acaactatctttctcatactcacattatgtttttaatttctc--tctattgctttaatttttgtgtcaatatctaattttccttgtaaaattttggttgt 492  Q
    |||||| ||| | ||||||||||||||| |||||| ||||||  ||||||||||| ||||||||| ||||  || |||||  ||||||||||||||||||    
T  9987993 acaactttctctttcatactcacattatatttttactttctctctctattgctttgatttttgtgccaatcactcattttatttgtaaaattttggttgt 9988092  T
Q  493 ttcaaaaattgtaatat 509  Q
    | ||||  |||||||||    
T  9988093 tgcaaaggttgtaatat 9988109  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #11
Raw Score: 45; E-Value: 2e-16
Query Start/End: Original strand, 395 - 492
Target Start/End: Original strand, 649810 - 649909
Alignment:
Q  395 acaactatctttctcatactcacattatgtttttaatttctc--tctattgctttaatttttgtgtcaatatctaattttccttgtaaaattttggttgt 492  Q
    |||||| ||| ||||||||||||||||| |||||| ||||||  |||||||||||  ||||||||||| || || |||| | ||||||||||||||||||    
T  649810 acaactttctctctcatactcacattatctttttactttctctctctattgctttggtttttgtgtcactacctcatttcctttgtaaaattttggttgt 649909  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #12
Raw Score: 45; E-Value: 2e-16
Query Start/End: Original strand, 395 - 492
Target Start/End: Original strand, 14983814 - 14983913
Alignment:
Q  395 acaactatctttctcatactcacattatgtttttaatttctc--tctattgctttaatttttgtgtcaatatctaattttccttgtaaaattttggttgt 492  Q
    |||||| ||| ||||||| |||||||||||||||| ||||||  ||||||| |||| |||||||||||||||||  ||||| |||| ||||| |||||||    
T  14983814 acaactttctctctcatattcacattatgtttttactttctctctctattgttttagtttttgtgtcaatatctctttttctttgtgaaattatggttgt 14983913  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #13
Raw Score: 45; E-Value: 2e-16
Query Start/End: Original strand, 395 - 504
Target Start/End: Original strand, 31826992 - 31827103
Alignment:
Q  395 acaactatctttctcatactcacattatgtttttaa--tttctctctattgctttaatttttgtgtcaatatctaattttccttgtaaaattttggttgt 492  Q
    |||||| ||| |||||||||  |||||||||||||   ||||||||||||| |||  |||||||||||||| || |||||  ||||||||||||||||||    
T  31826992 acaactttctctctcatacttgcattatgtttttaccctttctctctattgatttggtttttgtgtcaataactcattttttttgtaaaattttggttgt 31827091  T
Q  493 ttcaaaaattgt 504  Q
     |||||| ||||    
T  31827092 atcaaaagttgt 31827103  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #14
Raw Score: 44; E-Value: 8e-16
Query Start/End: Original strand, 408 - 492
Target Start/End: Complemental strand, 27533501 - 27533415
Alignment:
Q  408 tcatactcacattatgtttttaatttctctct--attgctttaatttttgtgtcaatatctaattttccttgtaaaattttggttgt 492  Q
    ||||||||| |||||||||||| |||||||||  |||| ||| |||||| |||||||| || |||||| ||||||||||||||||||    
T  27533501 tcatactcatattatgtttttactttctctctttattgttttgatttttatgtcaatacctcattttctttgtaaaattttggttgt 27533415  T

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Target: chr1; HSP #15
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 395 - 504
Target Start/End: Original strand, 4466736 - 4466847
Alignment:
Q  395 acaactatctttctcatactcacattatgtttttaatttctc--tctattgctttaatttttgtgtcaatatctaattttcc-ttgtaaaattttggttg 491  Q
    |||||| ||| ||||||| | |||||||||||||| ||||||  | ||||||||| ||||||||||||||| | | |||||| |||||||||| ||||||    
T  4466736 acaactttctgtctcatatttacattatgtttttactttctctttttattgctttgatttttgtgtcaata-ccatttttcctttgtaaaattatggttg 4466834  T
Q  492 tttcaaaaattgt 504  Q
    || ||||||||||    
T  4466835 ttccaaaaattgt 4466847  T

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Target: chr1; HSP #16
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 395 - 492
Target Start/End: Complemental strand, 8350226 - 8350130
Alignment:
Q  395 acaactatctttctcatactcacattatgtttttaatttctctctattgctttaatttttgtgtcaatatctaattttccttgtaaaattttggttgt 492  Q
    |||||| ||| |||||||||||||| || |||||| |||||||||||||||||  ||||||||||| || || |||| | |||| |||||||||||||    
T  8350226 acaactttctctctcatactcacatgatctttttactttctctctattgctttggtttttgtgtcactaccttatttcctttgt-aaattttggttgt 8350130  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #17
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 395 - 485
Target Start/End: Complemental strand, 47642636 - 47642544
Alignment:
Q  395 acaactatctttctcatactcacattatgtttttaatttctct--ctattgctttaatttttgtgtcaatatctaattttccttgtaaaattt 485  Q
    |||||| ||| |||||||||||||||||  | ||| |||||||  ||||||||||||||||||||||| ||||||| |||| ||||| |||||    
T  47642636 acaactttctctctcatactcacattatcatattactttctctttctattgctttaatttttgtgtcactatctaaatttctttgtataattt 47642544  T

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Target: chr1; HSP #18
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 395 - 485
Target Start/End: Original strand, 48858865 - 48858957
Alignment:
Q  395 acaactatctttctcatactcacattatgtttttaatt--tctctctattgctttaatttttgtgtcaatatctaattttccttgtaaaattt 485  Q
    |||||| ||| |||||||||||||||||  ||||| ||  ||||||||||||||| |||||||||||| ||||||| |||| ||||| |||||    
T  48858865 acaactttctctctcatactcacattatcattttacttcctctctctattgctttgatttttgtgtcactatctaaatttctttgtataattt 48858957  T

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Target: chr1; HSP #19
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 408 - 490
Target Start/End: Complemental strand, 49065381 - 49065297
Alignment:
Q  408 tcatactcacattatgtttttaatttctctct--attgctttaatttttgtgtcaatatctaattttccttgtaaaattttggtt 490  Q
    |||||||||||||||||||||| |||||||||  ||||||||  |||||||| |||||  | |||||| ||||||||||||||||    
T  49065381 tcatactcacattatgtttttactttctctctctattgctttggtttttgtgccaatacttcattttctttgtaaaattttggtt 49065297  T

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Target: chr1; HSP #20
Raw Score: 41; E-Value: 0.00000000000005
Query Start/End: Original strand, 395 - 492
Target Start/End: Original strand, 33100849 - 33100948
Alignment:
Q  395 acaactatctttctcatactcacattatgtttttaatt--tctctctattgctttaatttttgtgtcaatatctaattttccttgtaaaattttggttgt 492  Q
    |||||| ||| ||||||||||||||||| |||||| ||  ||||||||||| ||| |||||||||||| || || |||| | || |||||||||||||||    
T  33100849 acaactttctctctcatactcacattatctttttactttctctctctattgttttgatttttgtgtcactacctcatttcctttataaaattttggttgt 33100948  T

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Target: chr1; HSP #21
Raw Score: 41; E-Value: 0.00000000000005
Query Start/End: Original strand, 395 - 492
Target Start/End: Original strand, 35369741 - 35369840
Alignment:
Q  395 acaactatctttctcatactcacattatgtttttaatttctc--tctattgctttaatttttgtgtcaatatctaattttccttgtaaaattttggttgt 492  Q
    |||||| ||| ||||||||||||||| | |||||| ||||||  ||||||||||| |||||||||||| || || |||| | || |||||||||||||||    
T  35369741 acaactttctatctcatactcacattgtctttttactttctctctctattgctttgatttttgtgtcactacctcatttcctttataaaattttggttgt 35369840  T

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Target: chr1; HSP #22
Raw Score: 41; E-Value: 0.00000000000005
Query Start/End: Original strand, 395 - 492
Target Start/End: Complemental strand, 50775186 - 50775087
Alignment:
Q  395 acaactatctttctcatactcacattatgtttttaatt--tctctctattgctttaatttttgtgtcaatatctaattttccttgtaaaattttggttgt 492  Q
    |||||| ||| |||||||||||||||||||||||| ||  |||||||||||||||  |||||||||||| |  |  ||||| |||||||||| |||||||    
T  50775186 acaactttctctctcatactcacattatgtttttactttatctctctattgctttggtttttgtgtcaacacatctttttctttgtaaaattatggttgt 50775087  T

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Target: chr1; HSP #23
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 397 - 456
Target Start/End: Original strand, 3558890 - 3558949
Alignment:
Q  397 aactatctttctcatactcacattatgtttttaatttctctctattgctttaatttttgt 456  Q
    |||| ||| |||||||||||||||||||||||| |||||||||||| ||||| |||||||    
T  3558890 aactttctctctcatactcacattatgtttttactttctctctattactttagtttttgt 3558949  T

