View Alignment

This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.

Legend
 Query
 Query hiting target  Query hiting target's complemental strand
 Query's complemental strand hiting target  Query's complemental strand hiting target's complemental strand

Alignment Overview

Query: NF14623_high_18 (Length: 310)

Name: NF14623_high_18
Description: NF14623
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)


[»] NF14623_high_18
NF14623_high_18
[»] chr3 (12 HSPs)
chr3 (18-298)||(9377855-9378135)
chr3 (18-242)||(9353670-9353894)
chr3 (71-215)||(9344641-9344785)
chr3 (71-194)||(9449097-9449217)
chr3 (137-198)||(9417365-9417426)
chr3 (71-167)||(9341533-9341629)
chr3 (137-198)||(9398602-9398663)
chr3 (131-198)||(9441026-9441093)
chr3 (131-181)||(9408176-9408226)
chr3 (105-167)||(9348837-9348899)
chr3 (105-167)||(9370491-9370553)
chr3 (139-196)||(41986548-41986605)
[»] chr6 (10 HSPs)
chr6 (111-220)||(28177181-28177290)
chr6 (111-220)||(28219948-28220057)
chr6 (111-215)||(28133079-28133183)
chr6 (123-220)||(28177051-28177148)
chr6 (71-245)||(9158636-9158810)
chr6 (71-245)||(9171618-9171792)
chr6 (139-215)||(28132954-28133030)
chr6 (123-215)||(28219823-28219915)
chr6 (79-198)||(7042272-7042391)
chr6 (92-198)||(7047622-7047731)
[»] scaffold0038 (2 HSPs)
scaffold0038 (111-220)||(20446-20555)
scaffold0038 (123-215)||(20321-20413)
[»] chr1 (1 HSPs)
chr1 (123-198)||(4440664-4440739)
[»] scaffold0455 (1 HSPs)
scaffold0455 (139-215)||(10860-10936)
[»] chr5 (1 HSPs)
chr5 (71-198)||(18571856-18571986)


Alignment Details
Target: chr3 (Bit Score: 277; Significance: 1e-155; HSPs: 12)
Name: chr3
Description:

