View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
|
Alignment Overview
Query: NF14628_high_7 (Length: 265)
Name: NF14628_high_7
Description: NF14628
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF14628_high_7 |
 | |
|
Alignment Details
Target: chr7 (Bit Score: 162; Significance: 2e-86; HSPs: 13)
Name: chr7
Description:
Target: chr7; HSP #1
Raw Score: 162; E-Value: 2e-86
Query Start/End: Original strand, 4 - 264
Target Start/End: Original strand, 32065197 - 32065449
Alignment:
| Q |
4 |
atacagataaataaagtacttatctctctcattatttaatacggcgtaaaggtcaaacgtcagatcattaacactaaattaaagtaaaatgtatttcgtc |
103 |
Q |
| |
|
||||||| |||||| ||||||||||| ||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||| |
|
|
| T |
32065197 |
atacagacaaataacgtacttatctc--tcattatttaatacggcgtaaaggtcaaacgtcagatcagtaacactaaattaaagtaaaatgtatttcgtc |
32065294 |
T |
|
| Q |
104 |
cgaattcataacaaatacatttgactaactccttaagaaagtggacatatgtttgattccttacaatcgtgcatgaatgatatttgattggaaggagaga |
203 |
Q |
| |
|
||||||| |||||||||||||||||||||||||||||||||||||| |||||||||||||||| ||||||||||||| | ||||| |||||||||| || |
|
|
| T |
32065295 |
tgaattcagaacaaatacatttgactaactccttaagaaagtggacaaatgtttgattccttactatcgtgcatgaat-aaatttggttggaaggaggga |
32065393 |
T |
|
| Q |
204 |
gctcactttgtgtgtcatcatttactcaccgacaccaaataatatggtaatccagtcaata |
264 |
Q |
| |
|
|||| ||||||| |||| ||||| ||||||| |||||||||||||||||||||||| |
|
|
| T |
32065394 |
actca-----tgtgtcaccattgactcaacgacaccgaataatatggtaatccagtcaata |
32065449 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr7; HSP #2
Raw Score: 154; E-Value: 9e-82
Query Start/End: Original strand, 28 - 265
Target Start/End: Original strand, 32066245 - 32066477
Alignment:
| Q |
28 |
tctctcattatttaatacggcgtaaaggtcaaacgtcagatcattaacactaaattaaagtaaaatgtatttcgtccgaattcataacaaatacatttga |
127 |
Q |
| |
|
|||||||||||||||||||||||||||||||||||||| || |||||| ||||||||||||||||| ||||||||||| | |||||| |||||| |
|
|
| T |
32066245 |
tctctcattatttaatacggcgtaaaggtcaaacgtcatatgggtaacac-----taaagtaaaatgtatttggtccgaattcagatcaaataaatttga |
32066339 |
T |
|
| Q |
128 |
ctaactccttaagaaagtggacatatgtttgattccttacaatcgtgcatgaatgatatttgattggaaggagagagctcactttgtgtgtcatcattta |
227 |
Q |
| |
|
|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||| ||||||||||||||| |||||| |
|
|
| T |
32066340 |
ctaactccttaagaaagtggacatatgtttgattccttacaatcgtgcatgaatgatatttgattgaaaggagagaattcactttgtgtgtcagcattta |
32066439 |
T |
|
| Q |
228 |
ctcaccgacaccaaataatatggtaatccagtcaataa |
265 |
Q |
| |
|
||||| |||||| |||||| |||||||||||| ||||| |
|
|
| T |
32066440 |
ctcactgacaccgaataatgtggtaatccagtgaataa |
32066477 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr7; HSP #3
Raw Score: 146; E-Value: 5e-77
Query Start/End: Original strand, 28 - 265
Target Start/End: Original strand, 32065474 - 32065706
Alignment:
| Q |
28 |
tctctcattatttaatacggcgtaaaggtcaaacgtcagatcattaacactaaattaaagtaaaatgtatttcgtccgaattcataacaaatacatttga |
127 |
Q |
| |
|
||||||||||||||||||| ||||||||||||||||||||| | | |||| ||||||||||| ||||| ||||||||||| |||||||| |||||| |
|
|
| T |
32065474 |
tctctcattatttaatacgacgtaaaggtcaaacgtcagatgagttacac-----taaagtaaaatttatttggtccgaattcaaaacaaataaatttga |
32065568 |
T |
|
| Q |
128 |
ctaactccttaagaaagtggacatatgtttgattccttacaatcgtgcatgaatgatatttgattggaaggagagagctcactttgtgtgtcatcattta |
