View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF14623_low_8 (Length: 409)
Name: NF14623_low_8
Description: NF14623
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF14623_low_8 |
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Alignment Details
Target: chr8 (Bit Score: 249; Significance: 1e-138; HSPs: 1)
Name: chr8
Description:
Target: chr8; HSP #1
Raw Score: 249; E-Value: 1e-138
Query Start/End: Original strand, 135 - 391
Target Start/End: Original strand, 39209926 - 39210182
Alignment:
| Q |
135 |
ttgaagccaaattgcaaaaaagaaatgggtgaatgtttacaacatataatctagatctttaagggtgagtaatggaccagaccaccaacacgaatactga |
234 |
Q |
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| T |
39209926 |
ttgaagccaaattgcaaaaaagaaatgggtgaatgtttacaacatataatctagatctttaaggatgaataatggaccagaccaccaacacgaatactga |
39210025 |
T |
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| Q |
235 |
tccacatcctacaactcagtgcatcaaatcaaaaacctttacggtcatttctagccagcaatttgtagcgccaatcataaagagtgactcgaataaaaca |
334 |
Q |
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| T |
39210026 |
tccacatcctacaactcagtgcatcaaatcaaaaacctttacggtcatttctagccagcaatttgtagcgccaatcataaagagtgactcgaataaaaca |
39210125 |
T |
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| Q |
335 |
gtggtgcataaccaacatgcacattggagccactaataataaaacaaacaataatat |
391 |
Q |
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| T |
39210126 |
gtggtgcataaccaacatgcacattggagccactaataataaaacaaacaataatat |
39210182 |
T |
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