View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
|
Alignment Overview
Query: NF14627_low_16 (Length: 233)
Name: NF14627_low_16
Description: NF14627
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF14627_low_16 |
 | |
|
| [»] scaffold0288 (1 HSPs) |
| | |
|
| [»] scaffold0477 (1 HSPs) |
| | |
|
| [»] scaffold0475 (1 HSPs) |
| | |
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Alignment Details
Target: chr6 (Bit Score: 191; Significance: 1e-104; HSPs: 30)
Name: chr6
Description:
Target: chr6; HSP #1
Raw Score: 191; E-Value: 1e-104
Query Start/End: Original strand, 1 - 224
Target Start/End: Complemental strand, 4602059 - 4601836
Alignment:
| Q |
1 |
gccgatgttgtgttggccnnnnnnngccgatcagccaacaaactgtagatttatttgtaatgaatgggagattggtatggaaatcaatacaaatgtgaag |
100 |
Q |
| |
|
|||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||| |
|
|
| T |
4602059 |
gccgatgttgtgttggcctttttttgccgatcagccaacaaactgtagatttatttgtaatgaatgggagattggtatggaaatcgatacaaatgtgaag |
4601960 |
T |
|
| Q |
101 |
agagaggagttggcgaagctgatcaatgaagtgatagccggagataaaggaaagaagatgaggcaaaaggccatggagttgaagaagatggcaaaggaga |
200 |
Q |
| |
|
|||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||| |
|
|
| T |
4601959 |
agagaggagttggcgaagctgatcaatgaagtgatagccggagataaaggcaagaagatgaggcaaaaggccatggagttgaagaagatggcaaaggaga |
4601860 |
T |
|
| Q |
201 |
gcactagattaggtggttgttcat |
224 |
Q |
| |
|
|||||||| ||||||||||||||| |
|
|
| T |
4601859 |
gcactagactaggtggttgttcat |
4601836 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr6; HSP #2
Raw Score: 151; E-Value: 5e-80
Query Start/End: Original strand, 26 - 224
Target Start/End: Complemental strand, 4617267 - 4617069
Alignment:
| Q |
26 |
gccgatcagccaacaaactgtagatttatttgtaatgaatgggagattggtatggaaatcaatacaaatgtgaagagagaggagttggcgaagctgatca |
125 |
Q |
| |
|
||||| ||||||||| |||||||||||||||||||||||||||||||||||||||||||| |||| ||||||||||||||||||||||| |||||||||| |
|
|
| T |
4617267 |
gccgaccagccaacagactgtagatttatttgtaatgaatgggagattggtatggaaatcgatacgaatgtgaagagagaggagttggcaaagctgatca |
4617168 |
T |
|
| Q |
126 |
atgaagtgatagccggagataaaggaaagaagatgaggcaaaaggccatggagttgaagaagatggcaaaggagagcactagattaggtggttgttcat |
224 |
Q |
| |
|
||||||||||||||||||||||||||||||| |||| |||||||||||||||||||||||||| |||| |||||| ||||||| |||||||||||||| |
|
|
| T |
4617167 |
atgaagtgatagccggagataaaggaaagaaaatgaagcaaaaggccatggagttgaagaagaaggcagaggagaacactagaccaggtggttgttcat |
4617069 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr6; HSP #3
Raw Score: 96; E-Value: 3e-47
Query Start/End: Original strand, 29 - 200
Target Start/End: Original strand, 4260044 - 4260215
Alignment:
| Q |
29 |
gatcagccaacaaactgtagatttatttgtaatgaatgggagattggtatggaaatcaatacaaatgtgaagagagaggagttggcgaagctgatcaatg |
128 |
Q |
| |
|
|||||||||||||||||||||||||||||||| |||||||||||||| || ||||| ||||| |||||||| ||||| ||| |||||||||||||||||| |
|
|
| T |
4260044 |
gatcagccaacaaactgtagatttatttgtaacgaatgggagattggaattgaaattaatactaatgtgaaaagagatgaggtggcgaagctgatcaatg |
4260143 |
T |
|
| Q |
129 |
aagtgatagccggagataaaggaaagaagatgaggcaaaaggccatggagttgaagaagatggcaaaggaga |
200 |
Q |
| |
|
|| | || | ||||| |||||||||||||||||||||||| |||||||||||||| || |||| |||||| |
|
|
| T |
4260144 |
aaattatgtcaggagaagaaggaaagaagatgaggcaaaaggtcatggagttgaagaggaaggcagaggaga |
4260215 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr6; HSP #4
Raw Score: 92; E-Value: 8e-45
Query Start/End: Original strand, 29 - 200
Target Start/End: Complemental strand, 4626193 - 4626022
Alignment:
| Q |
29 |
gatcagccaacaaactgtagatttatttgtaatgaatgggagattggtatggaaatcaatacaaatgtgaagagagaggagttggcgaagctgatcaatg |
128 |
Q |
| |
|
|||||||||||||| ||||||| |||||| ||||||||||||||||| ||||||||| || | ||||||||||| |||| | | | ||| |||||||||| |
|
|
| T |
4626193 |
gatcagccaacaaattgtagatatatttgcaatgaatgggagattggaatggaaatcgatgctaatgtgaagagggagggggtagagaaactgatcaatg |
4626094 |
T |
|
| Q |
129 |
aagtgatagccggagataaaggaaagaagatgaggcaaaaggccatggagttgaagaagatggcaaaggaga |
200 |
Q |
| |
|
| |||| || |||||||| |||||||||||||||||||||||||||||||||||||||| |||| |||||| |
|
|
| T |
4626093 |
cattgatggcaggagataacggaaagaagatgaggcaaaaggccatggagttgaagaagaaggcagaggaga |
4626022 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr6; HSP #5
Raw Score: 90; E-Value: 1e-43
Query Start/End: Original strand, 35 - 188