227 |
Q |
| |
|
|||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||| ||||||||||| | |||| ||||||||||| |||||| |
|
|
| T |
32065569 |
ctaactccttaagaaagtgggcatatgtttgattccttacaatcgtgcatgaatgatatttggttggaaggagataactcattttgtgtgtcaccattta |
32065668 |
T |
|
| Q |
228 |
ctcaccgacaccaaataatatggtaatccagtcaataa |
265 |
Q |
| |
|
|||||||| | | ||||||||||||||||| ||||||| |
|
|
| T |
32065669 |
ctcaccgaaatcgaataatatggtaatccaatcaataa |
32065706 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr7; HSP #4
Raw Score: 131; E-Value: 5e-68
Query Start/End: Original strand, 4 - 265
Target Start/End: Original strand, 32065711 - 32065965
Alignment:
| Q |
4 |
atacagataaataaagtacttatctctctcattatttaatacggcgtaaaggtcaaacgtcagatcattaacactaaattaaagtaaaatgtatttcgtc |
103 |
Q |
| |
|
|||||||||||||||||||||| ||||||||||||||||| || |||||||| |||||||| | | |||||| ||||||||||||||||| || |
|
|
| T |
32065711 |
atacagataaataaagtactta--tctctcattatttaatatggtgtaaaggtaaaacgtcatgtgagtaacac-----taaagtaaaatgtatttggta |
32065803 |
T |
|
| Q |
104 |
cgaattcataacaaatacatttgactaactccttaagaaagtggacatatgtttgattccttacaatcgtgcatgaatgatatttgattggaaggagaga |
203 |
Q |
| |
|
||||||| | |||||| |||||||||||||| |||||||||||||||| |||||||||||||||||||||||||||| | ||||| |||||| || ||| |
|
|
| T |
32065804 |
tgaattcagatcaaataaatttgactaactccataagaaagtggacataagtttgattccttacaatcgtgcatgaataaaatttggttggaatgaaaga |
32065903 |
T |
|
| Q |
204 |
gctcactttgtgtgtcatcatttactcaccgacaccaaataatatggtaatccagtcaataa |
265 |
Q |
| |
|
|||||||||||||||| |||||||||||||||| | ||||||||| ||||||||||||||| |
|
|
| T |
32065904 |
actcactttgtgtgtcaccatttactcaccgacatcgaataatatgataatccagtcaataa |
32065965 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr7; HSP #5
Raw Score: 126; E-Value: 5e-65
Query Start/End: Original strand, 12 - 264
Target Start/End: Original strand, 32066494 - 32066733
Alignment:
| Q |
12 |
aaataaagtacttatctctctcattatttaatacggcgtaaaggtcaaacgtcagatcattaacactaaattaaagtaaaatgtatttcgtccgaattca |
111 |
Q |
| |
|
|||||||||||||||||||| ||||||||||||||||||||| ||||||||||||| | |||||||||| |||||||| |||||||||||||||| |
|
|
| T |
32066494 |
aaataaagtacttatctctc--attatttaatacggcgtaaagttcaaacgtcagatgagtaacactaaa-----gtaaaatgcatttcgtccgaattca |
32066586 |
T |
|
| Q |
112 |
taacaaatacatttgactaactccttaagaaagtggacatatgtttgattccttacaatcgtgcatgaatgatatttgattggaaggagagagctcactt |
211 |
Q |
| |
|
|||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| | ||||| |||||||||| || |||| |
|
|
| T |
32066587 |
gaacatatacatttgactaactccttaagaaagtggacatatgtttgattccttacaatcgtgcatgaat-aaatttggttggaaggagggaactca--- |
32066682 |
T |
|
| Q |
212 |
tgtgtgtcatcatttactcaccgacaccaaataatatggtaatccagtcaata |
264 |
Q |
| |
|
||| ||| |||| ||||| |||||| |||||||||||| ||||||||||| |
|
|
| T |
32066683 |
--tgtctcaccattgactcagtgacaccgaataatatggtactccagtcaata |
32066733 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr7; HSP #6
Raw Score: 114; E-Value: 7e-58
Query Start/End: Original strand, 12 - 264
Target Start/End: Original strand, 32065981 - 32066220
Alignment:
| Q |
12 |
aaataaagtacttatctctctcattatttaatacggcgtaaaggtcaaacgtcagatcattaacactaaattaaagtaaaatgtatttcgtccgaattca |
111 |
Q |
| |
|
|||||||||||||||||||| ||||||||||| ||||||||||||||||||||||| | |||||||||| ||||||||||||||||||||||||| |
