View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF14623_high_33 (Length: 235)
Name: NF14623_high_33
Description: NF14623
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF14623_high_33 |
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Alignment Details
Target: chr5 (Bit Score: 211; Significance: 1e-116; HSPs: 1)
Name: chr5
Description:
Target: chr5; HSP #1
Raw Score: 211; E-Value: 1e-116
Query Start/End: Original strand, 1 - 223
Target Start/End: Original strand, 23345854 - 23346076
Alignment:
| Q |
1 |
caagagagttccgaattgtgtcgccagccatgacgtcttacacttatttacagtaagtatttcacttagcattccaaattagacttgtttcaattttcta |
100 |
Q |
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| T |
23345854 |
caagagagttccgaattgtgtcgccagccatgacgtcttacacttatttacagtaagtatttcacttagcattccaaattagacttgtttcaattttcta |
23345953 |
T |
|
| Q |
101 |
tctaattcttgctatcgaattctgttctgagattctgttagccgtattagcgtttgattattaattctattctcgtactggtaaacttttacctactgat |
200 |
Q |
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|||||||||||||||||||||||| ||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
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| T |
23345954 |
tctaattcttgctatcgaattctggtcttagattctgttagccgtattagcgtttgattattaattctattctcgtactggtaaacttttacctactgat |
23346053 |
T |
|
| Q |
201 |
ctacgaccacgatgattgatgat |
223 |
Q |
| |
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|||||||||||||||| |||||| |
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| T |
23346054 |
ctacgaccacgatgatcgatgat |
23346076 |
T |
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