View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF14623_low_24 (Length: 271)
Name: NF14623_low_24
Description: NF14623
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF14623_low_24 |
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Alignment Details
Target: chr4 (Bit Score: 228; Significance: 1e-126; HSPs: 1)
Name: chr4
Description:
Target: chr4; HSP #1
Raw Score: 228; E-Value: 1e-126
Query Start/End: Original strand, 1 - 237
Target Start/End: Original strand, 52369408 - 52369646
Alignment:
| Q |
1 |
gtaacagacacccccataaatataatgtcccacaaatctgcacaaaattatatatttataaattagcagccatgccatatagtagttgaatatttattat |
100 |
Q |
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| T |
52369408 |
gtaacagacacccccataaatataatgtcccacaaatctgcacaaaattatatatttataaattagcagccatgccatatagtagttgaatatttattat |
52369507 |
T |
|
| Q |
101 |
attggtcaaaaccaaataattgcattcatttgttcaacaaattatgatatctgtcatcatcgtatagtaaagtttcatagttagcctccaataagtgtac |
200 |
Q |
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| T |
52369508 |
attggtcaaaaccaaataattgcattcatttgttcaacaaattatgatatctgtcatcatcgtatagtaaagtttcatagttagcctccaataagtgtac |
52369607 |
T |
|
| Q |
201 |
tcaattaactttg--aaactagttagttatgtatttagt |
237 |
Q |
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||||||||||||| |||||||||||||||||||||||| |
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| T |
52369608 |
tcaattaactttgaaaaactagttagttatgtatttagt |
52369646 |
T |
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