View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF14625_low_15 (Length: 385)
Name: NF14625_low_15
Description: NF14625
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF14625_low_15 |
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Alignment Details
Target: chr7 (Bit Score: 361; Significance: 0; HSPs: 1)
Name: chr7
Description:
Target: chr7; HSP #1
Raw Score: 361; E-Value: 0
Query Start/End: Original strand, 1 - 381
Target Start/End: Complemental strand, 32430509 - 32430130
Alignment:
| Q |
1 |
atcgaatgcataaccgttaaatataattgggtaagccactttggacttgttcgtgtgtaaaatattataccaaataaataaacaagtttattggcctcat |
100 |
Q |
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| T |
32430509 |
atcgaatgcataaccgttaaatataattgtgtaagccactttggacttgtttgtgtgtaaaatattataccaaataaataaacaagcttattggcctcat |
32430410 |
T |
|
| Q |
101 |
gtttcttctttttgtgtgaagccatcttcctcatgagcagctgcaaagaaaatggaggaattgacttgtggaaggtatttgccaagtatgatagtgtggg |
200 |
Q |
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|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
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| T |
32430409 |
gtttcttctttttgtgtgaagccatcttcctcatgagcagctgcaaagaaaatggaggaattgacttgtggaaggtatttgccaagtatgatagtgtggg |
32430310 |
T |
|
| Q |
201 |
ggaagtgtgtaaagagtaatcaaataaatgttttttcttgtaaaataacactagctctaaattttactacacaatttttagcatgttgcactttaaatta |
300 |
Q |
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|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
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| T |
32430309 |
ggaagtgtgtaaagagtaatcaaataaatgttttttcttgtaaaataacactagctctaaattttactacacaatttttagcatgttgcactttaaatta |
32430210 |
T |
|
| Q |
301 |
tattcaaactaacttaaaatttaattcaaagctaattcttaaatctgaatttatcctcattacctagtcattaaggttttg |
381 |
Q |
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||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
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| T |
32430209 |
tattcaaactaactt-aaatttaattcaaagctaattcttaaatctgaatttatcctcattacctagtcattaaggttttg |
32430130 |
T |
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