View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF14629_high_18 (Length: 305)
Name: NF14629_high_18
Description: NF14629
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF14629_high_18 |
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Alignment Details
Target: chr1 (Bit Score: 261; Significance: 1e-145; HSPs: 1)
Name: chr1
Description:
Target: chr1; HSP #1
Raw Score: 261; E-Value: 1e-145
Query Start/End: Original strand, 1 - 276
Target Start/End: Complemental strand, 16012663 - 16012387
Alignment:
| Q |
1 |
ctgaaattacaaagttttggcttcccttgtcgactatacttaactaactgggttcctctttttaatgtaatgaatgccttcacacaaaaacataaaatta |
100 |
Q |
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| T |
16012663 |
ctgaaattacaaagtttcggcttcccttgtcgactatacttaactaactgggttcctctttttaatgtaatgaatgccttcacacaaaaacataaaatta |
16012564 |
T |
|
| Q |
101 |
agtaagtggagcacctaagaaacataatatttagtatatcatatcaagtta-taatcattttgaaattcatattgcagatatgtaaactactatataaat |
199 |
Q |
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||||||||||||||||||| ||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||| |
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| T |
16012563 |
agtaagtggagcacctaagcaacataatatttagtatatcatatcaagttattaatcattttgaaattcatattgcagatatgtaaactactatataaat |
16012464 |
T |
|
| Q |
200 |
tcaatggctacataatccctagaatgatgatgtccagtgaaaaatgaagaacaaacacttaaaacctattcaaacac |
276 |
Q |
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||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
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| T |
16012463 |
tcaatggctacataatccctagaatgatgatgtccagtgaaaaatgaagaacaaacacttaaaacctattcaaacac |
16012387 |
T |
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