View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF14623_low_30 (Length: 251)
Name: NF14623_low_30
Description: NF14623
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF14623_low_30 |
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Alignment Details
Target: chr6 (Bit Score: 223; Significance: 1e-123; HSPs: 1)
Name: chr6
Description:
Target: chr6; HSP #1
Raw Score: 223; E-Value: 1e-123
Query Start/End: Original strand, 9 - 231
Target Start/End: Complemental strand, 29638391 - 29638169
Alignment:
| Q |
9 |
tcgaagaatattcttgaagatcatcaaaacagtgcttgaataatgatattttttagggtacttgaagattaaaattcaaaataactacaaatctaccata |
108 |
Q |
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| T |
29638391 |
tcgaagaatattcttgaagatcatcaaaacagtgcttgaataatgatattttttagggtacttgaagattaaaattcaaaataactacaaatctaccata |
29638292 |
T |
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| Q |
109 |
tcaaaagcatgcaagagaagctcaaagattagtcacaacaaatgtagttttgtctaagaatcgatcaaagttagagttctaaaataagaagaagttgcaa |
208 |
Q |
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|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
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| T |
29638291 |
tcaaaagcatgcaagagaagctcaaagattagtcacaacaaatgtagttttgtctaagaatcgatcaaagttagagttctaaaataagaagaagttgcaa |
29638192 |
T |
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| Q |
209 |
aagttttttctaagtacgtagta |
231 |
Q |
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||||||||||||||||||||||| |
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| T |
29638191 |
aagttttttctaagtacgtagta |
29638169 |
T |
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