View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF14629_high_16 (Length: 319)
Name: NF14629_high_16
Description: NF14629
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF14629_high_16 |
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| [»] chr8 (1 HSPs) |
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Alignment Details
Target: chr8 (Bit Score: 261; Significance: 1e-145; HSPs: 1)
Name: chr8
Description:
Target: chr8; HSP #1
Raw Score: 261; E-Value: 1e-145
Query Start/End: Original strand, 12 - 319
Target Start/End: Complemental strand, 2067409 - 2067102
Alignment:
| Q |
12 |
cacttccatcatattgatttatagtaaaatttgaatgattaaagactatcaagnnnnnnnnnnnnnccttatagttttaatttttaatcagtaaataaat |
111 |
Q |
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| T |
2067409 |
cactgccatcatattgatttatagtaaaatttgaatgattaaagactatcaagtttttgtttttttccttatagttttaatttttaatcagtaaataaat |
2067310 |
T |
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| Q |
112 |
gaatgaagcataattcatagtattactacaacaattatatcggcatgtaggatttgaaagagtgaacattattccactcataaagattgttacttctatt |
211 |
Q |
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| T |
2067309 |
gaatgaagcataattcatagtattactacaacaattatatcggcatgtaggatttgaaagagtgaacattattccactcataaagattgttacttctatt |
2067210 |
T |
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| Q |
212 |
tagtactaaatttagtttatacgaatcatatgatttttcttaacaaaagtgaaactactactctatatgaaaagcgtaaagcgacatttttcctgaattt |
311 |
Q |
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|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
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| T |
2067209 |
tagtactaaatttagtttatacgaatcatatgatttttcttaacaaaagtgaaactactactctatatgaaaagcgtaaagcgacatttttcctgaattt |
2067110 |
T |
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| Q |
312 |
gccattac |
319 |
Q |
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||||||| |
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| T |
2067109 |
accattac |
2067102 |
T |
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