Target Start/End: Original strand, 4256508 - 4256661
Alignment:
| Q |
35 |
ccaacaaactgtagatttatttgtaatgaatgggagattggtatggaaatcaatacaaatgtgaagagagaggagttggcgaagctgatcaatgaagtga |
134 |
Q |
| |
|
||||||||||||||||||||||||| |||||||||||||| || ||||||||||| |||||||||||||| ||| ||| ||| |||||||||||| ||| |
|
|
| T |
4256508 |
ccaacaaactgtagatttatttgtagcgaatgggagattggaattgaaatcaatactaatgtgaagagagatgaggtggagaatctgatcaatgaattga |
4256607 |
T |
|
| Q |
135 |
tagccggagataaaggaaagaagatgaggcaaaaggccatggagttgaagaaga |
188 |
Q |
| |
|
| | ||||| ||||||||||||||||||||||||| |||||| |||||||||| |
|
|
| T |
4256608 |
tgtcgggagaaaaaggaaagaagatgaggcaaaaggtcatggaattgaagaaga |
4256661 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr6; HSP #6
Raw Score: 89; E-Value: 5e-43
Query Start/End: Original strand, 32 - 224
Target Start/End: Complemental strand, 4516560 - 4516368
Alignment:
| Q |
32 |
cagccaacaaactgtagatttatttgtaatgaatgggagattggtatggaaatcaatacaaatgtgaagagagaggagttggcgaagctgatcaatgaag |
131 |
Q |
| |
|
||||||||||| || |||| |||||| ||||||||||||||||| ||||| |||| |||||||||||||||||| ||| |||||||||||||||| |
|
|
| T |
4516560 |
cagccaacaaattgcagatatatttgcaatgaatgggagattggagcagaaattgataccaatgtgaagagagaggaggtggagaagctgatcaatgaat |
4516461 |
T |
|
| Q |
132 |
tgatagccggagataaaggaaagaagatgaggcaaaaggccatggagttgaagaagatggcaaaggagagcactagattaggtggttgttcat |
224 |
Q |
| |
|
| || | |||||||||||||||||||||||||||||||||||||| |||||||||| |||| ||||| ||| ||| |||||||||||||| |
|
|
| T |
4516460 |
taatggtgggagataaaggaaagaagatgaggcaaaaggccatggaattgaagaagaaggcagaggaggacacaagaccaggtggttgttcat |
4516368 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr6; HSP #7
Raw Score: 89; E-Value: 5e-43
Query Start/End: Original strand, 29 - 193
Target Start/End: Complemental strand, 4622384 - 4622220
Alignment:
| Q |
29 |
gatcagccaacaaactgtagatttatttgtaatgaatgggagattggtatggaaatcaatacaaatgtgaagagagaggagttggcgaagctgatcaatg |
128 |
Q |
| |
|
|||||||||||||||||||||| ||| || ||| |||||||||||| || ||||||||||| |||||||| ||||||||| || |||| |||||||||| |
|
|
| T |
4622384 |
gatcagccaacaaactgtagatatatctgcaattcatgggagattggaatcgaaatcaatactaatgtgaaaagagaggaggtgtcgaatctgatcaatg |
4622285 |
T |
|
| Q |
129 |
aagtgatagccggagataaaggaaagaagatgaggcaaaaggccatggagttgaagaagatggca |
193 |
Q |
| |
|
|| |||| | ||||||||||||||||||||||| ||||||||||||||||||||| ||| |||| |
|
|
| T |
4622284 |
aattgatgtcgggagataaaggaaagaagatgagacaaaaggccatggagttgaaggagaaggca |
4622220 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr6; HSP #8
Raw Score: 84; E-Value: 5e-40
Query Start/End: Original strand, 29 - 200
Target Start/End: Complemental strand, 4592473 - 4592302
Alignment:
| Q |
29 |
gatcagccaacaaactgtagatttatttgtaatgaatgggagattggtatggaaatcaatacaaatgtgaagagagaggagttggcgaagctgatcaatg |
128 |
Q |
| |
|
||||||||||||||||||||| |||||| ||||||||||||||||| |||||||| |||| ||||| |||||||||||| ||| ||| || ||||||| |
|
|
| T |
4592473 |
gatcagccaacaaactgtagacttatttacaatgaatgggagattgggatggaaattgatacgaatgtaaagagagaggaggtggagaaacttatcaatg |
4592374 |
T |
|
| Q |
129 |
aagtgatagccggagataaaggaaagaagatgaggcaaaaggccatggagttgaagaagatggcaaaggaga |
200 |
Q |
| |
|
|| |||| | ||||| |||||||||||||||||| ||||||| || ||||||||||||| |||| |||||| |
|
|
| T |
4592373 |
aattgatggtgggagagaaaggaaagaagatgaggaaaaaggcaatcgagttgaagaagaaggcagaggaga |
4592302 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr6; HSP #9
Raw Score: 80; E-Value: 1e-37
Query Start/End: Original strand, 29 - 188
Target Start/End: Complemental strand, 4574550 - 4574391
Alignment:
| Q |
29 |
gatcagccaacaaactgtagatttatttgtaatgaatgggagattggtatggaaatcaatacaaatgtgaagagagaggagttggcgaagctgatcaatg |
128 |
Q |
| |
|
||||||||| ||||||| |||| |||||| ||||||||||||||||| | ||||||| |||| ||||| ||||| |||||| ||| ||| ||| |||||| |
|
|
| T |
4574550 |
gatcagccagcaaactgcagatatatttgcaatgaatgggagattggaaaggaaatcgatactaatgtaaagagggaggaggtggagaaactggtcaatg |
4574451 |
T |
|
| Q |
129 |
aagtgatagccggagataaaggaaagaagatgaggcaaaaggccatggagttgaagaaga |
188 |
Q |
| |
|
|| |||| ||||||||||||||||||||||||||||||| ||||| ||| ||||||||| |
|
|
| T |
4574450 |
aattgatgtccggagataaaggaaagaagatgaggcaaaaagccattgagctgaagaaga |
4574391 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr6; HSP #10
Raw Score: 80; E-Value: 1e-37
Query Start/End: Original strand, 29 - 188
Target Start/End: Complemental strand, 4585878 - 4585719
