View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF14625_high_26 (Length: 283)
Name: NF14625_high_26
Description: NF14625
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF14625_high_26 |
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Alignment Details
Target: chr4 (Bit Score: 257; Significance: 1e-143; HSPs: 1)
Name: chr4
Description:
Target: chr4; HSP #1
Raw Score: 257; E-Value: 1e-143
Query Start/End: Original strand, 1 - 277
Target Start/End: Original strand, 9491734 - 9492010
Alignment:
| Q |
1 |
accctaaccctaaccctaaccctagatcctccatcctcaaatggttctcttccctctcagttcaccaccgtctctcatatctcacaatcctcgatcacaa |
100 |
Q |
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||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||| |
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| T |
9491734 |
accctaaccctaaccctaaccctagatcctccatcctcaaatggttctcttccctctcaattcaccaccgtctctcatatctcacaatcctcgatcacaa |
9491833 |
T |
|
| Q |
101 |
tttcatcctcatccttcttcaaatgcttaacaaactccaatccaaccgtcacacttccttcatcctcctccctgatctcccctctagggagccacctttc |
200 |
Q |
| |
|
|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||| ||||||||| |
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| T |
9491834 |
tttcatcctcatccttcttcaaatgcttaacaaactccaatccaaccgtcacacttccttcatcctcctcgctgatctcccctctagggacccacctttc |
9491933 |
T |
|
| Q |
201 |
ctccccaccttgtgcttcaagaaatctcacggtcttttatctcgaatcgcagataaagatacctcttgtcagttcat |
277 |
Q |
| |
|
|||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||| ||||||||||||| |
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| T |
9491934 |
ctccccaccttgtgcttcaagaaatctcacggtcttttatctcgaatcgccgataaagataccgcttgtcagttcat |
9492010 |
T |
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