|
|
| T |
32065981 |
aaataaagtacttatctctc--attatttaatatggcgtaaaggtcaaacgtcagatgagtaacactaaa-----gtaaaatgtatttcgtccgaattca |
32066073 |
T |
|
| Q |
112 |
taacaaatacatttgactaactccttaagaaagtggacatatgtttgattccttacaatcgtgcatgaatgatatttgattggaaggagagagctcactt |
211 |
Q |
| |
|
|| |||||||||||||||||||||||||||||||||||||||||||| | ||||||||||| ||| ||| | ||||| |||||||||| || |||| |
|
|
| T |
32066074 |
gaaaaaatacatttgactaactccttaagaaagtggacatatgtttgagtacttacaatcgtacattaat-aaatttgtttggaaggagggaactca--- |
32066169 |
T |
|
| Q |
212 |
tgtgtgtcatcatttactcaccgacaccaaataatatggtaatccagtcaata |
264 |
Q |
| |
|
||||||| |||| ||||| | ||| |||||||||||||||||||||||| |
|
|
| T |
32066170 |
--tgtgtcaccattgactcattggcacagaataatatggtaatccagtcaata |
32066220 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr7; HSP #7
Raw Score: 109; E-Value: 6e-55
Query Start/End: Original strand, 4 - 265
Target Start/End: Original strand, 32073975 - 32074228
Alignment:
| Q |
4 |
atacagataaataaagtacttatctctctcattatttaatacggcgtaaaggtcaaacgtcagatcattaacactaaattaaagtaaaatgtatttcgtc |
103 |
Q |
| |
|
||||||| |||| |||||||||||||| ||||||||||||||| ||| |||||||||||| || | |||||||||| ||||||||||| | ||| |
|
|
| T |
32073975 |
atacagacaaatggagtacttatctctc--attatttaatacggcataatggtcaaacgtcatatgagtaacactaaa-----gtaaaatgtatgtggtc |
32074067 |
T |
|
| Q |
104 |
cgaattcataacaaatacat-ttgactaactccttaagaaagtggacatatgtttgattccttacaatcgtgcatgaatgatatttgattggaaggagag |
202 |
Q |
| |
|
|||||||| | ||||||||| |||||||||||||| ||||||| |||||||||||| |||||||| |||||||||||| | ||||| |||||||||||| |
|
|
| T |
32074068 |
cgaattcagatcaaatacatattgactaactccttgtgaaagtgaacatatgtttgactccttacattcgtgcatgaataaaatttggttggaaggagag |
32074167 |
T |
|
| Q |
203 |
agctcactttgtgtgtcatcatttactcaccgacaccaaataatatggtaatccagtcaataa |
265 |
Q |
| |
|
| ||||||||||||||| ||| |||||||||||| ||||||||||||||| ||||||||| |
|
|
| T |
32074168 |
a--tcactttgtgtgtcactattgactcaccgacactgaataatatggtaatctagtcaataa |
32074228 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr7; HSP #8
Raw Score: 98; E-Value: 2e-48
Query Start/End: Original strand, 4 - 192
Target Start/End: Original strand, 32072885 - 32073066
Alignment:
| Q |
4 |
atacagataaataaagtacttatctctctcattatttaatacggcgtaaaggtcaaacgtcagatcattaacactaaattaaagtaaaatgtatttcgtc |
103 |
Q |
| |
|
||||||| ||||||||||||||||||| |||||||||||||||||||||||||||| ||||| | |||||||| | ||||||||||||| ||| |
|
|
| T |
32072885 |
atacagacaaataaagtacttatctctt--attatttaatacggcgtaaaggtcaaactgcagatgagtaacactaca-----gtaaaatgtatttggtc |
32072977 |
T |
|
| Q |
104 |
cgaattcataacaaatacatttgactaactccttaagaaagtggacatatgtttgattccttacaatcgtgcatgaatgatatttgatt |
192 |
Q |
| |
|
|||||||| | |||||||||||||||||||||||||||||||||||||||||||||||| ||||| | |||||||||| | |||||||| |
|
|
| T |
32072978 |
cgaattcagatcaaatacatttgactaactccttaagaaagtggacatatgtttgattctttacactagtgcatgaataaaatttgatt |
32073066 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr7; HSP #9
Raw Score: 98; E-Value: 2e-48
Query Start/End: Original strand, 4 - 265
Target Start/End: Original strand, 32073714 - 32073970
Alignment:
| Q |
4 |
atacagataaataaagtacttatctctctcattatttaatacggcgtaaaggtcaaacgtcagatcattaacactaaattaaagtaaaatgtatttcgtc |
103 |
Q |
| |
|