Alignment:
| Q |
29 |
gatcagccaacaaactgtagatttatttgtaatgaatgggagattggtatggaaatcaatacaaatgtgaagagagaggagttggcgaagctgatcaatg |
128 |
Q |
| |
|
||||||||||||||||||||| ||||||| ||||||||||||||||| |||||| | | || |||||||||||||||||| ||| |||| || |||||| |
|
|
| T |
4585878 |
gatcagccaacaaactgtagaattatttgcaatgaatgggagattgggatggaagttgacaccaatgtgaagagagaggaggtggagaagttggtcaatg |
4585779 |
T |
|
| Q |
129 |
aagtgatagccggagataaaggaaagaagatgaggcaaaaggccatggagttgaagaaga |
188 |
Q |
| |
|
|| |||| | ||||| || ||||||||||||||||||||||| || ||||||||||||| |
|
|
| T |
4585778 |
aattgatggtgggagagaatggaaagaagatgaggcaaaaggcaatcgagttgaagaaga |
4585719 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr6; HSP #11
Raw Score: 76; E-Value: 3e-35
Query Start/End: Original strand, 29 - 188
Target Start/End: Complemental strand, 4563953 - 4563794
Alignment:
| Q |
29 |
gatcagccaacaaactgtagatttatttgtaatgaatgggagattggtatggaaatcaatacaaatgtgaagagagaggagttggcgaagctgatcaatg |
128 |
Q |
| |
|
||||||||||||||||||||| |||||| ||||||||||||||||| ||||||||| |||| ||||| |||||||| ||| ||| ||| || |||||| |
|
|
| T |
4563953 |
gatcagccaacaaactgtagacttatttacaatgaatgggagattgggatggaaatcgatacgaatgtaaagagagaagaggtggagaaacttgtcaatg |
4563854 |
T |
|
| Q |
129 |
aagtgatagccggagataaaggaaagaagatgaggcaaaaggccatggagttgaagaaga |
188 |
Q |
| |
|
|| |||| | ||||| ||||||||||||||| |||||||||| || ||||||||||||| |
|
|
| T |
4563853 |
aattgatgtcaggagagaaaggaaagaagatgcggcaaaaggcaattgagttgaagaaga |
4563794 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr6; HSP #12
Raw Score: 75; E-Value: 1e-34
Query Start/End: Original strand, 26 - 224
Target Start/End: Complemental strand, 4480938 - 4480740
Alignment:
| Q |
26 |
gccgatcagccaacaaactgtagatttatttgtaatgaatgggagattggtatggaaatcaatacaaatgtgaagagagaggagttggcgaagctgatca |
125 |
Q |
| |
|
|||||||||||| | ||| ||||| ||||||| ||||||||||||||||| | |||||| |||| |||||||||||||| || ||| || | | |||| |
|
|
| T |
4480938 |
gccgatcagccacctaaccgtagaattatttgcaatgaatgggagattggactcgaaatcgataccaatgtgaagagagaagatgtggagaggttaatca |
4480839 |
T |
|
| Q |
126 |
atgaagtgatagccggagataaaggaaagaagatgaggcaaaaggccatggagttgaagaagatggcaaaggagagcactagattaggtggttgttcat |
224 |
Q |
| |
|
||||| || | | ||||| |||||||||||||||| ||||||||||||||||||||||||||||||| ||||| ||| ||| ||||||||||||| |
|
|
| T |
4480838 |
atgaattgttggtgggagagaaaggaaagaagatgaagcaaaaggccatggagttgaagaagatggcagaggaggacacaagacctggtggttgttcat |
4480740 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr6; HSP #13
Raw Score: 70; E-Value: 1e-31
Query Start/End: Original strand, 29 - 186
Target Start/End: Complemental strand, 4560748 - 4560591
Alignment:
| Q |
29 |
gatcagccaacaaactgtagatttatttgtaatgaatgggagattggtatggaaatcaatacaaatgtgaagagagaggagttggcgaagctgatcaatg |
128 |
Q |
| |
|
||||||||| ||||||| |||| |||||| ||||||||| ||||||| | ||||| |||||||||| ||||| ||||| ||| ||| ||| |||||| |
|
|
| T |
4560748 |
gatcagccagcaaactgaagatatatttgcaatgaatggaagattggaaacgaaattgatacaaatgtaaagagggaggacgtggagaaactggtcaatg |
4560649 |
T |
|
| Q |
129 |
aagtgatagccggagataaaggaaagaagatgaggcaaaaggccatggagttgaagaa |
186 |
Q |
| |
|
|| |||| || |||||||||||||||||||||||||||||||||||||| ||||||| |
|
|
| T |
4560648 |
aattgatgtcctgagataaaggaaagaagatgaggcaaaaggccatggagctgaagaa |
4560591 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr6; HSP #14
Raw Score: 68; E-Value: 2e-30
Query Start/End: Original strand, 29 - 224
Target Start/End: Original strand, 4613608 - 4613803
Alignment:
| Q |
29 |
gatcagccaacaaactgtagatttatttgtaatgaatgggagattggtatggaaatcaatacaaatgtgaagagagaggagttggcgaagctgatcaatg |
128 |
Q |
| |
|
||||||||| ||||||| |||| ||| || ||||||||||| ||||| |||||||| | || |||||||||||||| ||| | | ||||||| |||||| |
|
|
| T |
4613608 |
gatcagccagcaaactgcagatatatatgcaatgaatgggaaattgggatggaaattgacaccaatgtgaagagagatgaggtagagaagctggtcaatg |
4613707 |
T |
|
| Q |
129 |
aagtgatagccggagataaaggaaagaagatgaggcaaaaggccatggagttgaagaagatggcaaaggagagcactagattaggtggttgttcat |
224 |
Q |
| |
|
|| |||| | ||||| ||||||||||| |||||||||||||| || ||||||||||||| |||| ||||| ||| ||| ||| |||||||||| |
|
|
| T |
4613708 |
aattgatggtgggagagaaaggaaagaaaatgaggcaaaaggcaattgagttgaagaagaaggcagaggaggacacgagaccaggaggttgttcat |
4613803 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr6; HSP #15
Raw Score: 65; E-Value: 1e-28