Target: chr3; HSP #1
Raw Score: 277; E-Value: 1e-155
Query Start/End: Original strand, 18 - 298
Target Start/End: Original strand, 9377855 - 9378135
Alignment:
Q  18 gatgttatcaatgatctcgttgttgttgttgatggaatctggtgcaggaacatatttgagaagtgggaattggaagggtaaaatgttatggtcatttgga 117  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  9377855 gatgttatcaatgatctcgttgttgttgttgatggaatctggtgcaggaacatatttgagaagtgggaattggaagggtaaaatgttatggtcatttgga 9377954  T
Q  118 atgggagaagagtgccaagttgaacaaaccgatcgaaaacgaatgagatcaagttcaacgtcgaggcgttgtgatatcagaaagagaatatcccttggca 217  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |    
T  9377955 atgggagaagagtgccaagttgaacaaaccgatcgaaaacgaatgagatcaagttcaacgtcgaggcgttgtgatatcagaaagagaatatcccttggaa 9378054  T
Q  218 gctcagtccagtccaccgacgccatggaagtaactgtgaaggtgcaaaaagaacgctagtaaataataaatggcaaacgat 298  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  9378055 gctcagtccagtccaccgacgccatggaagtaactgtgaaggtgcaaaaagaacgctagtaaataataaatggcaaacgat 9378135  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #2
Raw Score: 169; E-Value: 1e-90
Query Start/End: Original strand, 18 - 242
Target Start/End: Original strand, 9353670 - 9353894
Alignment:
Q  18 gatgttatcaatgatctcgttgttgttgttgatggaatctggtgcaggaacatatttgagaagtgggaattggaagggtaaaatgttatggtcatttgga 117  Q
    |||||||||||||||||||||||||||| |||||||||||||||  ||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  9353670 gatgttatcaatgatctcgttgttgttgctgatggaatctggtgttggaacatatttgagaagtgggaattggaagggtaaaatgttatggtcatttgga 9353769  T
Q  118 atgggagaagagtgccaagttgaacaaaccgatcgaaaacgaatgagatcaagttcaacgtcgaggcgttgtgatatcagaaagagaatatcccttggca 217  Q
    || || |||||| |||||||||||||||| |||||||||||||||||||||||||| ||||| |||||||||||||||||||||| ||||||| |||| |    
T  9353770 atcggggaagagcgccaagttgaacaaactgatcgaaaacgaatgagatcaagttctacgtcaaggcgttgtgatatcagaaagataatatcctttggaa 9353869  T
Q  218 gctcagtccagtccaccgacgccat 242  Q
    |||||| ||||||||| ||||||||    
T  9353870 gctcagaccagtccactgacgccat 9353894  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #3
Raw Score: 61; E-Value: 3e-26
Query Start/End: Original strand, 71 - 215
Target Start/End: Original strand, 9344641 - 9344785
Alignment:
Q  71 atttgagaagtgggaattggaagggtaaaatgttatggtcatttggaatgggagaagagtgccaagttgaacaaaccgatcgaaaacgaatgagatcaag 170  Q
    ||||||| |||||||| |  ||||||||||||||||| | ||| || |||| ||||||||||||| | |||||||| |||||||| ||||||||||||||    
T  9344641 atttgaggagtgggaacttaaagggtaaaatgttatgatgattggggatggaagaagagtgccaattggaacaaacagatcgaaagcgaatgagatcaag 9344740  T
Q  171 ttcaacgtcgaggcgttgtgatatcagaaagagaatatcccttgg 215  Q
    ||||  |||||||||||| ||||| |||  ||||| |||| ||||    
T  9344741 ttcattgtcgaggcgttgcgatataagattgagaagatcctttgg 9344785  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #4
Raw Score: 46; E-Value: 3e-17
Query Start/End: Original strand, 71 - 194
Target Start/End: Original strand, 9449097 - 9449217
Alignment:
Q  71 atttgagaagtgggaattggaagggtaaaatgttatggtcatttggaatgggagaagagtgccaagttgaacaaaccgatcgaaaacgaatgagatcaag 170  Q
    ||||||| |||||||||| |||||||||||||||||| | |||||| ||||   ||| |  |||| | |||||||| |||||||||||||||||||| ||    
T  9449097 atttgaggagtgggaatttgaagggtaaaatgttatgatgatttgggatgg---aagtgcaccaaatggaacaaactgatcgaaaacgaatgagatcgag 9449193  T
Q  171 ttcaacgtcgaggcgttgtgatat 194  Q
    ||||  |||||| | |||||||||    
T  9449194 ttcattgtcgagcctttgtgatat 9449217  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #5
Raw Score: 42; E-Value: 0.000000000000007
Query Start/End: Original strand, 137 - 198
Target Start/End: Original strand, 9417365 - 9417426
Alignment:
Q  137 ttgaacaaaccgatcgaaaacgaatgagatcaagttcaacgtcgaggcgttgtgatatcaga 198  Q
    |||||||||||||||||||| ||||||||||||||||| |||| |  |||||||||||||||    
T  9417365 ttgaacaaaccgatcgaaaatgaatgagatcaagttcatcgtcaattcgttgtgatatcaga 9417426  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #6
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 71 - 167
Target Start/End: Original strand, 9341533 - 9341629
Alignment:
Q  71 atttgagaagtgggaattggaagggtaaaatgttatggtcatttggaatgggagaagagtgccaagttgaacaaaccgatcgaaaacgaatgagatc 167  Q
    ||||||| |||||||||| ||||||||| |||||||||| |||||| ||||  |||||  ||||| | |||||||  |||||||| |||||||||||    
T  9341533 atttgaggagtgggaatttgaagggtaagatgttatggtgatttgggatggaggaagaacgccaattggaacaaatggatcgaaatcgaatgagatc 9341629  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #7
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 137 - 198
Target Start/End: Original strand, 9398602 - 9398663
Alignment:
Q  137 ttgaacaaaccgatcgaaaacgaatgagatcaagttcaacgtcgaggcgttgtgatatcaga 198  Q
    |||||||||||||||||||| ||||||||||||||||| |||| |  ||||| |||||||||    
T  9398602 ttgaacaaaccgatcgaaaatgaatgagatcaagttcatcgtcaattcgttgggatatcaga 9398663  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #8
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 131 - 198
Target Start/End: Complemental strand, 9441093 - 9441026
Alignment:
Q  131 gccaagttgaacaaaccgatcgaaaacgaatgagatcaagttcaacgtcgaggcgttgtgatatcaga 198  Q
    |||| |||||||| || |||||||||||||||||||| |||||| ||||||  ||||| |||||||||    
T  9441093 gccacgttgaacatacagatcgaaaacgaatgagatcgagttcatcgtcgattcgttgcgatatcaga 9441026  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #9
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 131 - 181
Target Start/End: Original strand, 9408176 - 9408226
Alignment:
Q  131 gccaagttgaacaaaccgatcgaaaacgaatgagatcaagttcaacgtcga 181  Q
    |||| ||||||||||||||||||||| |||||||||| |||||| ||||||    
T  9408176 gccacgttgaacaaaccgatcgaaaatgaatgagatcgagttcatcgtcga 9408226  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #10
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 105 - 167
Target Start/End: Original strand, 9348837 - 9348899
Alignment:
Q  105 atggtcatttggaatgggagaagagtgccaagttgaacaaaccgatcgaaaacgaatgagatc 167  Q
    ||||| |||||||||||  |||||| ||||| | |||||||  ||||||||||||||||||||    
T  9348837 atggtgatttggaatggaggaagagcgccaattggaacaaattgatcgaaaacgaatgagatc 9348899  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #11
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 105 - 167
Target Start/End: Original strand, 9370491 - 9370553
Alignment:
Q  105 atggtcatttggaatgggagaagagtgccaagttgaacaaaccgatcgaaaacgaatgagatc 167  Q
    ||||| |||||||||||  |||||| ||||| | |||||||  ||||||||||||||||||||    
T  9370491 atggtgatttggaatggaggaagagcgccaattggaacaaattgatcgaaaacgaatgagatc 9370553  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #12
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 139 - 196
Target Start/End: Original strand, 41986548 - 41986605
Alignment:
Q  139 gaacaaaccgatcgaaaacgaatgagatcaagttcaacgtcgaggcgttgtgatatca 196  Q
    |||||||| ||||| ||||||||||||||||| |||  |||||  |||||||||||||    
T  41986548 gaacaaactgatcggaaacgaatgagatcaagatcattgtcgaatcgttgtgatatca 41986605  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6 (Bit Score: 46; Significance: 3e-17; HSPs: 10)
Name: chr6
Description:

Target: chr6; HSP #1
Raw Score: 46; E-Value: 3e-17
Query Start/End: Original strand, 111 - 220
Target Start/End: Original strand, 28177181 - 28177290
Alignment:
Q  111 atttggaatgggagaagagtgccaagttgaacaaaccgatcgaaaacgaatgagatcaagttcaacgtcgaggcgttgtgatatcagaaagagaatatcc 210  Q
    ||||||||||| ||||||||| ||| | |||| |||  ||||||||||||||||||| ||||||  |||||| |||||||||||||||  ||||| ||||    
T  28177181 atttggaatggaagaagagtgtcaattggaacgaacatatcgaaaacgaatgagatcgagttcattgtcgagtcgttgtgatatcagattgagaagatcc 28177280  T
Q  211 cttggcagct 220  Q
     |||| ||||    
T  28177281 tttggaagct 28177290  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #2
Raw Score: 42; E-Value: 0.000000000000007
Query Start/End: Original strand, 111 - 220
Target Start/End: Original strand, 28219948 - 28220057
Alignment:
Q  111 atttggaatgggagaagagtgccaagttgaacaaaccgatcgaaaacgaatgagatcaagttcaacgtcgaggcgttgtgatatcagaaagagaatatcc 210  Q
    ||||||||| | ||||||||| ||| |  ||| ||| |||||||||||||||||||| ||||||  |||||| |||||||||||||||  ||||| ||||    
T  28219948 atttggaatagaagaagagtgtcaattgaaacgaacagatcgaaaacgaatgagatcgagttcattgtcgagtcgttgtgatatcagattgagaagatcc 28220047  T
Q  211 cttggcagct 220  Q
     |||| ||||    
T  28220048 tttggaagct 28220057  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #3
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 111 - 215
Target Start/End: Original strand, 28133079 - 28133183
Alignment:
Q  111 atttggaatgggagaagagtgccaagttgaacaaaccgatcgaaaacgaatgagatcaagttcaacgtcgaggcgttgtgatatcagaaagagaatatcc 210  Q
    ||||||||||| ||||||||||||| |  ||||||| |||| |||||||||| |||| ||||||  | |||| |||||||||||||||  ||||| ||||    
T  28133079 atttggaatggaagaagagtgccaattgaaacaaactgatcaaaaacgaatgtgatcgagttcattgccgagtcgttgtgatatcagattgagaagatcc 28133178  T
Q  211 cttgg 215  Q
     ||||    
T  28133179 tttgg 28133183  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #4
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 123 - 220
Target Start/End: Complemental strand, 28177148 - 28177051
Alignment:
Q  123 agaagagtgccaagttgaacaaaccgatcgaaaacgaatgagatcaagttcaacgtcgaggcgttgtgatatcagaaagagaatatcccttggcagct 220  Q
    ||||||||||||| | |||||||| |||||||||| ||||||||| | ||||  ||||||  ||||||||||||||  ||||| |||| |||| ||||    
T  28177148 agaagagtgccaattggaacaaacagatcgaaaacaaatgagatcgacttcactgtcgagttgttgtgatatcagattgagaagatcctttggaagct 28177051  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #5
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 71 - 245
Target Start/End: Complemental strand, 9158810 - 9158636
Alignment:
Q  71 atttgagaagtgggaattggaagggtaaaatgttatggtcatttggaatgggagaagagtgccaagttgaacaaaccgatcgaaaacgaatgagatcaag 170  Q
    ||||||| |||||||| | ||||||| |||||  ||| | ||| || | ||  |||||| |||| ||||||||||| ||| |||| |||||||||||||     
T  9158810 atttgaggagtgggaacttgaagggtgaaatgggatgatgattggggacggaggaagagcgccatgttgaacaaactgattgaaagcgaatgagatcaac 9158711  T
Q  171 ttcaacgtcgaggcgttgtgatatcagaaagagaatatcccttggcagctcagtccagtccaccgacgccatgga 245  Q
    |||  | | ||  |||||||||||||||  ||||| |||| |||| || | ||||||||| ||||  ||||||||    
T  9158710 ttcgtcattgattcgttgtgatatcagattgagaagatcctttggaagtttagtccagtcgaccgctgccatgga 9158636  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #6
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 71 - 245
Target Start/End: Original strand, 9171618 - 9171792
Alignment:
Q  71 atttgagaagtgggaattggaagggtaaaatgttatggtcatttggaatgggagaagagtgccaagttgaacaaaccgatcgaaaacgaatgagatcaag 170  Q
    ||||||| |||||||| | ||||||| |||||  ||| | ||| || | ||  |||||| |||| ||||||||||| ||| |||| ||||||||||| |     
T  9171618 atttgaggagtgggaacttgaagggtgaaatgggatgatgattggggacggaggaagagcgccatgttgaacaaactgattgaaagcgaatgagatcgac 9171717  T
Q  171 ttcaacgtcgaggcgttgtgatatcagaaagagaatatcccttggcagctcagtccagtccaccgacgccatgga 245  Q
    |||| | | ||  |||||||||||||||  ||||| |||| |||| || | ||||||||| ||||  ||||||||    
T  9171718 ttcatcatagattcgttgtgatatcagattgagaagatcctttggaagtttagtccagtcgaccgctgccatgga 9171792  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #7
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 139 - 215
Target Start/End: Complemental strand, 28133030 - 28132954
Alignment:
Q  139 gaacaaaccgatcgaaaacgaatgagatcaagttcaacgtcgaggcgttgtgatatcagaaagagaatatcccttgg 215  Q
    |||||||| |||||| ||||||||||||||||||||  | |||| ||||| |||||||||  ||||| |||| ||||    
T  28133030 gaacaaacagatcgataacgaatgagatcaagttcattgacgagtcgttgagatatcagattgagaagatcctttgg 28132954  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #8
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 123 - 215
Target Start/End: Complemental strand, 28219915 - 28219823
Alignment:
Q  123 agaagagtgccaagttgaacaaaccgatcgaaaacgaatgagatcaagttcaacgtcgaggcgttgtgatatcagaaagagaatatcccttgg 215  Q
    ||||||||||||| | ||| |||| ||||||||| |||||||||| | ||||  ||||||  ||||||||||||||  ||||| |||| ||||    
T  28219915 agaagagtgccaattggaataaacagatcgaaaatgaatgagatcgacttcactgtcgagttgttgtgatatcagattgagaagatcctttgg 28219823  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #9
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 79 - 198
Target Start/End: Original strand, 7042272 - 7042391
Alignment:
Q  79 agtgggaattggaagggtaaaatgttatggtcatttggaatgggagaagagtgccaagttgaacaaaccgatcgaaaacgaatgagatcaagttcaacgt 178  Q
    |||||||| | |||||||||||||| ||| | |||||| | ||  |||| | |||| ||||||||||  ||| |||| ||||||||||||| ||||   |    
T  7042272 agtgggaacttgaagggtaaaatgtgatgatgatttgggacggaggaagcgcgccatgttgaacaaattgattgaaatcgaatgagatcaacttcattat 7042371  T
Q  179 cgaggcgttgtgatatcaga 198  Q
    |||  |||||||||||||||    
T  7042372 cgattcgttgtgatatcaga 7042391  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #10
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 92 - 198
Target Start/End: Original strand, 7047622 - 7047731
Alignment:
Q  92 agggtaaaatgttatggtcatttggaatgggagaagagtgccaagttgaacaaaccgatcgaaaacgaatgagatcaagt---tcaacgtcgaggcgttg 188  Q
    |||||||||||| ||| | |||||| | ||  |||||| |||| ||||||||||| ||||| || ||||||||||| |||   ||| ||||||  |||||    
T  7047622 agggtaaaatgtaatgatgatttgggacggaggaagagcgccatgttgaacaaactgatcggaagcgaatgagatcgagttcatcatcgtcgattcgttg 7047721  T
Q  189 tgatatcaga 198  Q
    ||||||||||    
T  7047722 tgatatcaga 7047731  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0038 (Bit Score: 42; Significance: 0.000000000000007; HSPs: 2)
Name: scaffold0038
Description:

Target: scaffold0038; HSP #1
Raw Score: 42; E-Value: 0.000000000000007
Query Start/End: Original strand, 111 - 220
Target Start/End: Original strand, 20446 - 20555
Alignment:
Q  111 atttggaatgggagaagagtgccaagttgaacaaaccgatcgaaaacgaatgagatcaagttcaacgtcgaggcgttgtgatatcagaaagagaatatcc 210  Q
    ||||||||| | ||||||||| ||| |  ||| ||| |||||||||||||||||||| ||||||  |||||| |||||||||||||||  ||||| ||||    
T  20446 atttggaatagaagaagagtgtcaattgaaacgaacagatcgaaaacgaatgagatcgagttcattgtcgagtcgttgtgatatcagattgagaagatcc 20545  T
Q  211 cttggcagct 220  Q
     |||| ||||    
T  20546 tttggaagct 20555  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0038; HSP #2
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 123 - 215
Target Start/End: Complemental strand, 20413 - 20321
Alignment:
Q  123 agaagagtgccaagttgaacaaaccgatcgaaaacgaatgagatcaagttcaacgtcgaggcgttgtgatatcagaaagagaatatcccttgg 215  Q
    ||||||||||||| | ||| |||| ||||||||| |||||||||| | ||||  ||||||  ||||||||||||||  ||||| |||| ||||    
T  20413 agaagagtgccaattggaataaacagatcgaaaatgaatgagatcgacttcactgtcgagttgttgtgatatcagattgagaagatcctttgg 20321  T

