View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF14623_high_15 (Length: 349)
Name: NF14623_high_15
Description: NF14623
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF14623_high_15 |
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Alignment Details
Target: chr7 (Bit Score: 285; Significance: 1e-160; HSPs: 1)
Name: chr7
Description:
Target: chr7; HSP #1
Raw Score: 285; E-Value: 1e-160
Query Start/End: Original strand, 21 - 333
Target Start/End: Original strand, 45758823 - 45759134
Alignment:
| Q |
21 |
aatgcagatatttaagcaaccccaagagttaaactttgtgctctaaactctaaattggaaatcctaacgcatacatgcaaaaacaatttccactctgcaa |
120 |
Q |
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| T |
45758823 |
aatgcagatatttaagcaacctcaagagttaaactttgtgctctaaactctaaattggaaatcctaacgcatacatgcaaaaacaatttccaccctgcaa |
45758922 |
T |
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| Q |
121 |
tattcaaagatgatcccaagttcacaacctcaataacaatctaataaatctaacaataaaaactaacaacgaggtattaacaaggtgaaaaaagtagatg |
220 |
Q |
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| T |
45758923 |
tattcaaagatgatcccaagttcacaacctcaataacatt-taataaatctaacaaaaaaaactaacaacgaggtattaacaaggggaaaaaagtagatg |
45759021 |
T |
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| Q |
221 |
aaccattatgagataccaactgattatgatagtaattaacatgcatatttcttgttatatagtgaagatgttactgaatacacagtccatagtacaaaat |
320 |
Q |
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|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
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| T |
45759022 |
aaccattatgagataccaactgattatgatagtaattaacatgcatatttcttgttatatagtgaagatgttactgaatacacagtccatagtacaaaat |
45759121 |
T |
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| Q |
321 |
tgacattgttcat |
333 |
Q |
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||||||||||||| |
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| T |
45759122 |
tgacattgttcat |
45759134 |
T |
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