Query Start/End: Original strand, 29 - 193
Target Start/End: Original strand, 4515011 - 4515175
Alignment:
| Q |
29 |
gatcagccaacaaactgtagatttatttgtaatgaatgggagattggtatggaaatcaatacaaatgtgaagagagaggagttggcgaagctgatcaatg |
128 |
Q |
| |
|
||||| ||||||||||||||||||||||| ||||||||||||||||| || |||||| ||| |||||||||||||||||| | | ||||| |||||| |
|
|
| T |
4515011 |
gatcaaccaacaaactgtagatttatttgcaatgaatgggagattgggatcgaaatcgatatgaatgtgaagagagaggaggttgaaaagcttgtcaatg |
4515110 |
T |
|
| Q |
129 |
aagtgatagccggagataaaggaaagaagatgaggcaaaaggccatggagttgaagaagatggca |
193 |
Q |
| |
|
|| |||| | ||||| |||||||| || |||||| |||||| ||||||||||| |||| |||| |
|
|
| T |
4515111 |
aattgatggtgggagagaaaggaaataaaatgaggaaaaaggttatggagttgaaaaagaaggca |
4515175 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr6; HSP #16
Raw Score: 65; E-Value: 1e-28
Query Start/End: Original strand, 32 - 188
Target Start/End: Complemental strand, 4568295 - 4568139
Alignment:
| Q |
32 |
cagccaacaaactgtagatttatttgtaatgaatgggagattggtatggaaatcaatacaaatgtgaagagagaggagttggcgaagctgatcaatgaag |
131 |
Q |
| |
|
||||||||| |||| |||| |||||||||| | | |||||| || || ||||| ||||||||||||||||||||||| ||| ||||||||| |||||| |
|
|
| T |
4568295 |
cagccaacatactgcagatatatttgtaataagttggagatcggaatcgaaattgatacaaatgtgaagagagaggaggtggagaagctgatgaatgaat |
4568196 |
T |
|
| Q |
132 |
tgatagccggagataaaggaaagaagatgaggcaaaaggccatggagttgaagaaga |
188 |
Q |
| |
|
| || | ||| | |||||||| |||||||||||||||||| ||||||||||||||| |
|
|
| T |
4568195 |
taatggtgggacagaaaggaaaaaagatgaggcaaaaggccgtggagttgaagaaga |
4568139 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr6; HSP #17
Raw Score: 64; E-Value: 4e-28
Query Start/End: Original strand, 45 - 224
Target Start/End: Complemental strand, 3171967 - 3171788
Alignment:
| Q |
45 |
gtagatttatttgtaatgaatgggagattggtatggaaatcaatacaaatgtgaagagagaggagttggcgaagctgatcaatgaagtgatagccggaga |
144 |
Q |
| |
|
||||| ||||||| | |||||| ||||||| |||||||| |||| ||||| ||||||| |||| | | ||| |||||||| ||| |||| | ||||| |
|
|
| T |
3171967 |
gtagaattatttgccaagaatggaagattgggatggaaattgataccaatgtaaagagaggggaggtagagaaactgatcaacgaattgatggtgggaga |
3171868 |
T |
|
| Q |
145 |
taaaggaaagaagatgaggcaaaaggccatggagttgaagaagatggcaaaggagagcactagattaggtggttgttcat |
224 |
Q |
| |
|
|||||||||||||||||||||| |||||||||||||||||||| |||| ||||| || ||||| ||||||||||||| |
|
|
| T |
3171867 |
gaaaggaaagaagatgaggcaaagggccatggagttgaagaagaaggcagaggaggatacaagatttggtggttgttcat |
3171788 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr6; HSP #18
Raw Score: 61; E-Value: 2e-26
Query Start/End: Original strand, 29 - 185
Target Start/End: Original strand, 4267056 - 4267212
Alignment:
| Q |
29 |
gatcagccaacaaactgtagatttatttgtaatgaatgggagattggtatggaaatcaatacaaatgtgaagagagaggagttggcgaagctgatcaatg |
128 |
Q |
| |
|
||||||||||||||||||||||||||||| |||||||||||||||| | |||||||||||||||||||||||||| || | | |||| | |||||| |
|
|
| T |
4267056 |
gatcagccaacaaactgtagatttatttgctatgaatgggagattggactcgaaatcaatacaaatgtgaagagagatgacgtcgagaagttagtcaatg |
4267155 |
T |
|
| Q |
129 |
aagtgatagccggagataaaggaaagaagatgaggcaaaaggccatggagttgaaga |
185 |
Q |
| |
|
|| |||| | ||||| |||||||| | ||||| |||||| | | |||||||||||| |
|
|
| T |
4267156 |
aattgatggtgggagagaaaggaaatatgatgaagcaaaatgtcttggagttgaaga |
4267212 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr6; HSP #19
Raw Score: 60; E-Value: 1e-25
Query Start/End: Original strand, 29 - 188
Target Start/End: Complemental strand, 4470045 - 4469886
Alignment:
| Q |
29 |
gatcagccaacaaactgtagatttatttgtaatgaatgggagattggtatggaaatcaatacaaatgtgaagagagaggagttggcgaagctgatcaatg |
128 |
Q |
| |
|
||||||| | |||| |||||||||||||| ||||||||||||||||| | |||||| ||| | ||||||||||||| ||| ||| |||||| |||||| |
|
|
| T |
4470045 |
gatcagctagcaaattgtagatttatttgcaatgaatgggagattggacttgaaatcgataaagatgtgaagagagatgaggtggagaagctagtcaatg |
4469946 |
T |
|
| Q |
129 |
aagtgatagccggagataaaggaaagaagatgaggcaaaaggccatggagttgaagaaga |
188 |
Q |
| |
|
|| |||| | ||||| || ||||||||||||||| ||||| ||||||||| ||||||| |
|
|
| T |
4469945 |
aattgatggttggagagaatggaaagaagatgagggaaaagatcatggagttcaagaaga |
4469886 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr6; HSP #20
Raw Score: 59; E-Value: 4e-25
Query Start/End: Original strand, 29 - 199
Target Start/End: Complemental strand, 4506099 - 4505929
Alignment:
| Q |
29 |