||||||| |||| ||||||||||||||| |||||||||||||||||||||||||||||||| || | ||||||| | ||||||||||| | || |
|
|
| T |
32073714 |
atacagacaaatgaagtacttatctctc--attatttaatacggcgtaaaggtcaaacgtcatatgagtaacacttat-----gtaaaatgtatgttgtt |
32073806 |
T |
|
| Q |
104 |
cgaattcataacaaatacattt-gactaactccttaagaaagtggacatatgtttgattccttacaatcgtgcatg---aatgatatttgattggaagga |
199 |
Q |
| |
|
||| | | | ||||||||||| ||||||||||||| ||||||||||||||||||||||||||||| ||||||||| | | | ||||| ||||||||| |
|
|
| T |
32073807 |
tgaacttagatcaaatacattttgactaactccttatgaaagtggacatatgtttgattccttacactcgtgcatgattattaaaatttggttggaagga |
32073906 |
T |
|
| Q |
200 |
gagagctcactttgtgtgtcatcatttactcaccgacaccaaataatatggtaatccagtcaataa |
265 |
Q |
| |
|
|||| ||||||||||||||| ||| |||||||||||| ||||||||||||| |||||||||||| |
|
|
| T |
32073907 |
gaga--tcactttgtgtgtcactattgactcaccgacactaaataatatggtattccagtcaataa |
32073970 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr7; HSP #10
Raw Score: 80; E-Value: 1e-37
Query Start/End: Original strand, 130 - 265
Target Start/End: Original strand, 32065056 - 32065191
Alignment:
| Q |
130 |
aactccttaagaaagtggacatatgtttgattccttacaatcgtgcatgaatgatatttgattggaaggagagagctcactttgtgtgtcatcatttact |
229 |
Q |
| |
|
||||||||||||||||||| ||||||||||||| ||||| |||||||||||| | ||||| ||||||| ||||| ||||||| |||||||| |||| ||| |
|
|
| T |
32065056 |
aactccttaagaaagtggatatatgtttgattctttacactcgtgcatgaataaaatttggttggaagaagagaactcacttcgtgtgtcaccattgact |
32065155 |
T |
|
| Q |
230 |
caccgacaccaaataatatggtaatccagtcaataa |
265 |
Q |
| |
|
||| |||||| ||| ||||||||||||||||||||| |
|
|
| T |
32065156 |
cactgacaccgaattatatggtaatccagtcaataa |
32065191 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr7; HSP #11
Raw Score: 55; E-Value: 1e-22
Query Start/End: Original strand, 28 - 130
Target Start/End: Original strand, 32066758 - 32066855
Alignment:
| Q |
28 |
tctctcattatttaatacggcgtaaaggtcaaacgtcagatcattaacactaaattaaagtaaaatgtatttcgtccgaattcataacaaatacatttga |
127 |
Q |
| |
|
||||||||||||||||||||||||||| ||||||||||||| | |||||| ||||||||||||||||| ||||||||||| | || |||||||||| |
|
|
| T |
32066758 |
tctctcattatttaatacggcgtaaagttcaaacgtcagatgagtaacac-----taaagtaaaatgtatttggtccgaattcagatcatatacatttga |
32066852 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr7; HSP #12
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 185 - 265
Target Start/End: Original strand, 32073630 - 32073710
Alignment:
| Q |
185 |
atttgattggaaggagagagctcactttgtgtgtcatcatttactcaccgacaccaaataatatggtaatccagtcaataa |
265 |
Q |
| |
|
||||| ||||||||| || || ||||||||||||| |||| ||||||||||||| |||||| |||||||||| ||||||| |
|
|
| T |
32073630 |
atttggttggaaggattgaactgactttgtgtgtcaccattaactcaccgacaccgaataatctggtaatccattcaataa |
32073710 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr7; HSP #13
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 206 - 265
Target Start/End: Original strand, 32072822 - 32072881
Alignment:
| Q |
206 |
tcactttgtgtgtcatcatttactcaccgacaccaaataatatggtaatccagtcaataa |
265 |
Q |
| |
|
||||||||||||||| ||| |||||| |||||| ||||||||||||||| ||||||||| |
|
|
| T |
32072822 |
tcactttgtgtgtcacaattgactcactgacaccgaataatatggtaatctagtcaataa |
32072881 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
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