View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF14625_high_39 (Length: 230)
Name: NF14625_high_39
Description: NF14625
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF14625_high_39 |
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| [»] chr7 (1 HSPs) |
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Alignment Details
Target: chr7 (Bit Score: 204; Significance: 1e-111; HSPs: 1)
Name: chr7
Description:
Target: chr7; HSP #1
Raw Score: 204; E-Value: 1e-111
Query Start/End: Original strand, 19 - 230
Target Start/End: Original strand, 30892880 - 30893091
Alignment:
| Q |
19 |
atggagggcctgagacatcaaggtttatcaatgaacaccttgttcaccatctaaagagtaagtgacatcaagaatgagttcttaaagctgtttttcctct |
118 |
Q |
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| T |
30892880 |
atggagggcctgagacatcaaggtttatcaatgaacaccttgttcaccatctaaagagtaagtgacatcaagaatgagttcttaaagctgtttttcctct |
30892979 |
T |
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| Q |
119 |
tcattcgaatagattgtgcctgttactttgcttgttttccatataccagtcgcttctaattccaagtggttgtagtagttataatttgcttttaacttcg |
218 |
Q |
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| T |
30892980 |
tcattcgaatagattgtgcctgttactttgcttgtttttcatataccagtagcttctaattccaagtggttgtagtagttataatttgcttttaacttcg |
30893079 |
T |
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| Q |
219 |
ataaaatcatac |
230 |
Q |
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| T |
30893080 |
ataaaatcatac |
30893091 |
T |
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