gatcagccaacaaactgtagatttatttgtaatgaatgggagattggtatggaaatcaatacaaatgtgaagagagaggagttggcgaagctgatcaatg |
128 |
Q |
| |
|
||||| ||||||||||||||||||||||| ||||||| ||||||||| || ||||| |||| |||||||| ||||| | | | ||||||| || ||| |
|
|
| T |
4506099 |
gatcaaccaacaaactgtagatttatttgcaatgaattggagattggaatcgaaattgatactaatgtgaatagagaaaatgtagagaagctggtcgatg |
4506000 |
T |
|
| Q |
129 |
aagtgatagccggagataaaggaaagaagatgaggcaaaaggccatggagttgaagaagatggcaaaggag |
199 |
Q |
| |
|
|| | || | ||||| |||||||| ||||||||| |||||| |||||||||||| |||| |||||||||| |
|
|
| T |
4505999 |
aaattatggttggagagaaaggaaacaagatgaggaaaaaggtcatggagttgaaaaagagggcaaaggag |
4505929 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr6; HSP #21
Raw Score: 57; E-Value: 6e-24
Query Start/End: Original strand, 45 - 193
Target Start/End: Original strand, 4490261 - 4490409
Alignment:
| Q |
45 |
gtagatttatttgtaatgaatgggagattggtatggaaatcaatacaaatgtgaagagagaggagttggcgaagctgatcaatgaagtgatagccggaga |
144 |
Q |
| |
|
||||| ||||||| | |||||||||||||| ||| |||| |||| ||||| |||||||| ||| | | ||| |||||||||||| |||| | ||||| |
|
|
| T |
4490261 |
gtagaattatttgcgaagaatgggagattgggatgaaaattgataccaatgtaaagagagaagaggtagagaaactgatcaatgaattgatggtgggaga |
4490360 |
T |
|
| Q |
145 |
taaaggaaagaagatgaggcaaaaggccatggagttgaagaagatggca |
193 |
Q |
| |
|
|||||||||||||||||||||||||| | |||||||||||||| |||| |
|
|
| T |
4490361 |
gaaaggaaagaagatgaggcaaaaggcgacggagttgaagaagaaggca |
4490409 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr6; HSP #22
Raw Score: 53; E-Value: 1e-21
Query Start/End: Original strand, 64 - 184
Target Start/End: Original strand, 4299671 - 4299791
Alignment:
| Q |
64 |
atgggagattggtatggaaatcaatacaaatgtgaagagagaggagttggcgaagctgatcaatgaagtgatagccggagataaaggaaagaagatgagg |
163 |
Q |
| |
|
|||||||||||| || |||||| |||||||||||| |||||||||| ||| ||||||||||||||| |||| | ||||| |||||| | |||||||| |
|
|
| T |
4299671 |
atgggagattggaatcgaaatcgatacaaatgtgaggagagaggaggtggaaaagctgatcaatgaattgatggtgggagagaaaggagataagatgaga |
4299770 |
T |
|
| Q |
164 |
caaaaggccatggagttgaag |
184 |
Q |
| |
|
|||||||| | |||||||||| |
|
|
| T |
4299771 |
caaaaggcaagggagttgaag |
4299791 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr6; HSP #23
Raw Score: 53; E-Value: 1e-21
Query Start/End: Original strand, 140 - 224
Target Start/End: Original strand, 4504398 - 4504482
Alignment:
| Q |
140 |
ggagataaaggaaagaagatgaggcaaaaggccatggagttgaagaagatggcaaaggagagcactagattaggtggttgttcat |
224 |
Q |
| |
|
||||| ||||||||||||||||||||||||||||||||||||||||||| |||| ||||| ||| ||| | ||||||||||||| |
|
|
| T |
4504398 |
ggagagaaaggaaagaagatgaggcaaaaggccatggagttgaagaagaaggcagaggaggacacaagacttggtggttgttcat |
4504482 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr6; HSP #24
Raw Score: 53; E-Value: 1e-21
Query Start/End: Original strand, 41 - 169
Target Start/End: Complemental strand, 4598401 - 4598273
Alignment:
| Q |
41 |
aactgtagatttatttgtaatgaatgggagattggtatggaaatcaatacaaatgtgaagagagaggagttggcgaagctgatcaatgaagtgatagccg |
140 |
Q |
| |
|
||||| |||| |||||| ||||||||||||||||| || |||| | || |||||||||||||||||| ||| ||||||| |||| ||| |||| | | |
|
|
| T |
4598401 |
aactgcagatatatttgcaatgaatgggagattggaatcaaaattgaaactaatgtgaagagagaggaggtggagaagctggtcaacgaattgatgtcgg |
4598302 |
T |
|
| Q |
141 |
gagataaaggaaagaagatgaggcaaaag |
169 |
Q |
| |
|
|||||||||||||||| |||||||||||| |
|
|
| T |
4598301 |
gagataaaggaaagaaaatgaggcaaaag |
4598273 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr6; HSP #25
Raw Score: 52; E-Value: 6e-21
Query Start/End: Original strand, 29 - 188
Target Start/End: Complemental strand, 4461365 - 4461206
Alignment:
| Q |
29 |
gatcagccaacaaactgtagatttatttgtaatgaatgggagattggtatggaaatcaatacaaatgtgaagagagaggagttggcgaagctgatcaatg |
128 |
Q |
| |
|
||||||||| ||||||||||||||||||| || ||||||||||||| | |||||| ||| | |||||||||| || ||| ||| |||| || |||| | |
|
|
| T |
4461365 |
gatcagccagcaaactgtagatttatttgcaacaaatgggagattggacttgaaatcgataaagatgtgaagagggatgaggtggagaagttggtcaacg |
4461266 |
T |
|
| Q |
129 |
aagtgatagccggagataaaggaaagaagatgaggcaaaaggccatggagttgaagaaga |
188 |
Q |
| |
|
|| |||| | ||||| | |||||||||||||||||||||| |||||| || ||||||| |
|
|
| T |
4461265 |
aattgatggttggagagattggaaagaagatgaggcaaaaggtcatggaattcaagaaga |
4461206 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr6; HSP #26
Raw Score: 52; E-Value: 6e-21
