View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF14625_low_40 (Length: 239)
Name: NF14625_low_40
Description: NF14625
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF14625_low_40 |
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| [»] chr5 (1 HSPs) |
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Alignment Details
Target: chr5 (Bit Score: 209; Significance: 1e-114; HSPs: 1)
Name: chr5
Description:
Target: chr5; HSP #1
Raw Score: 209; E-Value: 1e-114
Query Start/End: Original strand, 19 - 239
Target Start/End: Original strand, 14961021 - 14961241
Alignment:
| Q |
19 |
tttatacagattgcttccactagcatagtttgtttcttgtcgccaccttgcttatatgggccaagctgcttatttgttgatgaaccctacttcttattca |
118 |
Q |
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| T |
14961021 |
tttatacagattgcttacactagcatagtttgtttcttgtcgcctccttgcttatatgggccaagctgcttatttgttgatgaaccctacttcttattca |
14961120 |
T |
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| Q |
119 |
ttgattctgttccaggtgatatatttgctgatattatgtttgtgattgtgcatattagtcactgtcctaaaaaatttaattgaatgttatcaaactagat |
218 |
Q |
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| T |
14961121 |
ttgattctgttccaggtgatatatttgctgatattatgtttgtgactgtgcatattagtcactgtcctaaaaaatttaattgaatgttatcaaactagat |
14961220 |
T |
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| Q |
219 |
acgagattgaatcggtgagac |
239 |
Q |
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| T |
14961221 |
acgagattgaatcggtgagac |
14961241 |
T |
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