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Target: chr1; HSP #24
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 406 - 509
Target Start/End: Complemental strand, 19947761 - 19947658
Alignment:
Q  406 tctcatactcacattatgtttttaatttctctctattgctttaatttttgtgtcaatatctaattttccttgtaaaattttggttgtttcaaaaattgta 505  Q
    |||| |||| |||||||| ||||| |||||||||||||||||  |||||||  ||||| ||  ||||| || ||||||||||||||| |||||| ||||     
T  19947761 tctcttacttacattatgcttttactttctctctattgctttggtttttgtcccaatacctccttttctttataaaattttggttgtctcaaaagttgtc 19947662  T
Q  506 atat 509  Q
    ||||    
T  19947661 atat 19947658  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #25
Raw Score: 39; E-Value: 0.0000000000008
Query Start/End: Original strand, 410 - 509
Target Start/End: Complemental strand, 2269587 - 2269486
Alignment:
Q  410 atactcacattatgtttttaatttctctct--attgctttaatttttgtgtcaatatctaattttccttgtaaaattttggttgtttcaaaaattgtaat 507  Q
    |||||||||||||||||||| |||||| ||  ||||||||  |||||||||||||| || ||||||    ||||||||||||||| |||||| |||| ||    
T  2269587 atactcacattatgtttttactttctcacttgattgctttggtttttgtgtcaataccttattttctaaataaaattttggttgtatcaaaagttgtcat 2269488  T
Q  508 at 509  Q
    ||    
T  2269487 at 2269486  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #26
Raw Score: 39; E-Value: 0.0000000000008
Query Start/End: Original strand, 395 - 502
Target Start/End: Complemental strand, 18512373 - 18512264
Alignment:
Q  395 acaactatctttctcatactcacattatgtttttaattt--ctctctattgctttaatttttgtgtcaatatctaattttccttgtaaaattttggttgt 492  Q
    |||||| ||| || |||||| ||| |||||||||| |||  ||||||||||||||| ||||| |||||||| || |||||| || ||||||||| |||||    
T  18512373 acaactttctatcacatacttacactatgtttttactttatctctctattgctttagtttttatgtcaatacctcattttctttataaaattttagttgt 18512274  T
Q  493 ttcaaaaatt 502  Q
     | |||||||    
T  18512273 cttaaaaatt 18512264  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #27
Raw Score: 39; E-Value: 0.0000000000008
Query Start/End: Original strand, 406 - 492
Target Start/End: Complemental strand, 49020422 - 49020336
Alignment:
Q  406 tctcatactcacattatgtttttaatttctctctattgctttaatttttgtgtcaatatctaattttccttgtaaaattttggttgt 492  Q
    ||||||||||||||||| |||||  ||||||||||||| |||  |||||||| |||||| || ||||| |||||||| | |||||||    
T  49020422 tctcatactcacattatattttttctttctctctattgttttggtttttgtgccaatatatatttttctttgtaaaaatatggttgt 49020336  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #28
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 406 - 492
Target Start/End: Original strand, 31088233 - 31088321
Alignment:
Q  406 tctcatactcacattatgtttttaatttctc--tctattgctttaatttttgtgtcaatatctaattttccttgtaaaattttggttgt 492  Q
    ||||||||||||||||| |||||| ||||||  |||||||||||  |||||||| || || || |||||  ||||||||||||||||||    
T  31088233 tctcatactcacattatctttttactttctctctctattgctttggtttttgtgccactacctcattttttttgtaaaattttggttgt 31088321  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #29
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 395 - 491
Target Start/End: Original strand, 45640342 - 45640440
Alignment:
Q  395 acaactatctttctcatactcacattatgtttttaattt---ctctctattgctttaatttttgtgtcaatatctaattttccttgtaaaattttggttg 491  Q
    |||||| ||| ||||||||||||||||| |||||   ||   |||||||||||||| ||||||||| |||||||| | |||| |||||||||||||||||    
T  45640342 acaactttctctctcatactcacattattttttttgctttatctctctattgctttgatttttgtgccaatatctca-tttctttgtaaaattttggttg 45640440  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #30
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 395 - 492
Target Start/End: Original strand, 18434836 - 18434935
Alignment:
Q  395 acaactatctttctcatactcacattatgtttttaatttctctc--tattgctttaatttttgtgtcaatatctaattttccttgtaaaattttggttgt 492  Q
    |||||| ||| ||||| | |||||||||||||||| ||||||||  ||||| ||| ||||||||| |||||  | |||||| ||| ||||||||||||||    
T  18434836 acaactttctctctcacattcacattatgtttttactttctctctttattgttttgatttttgtgccaatacatcattttctttgcaaaattttggttgt 18434935  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #31
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 395 - 492
Target Start/End: Complemental strand, 27465087 - 27464988
Alignment:
Q  395 acaactatctttctcatactcacattatgtttttaattt--ctctctattgctttaatttttgtgtcaatatctaattttccttgtaaaattttggttgt 492  Q
    |||||| ||| |||||||||||||| || |||||| |||  ||||||||||||||  |||||||| || || || |||| | ||||||||||||||||||    
T  27465087 acaactttctctctcatactcacatgatctttttactttgtctctctattgctttggtttttgtgccactacctcatttcctttgtaaaattttggttgt 27464988  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #32
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 395 - 492
Target Start/End: Original strand, 33076161 - 33076260
Alignment:
Q  395 acaactatctttctcatactcacattatgtttttaatt--tctctctattgctttaatttttgtgtcaatatctaattttccttgtaaaattttggttgt 492  Q
    |||||| ||| | ||||||||||||||| |||||| ||  |||||||||| |||| || |||||| |||||  |||||||| |||||||||| |||||||    
T  33076161 acaactttctctatcatactcacattatatttttattttctctctctattactttgatatttgtgccaatacataattttctttgtaaaattgtggttgt 33076260  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #33
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 407 - 492
Target Start/End: Complemental strand, 44914590 - 44914503
Alignment:
Q  407 ctcatactcacattatgtttttaatttctctct--attgctttaatttttgtgtcaatatctaattttccttgtaaaattttggttgt 492  Q
    |||| ||||||||||| |||||| |||||||||  ||||||||| ||||||||||| || || |||| | ||||||||||||| ||||    
T  44914590 ctcagactcacattatctttttattttctctctctattgctttagtttttgtgtcactacctcatttcctttgtaaaattttgattgt 44914503  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #34
Raw Score: 36; E-Value: 0.00000000005
Query Start/End: Original strand, 408 - 504
Target Start/End: Complemental strand, 10627827 - 10627729
Alignment:
Q  408 tcatactcacattatgtttttaattt--ctctctattgctttaatttttgtgtcaatatctaattttccttgtaaaattttggttgtttcaaaaattgt 504  Q
    ||||||||||||||| |||| | |||  |||||||||| ||| |||||||| |||||| |  |||||| || |||||||||| |||| |||||||||||    
T  10627827 tcatactcacattatattttcactttatctctctattgttttgatttttgtatcaataccacattttctttataaaattttgtttgtctcaaaaattgt 10627729  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #35
Raw Score: 36; E-Value: 0.00000000005
Query Start/End: Original strand, 395 - 499
Target Start/End: Complemental strand, 26021105 - 26021000
Alignment:
Q  395 acaactatctttctcatactcacattatgtttttaatttct--ctctattgctttaatttttgtgtcaatatctaattttccttgtaaaattttggttgt 492  Q
    |||||| ||| |||||||||||||| ||||||||| ||| |  |||||||| ||| ||| ||||||||||||||  ||||  ||||||||||||| ||||    
T  26021105 acaactttctctctcatactcacat-atgtttttactttatatctctattgatttgattattgtgtcaatatctctttttttttgtaaaattttgattgt 26021007  T
Q  493 ttcaaaa 499  Q
     ||||||    
T  26021006 ctcaaaa 26021000  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #36
Raw Score: 36; E-Value: 0.00000000005
Query Start/End: Original strand, 406 - 501
Target Start/End: Original strand, 37516577 - 37516672
Alignment:
Q  406 tctcatactcacattatgtttttaatttctctctattgctttaatttttgtgtcaatatctaattttccttgtaaaattttggttgtttcaaaaat 501  Q
    ||||||||||||||||| || ||| |||||||||||||||||  ||||  ||||| |||||| ||| | ||||||| |  |||||||| |||||||    
T  37516577 tctcatactcacattattttgttactttctctctattgctttggttttcatgtcactatctactttcctttgtaaattaatggttgttacaaaaat 37516672  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #37
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 395 - 461
Target Start/End: Original strand, 1689433 - 1689499
Alignment:
Q  395 acaactatctttctcatactcacattatgtttttaatttctctctattgctttaatttttgtgtcaa 461  Q
    |||||| ||| ||||||||||||||||| | |||| ||||| |||||| |||| |||||||||||||    
T  1689433 acaactttctctctcatactcacattatatatttactttctttctattactttgatttttgtgtcaa 1689499  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #38
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 450 - 504
Target Start/End: Original strand, 21401496 - 21401550
Alignment:
Q  450 tttttgtgtcaatatctaattttccttgtaaaattttggttgtttcaaaaattgt 504  Q
    |||||||||||||| || |||||| ||||||||||||| ||||||||||| ||||    
T  21401496 tttttgtgtcaatacctcattttctttgtaaaattttgattgtttcaaaagttgt 21401550  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #39
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 408 - 487
Target Start/End: Original strand, 25672396 - 25672477
Alignment:
Q  408 tcatactcacattatgtttttaatttctct--ctattgctttaatttttgtgtcaatatctaattttccttgtaaaattttg 487  Q
    ||||||| | |||||||||||| |||||||  ||||| ||||| ||||||||||||||  | |||||| |||||||||||||    
T  25672396 tcatacttatattatgtttttattttctctttctattactttagtttttgtgtcaatactttattttctttgtaaaattttg 25672477  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #40
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 395 - 457
Target Start/End: Original strand, 30536033 - 30536095
Alignment:
Q  395 acaactatctttctcatactcacattatgtttttaatttctctctattgctttaatttttgtg 457  Q
    |||||| ||| ||||||||||||||||| |||||| |||||||||||| |||| || ||||||    
T  30536033 acaactttctctctcatactcacattatatttttactttctctctattactttgatatttgtg 30536095  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #41
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 402 - 493
Target Start/End: Complemental strand, 43367924 - 43367831
Alignment:
Q  402 tctttctcatactcacattatgtttttaatt--tctctctattgctttaatttttgtgtcaatatctaattttccttgtaaaattttggttgtt 493  Q
    |||||||||||||||||||||||||||| ||  | ||| ||||| ||| ||||| |||| ||||| || ||||| ||||||| || ||||||||    
T  43367924 tctttctcatactcacattatgtttttacttactttctttattgatttgattttcgtgtaaatatttatttttctttgtaaatttatggttgtt 43367831  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #42
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 395 - 490
Target Start/End: Complemental strand, 44519181 - 44519084
Alignment:
Q  395 acaactatctttctcatactcacattatgtttttaatttctctct--attgctttaatttttgtgtcaatatctaattttccttgtaaaattttggtt 490  Q
    |||||| ||| ||| ||||| ||||||| |||||| |||||||||  |||||||| |||||||||  |||| || |||| | ||||||||||||||||    
T  44519181 acaactttctctcttatacttacattatctttttactttctctctctattgctttgatttttgtgctaatacctcatttcctttgtaaaattttggtt 44519084  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #43
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 421 - 504
Target Start/End: Complemental strand, 51571350 - 51571265
Alignment:
Q  421 atgtttttaatttctct--ctattgctttaatttttgtgtcaatatctaattttccttgtaaaattttggttgtttcaaaaattgt 504  Q
    ||||||||| |||||||  ||||||||||  |||||||||||||| ||  ||||| |||||||||| |||||||  ||||||||||    
T  51571350 atgtttttactttctctttctattgctttggtttttgtgtcaatacctctttttctttgtaaaattatggttgtcccaaaaattgt 51571265  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #44
Raw Score: 34; E-Value: 0.0000000007
Query Start/End: Original strand, 406 - 463
Target Start/End: Complemental strand, 1821122 - 1821065
Alignment:
Q  406 tctcatactcacattatgtttttaatttctctctattgctttaatttttgtgtcaata 463  Q
    ||||||||||||| ||| |||||| ||| ||||||| | |||||||||||||||||||    
T  1821122 tctcatactcacaatatatttttactttatctctatcgttttaatttttgtgtcaata 1821065  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #45
Raw Score: 34; E-Value: 0.0000000007
Query Start/End: Original strand, 406 - 492
Target Start/End: Original strand, 23645463 - 23645551
Alignment:
Q  406 tctcatactcacattatgtttttaatt--tctctctattgctttaatttttgtgtcaatatctaattttccttgtaaaattttggttgt 492  Q
    ||||||||||||||||| |||||| ||  ||||||||||| |||  |||||||| || || || |||| | ||||||||||||||||||    
T  23645463 tctcatactcacattatctttttactttctctctctattgttttggtttttgtgccactacctcatttcctttgtaaaattttggttgt 23645551  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #46
Raw Score: 34; E-Value: 0.0000000007
Query Start/End: Original strand, 395 - 485
Target Start/End: Complemental strand, 48983697 - 48983605
Alignment:
Q  395 acaactatctttctcatactcacattatgtttttaatttctct--ctattgctttaatttttgtgtcaatatctaattttccttgtaaaattt 485  Q
    |||||| ||| |||||||||||||| ||  || || |||||||  |||||||||| ||||||||| || ||||||| |||| |||||||||||    
T  48983697 acaactttctctctcatactcacatgattattctactttctctttctattgctttgatttttgtgccattatctaaatttctttgtaaaattt 48983605  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #47
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 395 - 492
Target Start/End: Original strand, 3851199 - 3851298
Alignment:
Q  395 acaactatctttctcatactcacattatgtttttaatt--tctctctattgctttaatttttgtgtcaatatctaattttccttgtaaaattttggttgt 492  Q
    |||||| ||| ||||||||||||||||| |||||| ||  ||||||||||| |||  ||||| ||||| || || |||| | || |||||||||||||||    
T  3851199 acaactttctctctcatactcacattatctttttacttgatctctctattgttttggtttttctgtcactacctcatttcctttataaaattttggttgt 3851298  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #48
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 395 - 492
Target Start/End: Complemental strand, 12999852 - 12999753
Alignment:
Q  395 acaactatctttctcatactcacattatgtttttaatttctc--tctattgctttaatttttgtgtcaatatctaattttccttgtaaaattttggttgt 492  Q
    |||||| ||| ||||||||||||||||| |||||| ||||||  |||||| |||| || |||||| |||||  || ||||| |||||||| | |||||||    
T  12999852 acaactttctctctcatactcacattatatttttactttctctttctattactttgatatttgtgccaatacatatttttctttgtaaaaatgtggttgt 12999753  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #49
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 395 - 492
Target Start/End: Complemental strand, 19055789 - 19055690
Alignment:
Q  395 acaactatctttctcatactcacattatgtttttaatttctctct--attgctttaatttttgtgtcaatatctaattttccttgtaaaattttggttgt 492  Q
    |||||| ||| ||| ||||||||||||  |||||| |||||||||  |||| |||  |||||||| |||||||| |||| | |||||||||||| |||||    
T  19055789 acaactttctctcttatactcacattacctttttactttctctctctattgttttggtttttgtgacaatatctcatttcctttgtaaaattttagttgt 19055690  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #50
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 395 - 492
Target Start/End: Complemental strand, 34818074 - 34817975
Alignment:
Q  395 acaactatctttctcatactcacattatgtttttaatttctc--tctattgctttaatttttgtgtcaatatctaattttccttgtaaaattttggttgt 492  Q
    |||||| ||| ||||||||||| ||||| |||||| ||||||  ||||||||||| ||||||||| ||| |  || ||||| |||||||| | |||||||    
T  34818074 acaactttctctctcatactcatattatatttttactttctctttctattgctttgatttttgtgccaacacatatttttctttgtaaaaatatggttgt 34817975  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #51
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 404 - 457
Target Start/End: Complemental strand, 37178211 - 37178156
Alignment:
Q  404 tttctcatactcacattatgtttttaatttctctct--attgctttaatttttgtg 457  Q
    |||||||||||||||| || |||||| |||||||||  ||||||||||||||||||    
T  37178211 tttctcatactcacatcatatttttattttctctctctattgctttaatttttgtg 37178156  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #52
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 416 - 500
Target Start/End: Original strand, 2556694 - 2556780
Alignment:
Q  416 acattatgtttttaatttct--ctctattgctttaatttttgtgtcaatatctaattttccttgtaaaattttggttgtttcaaaaa 500  Q
    ||||||||||||||||||||  |||||||| |||||||||||| ||| |||||  ||||| || |||| |  || ||||||||||||    
T  2556694 acattatgtttttaatttctttctctattgttttaatttttgtatcattatcttgttttctttttaaattaatgattgtttcaaaaa 2556780  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #53
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 433 - 492
Target Start/End: Complemental strand, 3982016 - 3981957
Alignment:
Q  433 tctctctattgctttaatttttgtgtcaatatctaattttccttgtaaaattttggttgt 492  Q
    ||||||||||| |||  || |||||||||||||| |||||| ||||||||||||| ||||    
T  3982016 tctctctattgttttggttattgtgtcaatatctcattttctttgtaaaattttgattgt 3981957  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #54
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 397 - 492
Target Start/End: Original strand, 12657265 - 12657363
Alignment:
Q  397 aactatctttctcatactcacattatgtttttaatttctc--tctattgctttaatttttgtgt-caatatctaattttccttgtaaaattttggttgt 492  Q
    |||| ||| ||||||||||||||||| |||||| ||||||  |||||||||||  ||||||||| || || || |||| | || |||||||||||||||    
T  12657265 aactttctctctcatactcacattatctttttactttctctttctattgctttggtttttgtgtccactacctcatttcctttataaaattttggttgt 12657363  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #55
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 413 - 509
Target Start/End: Complemental strand, 30467545 - 30467447
Alignment:
Q  413 ctcacattatgtttttaattt--ctctctattgctttaatttttgtgtcaatatctaattttccttgtaaaattttggttgtttcaaaaattgtaatat 509  Q
    ||||||||||||| ||| |||  |||||||||||||| |||| ||||||||| |||  ||||| |||||||| ||| |||||  ||||| |||| ||||    
T  30467545 ctcacattatgttgttactttttctctctattgctttgatttgtgtgtcaatctctcgttttctttgtaaaactttagttgtcacaaaagttgtcatat 30467447  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #56
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 408 - 492
Target Start/End: Complemental strand, 37275050 - 37274964
Alignment:
Q  408 tcatactcacattatgtttttaatttct--ctctattgctttaatttttgtgtcaatatctaattttccttgtaaaattttggttgt 492  Q
    ||||||||||||||| |||||| |||||  ||||||||||||  ||||||||||| || || |||| | ||| ||||||||| ||||    
T  37275050 tcatactcacattatctttttactttctttctctattgctttggtttttgtgtcactacctcatttcctttgcaaaattttgattgt 37274964  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #57
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 408 - 504
Target Start/End: Original strand, 48261194 - 48261292
Alignment:
Q  408 tcatactcacattatgtttttaatt--tctctctattgctttaatttttgtgtcaatatctaattttccttgtaaaattttggttgtttcaaaaattgt 504  Q
    |||||||||||||||||||||| ||  |||||||||||||||  |||||||| ||||| ||  ||| | |||||||| | || |||| |||||| ||||    
T  48261194 tcatactcacattatgtttttactttctctctctattgctttggtttttgtgccaatacctcttttcctttgtaaaaatatgattgtctcaaaagttgt 48261292  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #58
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 417 - 487
Target Start/End: Original strand, 6693222 - 6693292
Alignment:
Q  417 cattatgtttttaatttctctctattgctttaatttttgtgtcaatatctaattttccttgtaaaattttg 487  Q
    |||||| |||||| ||||||||||||| |||  ||||| |||||||| || |||| | |||||||||||||    
T  6693222 cattatttttttactttctctctattgttttggtttttatgtcaatacctcatttcctttgtaaaattttg 6693292  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #59
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 406 - 473
Target Start/End: Complemental strand, 6949999 - 6949930
Alignment:
Q  406 tctcatactcacattatgtttttaatttct--ctctattgctttaatttttgtgtcaatatctaattttc 473  Q
    ||||||||| ||||||||||||||||||||  ||||| ||||||  |||| || |||||||||| |||||    
T  6949999 tctcatacttacattatgtttttaatttctctctctactgctttgtttttcgtatcaatatctacttttc 6949930  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #60
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 406 - 504
Target Start/End: Complemental strand, 18639724 - 18639626
Alignment:
Q  406 tctcatactcacattatgtttttaatttctctctattgctttaatttttgtgtcaatatctaattttccttgtaaaattttggttgtttcaaaaattgt 504  Q
    |||| |||||||||||| ||||||  || ||||||||| |||| |||| ||||||||| ||| || || |||||||  ||| |||||| || |||||||    
T  18639724 tctcttactcacattatatttttatcttatctctattgttttagttttcgtgtcaatacctacttatctttgtaaatattttgttgttccataaattgt 18639626  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #61
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 404 - 463
Target Start/End: Complemental strand, 26208254 - 26208193
Alignment:
Q  404 tttctcatactcacattatgtttttaatttc--tctctattgctttaatttttgtgtcaata 463  Q
    ||||||||||| | |||||||||||| ||||  ||||||||| ||| |||||||||||||||    
T  26208254 tttctcatacttatattatgtttttattttccttctctattgttttgatttttgtgtcaata 26208193  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #62
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 416 - 466
Target Start/End: Complemental strand, 29246488 - 29246438
Alignment:
Q  416 acattatgtttttaatttctctctattgctttaatttttgtgtcaatatct 466  Q
    ||||||| |||||| |||||||||||| |||| ||||||||||| ||||||    
T  29246488 acattatatttttattttctctctattacttttatttttgtgtccatatct 29246438  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #63
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 406 - 463
Target Start/End: Original strand, 31433543 - 31433601
Alignment:
Q  406 tctcatactcacattatgtttttaatt-tctctctattgctttaatttttgtgtcaata 463  Q
    |||||||||||||||||||||||| || ||||||||||  |||| |||| |||||||||    
T  31433543 tctcatactcacattatgtttttatttatctctctattattttagttttcgtgtcaata 31433601  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #64
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 418 - 504
Target Start/End: Original strand, 32923313 - 32923399
Alignment:
Q  418 attatgtttttaatttctctctattgctttaatttttgtgtcaatatctaattttccttgtaaaattttggttgtttcaaaaattgt 504  Q
    ||||| |||||| ||||||||||||| |||||||| || |||||||| || ||||  ||||||| || || ||||  ||||||||||    
T  32923313 attatatttttactttctctctattgttttaatttctgagtcaatatatatttttatttgtaaatttatgattgtcccaaaaattgt 32923399  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #65
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 395 - 441
Target Start/End: Original strand, 40680827 - 40680873
Alignment:
Q  395 acaactatctttctcatactcacattatgtttttaatttctctctat 441  Q
    |||||| | ||||||||||||||||||||||||||  ||||||||||    
T  40680827 acaactttatttctcatactcacattatgtttttaccttctctctat 40680873  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #66
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 435 - 509
Target Start/End: Original strand, 50149029 - 50149103
Alignment:
Q  435 tctctattgctttaatttttgtgtcaatatctaattttccttgtaaaattttggttgtttcaaaaattgtaatat 509  Q
    |||||||||||||  |||||||||||||   | |||||| ||||||||||||| ||||| ||||| |||| ||||    
T  50149029 tctctattgctttggtttttgtgtcaatcaatcattttctttgtaaaattttgattgttgcaaaagttgtcatat 50149103  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #67
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 395 - 502
Target Start/End: Complemental strand, 50726278 - 50726169
Alignment:
Q  395 acaactatctttctcatactcacattatgtttttaatttctctct--attgctttaatttttgtgtcaatatctaattttccttgtaaaattttggttgt 492  Q
    |||||| ||| ||||| | | ||||||| |||||| |||||||||  |||| ||| ||||||||| || || || |||||| ||| ||||||||||||||    
T  50726278 acaactttctctctcacatttacattatctttttactttctctctctattgttttgatttttgtgccactacctcattttctttgcaaaattttggttgt 50726179  T
Q  493 ttcaaaaatt 502  Q
      ||||||||    
T  50726178 cacaaaaatt 50726169  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #68
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 395 - 482
Target Start/End: Original strand, 52437536 - 52437625
Alignment:
Q  395 acaactatctttctcatactcacattatgtttttaatt--tctctctattgctttaatttttgtgtcaatatctaattttccttgtaaaa 482  Q
    |||||| ||| ||||||||||||||||| |||||| ||  ||| ||||||||||| ||||| || ||||||  |||||||  ||||||||    
T  52437536 acaactttctctctcatactcacattatatttttactttatctttctattgctttgattttcgtatcaatacataattttatttgtaaaa 52437625  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #69
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 411 - 493
Target Start/End: Original strand, 3159433 - 3159517
Alignment:
Q  411 tactcacattatgtttttaatt--tctctctattgctttaatttttgtgtcaatatctaattttccttgtaaaattttggttgtt 493  Q
    |||| ||||||| |||||| ||  |||||||||||||||  |||||||| || || || |||| | |||||||||||||||||||    
T  3159433 tacttacattatctttttacttcctctctctattgcttttgtttttgtgccactacctcatttcctttgtaaaattttggttgtt 3159517  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #70
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 408 - 509
Target Start/End: Original strand, 6809636 - 6809737
Alignment:
Q  408 tcatactcacattatgtttttaatttctctctattgctttaatttttgtgtcaatatctaattttccttgtaaaattttggttgtttcaaaaattgtaat 507  Q
    |||||||||||||||  ||||| |||||||| |||| ||| |||||||||  ||| | | ||||||  | |||||||||||||||  ||||| |||| ||    
T  6809636 tcatactcacattattcttttactttctctccattgttttgatttttgtgctaatgtatcattttctatataaaattttggttgtcccaaaagttgtcat 6809735  T
Q  508 at 509  Q
    ||    
T  6809736 at 6809737  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #71
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 395 - 457
Target Start/End: Original strand, 18336188 - 18336251
Alignment:
Q  395 acaactatctttctcatactcacattatgtttttaattt--ctctctattgctttaatttttgtg 457  Q
    |||||| ||| |||||||||||||||| ||||||| |||  |||||||||||||| |||||||||    
T  18336188 acaactttctctctcatactcacatta-gtttttactttatctctctattgctttgatttttgtg 18336251  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #72
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 395 - 457
Target Start/End: Original strand, 35136886 - 35136949
Alignment:
Q  395 acaactatctttctcatactcacattatgtttttaatt--tctctctattgctttaatttttgtg 457  Q
    |||||| ||||||||||||||||||||  |||||| ||  ||||||||||||||| |||||||||    
T  35136886 acaactttctttctcatactcacatta-ctttttactttatctctctattgctttgatttttgtg 35136949  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #73
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 406 - 504
Target Start/End: Original strand, 43560257 - 43560357
Alignment:
Q  406 tctcatactcacattatgtttttaatttctctct--attgctttaatttttgtgtcaatatctaattttccttgtaaaattttggttgtttcaaaaattg 503  Q
    ||||||||||||||||  |||||| |||||||||  ||| ||||  |||  |||||| |||||| ||||||||||||| |  |||||||  |||||||||    
T  43560257 tctcatactcacattaattttttactttctctctctattactttgttttccgtgtcactatctacttttccttgtaaattagtggttgtcacaaaaattg 43560356  T
Q  504 t 504  Q
    |    
T  43560357 t 43560357  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #74
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 395 - 440
Target Start/End: Original strand, 46903511 - 46903556
Alignment:
Q  395 acaactatctttctcatactcacattatgtttttaatttctctcta 440  Q
    |||||| ||| |||||||||||||||||||||||| | ||||||||    
T  46903511 acaactttctctctcatactcacattatgtttttattctctctcta 46903556  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #75
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 406 - 492
Target Start/End: Original strand, 48470691 - 48470779
Alignment:
Q  406 tctcatactcacattatgtttttaatttctc--tctattgctttaatttttgtgtcaatatctaattttccttgtaaaattttggttgt 492  Q
    ||||||||||||||||  |||||| ||||||  ||||||| |||  ||| |||| |||||||| |||| | ||||||||||||| ||||    
T  48470691 tctcatactcacattacctttttactttctctctctattgttttggtttctgtgccaatatctcatttcctttgtaaaattttgattgt 48470779  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #76
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 406 - 442
Target Start/End: Original strand, 1690487 - 1690523
Alignment:
Q  406 tctcatactcacattatgtttttaatttctctctatt 442  Q
    ||||||||||| | |||||||||||||||||||||||    
T  1690487 tctcatactcataatatgtttttaatttctctctatt 1690523  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #77
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 395 - 439
Target Start/End: Complemental strand, 2827740 - 2827696
Alignment:
Q  395 acaactatctttctcatactcacattatgtttttaatttctctct 439  Q
    |||||| ||| |||||||||||||||||||||||| | |||||||    
T  2827740 acaactttctctctcatactcacattatgtttttattctctctct 2827696  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #78
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 406 - 463
Target Start/End: Original strand, 8846026 - 8846085
Alignment:
Q  406 tctcatactcacattatgtttttaatttctct--ctattgctttaatttttgtgtcaata 463  Q
    |||||||||||||| ||||||||| ||| |||  ||||||||||  ||||||||||||||    
T  8846026 tctcatactcacatgatgtttttactttttctttctattgctttggtttttgtgtcaata 8846085  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #79
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 395 - 439
Target Start/End: Original strand, 11897215 - 11897259
Alignment:
Q  395 acaactatctttctcatactcacattatgtttttaatttctctct 439  Q
    |||||| ||| |||||||||||||||||||||||| | |||||||    
T  11897215 acaactttctctctcatactcacattatgtttttattctctctct 11897259  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #80
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 395 - 443
Target Start/End: Original strand, 15059681 - 15059729
Alignment:
Q  395 acaactatctttctcatactcacattatgtttttaatttctctctattg 443  Q
    |||||| ||| ||||||||||||||||| |||||| | |||||||||||    
T  15059681 acaactttctctctcatactcacattatatttttattctctctctattg 15059729  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #81
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 395 - 439
Target Start/End: Complemental strand, 15470086 - 15470042
Alignment:
Q  395 acaactatctttctcatactcacattatgtttttaatttctctct 439  Q
    |||||| ||| ||||||||||||||||| |||||| |||||||||    
T  15470086 acaactttctctctcatactcacattatctttttattttctctct 15470042  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #82
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 395 - 439
Target Start/End: Complemental strand, 21433430 - 21433386
Alignment:
Q  395 acaactatctttctcatactcacattatgtttttaatttctctct 439  Q
    |||||| ||| ||| |||||||||||||||||||| |||||||||    
T  21433430 acaactttctctcttatactcacattatgtttttattttctctct 21433386  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #83
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 395 - 492
Target Start/End: Original strand, 26469400 - 26469499
Alignment:
Q  395 acaactatctttctcatactcacattatgtttttaatttctc--tctattgctttaatttttgtgtcaatatctaattttccttgtaaaattttggttgt 492  Q
    |||||| ||| ||| ||| | ||||||| |||||| ||||||  ||||||||||   ||||||||||| || || |||| | ||||||||||||||||||    
T  26469400 acaactttctctcttatatttacattatctttttattttctctctctattgcttcggtttttgtgtcactacctcatttcctttgtaaaattttggttgt 26469499  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #84
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 395 - 439
Target Start/End: Complemental strand, 28457377 - 28457333
Alignment:
Q  395 acaactatctttctcatactcacattatgtttttaatttctctct 439  Q
    |||||| || ||||||||||||||||||||||||| | |||||||    
T  28457377 acaactttcgttctcatactcacattatgtttttattctctctct 28457333  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #85
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 406 - 481
Target Start/End: Original strand, 35026942 - 35027018
Alignment:
Q  406 tctcatactcacattatgtttttaattt-ctctctattgctttaatttttgtgtcaatatctaattttccttgtaaa 481  Q
    ||||||| |||||||||||||||  ||| ||||||||| |||| |||||  | |||||||||| |||||||| ||||    
T  35026942 tctcataatcacattatgttttttttttcctctctatttctttgattttcatatcaatatctacttttccttataaa 35027018  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #86
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 395 - 439
Target Start/End: Original strand, 40612155 - 40612199
Alignment:
Q  395 acaactatctttctcatactcacattatgtttttaatttctctct 439  Q
    |||||| ||| |||||||||||| ||||||||||| |||||||||    
T  40612155 acaactttctctctcatactcactttatgtttttattttctctct 40612199  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2 (Bit Score: 51; Significance: 5e-20; HSPs: 70)
Name: chr2
Description:

Target: chr2; HSP #1
Raw Score: 51; E-Value: 5e-20
Query Start/End: Original strand, 397 - 492
Target Start/End: Original strand, 2076612 - 2076709
Alignment:
Q  397 aactatctttctcatactcacattatgtttttaatttctct--ctattgctttaatttttgtgtcaatatctaattttccttgtaaaattttggttgt 492  Q
    |||| |||||||| |||||||| ||| |||||| |||||||  |||||||||| ||||||||||||||| || |||||| ||||||||||||||||||    
T  2076612 aactttctttctcctactcacactatctttttactttctctttctattgctttgatttttgtgtcaatacctcattttctttgtaaaattttggttgt 2076709  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #2
Raw Score: 49; E-Value: 8e-19
Query Start/End: Original strand, 395 - 504
Target Start/End: Original strand, 43487420 - 43487531
Alignment:
Q  395 acaactatctttctcatactcacattatgtttttaatttct--ctctattgctttaatttttgtgtcaatatctaattttccttgtaaaattttggttgt 492  Q
    |||||| ||| |||||| |||||||||| |||||| |||||  ||||||||||||  ||||||||||| || || |||| | ||||||||||||||||||    
T  43487420 acaactttctctctcatgctcacattatttttttactttctttctctattgctttggtttttgtgtcactacctcatttcctttgtaaaattttggttgt 43487519  T
Q  493 ttcaaaaattgt 504  Q
    | ||||||||||    
T  43487520 tacaaaaattgt 43487531  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #3
Raw Score: 46; E-Value: 5e-17
Query Start/End: Original strand, 406 - 492
Target Start/End: Original strand, 41195636 - 41195724
Alignment:
Q  406 tctcatactcacattatgtttttaatttctc--tctattgctttaatttttgtgtcaatatctaattttccttgtaaaattttggttgt 492  Q
    ||||||||||||||||  |||||| ||||||  |||||||||||  ||||||||||||||||| |||| | ||||||||||||||||||    
T  41195636 tctcatactcacattacctttttactttctctctctattgctttggtttttgtgtcaatatctcatttcctttgtaaaattttggttgt 41195724  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #4
Raw Score: 45; E-Value: 2e-16
Query Start/End: Original strand, 395 - 492
Target Start/End: Complemental strand, 18254239 - 18254140
Alignment:
Q  395 acaactatctttctcatactcacattatgtttttaatttctctct--attgctttaatttttgtgtcaatatctaattttccttgtaaaattttggttgt 492  Q
    |||||| ||| ||||||||||||||||| |||||| |||||||||  ||||||||  |||||||| || ||||| |||| | ||||||||||||||||||    
T  18254239 acaactttctctctcatactcacattatctttttactttctctctctattgctttggtttttgtgccactatctcatttcctttgtaaaattttggttgt 18254140  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #5
Raw Score: 45; E-Value: 2e-16
Query Start/End: Original strand, 395 - 492
Target Start/End: Complemental strand, 27490760 - 27490661
Alignment:
Q  395 acaactatctttctcatactcacattatgtttttaatttctctct--attgctttaatttttgtgtcaatatctaattttccttgtaaaattttggttgt 492  Q
    |||||| ||| ||||| ||||| ||||||||||||||||||||||  |||||||| |||||||||| ||||  | |||||| ||||||||||||| ||||    
T  27490760 acaactttctctctcacactcatattatgtttttaatttctctctctattgctttgatttttgtgttaatacatcattttctttgtaaaattttgattgt 27490661  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #6
Raw Score: 44; E-Value: 8e-16
Query Start/End: Original strand, 395 - 502
Target Start/End: Complemental strand, 8848725 - 8848618
Alignment:
Q  395 acaactatctttctcatactcacattatgtttttaatttctctctattgctttaatttttgtgtcaatatctaattttccttgtaaaattttggttgttt 494  Q
    |||||| ||| ||||| |||||||| ||||||||| ||||||||||||||||| ||||||||  |||||  | |||||| ||| ||||||||| ||||      
T  8848725 acaactttctctctcacactcacatcatgtttttactttctctctattgctttgatttttgtaccaatacatcattttctttgcaaaattttgattgtca 8848626  T
Q  495 caaaaatt 502  Q
    ||||||||    
T  8848625 caaaaatt 8848618  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #7
Raw Score: 43; E-Value: 0.000000000000003
Query Start/End: Original strand, 395 - 502
Target Start/End: Original strand, 9207631 - 9207740
Alignment:
Q  395 acaactatctttctcatactcacattatgtttttaatttctc--tctattgctttaatttttgtgtcaatatctaattttccttgtaaaattttggttgt 492  Q
    |||||| ||| ||||||||||||||||| |||||| ||||||  |||||||||||  |||||||| || || || |||| | ||||||||||||||||||    
T  9207631 acaactttctctctcatactcacattatttttttactttctctctctattgctttggtttttgtgccactacctcatttcctttgtaaaattttggttgt 9207730  T
Q  493 ttcaaaaatt 502  Q
      ||||||||    
T  9207731 cacaaaaatt 9207740  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #8
Raw Score: 43; E-Value: 0.000000000000003
Query Start/End: Original strand, 416 - 502
Target Start/End: Complemental strand, 33273594 - 33273508
Alignment:
Q  416 acattatgtttttaatttctctctattgctttaatttttgtgtcaatatctaattttccttgtaaaattttggttgtttcaaaaatt 502  Q
    |||||||||||| | | ||||| ||||  |||| ||||||||||||||||| |||||| || ||||||||||||||||| |||||||    
T  33273594 acattatgttttcattatctctttattattttagtttttgtgtcaatatctcattttctttataaaattttggttgtttaaaaaatt 33273508  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #9
Raw Score: 43; E-Value: 0.000000000000003
Query Start/End: Original strand, 395 - 485
Target Start/End: Complemental strand, 36587498 - 36587408
Alignment:
Q  395 acaactatctttctcatactcacattatgtttttaatttctctctattgctttaatttttgtgtcaatatctaattttccttgtaaaattt 485  Q
    |||||| ||| |||||||||||||||||  ||||| | ||||||||||||||| ||||||||| || ||||||| |||| ||||| |||||    
T  36587498 acaactttctctctcatactcacattatcattttactctctctctattgctttgatttttgtgccactatctaaatttctttgtataattt 36587408  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #10
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 406 - 492
Target Start/End: Original strand, 41042306 - 41042394
Alignment:
Q  406 tctcatactcacattatgtttttaatttctc--tctattgctttaatttttgtgtcaatatctaattttccttgtaaaattttggttgt 492  Q
    ||||||||||||||||| |||||| ||||||  |||||||||||  ||||| ||||||||||| |||| | || |||||||||||||||    
T  41042306 tctcatactcacattatctttttactttctctctctattgctttggtttttatgtcaatatctcatttcctttataaaattttggttgt 41042394  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #11
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 433 - 492
Target Start/End: Complemental strand, 37737961 - 37737902
Alignment:
Q  433 tctctctattgctttaatttttgtgtcaatatctaattttccttgtaaaattttggttgt 492  Q
    ||||||||||||||| |||||||||||||||||| |||| | ||||||| ||||||||||    
T  37737961 tctctctattgctttgatttttgtgtcaatatctcatttcctttgtaaagttttggttgt 37737902  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #12
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 406 - 504
Target Start/End: Original strand, 42430702 - 42430802
Alignment:
Q  406 tctcatactcacattatgtttttaatt--tctctctattgctttaatttttgtgtcaatatctaattttccttgtaaaattttggttgtttcaaaaattg 503  Q
    |||||||||||||||||||||||| ||  ||||||||||| |||  |||  ||||||||| ||| ||||| ||||||| || |||||||| ||||| |||    
T  42430702 tctcatactcacattatgtttttacttcctctctctattgttttggtttccgtgtcaatacctacttttctttgtaaacttatggttgttccaaaagttg 42430801  T
Q  504 t 504  Q
    |    
T  42430802 t 42430802  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #13
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 397 - 492
Target Start/End: Complemental strand, 6049372 - 6049276
Alignment:
Q  397 aactatctttctcatactcacattatgt-ttttaatttctctctattgctttaatttttgtgtcaatatctaattttccttgtaaaattttggttgt 492  Q
    |||| ||| ||||||||||||||||| | ||||| ||||||||| |||||||  |||||||| ||||| || |||| | ||||||||||||| ||||    
T  6049372 aactttctctctcatactcacattatttattttactttctctctcttgctttggtttttgtgccaatacctcatttcctttgtaaaattttgattgt 6049276  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #14
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 395 - 492
Target Start/End: Original strand, 6511292 - 6511391
Alignment:
Q  395 acaactatctttctcatactcacattatgtttttaatttctc--tctattgctttaatttttgtgtcaatatctaattttccttgtaaaattttggttgt 492  Q
    |||||| ||| ||||||||||||||||| |||||| ||||||  |||||||||||  ||||||||||| || || |||| | || |||||||||| ||||    
T  6511292 acaactttctctctcatactcacattatctttttattttctctttctattgctttggtttttgtgtcactacctcatttcctttataaaattttgattgt 6511391  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #15
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 395 - 492
Target Start/End: Original strand, 9647173 - 9647272
Alignment:
Q  395 acaactatctttctcatactcacattatgtttttaatttctc--tctattgctttaatttttgtgtcaatatctaattttccttgtaaaattttggttgt 492  Q
    |||||| ||| ||||||||||| ||||| |||||| ||||||  |||||||||||  ||||||||||| ||  | |||| | ||||||||||||||||||    
T  9647173 acaactttctctctcatactcatattatctttttactttctctctctattgctttggtttttgtgtcactacttcatttcctttgtaaaattttggttgt 9647272  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #16
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 410 - 499
Target Start/End: Original strand, 19642654 - 19642745
Alignment:
Q  410 atactcacattatgtttttaatttctc--tctattgctttaatttttgtgtcaatatctaattttccttgtaaaattttggttgtttcaaaa 499  Q
    |||||||||||||||||| | ||||||  ||||||||||| ||||||||||||||   | |||||| ||| |||||| ||||||| ||||||    
T  19642654 atactcacattatgttttcactttctctctctattgctttgatttttgtgtcaatgcttcattttctttgcaaaattgtggttgtctcaaaa 19642745  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #17
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 397 - 457
Target Start/End: Complemental strand, 21611686 - 21611626
Alignment:
Q  397 aactatctttctcatactcacattatgtttttaatttctctctattgctttaatttttgtg 457  Q
    |||| ||||||||||| ||| ||||| |||||| ||||||||||||||||| |||||||||    
T  21611686 aactttctttctcatattcatattatctttttactttctctctattgctttgatttttgtg 21611626  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #18
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 395 - 492
Target Start/End: Complemental strand, 34945120 - 34945021
Alignment:
Q  395 acaactatctttctcatactcacattatgtttttaatttctctct--attgctttaatttttgtgtcaatatctaattttccttgtaaaattttggttgt 492  Q
    |||||| ||| |||||||||||||| || |||||| |||||||||  |||||||| ||||||||| || || || ||||   ||||||||||||||||||    
T  34945120 acaactttctctctcatactcacatgatctttttactttctctctctattgctttgatttttgtgccactacctcatttcttttgtaaaattttggttgt 34945021  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #19
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 395 - 504
Target Start/End: Complemental strand, 42091534 - 42091423
Alignment:
Q  395 acaactatctttctcatactcacattatgtttttaattt--ctctctattgctttaatttttgtgtcaatatctaattttccttgtaaaattttggttgt 492  Q
    |||||| ||| ||| ||||||||||||| | |||| |||  ||||||||||||||  ||||||||||| || ||  ||| | ||||||||||||||||||    
T  42091534 acaactttctctcttatactcacattatctctttacttttcctctctattgctttggtttttgtgtcactacctcgtttcctttgtaaaattttggttgt 42091435  T
Q  493 ttcaaaaattgt 504  Q
      ||||||||||    
T  42091434 cacaaaaattgt 42091423  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #20
Raw Score: 36; E-Value: 0.00000000005
Query Start/End: Original strand, 395 - 467
Target Start/End: Complemental strand, 12889861 - 12889788
Alignment:
Q  395 acaactatctttctcatactcacattatgtttttaattt--ctctctattgctttaatttttgtgtcaatatcta 467  Q
    |||||| ||| ||||||||||||||||| ||||||||||  |||||||||||||| |||||||||  ||||||||    
T  12889861 acaactttctctctcatactcacattat-tttttaatttatctctctattgctttgatttttgtgcaaatatcta 12889788  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #21
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 427 - 504
Target Start/End: Complemental strand, 3412551 - 3412473
Alignment:
Q  427 ttaatttctctctattgctttaattttt-gtgtcaatatctaattttccttgtaaaattttggttgtttcaaaaattgt 504  Q
    ||||| ||| ||||||||||| |||||| ||| ||||||||| ||||| ||||||| || |||||||||||||| ||||    
T  3412551 ttaatctctttctattgctttgattttttgtggcaatatctacttttctttgtaaatttatggttgtttcaaaagttgt 3412473  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #22
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 406 - 456
Target Start/End: Complemental strand, 6842576 - 6842526
Alignment:
Q  406 tctcatactcacattatgtttttaatttctctctattgctttaatttttgt 456  Q
    ||||||||||||||||| |||||| || ||||||||| |||||||||||||    
T  6842576 tctcatactcacattatatttttatttcctctctattactttaatttttgt 6842526  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #23
Raw Score: 34; E-Value: 0.0000000007
Query Start/End: Original strand, 408 - 498
Target Start/End: Original strand, 1352443 - 1352535
Alignment:
Q  408 tcatactcacattatgtttttaatttct--ctctattgctttaatttttgtgtcaatatctaattttccttgtaaaattttggttgtttcaaa 498  Q
    ||||||||||||||| |||||| ||| |  ||||||||||||  |||||||| ||||  || |||||| |||||||||||| |||||| ||||    
T  1352443 tcatactcacattatatttttactttatttctctattgctttggtttttgtgccaatcactcattttctttgtaaaattttagttgttgcaaa 1352535  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #24
Raw Score: 34; E-Value: 0.0000000007
Query Start/End: Original strand, 395 - 492
Target Start/End: Original strand, 6336294 - 6336391
Alignment:
Q  395 acaactatctttctcatactcacattatgtttttaatttctctctattgctttaatttttgtgtcaatatctaattttccttgtaaaattttggttgt 492  Q
    |||||| ||| ||||||||||| ||||| |||||| ||||||||||| |||||  |||||||| ||| |  || ||||| |||||||| | |||||||    
T  6336294 acaactttctctctcatactcatattatatttttattttctctctatcgctttggtttttgtgccaacacatacttttctttgtaaaaatatggttgt 6336391  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #25
Raw Score: 34; E-Value: 0.0000000007
Query Start/End: Original strand, 406 - 504
Target Start/End: Original strand, 9194293 - 9194393
Alignment:
Q  406 tctcatactcacattatgtttttaatt--tctctctattgctttaatttttgtgtcaatatctaattttccttgtaaaattttggttgtttcaaaaattg 503  Q
    ||||||||||||||||| |||||| ||  ||||||||||| |||  |||||||| || || || ||||   ||||||||||||||||||  |||||||||    
T  9194293 tctcatactcacattatctttttactttctctctctattgttttggtttttgtgccattacctcatttcttttgtaaaattttggttgtcacaaaaattg 9194392  T
Q  504 t 504  Q
    |    
T  9194393 t 9194393  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #26
Raw Score: 34; E-Value: 0.0000000007
Query Start/End: Original strand, 406 - 447
Target Start/End: Complemental strand, 10833664 - 10833623
Alignment:
Q  406 tctcatactcacattatgtttttaatttctctctattgcttt 447  Q
    ||||||||||||||||| |||||| |||||||||||||||||    
T  10833664 tctcatactcacattatttttttactttctctctattgcttt 10833623  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #27
Raw Score: 34; E-Value: 0.0000000007
Query Start/End: Original strand, 410 - 492
Target Start/End: Original strand, 32477388 - 32477472
Alignment:
Q  410 atactcacattatgtttttaatttctctc--tattgctttaatttttgtgtcaatatctaattttccttgtaaaattttggttgt 492  Q
    ||||||||||||| |||||| ||||||||  ||||||||| |||||||| | |||| || |||| | |||| |||||||||||||    
T  32477388 atactcacattatctttttactttctctctatattgctttgatttttgtatgaatacctcatttcctttgtcaaattttggttgt 32477472  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #28
Raw Score: 34; E-Value: 0.0000000007
Query Start/End: Original strand, 402 - 447
Target Start/End: Original strand, 38821415 - 38821460
Alignment:
Q  402 tctttctcatactcacattatgtttttaatttctctctattgcttt 447  Q
    ||||||||||||||||||| ||||||||  ||||||||||||||||    
T  38821415 tctttctcatactcacattgtgtttttaccttctctctattgcttt 38821460  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #29
Raw Score: 34; E-Value: 0.0000000007
Query Start/End: Original strand, 406 - 492
Target Start/End: Complemental strand, 44977518 - 44977430
Alignment:
Q  406 tctcatactcacattatgtttttaatttctctct--attgctttaatttttgtgtcaatatctaattttccttgtaaaattttggttgt 492  Q
    ||||||| | |||||||||||||| |||||||||  ||||||||  |||||||||||||| |  |||||| ||||||| || |||||||    
T  44977518 tctcatatttacattatgtttttactttctctctctattgctttggtttttgtgtcaataccccattttctttgtaaatttatggttgt 44977430  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #30
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 397 - 486
Target Start/End: Original strand, 7698214 - 7698305
Alignment:
Q  397 aactatctttctcatactcacattatgtttttaatttctct--ctattgctttaatttttgtgtcaatatctaattttccttgtaaaatttt 486  Q
    |||| ||||| | ||| ||||||||| |||||| |||||||  |||||||||| ||||||||| || || ||||||| | ||||||||||||    
T  7698214 aactttcttttttatattcacattatttttttactttctctttctattgctttgatttttgtgccactacctaatttcctttgtaaaatttt 7698305  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #31
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 395 - 492
Target Start/End: Original strand, 9760059 - 9760158
Alignment:
Q  395 acaactatctttctcatactcacattatgtttttaatt--tctctctattgctttaatttttgtgtcaatatctaattttccttgtaaaattttggttgt 492  Q
    |||||| ||| ||||||||||||||||| |||||| ||  ||||||||||||||||  ||||||| || || || |||| | | | ||||||||||||||    
T  9760059 acaactttctctctcatactcacattatctttttactttctctctctattgctttagattttgtgccactacctcatttccttggaaaaattttggttgt 9760158  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #32
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 404 - 497
Target Start/End: Complemental strand, 16973782 - 16973687
Alignment:
Q  404 tttctcatactcacattatgtttttaatttctct--ctattgctttaatttttgtgtcaatatctaattttccttgtaaaattttggttgtttcaa 497  Q
    ||||| ||||| | ||||| |||||| |||||||  ||||| |||| ||||||| |||||| ||| |||||  |||||||||||||||||| ||||    
T  16973782 tttcttatacttagattatatttttattttctcttactattactttgatttttgggtcaatttctcattttatttgtaaaattttggttgtatcaa 16973687  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #33
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 402 - 499
Target Start/End: Original strand, 31414958 - 31415057
Alignment:
Q  402 tctttctcatactcacattatgtttttaatt--tctctctattgctttaatttttgtgtcaatatctaattttccttgtaaaattttggttgtttcaaaa 499  Q
    |||||||||||||  ||||||||||||| ||  ||||||| |||| ||  |||||||||||||||||   |||| || ||||||| ||||||| ||||||    