Query Start/End: Original strand, 29 - 168
Target Start/End: Complemental strand, 4571214 - 4571075
Alignment:
| Q |
29 |
gatcagccaacaaactgtagatttatttgtaatgaatgggagattggtatggaaatcaatacaaatgtgaagagagaggagttggcgaagctgatcaatg |
128 |
Q |
| |
|
||||||||| |||||||||||| ||| || ||| |||||||||||| || |||||| |||| |||||||||||| | ||| ||| ||| || |||||| |
|
|
| T |
4571214 |
gatcagccagcaaactgtagatatatctgcaatacatgggagattggaatcgaaatcgatactaatgtgaagagaaatgaggtggagaatttggtcaatg |
4571115 |
T |
|
| Q |
129 |
aagtgatagccggagataaaggaaagaagatgaggcaaaa |
168 |
Q |
| |
|
|| |||| | |||||||||||||||||||||||| |||| |
|
|
| T |
4571114 |
aattgatggtgggagataaaggaaagaagatgaggaaaaa |
4571075 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr6; HSP #27
Raw Score: 51; E-Value: 2e-20
Query Start/End: Original strand, 33 - 135
Target Start/End: Complemental strand, 4457832 - 4457730
Alignment:
| Q |
33 |
agccaacaaactgtagatttatttgtaatgaatgggagattggtatggaaatcaatacaaatgtgaagagagaggagttggcgaagctgatcaatgaagt |
132 |
Q |
| |
|
||||||||| |||||||||||||| |||||||| |||||||| ||||||||| ||||||||||||||||||| ||| ||| |||| | |||||||| | |
|
|
| T |
4457832 |
agccaacaagttgtagatttatttgcaatgaatgagagattgggatggaaatcgatacaaatgtgaagagagatgaggtggagaagttagtcaatgaatt |
4457733 |
T |
|
| Q |
133 |
gat |
135 |
Q |
| |
|
||| |
|
|
| T |
4457732 |
gat |
4457730 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr6; HSP #28
Raw Score: 50; E-Value: 9e-20
Query Start/End: Original strand, 71 - 188
Target Start/End: Complemental strand, 4579632 - 4579515
Alignment:
| Q |
71 |
attggtatggaaatcaatacaaatgtgaagagagaggagttggcgaagctgatcaatgaagtgatagccggagataaaggaaagaagatgaggcaaaagg |
170 |
Q |
| |
|
||||| || |||||| | || |||||||||||||||||| ||| ||||||| | |||||| |||| | ||||| |||| |||||||||||||||||||| |
|
|
| T |
4579632 |
attggaattgaaatcgacactaatgtgaagagagaggaggtggagaagctggttaatgaattgatggtgggagagaaagcaaagaagatgaggcaaaagg |
4579533 |
T |
|
| Q |
171 |
ccatggagttgaagaaga |
188 |
Q |
| |
|
| || ||||||||||||| |
|
|
| T |
4579532 |
caattgagttgaagaaga |
4579515 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr6; HSP #29
Raw Score: 39; E-Value: 0.0000000000003
Query Start/End: Original strand, 29 - 199
Target Start/End: Complemental strand, 4493197 - 4493027
Alignment:
| Q |
29 |
gatcagccaacaaactgtagatttatttgtaatgaatgggagattggtatggaaatcaatacaaatgtgaagagagaggagttggcgaagctgatcaatg |
128 |
Q |
| |
|
||||||||||||||||||||||| ||||| ||||||| ||||||||| | |||||| ||| ||||| || ||||| | ||| ||| ||| |||||| |
|
|
| T |
4493197 |
gatcagccaacaaactgtagattgatttgcaatgaattggagattggagtagaaatcgataggaatgttaatagagaaaatgtggagaatctggtcaatg |
4493098 |
T |
|
| Q |
129 |
aagtgatagccggagataaaggaaagaagatgaggcaaaaggccatggagttgaagaagatggcaaaggag |
199 |
Q |
| |
|
| | || | ||||| |||||||| ||||||||| ||| |||| ||||||||| |||| |||| ||||| |
|
|
| T |
4493097 |
agattatggttggagagaaaggaaacaagatgaggagaaaagccacggagttgaaaaagaaggcagaggag |
4493027 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr6; HSP #30
Raw Score: 37; E-Value: 0.000000000005
Query Start/End: Original strand, 29 - 169
Target Start/End: Complemental strand, 4557367 - 4557227
Alignment:
| Q |
29 |
gatcagccaacaaactgtagatttatttgtaatgaatgggagattggtatggaaatcaatacaaatgtgaagagagaggagttggcgaagctgatcaatg |
128 |
Q |
| |
|
||||||||| ||||||| |||| |||||| ||| |||||||||||| |||||||| | || |||||||||||||| ||| | | ||| || |||||| |
|
|
| T |
4557367 |
gatcagccagcaaactgcagatatatttgcaatacatgggagattggcatggaaattgacaccaatgtgaagagagatgaggtagagaatttggtcaatg |
4557268 |
T |
|
| Q |
129 |
aagtgatagccggagataaaggaaagaagatgaggcaaaag |
169 |
Q |
| |
|
|| |||| | || || ||||||||||||||| || ||||| |
|
|
| T |
4557267 |
aattgatggagggggagaaaggaaagaagatgtggaaaaag |
4557227 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr8 (Bit Score: 112; Significance: 9e-57; HSPs: 3)
Name: chr8
Description:
Target: chr8; HSP #1
Raw Score: 112; E-Value: 9e-57
Query Start/End: Original strand, 29 - 224
Target Start/End: Complemental strand, 1674468 - 1674273
Alignment:
| Q |
29 |
gatcagccaacaaactgtagatttatttgtaatgaatgggagattggtatggaaatcaatacaaatgtgaagagagaggagttggcgaagctgatcaatg |
128 |
Q |
| |
|
||||||||||||||||||||||||||||||||||||||| |||||||||||||||| |||| |||||||||||||||| |||| |||||| ||||||| |
|
|
| T |
1674468 |
gatcagccaacaaactgtagatttatttgtaatgaatggaagattggtatggaaattgatacgaatgtgaagagagagggtttggagaagcttatcaatg |
