View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF14625_low_25 (Length: 311)
Name: NF14625_low_25
Description: NF14625
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF14625_low_25 |
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Alignment Details
Target: chr1 (Bit Score: 284; Significance: 1e-159; HSPs: 1)
Name: chr1
Description:
Target: chr1; HSP #1
Raw Score: 284; E-Value: 1e-159
Query Start/End: Original strand, 19 - 302
Target Start/End: Original strand, 44518413 - 44518696
Alignment:
| Q |
19 |
agggaatgcatgaatgagatgtgtttgaagtacagcccctactaattaaccaagttagttgaattaaaactacttgctcaagttggcatgaaattccact |
118 |
Q |
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| T |
44518413 |
agggaatgcatgaatgagatgtgtttgaagtacagcccctactaattaaccaagttagttgaattaaaactacttgctcaagttggcatgaaattccact |
44518512 |
T |
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| Q |
119 |
acatatatattagtgactgctcaagatacacatcatcaccacaattatataccatagtttcatcatgtaaatgggtcctagctggccatgttacccaccc |
218 |
Q |
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| T |
44518513 |
acatatatattagtgactgctcaagatacacatcatcaccacaattatataccatagtttcatcatgtaaatgggtcctagctggccatgttacccaccc |
44518612 |
T |
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| Q |
219 |
atggtttagcttcaaatagtaaacaaaccatacttacatggtcccttcaagctttcaattataccaccacatattgacactgcc |
302 |
Q |
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|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
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| T |
44518613 |
atggtttagcttcaaatagtaaacaaaccatacttacatggtcccttcaagctttcaattataccaccacatattgacactgcc |
44518696 |
T |
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