T  31414958 tctttctcatactatcattatgtttttacttactctctctgttgcattggtttttgtgtcaatatctctctttctttttaaaattatggttgtctcaaaa 31415057  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #34
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 406 - 479
Target Start/End: Original strand, 31578487 - 31578562
Alignment:
Q  406 tctcatactcacattatgtttttaattt--ctctctattgctttaatttttgtgtcaatatctaattttccttgta 479  Q
    |||||||||||||||||  ||||| |||  |||||||||||||| |||||||||||| || |||| |||| |||||    
T  31578487 tctcatactcacattattcttttactttatctctctattgctttgatttttgtgtcactacctaaatttctttgta 31578562  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #35
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 408 - 481
Target Start/End: Complemental strand, 33583239 - 33583164
Alignment:
Q  408 tcatactcacat--tatgtttttaatttctctctattgctttaatttttgtgtcaatatctaattttccttgtaaa 481  Q
    ||||||||||||  |||||||||| ||||||||||||| |||  ||||| |||||||| || |||||| |||||||    
T  33583239 tcatactcacatattatgtttttactttctctctattgttttgttttttttgtcaatacctcattttctttgtaaa 33583164  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #36
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 395 - 464
Target Start/End: Original strand, 40700237 - 40700308
Alignment:
Q  395 acaactatctttctcatactcacattatgtttttaatt--tctctctattgctttaatttttgtgtcaatat 464  Q
    |||||| ||| ||||||||||||||||| |||||| ||  |||||||||| |||| ||||| ||||||||||    
T  40700237 acaactttctctctcatactcacattatatttttactttatctctctattactttgattttcgtgtcaatat 40700308  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #37
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 395 - 507
Target Start/End: Original strand, 28494901 - 28495015
Alignment:
Q  395 acaactatctttctcatactcacattatgtttttaatttctctcta--ttgctttaatttttgtgtcaatatctaattttccttgtaaaattttggttgt 492  Q
    |||||| ||| | ||| ||||| |||||||||||| ||||||||||  ||  |||  |||||||||||||| |||||||||  |||||| || |||||||    
T  28494901 acaactttctctttcacactcatattatgtttttattttctctctaaattattttggtttttgtgtcaatacctaattttctgtgtaaatttatggttgt 28495000  T
Q  493 ttcaaaaattgtaat 507  Q
      ||||| |||||||    
T  28495001 cacaaaagttgtaat 28495015  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #38
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 410 - 504
Target Start/End: Original strand, 39430710 - 39430805
Alignment:
Q  410 atactcacattatgtttttaatt-tctctctattgctttaatttttgtgtcaatatctaattttccttgtaaaattttggttgtttcaaaaattgt 504  Q
    ||||||||||||  |||||| || ||||| |||| ||||| |||||||||||||   | |||||| ||||||||||||| ||||| |||| |||||    
T  39430710 atactcacattacatttttacttctctctttattactttagtttttgtgtcaatcatttattttctttgtaaaattttgattgttgcaaagattgt 39430805  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #39
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 450 - 509
Target Start/End: Complemental strand, 41056720 - 41056661
Alignment:
Q  450 tttttgtgtcaatatctaattttccttgtaaaattttggttgtttcaaaaattgtaatat 509  Q
    |||||||||||||| || |||||| || ||||||||||||||| |||||| |||| ||||    
T  41056720 tttttgtgtcaatacctcattttctttataaaattttggttgtctcaaaagttgtcatat 41056661  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #40
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 402 - 457
Target Start/End: Complemental strand, 42530256 - 42530201
Alignment:
Q  402 tctttctcatactcacattatgtttttaatttctctctattgctttaatttttgtg 457  Q
    ||||| ||||| |||||||||||||||| | | ||||||||||||| |||||||||    
T  42530256 tctttttcatattcacattatgtttttactctatctctattgctttgatttttgtg 42530201  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #41
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 395 - 463
Target Start/End: Complemental strand, 42532768 - 42532698
Alignment:
Q  395 acaactatctttctcatactcacattatgtttttaatt--tctctctattgctttaatttttgtgtcaata 463  Q
    |||||| ||||||||||||||||||||| |||||| ||  |||||||||| |||| ||||| ||| |||||    
T  42532768 acaactttctttctcatactcacattatatttttactttatctctctattactttgattttcgtgccaata 42532698  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #42
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 407 - 482
Target Start/End: Original strand, 1040567 - 1040644
Alignment:
Q  407 ctcatactcacattatgtttttaatttctc--tctattgctttaatttttgtgtcaatatctaattttccttgtaaaa 482  Q
    |||||||||||||||| |||||| ||||||  |||||| |||| ||||||||| |||||  || ||||| ||||||||    
T  1040567 ctcatactcacattatatttttattttctctttctattactttgatttttgtgccaatacatacttttctttgtaaaa 1040644  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #43
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 395 - 486
Target Start/End: Original strand, 1248727 - 1248820
Alignment:
Q  395 acaactatctttctcatactcacattatgtttttaattt--ctctctattgctttaatttttgtgtcaatatctaattttccttgtaaaatttt 486  Q
    |||||| ||||||||||||| | ||||| |||||| |||  ||||||||||||||  |||||||| || || || |||| | ||||||||||||    
T  1248727 acaactttctttctcatacttaaattatctttttactttatctctctattgctttggtttttgtgccactacctcatttcctttgtaaaatttt 1248820  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #44
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 406 - 492
Target Start/End: Complemental strand, 10060453 - 10060367
Alignment:
Q  406 tctcatactcacattatgtttttaatttctctctattgctttaatttttgtgtcaatatctaattttccttgtaaaattttggttgt 492  Q
    ||||||||||| ||||| |||||| | ||||||| |||||||| ||||| |  |||||||| |||| | || ||||||||| |||||    
T  10060453 tctcatactcatattatctttttactctctctctgttgctttagtttttatagcaatatctcatttcctttataaaattttagttgt 10060367  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #45
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 409 - 492
Target Start/End: Original strand, 22416268 - 22416353
Alignment:
Q  409 catactcacattatgtttttaatttctc--tctattgctttaatttttgtgtcaatatctaattttccttgtaaaattttggttgt 492  Q
    |||||| ||||||| |||||| ||||||  |||||||||||  |||||||| || |  || |||||| ||||||||||||||||||    
T  22416268 catacttacattatctttttactttctctctctattgctttggtttttgtgccactgcctcattttctttgtaaaattttggttgt 22416353  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #46
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 406 - 457
Target Start/End: Original strand, 30784000 - 30784053
Alignment:
Q  406 tctcatactcacattatgtttttaatttc--tctctattgctttaatttttgtg 457  Q
    |||| ||||||||||||||||||| ||||  ||||| |||||||||||||||||    
T  30784000 tctcgtactcacattatgtttttactttctatctctgttgctttaatttttgtg 30784053  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #47
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 409 - 463
Target Start/End: Original strand, 2144775 - 2144831
Alignment:
Q  409 catactcacattatgtttttaatt--tctctctattgctttaatttttgtgtcaata 463  Q
    |||||||||||| |||||||||||  |||||||||||||||  |||||||| |||||    
T  2144775 catactcacattttgtttttaatttatctctctattgctttggtttttgtgccaata 2144831  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #48
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 406 - 479
Target Start/End: Complemental strand, 16049302 - 16049229
Alignment:
Q  406 tctcatactcacattatgtttttaatttctctctattgctttaatttttgtgtcaatatctaattttccttgta 479  Q
    ||||||| ||||||| |||||| | ||||||||||||  |||| |||| || |||||||||| ||||| |||||    
T  16049302 tctcatattcacattgtgttttcattttctctctattattttagttttcgtatcaatatctacttttctttgta 16049229  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #49
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 435 - 480
Target Start/End: Complemental strand, 22446012 - 22445967
Alignment:
Q  435 tctctattgctttaatttttgtgtcaatatctaattttccttgtaa 480  Q
    ||||||||||||||||||||||||||||| || |||| | ||||||    
T  22446012 tctctattgctttaatttttgtgtcaatacctcatttcctttgtaa 22445967  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #50
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 395 - 492
Target Start/End: Complemental strand, 23690539 - 23690439
Alignment:
Q  395 acaactatctttctcatactcacattatgt-ttttaatttct--ctctattgctttaatttttgtgtcaatatctaattttccttgtaaaattttggttg 491  Q
    |||||| ||| ||||||||||||||||||| ||||| |||||  |||||||| |||  |||||||||||||| ||  ||| | |||||||| | ||||||    
T  23690539 acaactttctctctcatactcacattatgttttttactttctcactctattgttttggtttttgtgtcaatacctcttttcctttgtaaaaatatggttg 23690440  T
Q  492 t 492  Q
    |    
T  23690439 t 23690439  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #51
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 410 - 443
Target Start/End: Complemental strand, 28277781 - 28277748
Alignment:
Q  410 atactcacattatgtttttaatttctctctattg 443  Q
    |||||||||||||||||||| |||||||||||||    
T  28277781 atactcacattatgtttttactttctctctattg 28277748  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #52
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 395 - 457
Target Start/End: Original strand, 29449253 - 29449317
Alignment:
Q  395 acaactatctttctcatactcacattatgtttttaatt--tctctctattgctttaatttttgtg 457  Q
    |||||| ||| ||||||||||||||||| |||||| ||  |||||||||| |||| |||||||||    
T  29449253 acaactttctctctcatactcacattatatttttactttctctctctattactttgatttttgtg 29449317  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #53
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 395 - 504
Target Start/End: Original strand, 32344540 - 32344649
Alignment:
Q  395 acaactatctttctcatactcacattatgtttttaatttctctctattgctttaatttttgtgtcaatatctaattttccttgtaaaattttggttgttt 494  Q
    |||||| | ||||||||||| |  |||| ||||||  || ||| ||||| ||| |||||||||||||||| || ||||| ||||||| || ||||| ||     
T  32344540 acaactttatttctcatacttatgttatatttttatcttatctttattgatttgatttttgtgtcaatatttatttttctttgtaaatttatggttattc 32344639  T
Q  495 caaaaattgt 504  Q
     |||||||||    
T  32344640 taaaaattgt 32344649  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #54
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 395 - 440
Target Start/End: Original strand, 34373046 - 34373091
Alignment:
Q  395 acaactatctttctcatactcacattatgtttttaatttctctcta 440  Q
    |||||| ||| |||||||||||||||||||||||| | ||||||||    
T  34373046 acaactttctctctcatactcacattatgtttttattctctctcta 34373091  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #55
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 395 - 481
Target Start/End: Original strand, 39147807 - 39147895
Alignment:
Q  395 acaactatctttctcatactcacattatgtttttaatttctc--tctattgctttaatttttgtgtcaatatctaattttccttgtaaa 481  Q
    |||||| ||| | ||||| |||||||||||||||| ||||||  | ||||| ||| ||||||||||||||| || |||||  |||||||    
T  39147807 acaactttctctttcatattcacattatgtttttactttctctttgtattgttttgatttttgtgtcaatacctcattttttttgtaaa 39147895  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #56
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 406 - 504
Target Start/End: Original strand, 44050068 - 44050167
Alignment:
Q  406 tctcatactcacattatgtttttaatttc--tctctattgctttaatttttgtgtcaatatctaattttccttgtaaaattttggttgtttcaaaaattg 503  Q
    |||||||||||||||||||||||| ||||  ||| |||||||||  |||  ||||||||| |  |||||| ||||||| || ||||||| |||||| |||    
T  44050068 tctcatactcacattatgtttttactttctttctttattgctttggtttccgtgtcaata-catattttctttgtaaatttatggttgtctcaaaagttg 44050166  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #57
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 408 - 440
Target Start/End: Original strand, 4858167 - 4858199
Alignment:
Q  408 tcatactcacattatgtttttaatttctctcta 440  Q
    |||||||||||||||||||||| ||||||||||    
T  4858167 tcatactcacattatgtttttattttctctcta 4858199  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #58
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 395 - 456
Target Start/End: Complemental strand, 7084744 - 7084681
Alignment:
Q  395 acaactatctttctcatactcacattatgtttttaatttctc--tctattgctttaatttttgt 456  Q
    |||||| ||| ||||||||||| ||||| |||||| ||||||  ||||||||||| ||||||||    
T  7084744 acaactttctctctcatactcatattatatttttactttctctttctattgctttgatttttgt 7084681  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #59
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 395 - 439
Target Start/End: Complemental strand, 10472177 - 10472133
Alignment:
Q  395 acaactatctttctcatactcacattatgtttttaatttctctct 439  Q
    |||||| ||| ||||||||||||||||| |||||| |||||||||    
T  10472177 acaactttctctctcatactcacattatatttttactttctctct 10472133  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #60
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 406 - 463
Target Start/End: Original strand, 14328434 - 14328493
Alignment:
Q  406 tctcatactcacattatgtttttaatt--tctctctattgctttaatttttgtgtcaata 463  Q
    ||||||||||||||||| |||||| ||  ||||||| ||||||| ||||| |||||||||    
T  14328434 tctcatactcacattatatttttactttctctctctgttgctttgattttcgtgtcaata 14328493  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #61
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 395 - 439
Target Start/End: Complemental strand, 20247897 - 20247853
Alignment:
Q  395 acaactatctttctcatactcacattatgtttttaatttctctct 439  Q
    |||||| ||| |||||||||||||||||||||||| | |||||||    
T  20247897 acaactttctctctcatactcacattatgtttttattctctctct 20247853  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #62
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 406 - 482
Target Start/End: Complemental strand, 21738634 - 21738558
Alignment:
Q  406 tctcatactcacattatgtttttaatttctctctattgctttaatttttgtgtcaatatctaattttccttgtaaaa 482  Q
    ||||||||||||||||| |||||| ||||| || ||||||||  |||||||| ||| |  || ||||| ||||||||    
T  21738634 tctcatactcacattatatttttactttctttcaattgctttggtttttgtgccaacacatatttttctttgtaaaa 21738558  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #63
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 395 - 447
Target Start/End: Complemental strand, 23352934 - 23352883
Alignment:
Q  395 acaactatctttctcatactcacattatgtttttaatttctctctattgcttt 447  Q
    |||||| ||| ||||||||||||||||| |||||| ||| |||||||||||||    
T  23352934 acaactttctctctcatactcacattat-tttttactttatctctattgcttt 23352883  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #64
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 395 - 504
Target Start/End: Original strand, 28245770 - 28245879
Alignment:
Q  395 acaactatctttctcatactcacattatgtttttaatt--tctctctattgctttaatttttgtgtcaatatctaattttccttgtaaaattttggttgt 492  Q
    |||||| ||| ||||||||||||||||| |||||| ||  |||||||||||||||  |||| |||  |||| ||| ||||| |||| |||||  ||||||    
T  28245770 acaactttctctctcatactcacattat-tttttactttatctctctattgctttggttttcgtgcaaatacctatttttctttgt-aaattaaggttgt 28245867  T
Q  493 ttcaaaaattgt 504  Q
    ||||||| ||||    
T  28245868 ttcaaaagttgt 28245879  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #65
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 395 - 492
Target Start/End: Original strand, 29349547 - 29349646
Alignment:
Q  395 acaactatctttctcatactcacattatgtttttaa--tttctctctattgctttaatttttgtgtcaatatctaattttccttgtaaaattttggttgt 492  Q
    |||||| ||| ||||| | ||||||||||||||||   ||||||||| || |||| ||||||||| | |||  | |||||| ||||||||||||| ||||    
T  29349547 acaactttctctctcacattcacattatgtttttaccttttctctctgttactttgatttttgtgccgatacattattttctttgtaaaattttgattgt 29349646  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #66
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 406 - 463
Target Start/End: Complemental strand, 33737352 - 33737293
Alignment:
Q  406 tctcatactcacattatgtttttaatttctctct--attgctttaatttttgtgtcaata 463  Q
    |||||||||||| ||||||||||| |||||||||  ||||||||  ||||||||| ||||    
T  33737352 tctcatactcacgttatgtttttactttctctctgaattgctttggtttttgtgttaata 33737293  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #67
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 406 - 463
Target Start/End: Original strand, 34215317 - 34215376
Alignment:
Q  406 tctcatactcacattatgtttttaatttctct--ctattgctttaatttttgtgtcaata 463  Q
    ||||||| |||||||||||||||| ||| |||  |||||||| || ||||||||||||||    
T  34215317 tctcatattcacattatgtttttactttttctttctattgctatagtttttgtgtcaata 34215376  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #68
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 395 - 456
Target Start/End: Complemental strand, 36644109 - 36644046
Alignment:
Q  395 acaactatctttctcatactcacattatgtttttaatt--tctctctattgctttaatttttgt 456  Q
    |||||| ||| | ||||||||||||||| |||||||||  ||||||| ||||||| ||||||||    
T  36644109 acaactttctctttcatactcacattatttttttaatttatctctctgttgctttgatttttgt 36644046  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #69
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 395 - 439
Target Start/End: Original strand, 40721812 - 40721856
Alignment:
Q  395 acaactatctttctcatactcacattatgtttttaatttctctct 439  Q
    |||||| ||| |||||||||||||||||||||||| | |||||||    
T  40721812 acaactttctctctcatactcacattatgtttttattctctctct 40721856  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #70
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 395 - 439
Target Start/End: Original strand, 43725246 - 43725290
Alignment:
Q  395 acaactatctttctcatactcacattatgtttttaatttctctct 439  Q
    |||||| ||| |||||||||||||||||||||||| | |||||||    
T  43725246 acaactttctctctcatactcacattatgtttttattctctctct 43725290  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5 (Bit Score: 50; Significance: 2e-19; HSPs: 63)
Name: chr5
Description:

Target: chr5; HSP #1
Raw Score: 50; E-Value: 2e-19
Query Start/End: Original strand, 395 - 492
Target Start/End: Complemental strand, 7552995 - 7552898
Alignment:
Q  395 acaactatctttctcatactcacattatgtttttaatttctctctattgctttaatttttgtgtcaatatctaattttccttgtaaaattttggttgt 492  Q
    |||||| ||| ||||| |||||||||||||||||| |||||||||| ||| || |||||||||||||||  | |||||| ||| ||||||||||||||    
T  7552995 acaactttctctctcacactcacattatgtttttactttctctctactgcattgatttttgtgtcaatacatcattttctttgcaaaattttggttgt 7552898  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #2
Raw Score: 49; E-Value: 8e-19
Query Start/End: Original strand, 395 - 492
Target Start/End: Original strand, 33037561 - 33037660
Alignment:
Q  395 acaactatctttctcatactcacattatgtttttaattt--ctctctattgctttaatttttgtgtcaatatctaattttccttgtaaaattttggttgt 492  Q
    |||||| ||| ||||||||||||||||| |||||| |||  |||||||||||||| |||||||||||| || || |||| | ||||||||||||||||||    
T  33037561 acaactttctctctcatactcacattatctttttactttttctctctattgctttgatttttgtgtcactacctcatttcctttgtaaaattttggttgt 33037660  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #3
Raw Score: 49; E-Value: 8e-19
Query Start/End: Original strand, 395 - 504
Target Start/End: Original strand, 41321296 - 41321407
Alignment:
Q  395 acaactatctttctcatactcacattatgtttttaatttctctct--attgctttaatttttgtgtcaatatctaattttccttgtaaaattttggttgt 492  Q
    |||||| ||||||||||||||||||||| ||| || |||||||||  ||| ||||  |||||||||||||| || |||| | ||||||||||||||||||    
T  41321296 acaactttctttctcatactcacattatctttgtactttctctctctattactttggtttttgtgtcaatacctcatttcctttgtaaaattttggttgt 41321395  T
Q  493 ttcaaaaattgt 504  Q
      ||||||||||    
T  41321396 cacaaaaattgt 41321407  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #4
Raw Score: 48; E-Value: 3e-18
Query Start/End: Original strand, 406 - 481
Target Start/End: Original strand, 20270623 - 20270698
Alignment:
Q  406 tctcatactcacattatgtttttaatttctctctattgctttaatttttgtgtcaatatctaattttccttgtaaa 481  Q
    |||||||||||||||||||||||||||||||| ||||| ||| |||| |||||||||| || |||||| |||||||    
T  20270623 tctcatactcacattatgtttttaatttctctttattgttttgatttatgtgtcaatacctcattttctttgtaaa 20270698  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #5
Raw Score: 48; E-Value: 3e-18
Query Start/End: Original strand, 397 - 481
Target Start/End: Original strand, 33599006 - 33599091
Alignment:
Q  397 aactatctttctcatactcacattatgttttta--atttctctctattgctttaatttttgtgtcaatatctaattttccttgtaaa 481  Q
    |||| ||||||||||||||||||||||||||||   ||||||||||||||||||| ||||||||||||||||  ||||| |||||||    
T  33599006 aactttctttctcatactcacattatgtttttactttttctctctattgctttaa-ttttgtgtcaatatctctttttctttgtaaa 33599091  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #6
Raw Score: 43; E-Value: 0.000000000000003
Query Start/End: Original strand, 406 - 509
Target Start/End: Original strand, 5168235 - 5168340
Alignment:
Q  406 tctcatactcacattatgtttttaatttctc--tctattgctttaatttttgtgtcaatatctaattttccttgtaaaattttggttgtttcaaaaattg 503  Q
    ||||||||||||||||| |||||| ||||||  ||||||||||| ||||||||| || || || |||||| |||||||||||| |||||  ||||| |||    
T  5168235 tctcatactcacattatctttttactttctctctctattgctttgatttttgtgccactacctcattttctttgtaaaattttagttgtcacaaaagttg 5168334  T
Q  504 taatat 509  Q
    | ||||    
T  5168335 tcatat 5168340  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #7
Raw Score: 43; E-Value: 0.000000000000003
Query Start/End: Original strand, 411 - 481
Target Start/End: Original strand, 6596390 - 6596460
Alignment:
Q  411 tactcacattatgtttttaatttctctctattgctttaatttttgtgtcaatatctaattttccttgtaaa 481  Q
    ||||||||||||||||||| |||||||||||||||||  ||||||||| |||| || |||||| |||||||    
T  6596390 tactcacattatgtttttactttctctctattgctttggtttttgtgttaatacctcattttctttgtaaa 6596460  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #8
Raw Score: 43; E-Value: 0.000000000000003
Query Start/End: Original strand, 406 - 481
Target Start/End: Complemental strand, 21943714 - 21943637
Alignment:
Q  406 tctcatactcacattatgtttttaatttctctct--attgctttaatttttgtgtcaatatctaattttccttgtaaa 481  Q
    ||||||| |||||||||||||||| |||||||||  |||||||| |||||| ||||||||||| |||||| |||||||    
T  21943714 tctcatattcacattatgtttttattttctctctttattgctttgatttttctgtcaatatcttattttctttgtaaa 21943637  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #9
Raw Score: 43; E-Value: 0.000000000000003
Query Start/End: Original strand, 406 - 468
Target Start/End: Complemental strand, 35075594 - 35075532
Alignment:
Q  406 tctcatactcacattatgtttttaatttctctctattgctttaatttttgtgtcaatatctaa 468  Q
    ||||||||||||||||| |||||| ||||||||||||||||| ||||||||  ||||||||||    
T  35075594 tctcatactcacattatatttttattttctctctattgctttgatttttgtaccaatatctaa 35075532  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #10
Raw Score: 43; E-Value: 0.000000000000003
Query Start/End: Original strand, 395 - 502
Target Start/End: Original strand, 36738989 - 36739098
Alignment:
Q  395 acaactatctttctcatactcacattatgtttttaatttctc--tctattgctttaatttttgtgtcaatatctaattttccttgtaaaattttggttgt 492  Q
    |||||| ||| ||||||||||||||||| |||||| ||||||  |||||||||||  ||||||||||| || || ||||   ||||||||||||||||||    
T  36738989 acaactttctctctcatactcacattatctttttactttctctctctattgctttggtttttgtgtcactacctcatttcttttgtaaaattttggttgt 36739088  T
Q  493 ttcaaaaatt 502  Q
      ||||||||    
T  36739089 cacaaaaatt 36739098  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #11
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 395 - 492
Target Start/End: Original strand, 2972364 - 2972464
Alignment:
Q  395 acaactatctttctcatactcacattat-gtttttaatttctc--tctattgctttaatttttgtgtcaatatctaattttccttgtaaaattttggttg 491  Q
    |||||| ||||||||||||||||||||| ||||||| ||||||  ||||||||||| ||||||||||||||| || |||| | | || |||||||| |||    
T  2972364 acaactttctttctcatactcacattatcgtttttactttctctctctattgctttgatttttgtgtcaatacctcatttccttcgtgaaattttgattg 2972463  T
Q  492 t 492  Q
    |    
T  2972464 t 2972464  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #12
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 397 - 502
Target Start/End: Complemental strand, 19844336 - 19844231
Alignment:
Q  397 aactatctttctcatactcacattatgtttttaatttctctctattgctttaatttttgtgtcaatatctaattttccttgtaaaattttggttgtttca 496  Q
    |||| ||| |||||||  ||||||||||||||| |||||||||||||||||  ||| |||| ||||| ||  ||||| |||||||||| ||||||| | |    
T  19844336 aactttctctctcatatccacattatgtttttactttctctctattgctttggtttgtgtgccaatacctctttttctttgtaaaattatggttgtctta 19844237  T
Q  497 aaaatt 502  Q
    ||||||    
T  19844236 aaaatt 19844231  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #13
Raw Score: 41; E-Value: 0.00000000000005
Query Start/End: Original strand, 395 - 492
Target Start/End: Complemental strand, 7287219 - 7287120
Alignment:
Q  395 acaactatctttctcatactcacattatgtttttaatttctctct--attgctttaatttttgtgtcaatatctaattttccttgtaaaattttggttgt 492  Q
    |||||| ||| | ||||||||||||||| |||||| |||||||||  |||| |||  ||||||||||| || || |||||| ||||||||||||||||||    
T  7287219 acaactttctctttcatactcacattatatttttactttctctctctattgttttggtttttgtgtcactacctcattttctttgtaaaattttggttgt 7287120  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #14
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 406 - 453
Target Start/End: Original strand, 11148564 - 11148611
Alignment:
Q  406 tctcatactcacattatgtttttaatttctctctattgctttaatttt 453  Q
    |||||||||||||||||||||||| ||||||||||||||||| |||||    
T  11148564 tctcatactcacattatgtttttactttctctctattgctttgatttt 11148611  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #15
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 410 - 502
Target Start/End: Original strand, 27487943 - 27488037
Alignment:
Q  410 atactcacattatgtttttaatttctc--tctattgctttaatttttgtgtcaatatctaattttccttgtaaaattttggttgtttcaaaaatt 502  Q
    |||||||| |||||| |||| ||||||  |||||||||||  |||||||| |||||| |||||||| |||||||||||| ||| | |||||||||    
T  27487943 atactcacgttatgtatttactttctctctctattgctttggtttttgtgccaatatttaattttctttgtaaaattttagttatctcaaaaatt 27488037  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #16
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 408 - 492
Target Start/End: Complemental strand, 33958276 - 33958190
Alignment:
Q  408 tcatactcacattatgtttttaatttctctct--attgctttaatttttgtgtcaatatctaattttccttgtaaaattttggttgt 492  Q
    ||||||||||||||| |||||| |||||||||  ||||||||  |||||||||||||||||  ||||| ||||||| || |||||||    
T  33958276 tcatactcacattatatttttactttctctctctattgctttggtttttgtgtcaatatctctttttctttgtaaatttatggttgt 33958190  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #17
Raw Score: 39; E-Value: 0.0000000000008
Query Start/End: Original strand, 408 - 491
Target Start/End: Original strand, 1274412 - 1274497
Alignment:
Q  408 tcatactcacattatgtttttaatt--tctctctattgctttaatttttgtgtcaatatctaattttccttgtaaaattttggttg 491  Q
    ||||||||||||||  |||||| ||  |||||||||||||||  ||||||||||||||||| |||  | |||||||||||||||||    
T  1274412 tcatactcacattacctttttacttcctctctctattgctttggtttttgtgtcaatatctcattccctttgtaaaattttggttg 1274497  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #18
Raw Score: 39; E-Value: 0.0000000000008
Query Start/End: Original strand, 397 - 504
Target Start/End: Original strand, 13309926 - 13310035
Alignment:
Q  397 aactatctttctcatactcacattatgtttttaatttctctctat--tgctttaatttttgtgtcaatatctaattttccttgtaaaattttggttgttt 494  Q
    |||| ||| ||||||| |||||||||||||||| ||||||||| |  | ||||  ||||||||| |||| || |||||| |||||||| |||| |||| |    
T  13309926 aactttctctctcatattcacattatgtttttactttctctctctactactttggtttttgtgttaatacctcattttctttgtaaaaatttgattgtct 13310025  T
Q  495 caaaaattgt 504  Q
    ||||||||||    
T  13310026 caaaaattgt 13310035  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #19
Raw Score: 39; E-Value: 0.0000000000008
Query Start/End: Original strand, 397 - 492
Target Start/End: Original strand, 35646426 - 35646523
Alignment:
Q  397 aactatctttctcatactcacattatgtttttaatttctctc--tattgctttaatttttgtgtcaatatctaattttccttgtaaaattttggttgt 492  Q
    |||| ||| ||||||||||||||||| |||||| ||||||||  |||||||||  ||||||||||| || || |||| | |||||||||||| |||||    
T  35646426 aactttctctctcatactcacattatttttttactttctctctatattgctttggtttttgtgtcactacctcatttcctttgtaaaattttagttgt 35646523  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #20
Raw Score: 39; E-Value: 0.0000000000008
Query Start/End: Original strand, 409 - 492
Target Start/End: Original strand, 39591735 - 39591820
Alignment:
Q  409 catactcacattatgtttttaatttctc--tctattgctttaatttttgtgtcaatatctaattttccttgtaaaattttggttgt 492  Q
    ||||||||||||||||| ||| ||||||  |||||||||||  ||| ||||||||| ||| |||||| |||||||| |||||||||    
T  39591735 catactcacattatgttgttactttctctctctattgctttggtttgtgtgtcaatctctcattttctttgtaaaactttggttgt 39591820  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #21
Raw Score: 39; E-Value: 0.0000000000008
Query Start/End: Original strand, 409 - 492
Target Start/End: Original strand, 39592127 - 39592212
Alignment:
Q  409 catactcacattatgtttttaatttctc--tctattgctttaatttttgtgtcaatatctaattttccttgtaaaattttggttgt 492  Q
    ||||||||||||||||| ||| ||||||  |||||||||||  ||| ||||||||| ||| |||||| |||||||| |||||||||    
T  39592127 catactcacattatgttgttactttctctctctattgctttggtttgtgtgtcaatctctcattttctttgtaaaactttggttgt 39592212  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #22
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 406 - 488
Target Start/End: Original strand, 4719703 - 4719787
Alignment:
Q  406 tctcatactcacattatgttttta--atttctctctattgctttaatttttgtgtcaatatctaattttccttgtaaaattttgg 488  Q
    ||||||||||||||||||||||||   ||||||||||||||||| ||||||||| |||||  |  ||||| ||| ||||||||||    
T  4719703 tctcatactcacattatgtttttactttttctctctattgctttgatttttgtgccaatactttcttttctttgcaaaattttgg 4719787  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #23
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 402 - 463
Target Start/End: Complemental strand, 36321818 - 36321757
Alignment:
Q  402 tctttctcatactcacattatgtttttaatttctctctattgctttaatttttgtgtcaata 463  Q
    ||||||||||||| ||||||| | |||| ||| ||||||||||||| |||||||||||||||    
T  36321818 tctttctcatacttacattatatgtttactttatctctattgcttttatttttgtgtcaata 36321757  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #24
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 395 - 492
Target Start/End: Complemental strand, 26791274 - 26791175
Alignment:
Q  395 acaactatctttctcatactcacattatgtttttaatttctctct--attgctttaatttttgtgtcaatatctaattttccttgtaaaattttggttgt 492  Q
    |||||| ||| |||||| |||||||||| |||||| |||||||||  ||||||||  |||||||| || || || |||| | ||||||||||||||||||    
T  26791274 acaactttctctctcatgctcacattatctttttactttctctctctattgctttggtttttgtgccactaactcatttcctttgtaaaattttggttgt 26791175  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #25
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 406 - 471
Target Start/End: Complemental strand, 35650006 - 35649940
Alignment:
Q  406 tctcatactcacattatgtttttaatt--tctctctattgctttaatttttgtgtcaatatctaattt 471  Q
    |||||||||||||||||||||||| ||  |||||||||||| |||| |||||||||||||||| ||||    
T  35650006 tctcatactcacattatgtttttactttctctctctattgcattaa-ttttgtgtcaatatcttattt 35649940  T