1674369 |
T |
|
| Q |
129 |
aagtgatagccggagataaaggaaagaagatgaggcaaaaggccatggagttgaagaagatggcaaaggagagcactagattaggtggttgttcat |
224 |
Q |
| |
|
|| |||| | ||||| || ||||| ||||||||||||||||||||||| |||||||||| |||| |||||| ||||||| |||||||||||||| |
|
|
| T |
1674368 |
aattgatggtgggagagaatggaaaaaagatgaggcaaaaggccatggaattgaagaagaaggcagaggagaacactagaccaggtggttgttcat |
1674273 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr8; HSP #2
Raw Score: 53; E-Value: 1e-21
Query Start/End: Original strand, 29 - 169
Target Start/End: Original strand, 16686157 - 16686297
Alignment:
| Q |
29 |
gatcagccaacaaactgtagatttatttgtaatgaatgggagattggtatggaaatcaatacaaatgtgaagagagaggagttggcgaagctgatcaatg |
128 |
Q |
| |
|
||||||||| |||| || |||| |||||| ||||||||||||||||| |||||||| | || |||||||||||||| ||| ||| ||| || |||||| |
|
|
| T |
16686157 |
gatcagccagcaaaatgcagatatatttgcaatgaatgggagattggcatggaaattgacaccaatgtgaagagagatgaggtggagaaattggtcaatg |
16686256 |
T |
|
| Q |
129 |
aagtgatagccggagataaaggaaagaagatgaggcaaaag |
169 |
Q |
| |
|
|| |||| | ||||| |||||||||||||||||| ||||| |
|
|
| T |
16686257 |
aattgatggtgggagagaaaggaaagaagatgaggaaaaag |
16686297 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr8; HSP #3
Raw Score: 43; E-Value: 0.000000000000001
Query Start/End: Original strand, 29 - 199
Target Start/End: Original strand, 20863733 - 20863903
Alignment:
| Q |
29 |
gatcagccaacaaactgtagatttatttgtaatgaatgggagattggtatggaaatcaatacaaatgtgaagagagaggagttggcgaagctgatcaatg |
128 |
Q |
| |
|
|||||||| |||||||| |||| ||||| || ||||||||||||| || ||||| | || ||||| |||||||||||| ||| || |||| | |||| |
|
|
| T |
20863733 |
gatcagccgacaaactgcagatacatttgcaacaaatgggagattgggatcgaaattgacaccaatgtcaagagagaggaggtggagatgctggtaaatg |
20863832 |
T |
|
| Q |
129 |
aagtgatagccggagataaaggaaagaagatgaggcaaaaggccatggagttgaagaagatggcaaaggag |
199 |
Q |
| |
|
|| |||| | ||||| ||||||| || ||||||||||||| | | ||||||||||||| |||| ||||| |
|
|
| T |
20863833 |
aattgatggtgggagagaaaggaaggaggatgaggcaaaagacaaatgagttgaagaagaaggcagaggag |
20863903 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr3 (Bit Score: 112; Significance: 9e-57; HSPs: 1)
Name: chr3
Description:
Target: chr3; HSP #1
Raw Score: 112; E-Value: 9e-57
Query Start/End: Original strand, 29 - 224
Target Start/End: Complemental strand, 1281356 - 1281161
Alignment:
| Q |
29 |
gatcagccaacaaactgtagatttatttgtaatgaatgggagattggtatggaaatcaatacaaatgtgaagagagaggagttggcgaagctgatcaatg |
128 |
Q |
| |
|
|||||||||||| |||||||||||||||||||||||||| ||||||||||||||||| ||||||||||||||||||||||| |||| ||| ||||||||| |
|
|
| T |
1281356 |
gatcagccaacagactgtagatttatttgtaatgaatggaagattggtatggaaatcgatacaaatgtgaagagagaggaggtggctaagttgatcaatg |
1281257 |
T |
|
| Q |
129 |
aagtgatagccggagataaaggaaagaagatgaggcaaaaggccatggagttgaagaagatggcaaaggagagcactagattaggtggttgttcat |
224 |
Q |
| |
|
|| |||||||||| ||| |||||||||| ||||| ||||||||||||| ||||||||| ||| |||||| ||||||| ||||||||||||| |
|
|
| T |
1281256 |
aattgatagccggggatgaaggaaagaatatgagagaaaaggccatggaattgaagaaggcggcggaggagaacactagaccgggtggttgttcat |
1281161 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr5 (Bit Score: 108; Significance: 2e-54; HSPs: 2)
Name: chr5
Description:
Target: chr5; HSP #1
Raw Score: 108; E-Value: 2e-54
Query Start/End: Original strand, 29 - 224
Target Start/End: Original strand, 27999989 - 28000184
Alignment:
| Q |
29 |
gatcagccaacaaactgtagatttatttgtaatgaatgggagattggtatggaaatcaatacaaatgtgaagagagaggagttggcgaagctgatcaatg |
128 |
Q |
| |
|
||||||||||||||||||||||||||||||||||||||| |||||||||||||||| ||| |||||||||| |||||| |||| |||||| ||||||| |
|
|
| T |
27999989 |
gatcagccaacaaactgtagatttatttgtaatgaatggaagattggtatggaaattgatatgaatgtgaagatagaggatttggagaagcttatcaatg |
28000088 |
T |
|
| Q |
129 |
aagtgatagccggagataaaggaaagaagatgaggcaaaaggccatggagttgaagaagatggcaaaggagagcactagattaggtggttgttcat |
224 |
Q |
| |
|
|| |||| | ||||| || ||||| |||||||||||||||||||||||||||||||| | |||| |||||| ||||||| |||||||||||||| |
|
|
| T |
28000089 |
aattgatggtgggagagaatggaaaaaagatgaggcaaaaggccatggagttgaagaaaaaggcagaggagaacactagaccaggtggttgttcat |
28000184 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr5; HSP #2
Raw Score: 60; E-Value: 1e-25
Query Start/End: Original strand, 29 - 224
Target Start/End: Complemental strand, 24103241 - 24103046