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Target: chr1 (Bit Score: 36; Significance: 0.00000000003; HSPs: 1)
Name: chr1
Description:

Target: chr1; HSP #1
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 123 - 198
Target Start/End: Original strand, 4440664 - 4440739
Alignment:
Q  123 agaagagtgccaagttgaacaaaccgatcgaaaacgaatgagatcaagttcaacgtcgaggcgttgtgatatcaga 198  Q
    ||||||| |||| || ||||||   ||||| |||||||||||||| |||||||||||||| ||||| |||||||||    
T  4440664 agaagagcgccatgtggaacaagttgatcggaaacgaatgagatcgagttcaacgtcgagtcgttgggatatcaga 4440739  T

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Target: scaffold0455 (Bit Score: 33; Significance: 0.000000002; HSPs: 1)
Name: scaffold0455
Description:

Target: scaffold0455; HSP #1
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 139 - 215
Target Start/End: Complemental strand, 10936 - 10860
Alignment:
Q  139 gaacaaaccgatcgaaaacgaatgagatcaagttcaacgtcgaggcgttgtgatatcagaaagagaatatcccttgg 215  Q
    |||||||| |||||| ||||||||||||||||||||  | |||| ||||| |||||||||  ||||| |||| ||||    
T  10936 gaacaaacagatcgataacgaatgagatcaagttcattgacgagtcgttgagatatcagattgagaagatcctttgg 10860  T

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Target: chr5 (Bit Score: 33; Significance: 0.000000002; HSPs: 1)
Name: chr5
Description:

Target: chr5; HSP #1
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 71 - 198
Target Start/End: Original strand, 18571856 - 18571986
Alignment:
Q  71 atttgagaagtgggaattggaagggtaaaatgtt---atggtcatttggaatgggagaagagtgccaagttgaacaaaccgatcgaaaacgaatgagatc 167  Q
    |||||||||||||||||| |||||||||||||||   ||| | |||||| ||||  |||||  ||||  | | ||||||| |||| || |||||||||||    
T  18571856 atttgagaagtgggaatttgaagggtaaaatgttagaatgatgatttgggatggaggaagaacgccatttgggacaaaccaatcggaagcgaatgagatc 18571955  T
Q  168 aagttcaacgtcgaggcgttgtgatatcaga 198  Q
     |||||||| || | |||||  |||||||||    
T  18571956 gagttcaacatcaatgcgttacgatatcaga 18571986  T

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