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Target: chr5; HSP #26
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 395 - 439
Target Start/End: Complemental strand, 37172784 - 37172740
Alignment:
Q  395 acaactatctttctcatactcacattatgtttttaatttctctct 439  Q
    |||||| ||||||||||||||||||| ||||||||||||||||||    
T  37172784 acaactttctttctcatactcacattgtgtttttaatttctctct 37172740  T

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Target: chr5; HSP #27
Raw Score: 36; E-Value: 0.00000000005
Query Start/End: Original strand, 408 - 483
Target Start/End: Complemental strand, 9168181 - 9168106
Alignment:
Q  408 tcatactcacattatgtttttaatttctctctattgctttaatttttgtgtcaatatctaattttccttgtaaaat 483  Q
    ||||||||||||||| |||||| |||||||||||||||||  |||||||| ||| |  || ||||| |||||||||    
T  9168181 tcatactcacattatatttttattttctctctattgctttggtttttgtgccaacacatacttttctttgtaaaat 9168106  T

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Target: chr5; HSP #28
Raw Score: 36; E-Value: 0.00000000005
Query Start/End: Original strand, 395 - 487
Target Start/End: Original strand, 39054628 - 39054722
Alignment:
Q  395 acaactatctttctcatactcacattatgtttttaatttctc--tctattgctttaatttttgtgtcaatatctaattttccttgtaaaattttg 487  Q
    |||||| ||| | ||| |||||||||||||||||| ||||||  ||||||||||| |||||||||  ||||| | |||||| ||| |||||||||    
T  39054628 acaactttctctttcacactcacattatgtttttactttctctctctattgctttgatttttgtgcaaatatatcattttctttgcaaaattttg 39054722  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #29
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 395 - 461
Target Start/End: Original strand, 26686923 - 26686989
Alignment:
Q  395 acaactatctttctcatactcacattatgtttttaatttctctctattgctttaatttttgtgtcaa 461  Q
    |||||| ||| ||||||| ||||||||| |||||| ||||||||||||| ||| |||||||| ||||    
T  26686923 acaactttctctctcatattcacattatatttttactttctctctattgttttgatttttgtatcaa 26686989  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #30
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 395 - 461
Target Start/End: Original strand, 26956654 - 26956720
Alignment:
Q  395 acaactatctttctcatactcacattatgtttttaatttctctctattgctttaatttttgtgtcaa 461  Q
    |||||| ||| ||||||| ||||||||| |||||| ||||||||||||| ||| |||||||| ||||    
T  26956654 acaactttctctctcatattcacattatatttttactttctctctattgttttgatttttgtatcaa 26956720  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #31
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 397 - 504
Target Start/End: Original strand, 35567544 - 35567653
Alignment:
Q  397 aactatctttctcatactcacattatgtttttaatttctc--tctattgctttaatttttgtgtcaatatctaattttccttgtaaaattttggttgttt 494  Q
    |||| ||| ||||||| | ||||||| |||||| ||||||  ||||||||||| | ||||||||||| | || |||||  |||||||||| ||||||| |    
T  35567544 aactttctctctcatatttacattatatttttactttctctctctattgctttgaattttgtgtcaaaaccttattttatttgtaaaattatggttgtgt 35567643  T
Q  495 caaaaattgt 504  Q
    ||||| ||||    
T  35567644 caaaagttgt 35567653  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #32
Raw Score: 34; E-Value: 0.0000000007
Query Start/End: Original strand, 395 - 485
Target Start/End: Original strand, 611906 - 611998
Alignment:
Q  395 acaactatctttctcatactcacattatgtttttaatt--tctctctattgctttaatttttgtgtcaatatctaattttccttgtaaaattt 485  Q
    |||||| ||| |||||||||||||||||  ||||| ||  |||||||| |||||| |||||||||||| || |||| |||| ||||| |||||    
T  611906 acaactttctctctcatactcacattatcattttattttctctctctactgctttgatttttgtgtcactacctaaatttctttgtataattt 611998  T

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Target: chr5; HSP #33
Raw Score: 34; E-Value: 0.0000000007
Query Start/End: Original strand, 406 - 492
Target Start/End: Original strand, 19952052 - 19952140
Alignment:
Q  406 tctcatactcacattatgtttttaatttc--tctctattgctttaatttttgtgtcaatatctaattttccttgtaaaattttggttgt 492  Q
    ||||||||||| |||||||||||| ||||  ||||||||| ||| ||||  | ||||||| ||||||||| ||||||| || |||||||    
T  19952052 tctcatactcatattatgtttttactttctatctctattgttttgatttccgcgtcaatacctaattttctttgtaaatttatggttgt 19952140  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #34
Raw Score: 34; E-Value: 0.0000000007
Query Start/End: Original strand, 406 - 460
Target Start/End: Complemental strand, 22649680 - 22649624
Alignment:
Q  406 tctcatactcacattatgtttttaatttctctc--tattgctttaatttttgtgtca 460  Q
    ||||||||||||||||| |||||| ||||||||  |||||||||| |||||||||||    
T  22649680 tctcatactcacattatctttttactttctctccatattgctttagtttttgtgtca 22649624  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #35
Raw Score: 34; E-Value: 0.0000000007
Query Start/End: Original strand, 406 - 492
Target Start/End: Complemental strand, 28306151 - 28306063
Alignment:
Q  406 tctcatactcacattatgtttttaatttctctct--attgctttaatttttgtgtcaatatctaattttccttgtaaaattttggttgt 492  Q
    ||||||||||||||||| || ||| |||||||||  ||||||||  | |||||| || || || |||||| ||||||||||||||||||    
T  28306151 tctcatactcacattatcttcttactttctctctctattgctttggtctttgtgccactacctcattttctttgtaaaattttggttgt 28306063  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #36
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 403 - 463
Target Start/End: Original strand, 3564589 - 3564649
Alignment:
Q  403 ctttctcatactcacattatgtttttaatttctctctattgctttaatttttgtgtcaata 463  Q
    |||| ||||||||| |||||||||||| ||||||||||||| |||  ||||| ||||||||    
T  3564589 ctttttcatactcatattatgtttttactttctctctattgatttggtttttttgtcaata 3564649  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #37
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 395 - 464
Target Start/End: Original strand, 14532546 - 14532617
Alignment:
Q  395 acaactatctttctcatactcacattatgtttttaatttc--tctctattgctttaatttttgtgtcaatat 464  Q
    |||||| ||| ||||||||||||||| |||||||| ||||  |||||||||||||  || ||||||||||||    
T  14532546 acaactttctctctcatactcacattttgtttttactttctttctctattgctttggttcttgtgtcaatat 14532617  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #38
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 395 - 460
Target Start/End: Complemental strand, 19522033 - 19521966
Alignment:
Q  395 acaactatctttctcatactcacattatgtttttaatt--tctctctattgctttaatttttgtgtca 460  Q
    |||||| ||| | ||||||||||||||| |||||| ||  ||||||||||||||| ||||||||||||    
T  19522033 acaactttctctttcatactcacattatctttttactttctctctctattgctttgatttttgtgtca 19521966  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #39
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 395 - 472
Target Start/End: Original strand, 20770173 - 20770251
Alignment:
Q  395 acaactatctttctcatactcacattatgtttttaattt--ctctctattgctttaatttttgtgtcaatatctaatttt 472  Q
    |||||| ||| ||||||||||||||||| |||||| |||  |||||||||||||| ||||| ||||||||| ||| ||||    
T  20770173 acaactttctctctcatactcacattat-tttttactttatctctctattgctttgattttcgtgtcaatacctactttt 20770251  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #40
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 408 - 493
Target Start/End: Original strand, 21156042 - 21156129
Alignment:
Q  408 tcatactcacattatgtttttaatttctct--ctattgctttaatttttgtgtcaatatctaattttccttgtaaaattttggttgtt 493  Q
    ||||||||||||||| |||| | |||||||  ||||||||||  |||||||| ||||  || |||||| ||||||||||||| |||||    
T  21156042 tcatactcacattatattttcactttctctttctattgctttggtttttgtgccaatcacttattttctttgtaaaattttgtttgtt 21156129  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #41
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 420 - 492
Target Start/End: Original strand, 21353212 - 21353284
Alignment:
Q  420 tatgtttttaatttctctctattgctttaatttttgtgtcaatatctaattttccttgtaaaattttggttgt 492  Q
    |||||||||| |||||||||||| ||||| ||||||||| ||||  |  ||||| |||||||||| |||||||    
T  21353212 tatgtttttactttctctctattactttagtttttgtgttaatacatctttttctttgtaaaattatggttgt 21353284  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #42
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 395 - 492
Target Start/End: Original strand, 22098297 - 22098396
Alignment:
Q  395 acaactatctttctcatactcacattatgtttttaatt--tctctctattgctttaatttttgtgtcaatatctaattttccttgtaaaattttggttgt 492  Q
    |||||| ||| ||||||||||||||||| |||||| ||  |||||||||| |||| || |||||| |||||  || ||||| |||||||| | |||||||    
T  22098297 acaactttctctctcatactcacattatatttttactttctctctctattactttgatatttgtgccaatacatacttttctttgtaaaaatgtggttgt 22098396  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #43
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 395 - 504
Target Start/End: Original strand, 27546105 - 27546218
Alignment:
Q  395 acaactatctttctcatactcacattatgtttttaattt----ctctctattgctttaatttttgtgtcaatatctaattttccttgtaaaattttggtt 490  Q
    |||||| | ||||||||||||||||||| |||||| |||    |||| | ||||||| |||||| |||||||||||| ||||| ||||| | || || ||    
T  27546105 acaactttatttctcatactcacattatatttttactttatatctctattttgctttgatttttatgtcaatatctatttttctttgtacatttatgatt 27546204  T
Q  491 gtttcaaaaattgt 504  Q
    || |||||| ||||    
T  27546205 gtctcaaaagttgt 27546218  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #44
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 395 - 504
Target Start/End: Complemental strand, 28467483 - 28467372
Alignment:
Q  395 acaactatctttctcatactcacattatgtttttaatttct--ctctattgctttaatttttgtgtcaatatctaattttccttgtaaaattttggttgt 492  Q
    |||||| ||||| | ||||||||||||| |||||| |||||  |||||||| |||  ||||||||||| |  || |||| | || |||||||||||||||    
T  28467483 acaactttcttttttatactcacattatctttttactttctcactctattgttttggtttttgtgtcactgcctcatttcctttataaaattttggttgt 28467384  T
Q  493 ttcaaaaattgt 504  Q
      ||||||||||    
T  28467383 cacaaaaattgt 28467372  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #45
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 406 - 463
Target Start/End: Original strand, 29463048 - 29463107
Alignment:
Q  406 tctcatactcacattatgtttttaatt--tctctctattgctttaatttttgtgtcaata 463  Q
    ||||||||||||||| |||||||| ||  ||||||||||||||| ||||||||| |||||    
T  29463048 tctcatactcacattttgtttttattttctctctctattgctttgatttttgtgccaata 29463107  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #46
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 408 - 467
Target Start/End: Complemental strand, 887677 - 887618
Alignment:
Q  408 tcatactcacattatgtttttaatttctctctattgctttaatttttgtgtcaatatcta 467  Q
    ||||||||||||| |||| ||| | | ||| ||||||||| |||||||||||||||||||    
T  887677 tcatactcacattgtgttcttattctttctttattgctttgatttttgtgtcaatatcta 887618  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #47
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 450 - 509
Target Start/End: Original strand, 17626084 - 17626143
Alignment:
Q  450 tttttgtgtcaatatctaattttccttgtaaaattttggttgtttcaaaaattgtaatat 509  Q
    |||||||||||||| || |||||| || ||||||||||||||| |||||| |||| ||||    
T  17626084 tttttgtgtcaatacctcattttctttataaaattttggttgtctcaaaagttgtcatat 17626143  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #48
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 406 - 493
Target Start/End: Original strand, 884494 - 884583
Alignment:
Q  406 tctcatactcacattatgtttttaatttctc--tctattgctttaatttttgtgtcaatatctaattttccttgtaaaattttggttgtt 493  Q
    ||||||||||||||||| |||||| ||||||  ||||||| ||| ||||||||| ||| |  || ||||| |||||||| | ||||||||    
T  884494 tctcatactcacattatatttttactttctctttctattgttttgatttttgtgccaacacatacttttcattgtaaaaatatggttgtt 884583  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #49
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 395 - 486
Target Start/End: Complemental strand, 1079982 - 1079889
Alignment:
Q  395 acaactatctttctcatactcacattatgtttttaatttctctctat--tgctttaatttttgtgtcaatatctaattttccttgtaaaatttt 486  Q
    |||||| ||| ||||||| ||||||||| |||||| ||||| |||||  ||||||   ||||||| ||||| || |||||| ||||||||||||    
T  1079982 acaactttctctctcatattcacattatctttttactttctttctatattgctttggattttgtgccaatacctcattttctttgtaaaatttt 1079889  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #50
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 433 - 467
Target Start/End: Complemental strand, 17247759 - 17247725
Alignment:
Q  433 tctctctattgctttaatttttgtgtcaatatcta 467  Q
    |||||||||| ||||||||||||||||||||||||    
T  17247759 tctctctattactttaatttttgtgtcaatatcta 17247725  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #51
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 395 - 441
Target Start/End: Original strand, 18395152 - 18395198
Alignment:
Q  395 acaactatctttctcatactcacattatgtttttaatttctctctat 441  Q
    |||||| ||||| |||||||||||||||||||||| ||| |||||||    
T  18395152 acaactttctttttcatactcacattatgtttttattttttctctat 18395198  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #52
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 396 - 509
Target Start/End: Original strand, 22972160 - 22972274
Alignment:
Q  396 caactatctttctcatactcacattatgtttttaatt-tctctctattgctttaatttttgtgtcaatatctaattttccttgtaaaattttggttgttt 494  Q
    ||||| ||||||| | |||||||||||| |||   || ||||||||||| |||  ||||||| | |||| || |||||| |||||||||||| ||||| |    
T  22972160 caactttctttctgaaactcacattatgatttactttctctctctattgttttggtttttgtattaataccttattttctttgtaaaattttagttgtct 22972259  T
Q  495 caaaaattgtaatat 509  Q
    ||||| |||| ||||    
T  22972260 caaaagttgttatat 22972274  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #53
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 395 - 492
Target Start/End: Complemental strand, 6940179 - 6940080
Alignment:
Q  395 acaactatctttctcatactcacattatgtttttaattt--ctctctattgctttaatttttgtgtcaatatctaattttcc-ttgtaaaattttggttg 491  Q
    |||||| ||| |||||||||||||| ||||||||| |||  |||||||||||||| ||||| ||| ||| | ||| |||||| ||||||| || ||||||    
T  6940179 acaactttctctctcatactcacat-atgtttttactttatctctctattgctttgattttcgtgccaaaacctacttttcctttgtaaatttatggttg 6940081  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #54
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 406 - 492
Target Start/End: Complemental strand, 7076587 - 7076499
Alignment:
Q  406 tctcatactcacattatgtttttaatttctctct--attgctttaatttttgtgtcaatatctaattttccttgtaaaattttggttgt 492  Q
    ||||||||||| ||||| |||||| |||||||||  ||||||||  |||||||| || ||  | |||| | ||||||||||||||||||    
T  7076587 tctcatactcatattatttttttactttctctctctattgctttggtttttgtgccattacttcatttcctttgtaaaattttggttgt 7076499  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #55
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 395 - 485
Target Start/End: Complemental strand, 13089811 - 13089719
Alignment:
Q  395 acaactatctttctcatactcacattatgtttttaattt--ctctctattgctttaatttttgtgtcaatatctaattttccttgtaaaattt 485  Q
    |||||| ||| | |||||||||||||||  || || |||  |||||||||||||| |||||||||||| || |||| |||| ||||| |||||    
T  13089811 acaactttctctttcatactcacattatcattctactttatctctctattgctttgatttttgtgtcactacctaaatttctttgtataattt 13089719  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #56
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 418 - 463
Target Start/End: Complemental strand, 13375674 - 13375629
Alignment:
Q  418 attatgtttttaatttctctctattgctttaatttttgtgtcaata 463  Q
    ||||| |||||| ||||||||||||| |||| ||||||||||||||    
T  13375674 attatatttttattttctctctattgttttagtttttgtgtcaata 13375629  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #57
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 395 - 453
Target Start/End: Complemental strand, 43196654 - 43196595
Alignment:
Q  395 acaactatctttctcatactcacattatgtttttaatt--tctctctattgctttaatttt 453  Q
    |||||| ||||||||||||||||||||| |||||| ||  ||||||||||||||| |||||    
T  43196654 acaactttctttctcatactcacattat-tttttactttatctctctattgctttgatttt 43196595  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #58
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 395 - 492
Target Start/End: Original strand, 1764265 - 1764364
Alignment:
Q  395 acaactatctttctcatactcacattatgtttttaatttctctc--tattgctttaatttttgtgtcaatatctaattttccttgtaaaattttggttgt 492  Q
    |||||| ||| ||||||||||||||| | |||||| ||||||||  |||||||||  ||||| || || || || |||| | || |||||||||||||||    
T  1764265 acaactttctctctcatactcacattttctttttactttctctctttattgctttggtttttatgccactacctcatttcctttctaaaattttggttgt 1764364  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #59
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 395 - 492
Target Start/End: Original strand, 16690541 - 16690640
Alignment:
Q  395 acaactatctttctcatactcacattatgtttttaatttc--tctctattgctttaatttttgtgtcaatatctaattttccttgtaaaattttggttgt 492  Q
    |||||| ||| | ||||||||||||||| |||||| ||||  |||||||||||||  |||||||| ||| |  || ||||| |||||||| | |||||||    
T  16690541 acaactttctctttcatactcacattatatttttactttctttctctattgctttggtttttgtgccaacacatacttttctttgtaaaaatatggttgt 16690640  T