Alignment:
| Q |
29 |
gatcagccaacaaactgtagatttatttgtaatgaatgggagattggtatggaaatcaatacaaatgtgaagagagaggagttggcgaagctgatcaatg |
128 |
Q |
| |
|
||||| ||||||||||||||||||||||| |||||||||||||||| | |||||| ||||||||||||||||||| || | | |||| | |||||| |
|
|
| T |
24103241 |
gatcaaccaacaaactgtagatttatttgctatgaatgggagattggactcgaaatcgatacaaatgtgaagagagatgacgtcgagaagttagtcaatg |
24103142 |
T |
|
| Q |
129 |
aagtgatagccggagataaaggaaagaagatgaggcaaaaggccatggagttgaagaagatggcaaaggagagcactagattaggtggttgttcat |
224 |
Q |
| |
|
|| |||| | ||||| || ||||||| ||||| |||||||| | ||||||| ||||||| |||| | |||| ||| |||| ||||||| ||||| |
|
|
| T |
24103141 |
aattgatggtgggagagaacggaaagacgatgaagcaaaaggtcttggagttcaagaagaaggcagaagagaacacaagatctggtggtttttcat |
24103046 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: scaffold0288 (Bit Score: 84; Significance: 5e-40; HSPs: 1)
Name: scaffold0288
Description:
Target: scaffold0288; HSP #1
Raw Score: 84; E-Value: 5e-40
Query Start/End: Original strand, 29 - 224
Target Start/End: Original strand, 3609 - 3804
Alignment:
| Q |
29 |
gatcagccaacaaactgtagatttatttgtaatgaatgggagattggtatggaaatcaatacaaatgtgaagagagaggagttggcgaagctgatcaatg |
128 |
Q |
| |
|
||||||||||||||||||||||||||||| || |||||||||||||| | |||||| ||| ||||||||||||| ||| ||| |||||| |||||| |
|
|
| T |
3609 |
gatcagccaacaaactgtagatttatttgcaacgaatgggagattggacttgaaatcgatatggatgtgaagagagatgaggtggagaagctagtcaatg |
3708 |
T |
|
| Q |
129 |
aagtgatagccggagataaaggaaagaagatgaggcaaaaggccatggagttgaagaagatggcaaaggagagcactagattaggtggttgttcat |
224 |
Q |
| |
|
|| ||| | ||||| ||||||||||||||||||||||||||| ||||||| ||||||| |||| |||||| ||||||| ||||||| |||||| |
|
|
| T |
3709 |
aattgacggtgggagagaaaggaaagaagatgaggcaaaaggccgtggagttaaagaagaaggcagaggagaacactagaccaggtggtcgttcat |
3804 |
T |
|
Back To:
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Target: scaffold0477 (Bit Score: 69; Significance: 4e-31; HSPs: 1)
Name: scaffold0477
Description:
Target: scaffold0477; HSP #1
Raw Score: 69; E-Value: 4e-31
Query Start/End: Original strand, 64 - 200
Target Start/End: Original strand, 4611 - 4747
Alignment:
| Q |
64 |
atgggagattggtatggaaatcaatacaaatgtgaagagagaggagttggcgaagctgatcaatgaagtgatagccggagataaaggaaagaagatgagg |
163 |
Q |
| |
|
|||||||| |||||||||||| |||| ||||||||||||||| || | |||| ||||||||||| |||| | ||||||||||||| |||||||||| |
|
|
| T |
4611 |
atgggagactggtatggaaattgatactaatgtgaagagagagaaggtaacgaatatgatcaatgaattgatgtcgggagataaaggaatgaagatgagg |
4710 |
T |
|
| Q |
164 |
caaaaggccatggagttgaagaagatggcaaaggaga |
200 |
Q |
| |
|
||||||||||||||||||||||||| |||| |||||| |
|
|
| T |
4711 |
caaaaggccatggagttgaagaagaaggcagaggaga |
4747 |
T |
|
Back To:
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Target: chr7 (Bit Score: 68; Significance: 2e-30; HSPs: 1)
Name: chr7
Description:
Target: chr7; HSP #1
Raw Score: 68; E-Value: 2e-30
Query Start/End: Original strand, 29 - 168
Target Start/End: Complemental strand, 3086662 - 3086523
Alignment:
| Q |
29 |
gatcagccaacaaactgtagatttatttgtaatgaatgggagattggtatggaaatcaatacaaatgtgaagagagaggagttggcgaagctgatcaatg |
128 |
Q |
| |
|
||||| |||| ||||||||||| ||| || ||| |||||||||||| || |||||| |||| |||||||||||||||||| | | |||||||||||||| |
|
|
| T |
3086662 |
gatcaaccaataaactgtagatatatctgcaatatatgggagattggaattgaaatcgatactaatgtgaagagagaggaggtcgagaagctgatcaatg |
3086563 |
T |
|
| Q |
129 |
aagtgatagccggagataaaggaaagaagatgaggcaaaa |
168 |
Q |
| |
|
|| |||| | ||||||||||||||||||||||||||||| |
|
|
| T |
3086562 |
aattgatggtgggagataaaggaaagaagatgaggcaaaa |
3086523 |
T |
|
Back To:
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Target: scaffold0475 (Bit Score: 34; Significance: 0.0000000003; HSPs: 1)
Name: scaffold0475
Description:
Target: scaffold0475; HSP #1
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 36 - 109
Target Start/End: Original strand, 3581 - 3654
Alignment:
| Q |
36 |
caacaaactgtagatttatttgtaatgaatgggagattggtatggaaatcaatacaaatgtgaagagagaggag |
109 |
Q |
| |
|
||||||||||||||| ||||| ||||||||||||||||| | ||||| || | |||||||||||||||||| |
|
|
| T |
3581 |
caacaaactgtagatgcatttggaatgaatgggagattggaagtgaaatagattccaatgtgaagagagaggag |
3654 |
T |
|
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[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
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