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Target: chr5; HSP #60
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 395 - 439
Target Start/End: Original strand, 17990255 - 17990299
Alignment:
Q  395 acaactatctttctcatactcacattatgtttttaatttctctct 439  Q
    |||||| ||| |||||||||||||||||||||||| | |||||||    
T  17990255 acaactttctctctcatactcacattatgtttttattctctctct 17990299  T

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Target: chr5; HSP #61
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 395 - 492
Target Start/End: Complemental strand, 18258823 - 18258724
Alignment:
Q  395 acaactatctttctcatactcacattatgtttttaatttctctctat--tgctttaatttttgtgtcaatatctaattttccttgtaaaattttggttgt 492  Q
    |||||| ||| ||||||||| ||||||| |||||| ||| |||||||  | ||||  |||||||| || || || |||| | ||||||||||||||||||    
T  18258823 acaactttctctctcatacttacattatctttttattttttctctatatttctttggtttttgtgccactacctcatttcctttgtaaaattttggttgt 18258724  T

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Target: chr5; HSP #62
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 395 - 439
Target Start/End: Original strand, 19127165 - 19127209
Alignment:
Q  395 acaactatctttctcatactcacattatgtttttaatttctctct 439  Q
    |||||| ||| |||||||||||||||||||||||| | |||||||    
T  19127165 acaactctctctctcatactcacattatgtttttattctctctct 19127209  T

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Target: chr5; HSP #63
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 404 - 453
Target Start/End: Complemental strand, 21353537 - 21353486
Alignment:
Q  404 tttctcatactcacattatgtttttaatt--tctctctattgctttaatttt 453  Q
    |||||||||||||||||||||||||| ||  | ||||||||||||| |||||    
T  21353537 tttctcatactcacattatgtttttagtttatttctctattgctttgatttt 21353486  T

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Target: scaffold0087 (Bit Score: 44; Significance: 8e-16; HSPs: 1)
Name: scaffold0087
Description:

Target: scaffold0087; HSP #1
Raw Score: 44; E-Value: 8e-16
Query Start/End: Original strand, 408 - 492
Target Start/End: Complemental strand, 53378 - 53292
Alignment:
Q  408 tcatactcacattatgtttttaatttctctctatt--gctttaatttttgtgtcaatatctaattttccttgtaaaattttggttgt 492  Q
    |||||||||||||||||||||| ||||||||| ||  | |||| ||||||||||||||||| |||||| || |||| ||||||||||    
T  53378 tcatactcacattatgtttttattttctctctcttttgttttagtttttgtgtcaatatctcattttctttataaatttttggttgt 53292  T

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Target: scaffold0519 (Bit Score: 40; Significance: 0.0000000000002; HSPs: 1)
Name: scaffold0519
Description:

Target: scaffold0519; HSP #1
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 395 - 489
Target Start/End: Original strand, 11822 - 11919
Alignment:
Q  395 acaactatctttctcatactcacattatgtttttaattt---ctctctattgctttaatttttgtgtcaatatctaattttccttgtaaaattttggt 489  Q
    |||||| ||| ||||||||| |||||||  |||| ||||   ||||||||||||||  |||||||||||||| || |||||| |||||||||||||||    
T  11822 acaactttctctctcatacttacattattctttttattttctctctctattgctttggtttttgtgtcaatacctcattttctttgtaaaattttggt 11919  T

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Target: scaffold0128 (Bit Score: 39; Significance: 0.0000000000008; HSPs: 1)
Name: scaffold0128
Description:

Target: scaffold0128; HSP #1
Raw Score: 39; E-Value: 0.0000000000008
Query Start/End: Original strand, 395 - 485
Target Start/End: Original strand, 10978 - 11068
Alignment:
Q  395 acaactatctttctcatactcacattatgtttttaatttctctctattgctttaatttttgtgtcaatatctaattttccttgtaaaattt 485  Q
    |||||| ||| |||||||||||||||||  ||||| | ||||||||||||||| ||||||||| || || |||| |||| ||||| |||||    
T  10978 acaactttctctctcatactcacattatcattttactctctctctattgctttgatttttgtgccactaactaaatttctttgtataattt 11068  T

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Target: scaffold0184 (Bit Score: 36; Significance: 0.00000000005; HSPs: 1)
Name: scaffold0184
Description:

Target: scaffold0184; HSP #1
Raw Score: 36; E-Value: 0.00000000005
Query Start/End: Original strand, 395 - 481
Target Start/End: Complemental strand, 16817 - 16730
Alignment:
Q  395 acaactatctttctcatactcacattatgtttttaatttctctc-tattgctttaatttttgtgtcaatatctaattttccttgtaaa 481  Q
    |||||| ||| ||||||||||||||||| ||| || |||||||| |||||||||| |||||||  ||||| || |||||| |||||||    
T  16817 acaactttctctctcatactcacattatctttatactttctctcttattgctttagtttttgtaccaatacctcattttctttgtaaa 16730  T

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Target: scaffold0078 (Bit Score: 36; Significance: 0.00000000005; HSPs: 1)
Name: scaffold0078
Description:

Target: scaffold0078; HSP #1
Raw Score: 36; E-Value: 0.00000000005
Query Start/End: Original strand, 395 - 481
Target Start/End: Original strand, 56027 - 56114
Alignment:
Q  395 acaactatctttctcatactcacattatgtttttaatttctctc-tattgctttaatttttgtgtcaatatctaattttccttgtaaa 481  Q
    |||||| ||| ||||||||||||||||| ||| || |||||||| |||||||||| |||||||  ||||| || |||||| |||||||    
T  56027 acaactttctctctcatactcacattatctttatactttctctcttattgctttagtttttgtaccaatacctcattttctttgtaaa 56114  T

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Target: scaffold0098 (Bit Score: 35; Significance: 0.0000000002; HSPs: 1)
Name: scaffold0098
Description:

Target: scaffold0098; HSP #1
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 395 - 490
Target Start/End: Original strand, 49336 - 49433
Alignment:
Q  395 acaactatctttctcatactcacattatgtttttaatttct--ctctattgctttaatttttgtgtcaatatctaattttccttgtaaaattttggtt 490  Q
    |||||| ||| ||||||||||||||||| |||||| |||||  |||||||  |||  ||||||||||| || || |||| | ||||||||||||||||    
T  49336 acaactttctctctcatactcacattatctttttactttctcactctattattttggtttttgtgtcactacctcatttcctttgtaaaattttggtt 49433  T

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Target: scaffold0067 (Bit Score: 34; Significance: 0.0000000007; HSPs: 1)
Name: scaffold0067
Description:

Target: scaffold0067; HSP #1
Raw Score: 34; E-Value: 0.0000000007
Query Start/End: Original strand, 406 - 492
Target Start/End: Original strand, 35573 - 35663
Alignment:
Q  406 tctcatactcacattatgtttttaatttctc----tctattgctttaatttttgtgtcaatatctaattttccttgtaaaattttggttgt 492  Q
    ||||||||||| ||||| |||||| ||||||    |||||||||||  ||||||||||| || || |||||| ||||||||||||| ||||    
T  35573 tctcatactcatattatctttttactttctctctctctattgctttggtttttgtgtcactacctcattttctttgtaaaattttgattgt 35663  T

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Target: scaffold0148 (Bit Score: 33; Significance: 0.000000003; HSPs: 1)
Name: scaffold0148
Description:

Target: scaffold0148; HSP #1
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 414 - 487
Target Start/End: Complemental strand, 20912 - 20837
Alignment:
Q  414 tcacattatgtttttaatttctct--ctattgctttaatttttgtgtcaatatctaattttccttgtaaaattttg 487  Q
    |||||||||||||||| |||||||  |||||||||| |||||| |  |||||  |||||||||||| |||||||||    
T  20912 tcacattatgtttttactttctctttctattgctttgatttttctaccaatacataattttccttgcaaaattttg 20837  T

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Target: scaffold0056 (Bit Score: 33; Significance: 0.000000003; HSPs: 1)
Name: scaffold0056
Description:

Target: scaffold0056; HSP #1
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 395 - 492
Target Start/End: Complemental strand, 76649 - 76550
Alignment:
Q  395 acaactatctttctcatactcacattatgtttttaatttctctct--attgctttaatttttgtgtcaatatctaattttccttgtaaaattttggttgt 492  Q
    |||||| ||| |||||||| |||||||| |||| | |||||||||  ||||||||  |||||||| || || || |||| | ||||||||||||||||||    
T  76649 acaactttctctctcatacccacattatcttttcactttctctctctattgctttggtttttgtgccactacctcatttcctttgtaaaattttggttgt 76550  T

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Target: scaffold0662 (Bit Score: 32; Significance: 0.00000001; HSPs: 1)
Name: scaffold0662
Description:

Target: scaffold0662; HSP #1
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 395 - 482
Target Start/End: Original strand, 1188 - 1275
Alignment:
Q  395 acaactatctttctcatactcacattatgtttttaatttctctctattgctttaatttttgtgtcaatatctaattttccttgtaaaa 482  Q
    |||||| ||| | ||||||||||| ||| | |||| |||||||||||||||||  |||||||| |||||  || ||||| ||||||||    
T  1188 acaactttctctttcatactcacaatatatctttattttctctctattgctttggtttttgtgccaatagatacttttctttgtaaaa 1275  T

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Target: scaffold0013 (Bit Score: 32; Significance: 0.00000001; HSPs: 1)
Name: scaffold0013
Description:

Target: scaffold0013; HSP #1
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 406 - 481
Target Start/End: Original strand, 90012 - 90087
Alignment:
Q  406 tctcatactcacattatgtttttaatttctctctattgctttaatttttgtgtcaatatctaattttccttgtaaa 481  Q
    ||||||||||| || ||||||||| ||| |||||||| ||||  ||||| ||||||||  |||||||| |||||||    
T  90012 tctcatactcatatcatgtttttactttttctctattcctttggtttttatgtcaatacttaattttctttgtaaa 90087  T

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Target: scaffold0687 (Bit Score: 31; Significance: 0.00000005; HSPs: 1)
Name: scaffold0687
Description:

Target: scaffold0687; HSP #1
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 402 - 463
Target Start/End: Complemental strand, 1368 - 1309
Alignment:
Q  402 tctttctcatactcacattatgtttttaatttctctctattgctttaatttttgtgtcaata 463  Q
    ||||| |||||||||| |||||||||||  |||||||||||||| || |||| |||||||||    
T  1368 tctttttcatactcactttatgttttta--ttctctctattgctatagttttcgtgtcaata 1309  T

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Target: scaffold0085 (Bit Score: 31; Significance: 0.00000005; HSPs: 1)
Name: scaffold0085
Description:

Target: scaffold0085; HSP #1
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 395 - 462
Target Start/End: Complemental strand, 22883 - 22814
Alignment:
Q  395 acaactatctttctcatactcacattatgtttttaatttctc--tctattgctttaatttttgtgtcaat 462  Q
    |||||| | ||||| ||||||||||| | |||||||||||||  |||||||||||  |||||||||||||    
T  22883 acaactttatttcttatactcacattgtttttttaatttctctttctattgctttggtttttgtgtcaat 22814  T

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Target: scaffold0592 (Bit Score: 30; Significance: 0.0000002; HSPs: 1)
Name: scaffold0592
Description:

Target: scaffold0592; HSP #1
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 406 - 439
Target Start/End: Original strand, 962 - 995
Alignment:
Q  406 tctcatactcacattatgtttttaatttctctct 439  Q
    |||||||||||||||||||||||| |||||||||    
T  962 tctcatactcacattatgtttttattttctctct 995  T

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Target: scaffold0027 (Bit Score: 30; Significance: 0.0000002; HSPs: 1)
Name: scaffold0027
Description:

Target: scaffold0027; HSP #1
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 406 - 464
Target Start/End: Original strand, 121688 - 121748
Alignment:
Q  406 tctcatactcacattatgtttttaatttc--tctctattgctttaatttttgtgtcaatat 464  Q
    ||||||||||||||||| |||||| ||||  |||| ||| ||||||||||| |||||||||    
T  121688 tctcatactcacattatatttttactttctttctccattactttaatttttatgtcaatat 121748  T

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Target: scaffold0199 (Bit Score: 29; Significance: 0.0000007; HSPs: 1)
Name: scaffold0199
Description:

Target: scaffold0199; HSP #1
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 395 - 492
Target Start/End: Original strand, 8709 - 8808
Alignment:
Q  395 acaactatctttctcatactcacattatgtttttaatttctctctat--tgctttaatttttgtgtcaatatctaattttccttgtaaaattttggttgt 492  Q
    |||||| ||| | ||||||||| ||||| ||||||  |||||||| |  ||||||  ||||||||||| || || |||| | ||||||||||||||||||    
T  8709 acaactttctctttcatactcatattatctttttacgttctctctctgttgctttggtttttgtgtcactacctcatttcctttgtaaaattttggttgt 8808  T

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Target: scaffold0174 (Bit Score: 29; Significance: 0.0000007; HSPs: 1)
Name: scaffold0174
Description:

Target: scaffold0174; HSP #1
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 395 - 435
Target Start/End: Complemental strand, 34823 - 34783
Alignment:
Q  395 acaactatctttctcatactcacattatgtttttaatttct 435  Q
    |||||| ||| |||||||||||||||||||||||| |||||    
T  34823 acaactttctctctcatactcacattatgtttttactttct 34783  T

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Target: scaffold0041 (Bit Score: 29; Significance: 0.0000007; HSPs: 1)
Name: scaffold0041
Description:

Target: scaffold0041; HSP #1
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 407 - 492
Target Start/End: Complemental strand, 10981 - 10894
Alignment:
Q  407 ctcatactcacattatgtttttaatt--tctctctattgctttaatttttgtgtcaatatctaattttccttgtaaaattttggttgt 492  Q
    |||||||||||||||| |||||| ||  ||||||||||  ||| |||||||||| | || || |||||| || |||||||||| ||||    
T  10981 ctcatactcacattatctttttactttctctctctattattttgatttttgtgttactacctcattttctttataaaattttgattgt 10894  T

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Target: scaffold0002 (Bit Score: 29; Significance: 0.0000007; HSPs: 1)
Name: scaffold0002
Description:

Target: scaffold0002; HSP #1
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 395 - 472
Target Start/End: Complemental strand, 469667 - 469588
Alignment:
Q  395 acaactatctttctcatactcacattatgtttttaatttctctct--attgctttaatttttgtgtcaatatctaatttt 472  Q
    |||||| ||| ||||| |||||||||||||| ||| |||||||||  ||| |||| |||||||| |||||| || |||||    
T  469667 acaactttctctctcacactcacattatgttattactttctctctccattactttgatttttgtatcaatacctcatttt 469588  T

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